ZINC FINGER protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80730 |
| fragaria_vesca | FvH4_6g28840 |
| malus_domestica | MD09G1224100.v1.1 MD17G1221300.v1.1 |
| prunus_persica | Prupe.3G096400_v2.0.a1 |
| pyrus_communis | pycom17g22570 |
| rosa_chinensis | RchiOBHm_Chr2g0133371 |
| rosa_laevigata | RLG00000019327 |
| rosa_multiflora | Rmu_sc0003874.1_g000010 Rmu_sc0038578.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00111220 |
| rosa_rugosa | Rorug02G0311200 |
| rosa_samantha | Rh2AG363800 Rh2BG369700 Rh2CG347000 Rh2DG386500 |
| rosa_wichuraiana | Rw2G029610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 652 |
| AccB1I | GGYRCC | 2 cut(s) | 291, 652 |
| AciI | CCGC | 1 cut(s) | 559 |
| AclWI | GGATC | 3 cut(s) | 194, 570, 583 |
| AcoI | YGGCCR | 1 cut(s) | 324 |
| AfaI | GTAC | 3 cut(s) | 193, 631, 654 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 129, 419, 503 |
| AgeI | ACCGGT | 1 cut(s) | 655 |
| AgsI | TTSAA | 4 cut(s) | 430, 452, 597, 706 |
| AhlI | ACTAGT | 2 cut(s) | 188, 218 |
| AjnI | CCWGG | 1 cut(s) | 479 |
| AluBI | AGCT | 4 cut(s) | 71, 173, 736, 754 |
| AluI | AGCT | 4 cut(s) | 71, 173, 736, 754 |
| Alw26I | GTCTC | 1 cut(s) | 179 |
| AlwI | GGATC | 3 cut(s) | 194, 570, 583 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 133 |
| AoxI | GGCC | 1 cut(s) | 324 |
| ApeKI | GCWGC | 1 cut(s) | 356 |
| AsiGI | ACCGGT | 1 cut(s) | 655 |
| Asp718I | GGTACC | 1 cut(s) | 652 |
| AsuHPI | GGTGA | 1 cut(s) | 576 |
| BaeGI | GKGCMC | 1 cut(s) | 294 |
| BalI | TGGCCA | 1 cut(s) | 326 |
| BamHI | GGATCC | 1 cut(s) | 575 |
| BanI | GGYRCC | 2 cut(s) | 291, 652 |
| BbsI | GAAGAC | 3 cut(s) | 82, 582, 713 |
| BbvI | GCAGC | 1 cut(s) | 368 |
| BciT130I | CCWGG | 1 cut(s) | 481 |
| BclI | TGATCA | 1 cut(s) | 538 |
| BcoDI | GTCTC | 1 cut(s) | 179 |
| BcuI | ACTAGT | 2 cut(s) | 188, 218 |
| BfaI | CTAG | 4 cut(s) | 189, 219, 231, 396 |
| BfmI | CTRYAG | 1 cut(s) | 268 |
| BisI | GCNGC | 2 cut(s) | 357, 560 |
| BlsI | GCNGC | 2 cut(s) | 358, 561 |
| BmcAI | AGTACT | 1 cut(s) | 631 |
| Bme1390I | CCNGG | 1 cut(s) | 481 |
| BmiI | GGNNCC | 4 cut(s) | 293, 485, 577, 654 |
| BmrFI | CCNGG | 1 cut(s) | 481 |
| BpiI | GAAGAC | 3 cut(s) | 82, 582, 713 |
| BpuEI | CTTGAG | 1 cut(s) | 734 |
| BsaWI | WCCGGW | 3 cut(s) | 649, 655, 681 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 129, 419, 503 |
| Bse118I | RCCGGY | 1 cut(s) | 655 |
| Bse1I | ACTGG | 2 cut(s) | 38, 327 |
| BseBI | CCWGG | 1 cut(s) | 481 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 129, 419, 503 |
| BseMII | CTCAG | 2 cut(s) | 375, 515 |
| BseNI | ACTGG | 2 cut(s) | 38, 327 |
| BseSI | GKGCMC | 1 cut(s) | 294 |
| BseXI | GCAGC | 1 cut(s) | 368 |
| BsgI | GTGCAG | 1 cut(s) | 375 |
| BshFI | GGCC | 1 cut(s) | 326 |
| BshNI | GGYRCC | 2 cut(s) | 291, 652 |
| BshTI | ACCGGT | 1 cut(s) | 655 |
| BsiSI | CCGG | 3 cut(s) | 650, 656, 682 |
| BslFI | GGGAC | 1 cut(s) | 730 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 129, 419, 503 |
| BsmAI | GTCTC | 1 cut(s) | 179 |
| BsmFI | GGGAC | 1 cut(s) | 730 |
| BsmI | GAATGC | 1 cut(s) | 457 |
| BsnI | GGCC | 1 cut(s) | 326 |
| Bsp1286I | GDGCHC | 1 cut(s) | 294 |
| Bsp143I | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| BspACI | CCGC | 1 cut(s) | 559 |
| BspANI | GGCC | 1 cut(s) | 326 |
| BspCNI | CTCAG | 2 cut(s) | 374, 516 |
| BspHI | TCATGA | 2 cut(s) | 223, 721 |
| BspLI | GGNNCC | 4 cut(s) | 293, 485, 577, 654 |
| BspPI | GGATC | 3 cut(s) | 194, 570, 583 |
| BspT107I | GGYRCC | 2 cut(s) | 291, 652 |
| BsrFI | RCCGGY | 1 cut(s) | 655 |
| BsrI | ACTGG | 2 cut(s) | 38, 327 |
| BssAI | RCCGGY | 1 cut(s) | 655 |
| BssMI | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| Bst2UI | CCWGG | 1 cut(s) | 481 |
| Bst4CI | ACNGT | 4 cut(s) | 254, 272, 588, 626 |
| BstDEI | CTNAG | 3 cut(s) | 98, 361, 524 |
| BstKTI | GATC | 6 cut(s) | 97, 127, 202, 541, 578, 721 |
| BstMAI | GTCTC | 1 cut(s) | 179 |
| BstMBI | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| BstNI | CCWGG | 1 cut(s) | 481 |
| BstSCI | CCNGG | 1 cut(s) | 479 |
| BstSFI | CTRYAG | 1 cut(s) | 268 |
| BstSLI | GKGCMC | 1 cut(s) | 294 |
| BstV1I | GCAGC | 1 cut(s) | 368 |
| BstV2I | GAAGAC | 3 cut(s) | 82, 582, 713 |
| BstX2I | RGATCY | 1 cut(s) | 575 |
| BstYI | RGATCY | 1 cut(s) | 575 |
| BsuRI | GGCC | 1 cut(s) | 326 |
| BtsIMutI | CAGTG | 1 cut(s) | 320 |
| CaiI | CAGNNNCTG | 1 cut(s) | 133 |
| CciI | TCATGA | 2 cut(s) | 223, 721 |
| Cfr10I | RCCGGY | 1 cut(s) | 655 |
| Csp6I | GTAC | 3 cut(s) | 192, 630, 653 |
| CspAI | ACCGGT | 1 cut(s) | 655 |
| CviAII | CATG | 6 cut(s) | 224, 400, 419, 571, 580, 722 |
| CviQI | GTAC | 3 cut(s) | 192, 630, 653 |
| DdeI | CTNAG | 3 cut(s) | 98, 361, 524 |
| DpnI | GATC | 6 cut(s) | 96, 126, 201, 540, 577, 720 |
| DpnII | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| EaeI | YGGCCR | 1 cut(s) | 324 |
| EcoRII | CCWGG | 1 cut(s) | 479 |
| FaeI | CATG | 6 cut(s) | 227, 403, 422, 574, 583, 725 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 725, 757 |
| FaqI | GGGAC | 1 cut(s) | 730 |
| FatI | CATG | 6 cut(s) | 223, 399, 418, 570, 579, 721 |
| FbaI | TGATCA | 1 cut(s) | 538 |
| Fnu4HI | GCNGC | 2 cut(s) | 357, 560 |
| Fsp4HI | GCNGC | 2 cut(s) | 357, 560 |
| FspBI | CTAG | 4 cut(s) | 189, 219, 231, 396 |
| GluI | GCNGC | 2 cut(s) | 357, 560 |
| HaeIII | GGCC | 1 cut(s) | 326 |
| HapII | CCGG | 3 cut(s) | 650, 656, 682 |
| Hin1II | CATG | 6 cut(s) | 227, 403, 422, 574, 583, 725 |
| HindIII | AAGCTT | 1 cut(s) | 734 |
| HinfI | GANTC | 4 cut(s) | 119, 136, 167, 390 |
| HpaII | CCGG | 3 cut(s) | 650, 656, 682 |
| HphI | GGTGA | 1 cut(s) | 576 |
| Hpy166II | GTNNAC | 1 cut(s) | 275 |
| Hpy188I | TCNGA | 5 cut(s) | 124, 129, 184, 364, 639 |
| Hpy188III | TCNNGA | 6 cut(s) | 62, 80, 140, 224, 523, 722 |
| Hpy8I | GTNNAC | 1 cut(s) | 275 |
| HpyAV | CCTTC | 2 cut(s) | 486, 609 |
| HpyCH4III | ACNGT | 4 cut(s) | 254, 272, 588, 626 |
| HpyCH4V | TGCA | 5 cut(s) | 246, 356, 418, 457, 551 |
| HpyF3I | CTNAG | 3 cut(s) | 98, 361, 524 |
| Hsp92II | CATG | 6 cut(s) | 227, 403, 422, 574, 583, 725 |
| KpnI | GGTACC | 1 cut(s) | 656 |
| Ksp22I | TGATCA | 1 cut(s) | 538 |
| Kzo9I | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| LmnI | GCTCC | 1 cut(s) | 76 |
| Lsp1109I | GCAGC | 1 cut(s) | 368 |
| MaeI | CTAG | 4 cut(s) | 189, 219, 231, 396 |
| MaeIII | GTNAC | 3 cut(s) | 214, 438, 582 |
| MalI | GATC | 6 cut(s) | 96, 126, 201, 540, 577, 720 |
| MboI | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| MboII | GAAGA | 5 cut(s) | 59, 82, 582, 585, 718 |
| MfeI | CAATTG | 1 cut(s) | 552 |
| MflI | RGATCY | 1 cut(s) | 575 |
| MhlI | GDGCHC | 1 cut(s) | 294 |
| MlsI | TGGCCA | 1 cut(s) | 326 |
| MluCI | AATT | 6 cut(s) | 247, 367, 465, 517, 552, 669 |
| MluNI | TGGCCA | 1 cut(s) | 326 |
| MmeI | TCCRAC | 1 cut(s) | 135 |
| MnlI | CCTC | 6 cut(s) | 113, 123, 281, 370, 668, 758 |
| Mox20I | TGGCCA | 1 cut(s) | 326 |
| MscI | TGGCCA | 1 cut(s) | 326 |
| MslI | CAYNNNNRTG | 1 cut(s) | 297 |
| Msp20I | TGGCCA | 1 cut(s) | 326 |
| MspI | CCGG | 3 cut(s) | 650, 656, 682 |
| MspR9I | CCNGG | 1 cut(s) | 481 |
| MunI | CAATTG | 1 cut(s) | 552 |
| Mva1269I | GAATGC | 1 cut(s) | 457 |
| MvaI | CCWGG | 1 cut(s) | 481 |
| NdeII | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| NlaIII | CATG | 6 cut(s) | 227, 403, 422, 574, 583, 725 |
| NlaIV | GGNNCC | 4 cut(s) | 293, 485, 577, 654 |
| NmuCI | GTSAC | 2 cut(s) | 438, 582 |
| PagI | TCATGA | 2 cut(s) | 223, 721 |
| PctI | GAATGC | 1 cut(s) | 457 |
| PfeI | GAWTC | 4 cut(s) | 119, 136, 167, 390 |
| PfoI | TCCNGGA | 1 cut(s) | 479 |
| PinAI | ACCGGT | 1 cut(s) | 655 |
| PkrI | GCNGC | 2 cut(s) | 358, 561 |
| Psp6I | CCWGG | 1 cut(s) | 479 |
| PspGI | CCWGG | 1 cut(s) | 479 |
| PspN4I | GGNNCC | 4 cut(s) | 293, 485, 577, 654 |
| PstNI | CAGNNNCTG | 1 cut(s) | 133 |
| PsuI | RGATCY | 1 cut(s) | 575 |
| RsaI | GTAC | 3 cut(s) | 193, 631, 654 |
| RsaNI | GTAC | 3 cut(s) | 192, 630, 653 |
| RseI | CAYNNNNRTG | 1 cut(s) | 297 |
| SatI | GCNGC | 2 cut(s) | 357, 560 |
| Sau3AI | GATC | 6 cut(s) | 94, 124, 199, 538, 575, 718 |
| ScaI | AGTACT | 1 cut(s) | 631 |
| ScrFI | CCNGG | 1 cut(s) | 481 |
| SduI | GDGCHC | 1 cut(s) | 294 |
| SetI | ASST | 6 cut(s) | 73, 175, 440, 620, 738, 756 |
| SfcI | CTRYAG | 1 cut(s) | 268 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 297 |
| SmlI | CTYRAG | 1 cut(s) | 749 |
| SmoI | CTYRAG | 1 cut(s) | 749 |
| SpeI | ACTAGT | 2 cut(s) | 188, 218 |
| Sse9I | AATT | 6 cut(s) | 247, 367, 465, 517, 552, 669 |
| SsiI | CCGC | 1 cut(s) | 559 |
| SspMI | CTAG | 4 cut(s) | 189, 219, 231, 396 |
| StyD4I | CCNGG | 1 cut(s) | 479 |
| TaaI | ACNGT | 4 cut(s) | 254, 272, 588, 626 |
| TaqI | TCGA | 3 cut(s) | 93, 156, 621 |
| TasI | AATT | 6 cut(s) | 247, 367, 465, 517, 552, 669 |
| TatI | WGTACW | 1 cut(s) | 629 |
| TauI | GCSGC | 1 cut(s) | 562 |
| TfiI | GAWTC | 4 cut(s) | 119, 136, 167, 390 |
| TscAI | CASTG | 1 cut(s) | 327 |
| TseFI | GTSAC | 2 cut(s) | 438, 582 |
| TseI | GCWGC | 1 cut(s) | 356 |
| Tsp45I | GTSAC | 2 cut(s) | 438, 582 |
| TspDTI | ATGAA | 1 cut(s) | 554 |
| TspGWI | ACGGA | 1 cut(s) | 519 |
| TspRI | CASTG | 1 cut(s) | 327 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 334 |
| XspI | CTAG | 4 cut(s) | 189, 219, 231, 396 |
| ZrmI | AGTACT | 1 cut(s) | 631 |