MD06G1104800.v1.1
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
OG0015660
Physical Location & Seq
Forward (+)
24359691 .. 24361506
1816 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1104800.v1.1.491

Sequence Viewer

Length: 1032 bp
ATGTTAACCCTAACAGAAAAACCCAGAAGAAGCCCCAAAAACGAACAACTAAACAGCTGCGCCAGCTCCTTCGCCGACTATGAAGACTGCATCGTTGGCTTCATGGACGACCTTCAACTTGTCCACTGCGGCCACGACAAGAAGTGTTTGGGGTGCGGGGAAGAGCTAGCCCACCTGACACTAAGGGGTGTGCTGAGGGGTTCAGTGGGTGTGATCGGAGAGAGCAGGCTGGCGATGACTGAGAAGGTGGTGTTGTTGGGAGGTAGGGTTTGTGCTGTGAAAAGGTTTAGGCAAGTGAGCTCCGGAAGTCGTGAGTTTGGGAAGAAAATCGAGCACTTGGCTAGGGTGAGTCAGAAGTGCGAGTATCTTGTGCCTGTCGCTGCATATTTGTATGCTAAGAGGATCAAGTTTGTTCTCTGCGATTATAAACCCATGGGAAGCCTCGCCGACTTGCTGGCCGGTGCTAGGCAGCATGGCCACACAGCATTGGACTGGAACCAAAGGCTCACCATAATTGTTCAAATTGCACGAGGAATTGGATTCATCCACGAACAATACCCTCCATATGAGAAGAAGATGCAGATGAACGTGCATGGGAACATTAAGGTTTGCAATGTCATGGTGAATACCGACTTCTCAGCCTGCTTGTCTGGTTACGGATTCACCCAATTGGCAGAGCCAGTTGAAGTTCTCAACACAAGGCAGCTGATGAAGTCGCCTAGCTGGCAGCAAGAAAATACCACCTACTCTGATGAACTGAGTCAGAAGAGTGACATTTATAATTTTGGGGTTATACTGCTGGACATATTGGCAGGACCAAAGGGTTTGGAAATGACAGAGGGCGTAAAGGAAAAGAAGGCAAGCATGAAATTAGAAGGTGGTTTGGAGTTCTTTGAGTTTTATGTGAAGGAAGGCAAAGAGAAGAGGCAAGTGTCAAAGGTTTTGGAAATTGCTTTGGCATGTATAAGTACCAAACCAGACGCTAGGCCTTCAATAGAAGAGATTTGTTTTAATATCGTGGAGATATTGTAA

Protein Analysis

344

Amino Acids

38.38

Weight (kDa)

8.17

Isoelectric Point (pI)

42.49

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 80 - 336 2.2e-12 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 89 - 336 3.8e-16 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015660)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26430
malus_domestica MD06G1104800.v1.1 MD14G1123700.v1.1
prunus_persica Prupe.5G117400_v2.0.a1
pyrus_communis pycom06g09930
rosa_chinensis RchiOBHm_Chr7g0195111
rosa_laevigata RLG00000004145
rosa_multiflora Rmu_co8510033.1_g000001 Rmu_sc0002381.1_g000031
rosa_roxburghii Rroxscaffold_3G00260770
rosa_rugosa Rorug07G0020900
rosa_samantha Rh7AG148200 Rh7BG149000 Rh7CG152400 Rh7DG149300
rosa_wichuraiana Rw7G012650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 426, 780
AccIII TCCGGA 1 cut(s) 302
AciI CCGC 2 cut(s) 129, 156
AclWI GGATC 1 cut(s) 410
AcoI YGGCCR 3 cut(s) 130, 456, 475
AfaI GTAC 1 cut(s) 970
AfiI CCNNNNNNNGG 1 cut(s) 465
AgsI TTSAA 4 cut(s) 116, 521, 686, 993
AluBI AGCT 6 cut(s) 57, 66, 166, 300, 706, 723
AluI AGCT 6 cut(s) 57, 66, 166, 300, 706, 723
Alw21I GWGCWC 2 cut(s) 302, 336
AlwI GGATC 1 cut(s) 410
Aor13HI TCCGGA 1 cut(s) 302
AoxI GGCC 4 cut(s) 130, 456, 475, 986
ApeKI GCWGC 5 cut(s) 57, 380, 469, 703, 727
AspLEI GCGC 1 cut(s) 62
AspS9I GGNCC 1 cut(s) 815
AsuHPI GGTGA 4 cut(s) 358, 499, 634, 655
AsuNHI GCTAGC 1 cut(s) 166
AvaII GGWCC 1 cut(s) 815
BalI TGGCCA 1 cut(s) 477
BanII GRGCYC 1 cut(s) 302
BauI CACGAG 1 cut(s) 528
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 2 cut(s) 302, 336
BbvCI CCTCAGC 1 cut(s) 194
BbvI GCAGC 5 cut(s) 44, 367, 481, 715, 739
BfaI CTAG 5 cut(s) 167, 342, 465, 720, 984
BglI GCCNNNNNGGC 1 cut(s) 724
BisI GCNGC 6 cut(s) 58, 130, 381, 470, 704, 728
BlsI GCNGC 6 cut(s) 59, 131, 382, 471, 705, 729
Bme18I GGWCC 1 cut(s) 815
BmgT120I GGNCC 1 cut(s) 815
BmiI GGNNCC 1 cut(s) 497
BmsI GCATC 2 cut(s) 99, 567
BmtI GCTAGC 1 cut(s) 170
BpiI GAAGAC 1 cut(s) 90
Bpu10I CCTNAGC 1 cut(s) 194
BsaJI CCNNGG 1 cut(s) 432
BsaWI WCCGGW 1 cut(s) 302
BsaXI ACNNNNNCTCC 3 cut(s) 252, 282, 1013
Bsc4I CCNNNNNNNGG 1 cut(s) 465
Bse118I RCCGGY 1 cut(s) 458
Bse1I ACTGG 2 cut(s) 497, 680
Bse3DI GCAATG 1 cut(s) 619
BseAI TCCGGA 1 cut(s) 302
BseDI CCNNGG 1 cut(s) 432
BseGI GGATG 1 cut(s) 543
BseLI CCNNNNNNNGG 1 cut(s) 465
BseMI GCAATG 1 cut(s) 619
BseMII CTCAG 4 cut(s) 185, 231, 651, 749
BseNI ACTGG 2 cut(s) 497, 680
BseXI GCAGC 5 cut(s) 44, 367, 481, 715, 739
BshFI GGCC 4 cut(s) 132, 458, 477, 988
BsiHKAI GWGCWC 2 cut(s) 302, 336
BsiSI CCGG 2 cut(s) 303, 459
BslI CCNNNNNNNGG 1 cut(s) 465
BsnI GGCC 4 cut(s) 132, 458, 477, 988
Bsp1286I GDGCHC 2 cut(s) 302, 336
Bsp13I TCCGGA 1 cut(s) 302
Bsp143I GATC 2 cut(s) 213, 402
Bsp19I CCATGG 1 cut(s) 432
BspACI CCGC 2 cut(s) 129, 156
BspANI GGCC 4 cut(s) 132, 458, 477, 988
BspCNI CTCAG 4 cut(s) 186, 232, 650, 750
BspEI TCCGGA 1 cut(s) 302
BspLI GGNNCC 1 cut(s) 497
BspOI GCTAGC 1 cut(s) 170
BspPI GGATC 1 cut(s) 410
BspQI GCTCTTC 1 cut(s) 156
BsrDI GCAATG 1 cut(s) 619
BsrFI RCCGGY 1 cut(s) 458
BsrI ACTGG 2 cut(s) 497, 680
BssAI RCCGGY 1 cut(s) 458
BssECI CCNNGG 1 cut(s) 432
BssMI GATC 2 cut(s) 213, 402
BssSI CACGAG 1 cut(s) 528
BssT1I CCWWGG 1 cut(s) 432
Bst2BI CACGAG 1 cut(s) 528
Bst6I CTCTTC 4 cut(s) 156, 761, 917, 993
BstC8I GCNNGC 8 cut(s) 64, 168, 227, 231, 456, 643, 725, 862
BstDEI CTNAG 6 cut(s) 182, 194, 240, 396, 637, 758
BstDSI CCRYGG 1 cut(s) 432
BstF5I GGATG 1 cut(s) 543
BstHHI GCGC 1 cut(s) 62
BstKTI GATC 2 cut(s) 216, 405
BstMBI GATC 2 cut(s) 213, 402
BstMWI GCNNNNNNNGC 3 cut(s) 63, 96, 724
BstNSI RCATGY 1 cut(s) 963
BstV1I GCAGC 5 cut(s) 44, 367, 481, 715, 739
BstV2I GAAGAC 1 cut(s) 90
BsuRI GGCC 4 cut(s) 132, 458, 477, 988
BtgI CCRYGG 1 cut(s) 432
BtgZI GCGATG 1 cut(s) 248
BtsCI GGATG 1 cut(s) 543
BtsI GCAGTG 1 cut(s) 124
BtsIMutI CAGTG 2 cut(s) 124, 210
Cac8I GCNNGC 8 cut(s) 64, 168, 227, 231, 456, 643, 725, 862
CfoI GCGC 1 cut(s) 62
Cfr10I RCCGGY 1 cut(s) 458
Cfr13I GGNCC 1 cut(s) 815
CseI GACGC 1 cut(s) 989
Csp6I GTAC 1 cut(s) 969
CviAII CATG 7 cut(s) 103, 433, 473, 593, 619, 865, 960
CviQI GTAC 1 cut(s) 969
DdeI CTNAG 6 cut(s) 182, 194, 240, 396, 637, 758
DpnI GATC 2 cut(s) 215, 404
DpnII GATC 2 cut(s) 213, 402
EaeI YGGCCR 3 cut(s) 130, 456, 475
Eam1104I CTCTTC 4 cut(s) 156, 761, 917, 993
EarI CTCTTC 4 cut(s) 156, 761, 917, 993
Ecl136II GAGCTC 1 cut(s) 300
Eco130I CCWWGG 1 cut(s) 432
Eco147I AGGCCT 1 cut(s) 988
Eco24I GRGCYC 1 cut(s) 302
Eco47I GGWCC 1 cut(s) 815
Eco53kI GAGCTC 1 cut(s) 300
EcoICRI GAGCTC 1 cut(s) 300
EcoT14I CCWWGG 1 cut(s) 432
EcoT38I GRGCYC 1 cut(s) 302
ErhI CCWWGG 1 cut(s) 432
FaeI CATG 7 cut(s) 106, 436, 476, 596, 622, 868, 963
FatI CATG 7 cut(s) 102, 432, 472, 592, 618, 864, 959
FauI CCCGC 1 cut(s) 149
FauNDI CATATG 1 cut(s) 565
Fnu4HI GCNGC 6 cut(s) 58, 130, 381, 470, 704, 728
FokI GGATG 1 cut(s) 530
FriOI GRGCYC 1 cut(s) 302
Fsp4HI GCNGC 6 cut(s) 58, 130, 381, 470, 704, 728
FspBI CTAG 5 cut(s) 167, 342, 465, 720, 984
GlaI GCGC 1 cut(s) 61
GluI GCNGC 6 cut(s) 58, 130, 381, 470, 704, 728
HaeIII GGCC 4 cut(s) 132, 458, 477, 988
HapII CCGG 2 cut(s) 303, 459
HgaI GACGC 1 cut(s) 989
HhaI GCGC 1 cut(s) 62
Hin1II CATG 7 cut(s) 106, 436, 476, 596, 622, 868, 963
Hin6I GCGC 1 cut(s) 60
HinP1I GCGC 1 cut(s) 60
HincII GTYRAC 1 cut(s) 6
HindII GTYRAC 1 cut(s) 6
HinfI GANTC 4 cut(s) 349, 540, 660, 760
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 2 cut(s) 303, 459
HphI GGTGA 4 cut(s) 358, 499, 634, 655
Hpy166II GTNNAC 2 cut(s) 6, 124
Hpy188I TCNGA 4 cut(s) 218, 354, 751, 765
Hpy188III TCNNGA 2 cut(s) 303, 311
Hpy8I GTNNAC 2 cut(s) 6, 124
HpyAV CCTTC 8 cut(s) 79, 122, 238, 850, 869, 901, 905, 999
HpyCH4IV ACGT 1 cut(s) 588
HpyCH4V TGCA 6 cut(s) 90, 383, 527, 580, 592, 612
HpyF10VI GCNNNNNNNGC 3 cut(s) 63, 96, 724
HpyF3I CTNAG 6 cut(s) 182, 194, 240, 396, 637, 758
HpySE526I ACGT 1 cut(s) 588
Hsp92II CATG 7 cut(s) 106, 436, 476, 596, 622, 868, 963
HspAI GCGC 1 cut(s) 60
Kpn2I TCCGGA 1 cut(s) 302
KspAI GTTAAC 1 cut(s) 6
Kzo9I GATC 2 cut(s) 213, 402
LguI GCTCTTC 1 cut(s) 156
LmnI GCTCC 2 cut(s) 71, 305
Lsp1109I GCAGC 5 cut(s) 44, 367, 481, 715, 739
LweI GCATC 2 cut(s) 99, 567
MaeI CTAG 5 cut(s) 167, 342, 465, 720, 984
MaeII ACGT 1 cut(s) 588
MaeIII GTNAC 2 cut(s) 653, 770
MalI GATC 2 cut(s) 215, 404
MboI GATC 2 cut(s) 213, 402
MboII GAAGA 9 cut(s) 39, 95, 173, 334, 583, 586, 778, 934, 1010
MfeI CAATTG 1 cut(s) 668
MhlI GDGCHC 2 cut(s) 302, 336
MlsI TGGCCA 1 cut(s) 477
MluCI AATT 7 cut(s) 513, 522, 534, 668, 781, 869, 948
MluNI TGGCCA 1 cut(s) 477
MlyI GAGTC 2 cut(s) 358, 769
MnlI CCTC 8 cut(s) 189, 254, 393, 452, 524, 570, 832, 918
Mox20I TGGCCA 1 cut(s) 477
MroI TCCGGA 1 cut(s) 302
MscI TGGCCA 1 cut(s) 477
MseI TTAA 3 cut(s) 5, 603, 1011
Msp20I TGGCCA 1 cut(s) 477
MspA1I CMGCKG 2 cut(s) 57, 706
MspI CCGG 2 cut(s) 303, 459
MunI CAATTG 1 cut(s) 668
MwoI GCNNNNNNNGC 3 cut(s) 63, 96, 724
NcoI CCATGG 1 cut(s) 432
NdeI CATATG 1 cut(s) 565
NdeII GATC 2 cut(s) 213, 402
NheI GCTAGC 1 cut(s) 166
NlaIII CATG 7 cut(s) 106, 436, 476, 596, 622, 868, 963
NlaIV GGNNCC 1 cut(s) 497
NmuCI GTSAC 1 cut(s) 770
NspI RCATGY 1 cut(s) 963
PceI AGGCCT 1 cut(s) 988
PciSI GCTCTTC 1 cut(s) 156
PfeI GAWTC 2 cut(s) 540, 660
PkrI GCNGC 6 cut(s) 59, 131, 382, 471, 705, 729
PleI GAGTC 2 cut(s) 357, 768
PpsI GAGTC 2 cut(s) 357, 768
PsiI TTATAA 2 cut(s) 426, 780
Psp124BI GAGCTC 1 cut(s) 302
PspN4I GGNNCC 1 cut(s) 497
PspPI GGNCC 1 cut(s) 815
PvuII CAGCTG 2 cut(s) 57, 706
RsaI GTAC 1 cut(s) 970
RsaNI GTAC 1 cut(s) 969
SacI GAGCTC 1 cut(s) 302
SapI GCTCTTC 1 cut(s) 156
SaqAI TTAA 3 cut(s) 5, 603, 1011
SatI GCNGC 6 cut(s) 58, 130, 381, 470, 704, 728
Sau3AI GATC 2 cut(s) 213, 402
Sau96I GGNCC 1 cut(s) 815
SchI GAGTC 2 cut(s) 358, 769
SduI GDGCHC 2 cut(s) 302, 336
SfaNI GCATC 2 cut(s) 99, 567
SinI GGWCC 1 cut(s) 815
Sse9I AATT 7 cut(s) 513, 522, 534, 668, 781, 869, 948
SseBI AGGCCT 1 cut(s) 988
SsiI CCGC 2 cut(s) 129, 156
SspMI CTAG 5 cut(s) 167, 342, 465, 720, 984
SstI GAGCTC 1 cut(s) 302
StuI AGGCCT 1 cut(s) 988
StyI CCWWGG 1 cut(s) 432
TaiI ACGT 1 cut(s) 591
TaqI TCGA 1 cut(s) 330
TasI AATT 7 cut(s) 513, 522, 534, 668, 781, 869, 948
TauI GCSGC 1 cut(s) 132
TfiI GAWTC 2 cut(s) 540, 660
Tru1I TTAA 3 cut(s) 5, 603, 1011
Tru9I TTAA 3 cut(s) 5, 603, 1011
TscAI CASTG 2 cut(s) 131, 210
TseFI GTSAC 1 cut(s) 770
TseI GCWGC 5 cut(s) 57, 380, 469, 703, 727
Tsp45I GTSAC 1 cut(s) 770
TspDTI ATGAA 7 cut(s) 91, 96, 532, 599, 725, 768, 881
TspGWI ACGGA 1 cut(s) 672
TspRI CASTG 2 cut(s) 131, 210
VpaK11BI GGWCC 1 cut(s) 815
XceI RCATGY 1 cut(s) 963
XspI CTAG 5 cut(s) 167, 342, 465, 720, 984
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.