Rmu_co8510033.1_g000001
NAC Family

inactive receptor kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8510033.1
OG0015660
Physical Location & Seq
Reverse (-)
1507 .. 1962
456 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8510033.1_g000001.1.cds

Sequence Viewer

Length: 456 bp
atgatgatgcacatccacggcagcatcaaggcctcaaacgtattagtgaacatcgacttctcagcctgcttatccgattacgggttcacccaattggcggagcaagttgagattccggaaacatggcaggtgatgaagtcgcccttctggctggtggaagagaccaattactctgacgagttgaaccagaaggctgacatttacaactttggggtaatactgctggacgttttagcaggttccaggggcttgagtctgatgaaaaagggggcaaaggagaagaaggaagccatgaaatttgatgggttggacttggttgagtttggtacgaaggatgcgaaagaaaggaggcaagtatcaaaggtcttcgacattgccgtggcatgtacgaatgccaaacgggagactaggcctacaatagatgagatttataatgatatcgtggggataatgtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase Pkinase_Tyr

Protein Analysis

151

Amino Acids

17.04

Weight (kDa)

5.08

Isoelectric Point (pI)

40.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0015660)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g26430
malus_domestica MD06G1104800.v1.1 MD14G1123700.v1.1
prunus_persica Prupe.5G117400_v2.0.a1
pyrus_communis pycom06g09930
rosa_chinensis RchiOBHm_Chr7g0195111
rosa_laevigata RLG00000004145
rosa_multiflora Rmu_co8510033.1_g000001 Rmu_sc0002381.1_g000031
rosa_roxburghii Rroxscaffold_3G00260770
rosa_rugosa Rorug07G0020900
rosa_samantha Rh7AG148200 Rh7BG149000 Rh7CG152400 Rh7DG149300
rosa_wichuraiana Rw7G012650

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 432
AarI CACCTGC 1 cut(s) 118
Acc36I ACCTGC 2 cut(s) 118, 227
AccIII TCCGGA 1 cut(s) 115
AciI CCGC 1 cut(s) 98
AcsI RAATTY 1 cut(s) 296
AfaI GTAC 2 cut(s) 328, 388
AfiI CCNNNNNNNGG 2 cut(s) 81, 97
AgsI TTSAA 1 cut(s) 184
AjnI CCWGG 1 cut(s) 242
Alw26I GTCTC 2 cut(s) 155, 398
Aor13HI TCCGGA 1 cut(s) 115
AoxI GGCC 2 cut(s) 30, 410
ApeKI GCWGC 1 cut(s) 21
ApoI RAATTY 1 cut(s) 296
AsuHPI GGTGA 2 cut(s) 79, 142
BbsI GAAGAC 1 cut(s) 358
BbvI GCAGC 1 cut(s) 33
BccI CCATC 1 cut(s) 296
BceAI ACGGC 2 cut(s) 34, 362
BciT130I CCWGG 1 cut(s) 244
BcoDI GTCTC 2 cut(s) 155, 398
BfaI CTAG 1 cut(s) 408
BfuAI ACCTGC 2 cut(s) 118, 227
BglI GCCNNNNNGGC 1 cut(s) 148
BisI GCNGC 1 cut(s) 22
BlsI GCNGC 1 cut(s) 23
Bme1390I CCNGG 1 cut(s) 244
BmiI GGNNCC 1 cut(s) 241
BmrFI CCNGG 1 cut(s) 244
BmsI GCATC 2 cut(s) 33, 325
BpiI GAAGAC 1 cut(s) 358
BpuEI CTTGAG 1 cut(s) 271
BsaBI GATNNNNATC 1 cut(s) 11
BsaI GGTCTC 1 cut(s) 155
BsaJI CCNNGG 3 cut(s) 16, 243, 378
BsaWI WCCGGW 1 cut(s) 115
Bsc4I CCNNNNNNNGG 2 cut(s) 81, 97
Bse3DI GCAATG 1 cut(s) 372
Bse8I GATNNNNATC 1 cut(s) 11
BseAI TCCGGA 1 cut(s) 115
BseBI CCWGG 1 cut(s) 244
BseDI CCNNGG 3 cut(s) 16, 243, 378
BseGI GGATG 2 cut(s) 12, 340
BseJI GATNNNNATC 1 cut(s) 11
BseLI CCNNNNNNNGG 2 cut(s) 81, 97
BseMI GCAATG 1 cut(s) 372
BseMII CTCAG 1 cut(s) 75
BseXI GCAGC 1 cut(s) 33
BshFI GGCC 2 cut(s) 32, 412
BsiSI CCGG 1 cut(s) 116
BslI CCNNNNNNNGG 2 cut(s) 81, 97
BsmAI GTCTC 2 cut(s) 155, 398
BsmI GAATGC 1 cut(s) 397
BsnI GGCC 2 cut(s) 32, 412
Bso31I GGTCTC 1 cut(s) 155
Bsp13I TCCGGA 1 cut(s) 115
BspACI CCGC 1 cut(s) 98
BspANI GGCC 2 cut(s) 32, 412
BspCNI CTCAG 1 cut(s) 74
BspEI TCCGGA 1 cut(s) 115
BspLI GGNNCC 1 cut(s) 241
BspMI ACCTGC 2 cut(s) 118, 227
BspTNI GGTCTC 1 cut(s) 155
BsrDI GCAATG 1 cut(s) 372
BssECI CCNNGG 3 cut(s) 16, 243, 378
Bst2UI CCWGG 1 cut(s) 244
Bst6I CTCTTC 1 cut(s) 153
BstC8I GCNNGC 1 cut(s) 67
BstDEI CTNAG 1 cut(s) 61
BstDSI CCRYGG 2 cut(s) 16, 378
BstF5I GGATG 2 cut(s) 12, 340
BstMAI GTCTC 2 cut(s) 155, 398
BstMWI GCNNNNNNNGC 1 cut(s) 148
BstNI CCWGG 1 cut(s) 244
BstNSI RCATGY 1 cut(s) 387
BstSCI CCNGG 1 cut(s) 242
BstV1I GCAGC 1 cut(s) 33
BstV2I GAAGAC 1 cut(s) 358
BsuRI GGCC 2 cut(s) 32, 412
BtgI CCRYGG 2 cut(s) 16, 378
BtsCI GGATG 2 cut(s) 12, 340
BveI ACCTGC 2 cut(s) 118, 227
Cac8I GCNNGC 1 cut(s) 67
Csp6I GTAC 2 cut(s) 327, 387
CviAII CATG 3 cut(s) 123, 292, 384
CviJI RGCY 7 cut(s) 32, 65, 151, 194, 249, 290, 412
CviKI_1 RGCY 7 cut(s) 32, 65, 151, 194, 249, 290, 412
CviQI GTAC 2 cut(s) 327, 387
DdeI CTNAG 1 cut(s) 61
Eam1104I CTCTTC 1 cut(s) 153
EarI CTCTTC 1 cut(s) 153
EciI GGCGGA 1 cut(s) 113
Eco147I AGGCCT 2 cut(s) 32, 412
Eco31I GGTCTC 1 cut(s) 155
Eco32I GATATC 1 cut(s) 439
EcoRII CCWGG 1 cut(s) 242
EcoRV GATATC 1 cut(s) 439
FaeI CATG 3 cut(s) 126, 295, 387
FaiI YATR 4 cut(s) 124, 293, 385, 432
FalI AAGNNNNNCTT 2 cut(s) 128, 160
FatI CATG 3 cut(s) 122, 291, 383
Fnu4HI GCNGC 1 cut(s) 22
FokI GGATG 1 cut(s) 347
Fsp4HI GCNGC 1 cut(s) 22
FspBI CTAG 1 cut(s) 408
GluI GCNGC 1 cut(s) 22
HaeIII GGCC 2 cut(s) 32, 412
HapII CCGG 1 cut(s) 116
Hin1II CATG 3 cut(s) 126, 295, 387
HinfI GANTC 2 cut(s) 112, 253
HpaII CCGG 1 cut(s) 116
HphI GGTGA 2 cut(s) 79, 142
Hpy166II GTNNAC 2 cut(s) 49, 87
Hpy188I TCNGA 3 cut(s) 76, 175, 258
Hpy188III TCNNGA 1 cut(s) 116
Hpy8I GTNNAC 2 cut(s) 49, 87
HpyAV CCTTC 4 cut(s) 154, 184, 277, 325
HpyCH4IV ACGT 2 cut(s) 39, 228
HpyCH4V TGCA 1 cut(s) 10
HpyF10VI GCNNNNNNNGC 1 cut(s) 148
HpyF3I CTNAG 1 cut(s) 61
HpySE526I ACGT 2 cut(s) 39, 228
Hsp92II CATG 3 cut(s) 126, 295, 387
Kpn2I TCCGGA 1 cut(s) 115
LmnI GCTCC 1 cut(s) 100
Lsp1109I GCAGC 1 cut(s) 33
LweI GCATC 2 cut(s) 33, 325
MaeI CTAG 1 cut(s) 408
MaeII ACGT 2 cut(s) 39, 228
MboII GAAGA 3 cut(s) 170, 292, 358
MfeI CAATTG 1 cut(s) 92
MluCI AATT 3 cut(s) 92, 166, 296
MlyI GAGTC 1 cut(s) 262
MmeI TCCRAC 1 cut(s) 288
MnlI CCTC 2 cut(s) 43, 342
MroI TCCGGA 1 cut(s) 115
MslI CAYNNNNRTG 1 cut(s) 377
MspI CCGG 1 cut(s) 116
MspR9I CCNGG 1 cut(s) 244
MunI CAATTG 1 cut(s) 92
Mva1269I GAATGC 1 cut(s) 397
MvaI CCWGG 1 cut(s) 244
MwoI GCNNNNNNNGC 1 cut(s) 148
NlaIII CATG 3 cut(s) 126, 295, 387
NlaIV GGNNCC 1 cut(s) 241
NspI RCATGY 1 cut(s) 387
PaqCI CACCTGC 1 cut(s) 118
PceI AGGCCT 2 cut(s) 32, 412
PcsI WCGNNNNNNNCGW 2 cut(s) 335, 375
PctI GAATGC 1 cut(s) 397
PfeI GAWTC 1 cut(s) 112
PkrI GCNGC 1 cut(s) 23
PleI GAGTC 1 cut(s) 261
PpsI GAGTC 1 cut(s) 261
PsiI TTATAA 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 242
PspGI CCWGG 1 cut(s) 242
PspN4I GGNNCC 1 cut(s) 241
RsaI GTAC 2 cut(s) 328, 388
RsaNI GTAC 2 cut(s) 327, 387
RseI CAYNNNNRTG 1 cut(s) 377
SatI GCNGC 1 cut(s) 22
SchI GAGTC 1 cut(s) 262
ScrFI CCNGG 1 cut(s) 244
SetI ASST 5 cut(s) 42, 132, 231, 241, 366
SfaNI GCATC 2 cut(s) 33, 325
SmiMI CAYNNNNRTG 1 cut(s) 377
SmlI CTYRAG 1 cut(s) 250
SmoI CTYRAG 1 cut(s) 250
Sse9I AATT 3 cut(s) 92, 166, 296
SseBI AGGCCT 2 cut(s) 32, 412
SsiI CCGC 1 cut(s) 98
SspMI CTAG 1 cut(s) 408
StuI AGGCCT 2 cut(s) 32, 412
StyD4I CCNGG 1 cut(s) 242
TaiI ACGT 2 cut(s) 42, 231
TaqI TCGA 2 cut(s) 54, 369
TasI AATT 3 cut(s) 92, 166, 296
TfiI GAWTC 1 cut(s) 112
TseI GCWGC 1 cut(s) 21
TspDTI ATGAA 3 cut(s) 149, 275, 308
XapI RAATTY 1 cut(s) 296
XceI RCATGY 1 cut(s) 387
XspI CTAG 1 cut(s) 408
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.