Prupe.5G117400_v2.0.a1
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0015660
Physical Location & Seq
Reverse (-)
11893417 .. 11895496
2080 bp
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UTR
Exon/CDS
Intron
Prupe.5G117400.1

Sequence Viewer

Length: 1047 bp
ATGTTGTCAAGAGCCTTAACTGCAAAGCCCAGAAAGAGCCCCAAAAATGAAGATCAAGACCCACAACAAGGCTACACCACCAGCTCGTTCAACGACTACGAAGACTGCATCGTAGGGTTCATGCAGGACCTGCCACTTGTCCGCTGTGGACACGACAGGAAGTGTCTTGGATGTGGGGAAGGGCTGTCCCACTTGACGCTGAGGGGTGTGCTGAGAGGTTCGGTGGGTGTGATAGGGGAGAGCAGGCTGGGGATGACTGAGAAGGTGGTGTTGTTGGGTGGTAGGGTTTGTGCTGTGAAGAGGTTTAGGAAGGTGAGCTGTGGGAGTCGTGACTTTGGGAAGAGAATAGAGCACTTGGCTAAGGTGAGTGAGAAGAGTGAGTATCTTGTGCCTGTCATTGCTTATTTGTATGCTAAGAGGATCAAGTTTGTTCTCTCTGATTACTACCCCATGGGAAGCCTTGCTGACTTGCTTGCTGGTGCTAGGCAACATGGTCACACAGCGTTGGATTGGAACCAAAGGCTGACCATAGTTGTTCATATTGCACGAGCAATTGCATTCATCCATGAGCAATACCCTTCATATGACAAGAAGATGCAGATGAACGTGCATGGGAGCATTAGGGTATGCCATGTGATGGTGAACATCGACTTCTCAGCCTGCTTGTCCGATTATGGATTCACCCAATTGGCGGAGCCGGTCGAAATTCCCAACATGTGGCAAATGATGAAGTCGCCATGCTGGCAGCAAACAACTCCTTACTGTGCTGAACTGAGTCAGAAGAGTGACATTCACAACTTTGGGGTGATACTGCTGGACGTATTGGCAGGACCAAAGGGTTTGAGAATGACAGAAGGCACAAAGGAAGAGAAGGAAGGCCTGATATCAGAATGTGGTTCGGAGTTTTTTGAGTTTGCTGTGAAGGAAGGGAAAGAAAGGAGGCAAGTGTCTGGGGTTTTGGACATTGCCCTTGCATGTACAAGTGCCAAACCAGAGGCTAGGCCTTCTATAAAAGAGATATATTGTTCTCTCTTGGAGATATTGTAA

Protein Analysis

349

Amino Acids

38.89

Weight (kDa)

8.34

Isoelectric Point (pI)

46.29

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015660)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26430
malus_domestica MD06G1104800.v1.1 MD14G1123700.v1.1
prunus_persica Prupe.5G117400_v2.0.a1
pyrus_communis pycom06g09930
rosa_chinensis RchiOBHm_Chr7g0195111
rosa_laevigata RLG00000004145
rosa_multiflora Rmu_co8510033.1_g000001 Rmu_sc0002381.1_g000031
rosa_roxburghii Rroxscaffold_3G00260770
rosa_rugosa Rorug07G0020900
rosa_samantha Rh7AG148200 Rh7BG149000 Rh7CG152400 Rh7DG149300
rosa_wichuraiana Rw7G012650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 138
AccB7I CCANNNNNTGG 2 cut(s) 637, 717
AciI CCGC 2 cut(s) 142, 692
AclWI GGATC 1 cut(s) 428
AcsI RAATTY 1 cut(s) 705
AfaI GTAC 1 cut(s) 979
AfiI CCNNNNNNNGG 4 cut(s) 68, 637, 691, 717
AflIII ACRYGT 1 cut(s) 714
AgsI TTSAA 1 cut(s) 91
AluBI AGCT 2 cut(s) 84, 318
AluI AGCT 2 cut(s) 84, 318
Alw21I GWGCWC 1 cut(s) 354
AlwI GGATC 1 cut(s) 428
AlwNI CAGNNNCTG 1 cut(s) 130
AoxI GGCC 2 cut(s) 877, 1001
ApeKI GCWGC 1 cut(s) 745
ApoI RAATTY 1 cut(s) 705
AspS9I GGNCC 2 cut(s) 127, 830
AsuHPI GGTGA 5 cut(s) 325, 376, 652, 673, 817
AvaII GGWCC 2 cut(s) 127, 830
BanII GRGCYC 1 cut(s) 41
BauI CACGAG 1 cut(s) 546
BbsI GAAGAC 1 cut(s) 108
Bbv12I GWGCWC 1 cut(s) 354
BbvCI CCTCAGC 1 cut(s) 200
BbvI GCAGC 1 cut(s) 757
BccI CCATC 1 cut(s) 631
BfaI CTAG 2 cut(s) 483, 999
BfuAI ACCTGC 1 cut(s) 138
BglI GCCNNNNNGGC 1 cut(s) 742
BisI GCNGC 1 cut(s) 746
BlsI GCNGC 1 cut(s) 747
Bme18I GGWCC 2 cut(s) 127, 830
BmgT120I GGNCC 2 cut(s) 127, 830
BmiI GGNNCC 2 cut(s) 515, 696
BmsI GCATC 2 cut(s) 117, 585
BpiI GAAGAC 1 cut(s) 108
Bpu10I CCTNAGC 2 cut(s) 200, 360
BsaJI CCNNGG 1 cut(s) 450
BsaXI ACNNNNNCTCC 1 cut(s) 1028
Bsc4I CCNNNNNNNGG 4 cut(s) 68, 637, 691, 717
Bse118I RCCGGY 1 cut(s) 697
Bse3DI GCAATG 2 cut(s) 396, 963
BseDI CCNNGG 1 cut(s) 450
BseGI GGATG 3 cut(s) 176, 258, 561
BseLI CCNNNNNNNGG 4 cut(s) 68, 637, 691, 717
BseMI GCAATG 2 cut(s) 396, 963
BseMII CTCAG 5 cut(s) 191, 203, 249, 669, 764
BseXI GCAGC 1 cut(s) 757
BseYI CCCAGC 1 cut(s) 247
Bsh1285I CGRYCG 1 cut(s) 702
BshFI GGCC 2 cut(s) 879, 1003
BsiEI CGRYCG 1 cut(s) 702
BsiHKAI GWGCWC 1 cut(s) 354
BsiSI CCGG 1 cut(s) 698
BslFI GGGAC 1 cut(s) 172
BslI CCNNNNNNNGG 4 cut(s) 68, 637, 691, 717
BsmFI GGGAC 1 cut(s) 172
BsmI GAATGC 1 cut(s) 557
BsnI GGCC 2 cut(s) 879, 1003
Bsp1286I GDGCHC 2 cut(s) 41, 354
Bsp1407I TGTACA 1 cut(s) 977
Bsp143I GATC 2 cut(s) 52, 420
Bsp19I CCATGG 1 cut(s) 450
BspACI CCGC 2 cut(s) 142, 692
BspANI GGCC 2 cut(s) 879, 1003
BspCNI CTCAG 5 cut(s) 192, 204, 250, 668, 765
BspLI GGNNCC 2 cut(s) 515, 696
BspMI ACCTGC 1 cut(s) 138
BspPI GGATC 1 cut(s) 428
BsrDI GCAATG 2 cut(s) 396, 963
BsrFI RCCGGY 1 cut(s) 697
BsrGI TGTACA 1 cut(s) 977
BssAI RCCGGY 1 cut(s) 697
BssECI CCNNGG 1 cut(s) 450
BssMI GATC 2 cut(s) 52, 420
BssSI CACGAG 1 cut(s) 546
BssT1I CCWWGG 1 cut(s) 450
Bst2BI CACGAG 1 cut(s) 546
Bst4CI ACNGT 1 cut(s) 764
Bst6I CTCTTC 5 cut(s) 293, 335, 368, 776, 861
BstAPI GCANNNNNTGC 1 cut(s) 130
BstAUI TGTACA 1 cut(s) 977
BstC8I GCNNGC 4 cut(s) 245, 474, 661, 743
BstDEI CTNAG 7 cut(s) 200, 212, 258, 360, 414, 655, 773
BstDSI CCRYGG 1 cut(s) 450
BstF5I GGATG 3 cut(s) 176, 258, 561
BstKTI GATC 2 cut(s) 55, 423
BstMBI GATC 2 cut(s) 52, 420
BstMCI CGRYCG 1 cut(s) 702
BstMWI GCNNNNNNNGC 3 cut(s) 20, 130, 742
BstNSI RCATGY 2 cut(s) 718, 978
BstV1I GCAGC 1 cut(s) 757
BstV2I GAAGAC 1 cut(s) 108
BsuRI GGCC 2 cut(s) 879, 1003
BtgI CCRYGG 1 cut(s) 450
BtsCI GGATG 3 cut(s) 176, 258, 561
BveI ACCTGC 1 cut(s) 138
Cac8I GCNNGC 4 cut(s) 245, 474, 661, 743
CaiI CAGNNNCTG 1 cut(s) 130
Cfr10I RCCGGY 1 cut(s) 697
Cfr13I GGNCC 2 cut(s) 127, 830
CseI GACGC 1 cut(s) 205
Csp6I GTAC 1 cut(s) 978
CviAII CATG 9 cut(s) 121, 451, 491, 566, 611, 632, 715, 738, 975
CviQI GTAC 1 cut(s) 978
DdeI CTNAG 7 cut(s) 200, 212, 258, 360, 414, 655, 773
DpnI GATC 2 cut(s) 54, 422
DpnII GATC 2 cut(s) 52, 420
Eam1104I CTCTTC 5 cut(s) 293, 335, 368, 776, 861
EarI CTCTTC 5 cut(s) 293, 335, 368, 776, 861
EciI GGCGGA 1 cut(s) 707
Eco130I CCWWGG 1 cut(s) 450
Eco147I AGGCCT 2 cut(s) 879, 1003
Eco24I GRGCYC 1 cut(s) 41
Eco32I GATATC 1 cut(s) 885
Eco47I GGWCC 2 cut(s) 127, 830
EcoO109I RGGNCCY 1 cut(s) 127
EcoRV GATATC 1 cut(s) 885
EcoT14I CCWWGG 1 cut(s) 450
EcoT38I GRGCYC 1 cut(s) 41
ErhI CCWWGG 1 cut(s) 450
FaeI CATG 9 cut(s) 124, 454, 494, 569, 614, 635, 718, 741, 978
FaqI GGGAC 1 cut(s) 172
FatI CATG 9 cut(s) 120, 450, 490, 565, 610, 631, 714, 737, 974
FauNDI CATATG 1 cut(s) 583
Fnu4HI GCNGC 1 cut(s) 746
FokI GGATG 3 cut(s) 183, 265, 548
FriOI GRGCYC 1 cut(s) 41
Fsp4HI GCNGC 1 cut(s) 746
FspBI CTAG 2 cut(s) 483, 999
GluI GCNGC 1 cut(s) 746
GsaI CCCAGC 1 cut(s) 251
HaeIII GGCC 2 cut(s) 879, 1003
HapII CCGG 1 cut(s) 698
HgaI GACGC 1 cut(s) 205
Hin1II CATG 9 cut(s) 124, 454, 494, 569, 614, 635, 718, 741, 978
HinfI GANTC 3 cut(s) 325, 678, 775
HpaII CCGG 1 cut(s) 698
HphI GGTGA 5 cut(s) 325, 376, 652, 673, 817
Hpy166II GTNNAC 2 cut(s) 149, 643
Hpy188I TCNGA 5 cut(s) 439, 670, 780, 889, 901
Hpy188III TCNNGA 3 cut(s) 9, 56, 329
Hpy8I GTNNAC 2 cut(s) 149, 643
HpyCH4III ACNGT 1 cut(s) 764
HpyCH4IV ACGT 2 cut(s) 606, 819
HpyCH4V TGCA 8 cut(s) 23, 108, 124, 545, 557, 598, 610, 974
HpyF10VI GCNNNNNNNGC 3 cut(s) 20, 130, 742
HpyF3I CTNAG 7 cut(s) 200, 212, 258, 360, 414, 655, 773
HpySE526I ACGT 2 cut(s) 606, 819
Hsp92II CATG 9 cut(s) 124, 454, 494, 569, 614, 635, 718, 741, 978
Kzo9I GATC 2 cut(s) 52, 420
LmnI GCTCC 2 cut(s) 615, 694
Lsp1109I GCAGC 1 cut(s) 757
LweI GCATC 2 cut(s) 117, 585
MaeI CTAG 2 cut(s) 483, 999
MaeII ACGT 2 cut(s) 606, 819
MaeIII GTNAC 3 cut(s) 329, 494, 785
MalI GATC 2 cut(s) 54, 422
MboI GATC 2 cut(s) 52, 420
MboII GAAGA 8 cut(s) 62, 113, 310, 352, 385, 604, 793, 878
MfeI CAATTG 2 cut(s) 552, 686
MhlI GDGCHC 2 cut(s) 41, 354
MluCI AATT 3 cut(s) 552, 686, 705
MlyI GAGTC 2 cut(s) 334, 784
MmeI TCCRAC 1 cut(s) 486
MnlI CCTC 6 cut(s) 195, 209, 294, 411, 933, 988
MseI TTAA 1 cut(s) 17
MspA1I CMGCKG 1 cut(s) 144
MspI CCGG 1 cut(s) 698
MunI CAATTG 2 cut(s) 552, 686
Mva1269I GAATGC 1 cut(s) 557
MwoI GCNNNNNNNGC 3 cut(s) 20, 130, 742
NcoI CCATGG 1 cut(s) 450
NdeI CATATG 1 cut(s) 583
NdeII GATC 2 cut(s) 52, 420
NlaIII CATG 9 cut(s) 124, 454, 494, 569, 614, 635, 718, 741, 978
NlaIV GGNNCC 2 cut(s) 515, 696
NmuCI GTSAC 3 cut(s) 329, 494, 785
NspI RCATGY 2 cut(s) 718, 978
PceI AGGCCT 2 cut(s) 879, 1003
PciI ACATGT 1 cut(s) 714
PctI GAATGC 1 cut(s) 557
PfeI GAWTC 1 cut(s) 678
PflMI CCANNNNNTGG 2 cut(s) 637, 717
PkrI GCNGC 1 cut(s) 747
PleI GAGTC 2 cut(s) 333, 783
PpsI GAGTC 2 cut(s) 333, 783
PpuMI RGGWCCY 1 cut(s) 127
PscI ACATGT 1 cut(s) 714
Psp5II RGGWCCY 1 cut(s) 127
PspFI CCCAGC 1 cut(s) 247
PspN4I GGNNCC 2 cut(s) 515, 696
PspPI GGNCC 2 cut(s) 127, 830
PspPPI RGGWCCY 1 cut(s) 127
PstNI CAGNNNCTG 1 cut(s) 130
RsaI GTAC 1 cut(s) 979
RsaNI GTAC 1 cut(s) 978
SaqAI TTAA 1 cut(s) 17
SatI GCNGC 1 cut(s) 746
Sau3AI GATC 2 cut(s) 52, 420
Sau96I GGNCC 2 cut(s) 127, 830
SchI GAGTC 2 cut(s) 334, 784
SduI GDGCHC 2 cut(s) 41, 354
SfaNI GCATC 2 cut(s) 117, 585
SinI GGWCC 2 cut(s) 127, 830
Sse9I AATT 3 cut(s) 552, 686, 705
SseBI AGGCCT 2 cut(s) 879, 1003
SsiI CCGC 2 cut(s) 142, 692
SspMI CTAG 2 cut(s) 483, 999
StuI AGGCCT 2 cut(s) 879, 1003
StyI CCWWGG 1 cut(s) 450
TaaI ACNGT 1 cut(s) 764
TaiI ACGT 2 cut(s) 609, 822
TaqI TCGA 2 cut(s) 648, 702
TasI AATT 3 cut(s) 552, 686, 705
TatI WGTACW 1 cut(s) 977
TfiI GAWTC 1 cut(s) 678
Tru1I TTAA 1 cut(s) 17
Tru9I TTAA 1 cut(s) 17
TseFI GTSAC 3 cut(s) 329, 494, 785
TseI GCWGC 1 cut(s) 745
Tsp45I GTSAC 3 cut(s) 329, 494, 785
TspDTI ATGAA 7 cut(s) 63, 109, 527, 550, 570, 617, 743
Van91I CCANNNNNTGG 2 cut(s) 637, 717
VpaK11BI GGWCC 2 cut(s) 127, 830
XapI RAATTY 1 cut(s) 705
XceI RCATGY 2 cut(s) 718, 978
XspI CTAG 2 cut(s) 483, 999
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.