ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G80730 |
| fragaria_vesca | FvH4_6g28840 |
| malus_domestica | MD09G1224100.v1.1 MD17G1221300.v1.1 |
| prunus_persica | Prupe.3G096400_v2.0.a1 |
| pyrus_communis | pycom17g22570 |
| rosa_chinensis | RchiOBHm_Chr2g0133371 |
| rosa_laevigata | RLG00000019327 |
| rosa_multiflora | Rmu_sc0003874.1_g000010 Rmu_sc0038578.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00111220 |
| rosa_rugosa | Rorug02G0311200 |
| rosa_samantha | Rh2AG363800 Rh2BG369700 Rh2CG347000 Rh2DG386500 |
| rosa_wichuraiana | Rw2G029610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 202 |
| Acc36I | ACCTGC | 2 cut(s) | 622, 1084 |
| Acc65I | GGTACC | 1 cut(s) | 1014 |
| AccB1I | GGYRCC | 3 cut(s) | 217, 822, 1014 |
| AccBSI | CCGCTC | 1 cut(s) | 351 |
| AccII | CGCG | 2 cut(s) | 14, 172 |
| AciI | CCGC | 6 cut(s) | 45, 172, 195, 351, 1087, 1098 |
| AclWI | GGATC | 6 cut(s) | 74, 361, 639, 731, 1098, 1111 |
| AcsI | RAATTY | 1 cut(s) | 508 |
| AcyI | GRCGYC | 1 cut(s) | 199 |
| AfaI | GTAC | 5 cut(s) | 570, 730, 748, 1016, 1159 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 124, 125, 157, 286, 287, 365, 666, 950, 1082 |
| AgeI | ACCGGT | 1 cut(s) | 380 |
| AgsI | TTSAA | 8 cut(s) | 209, 338, 513, 673, 709, 961, 983, 1231 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 468 |
| AhlI | ACTAGT | 3 cut(s) | 725, 749, 1154 |
| AjnI | CCWGG | 2 cut(s) | 342, 1010 |
| AluBI | AGCT | 3 cut(s) | 485, 605, 1261 |
| AluI | AGCT | 3 cut(s) | 485, 605, 1261 |
| Alw26I | GTCTC | 5 cut(s) | 529, 716, 895, 1048, 1145 |
| AlwI | GGATC | 6 cut(s) | 74, 361, 639, 731, 1098, 1111 |
| ApeKI | GCWGC | 2 cut(s) | 448, 1094 |
| ApoI | RAATTY | 1 cut(s) | 508 |
| AsiGI | ACCGGT | 1 cut(s) | 380 |
| Asp718I | GGTACC | 1 cut(s) | 1014 |
| AspLEI | GCGC | 2 cut(s) | 14, 50 |
| AspS9I | GGNCC | 1 cut(s) | 114 |
| AsuHPI | GGTGA | 4 cut(s) | 348, 358, 370, 380 |
| AvaII | GGWCC | 1 cut(s) | 114 |
| AxyI | CCTNAGG | 1 cut(s) | 156 |
| BaeGI | GKGCMC | 2 cut(s) | 222, 825 |
| BamHI | GGATCC | 1 cut(s) | 1103 |
| BanI | GGYRCC | 3 cut(s) | 217, 822, 1014 |
| BanII | GRGCYC | 1 cut(s) | 238 |
| BauI | CACGAG | 2 cut(s) | 106, 431 |
| BbsI | GAAGAC | 2 cut(s) | 1110, 1238 |
| BbvI | GCAGC | 2 cut(s) | 460, 1081 |
| BceAI | ACGGC | 2 cut(s) | 21, 39 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 437, 471 |
| BciT130I | CCWGG | 2 cut(s) | 344, 1012 |
| BclI | TGATCA | 2 cut(s) | 370, 1066 |
| BcoDI | GTCTC | 5 cut(s) | 529, 716, 895, 1048, 1145 |
| BcuI | ACTAGT | 3 cut(s) | 725, 749, 1154 |
| BfaI | CTAG | 5 cut(s) | 726, 750, 762, 927, 1155 |
| BfmI | CTRYAG | 1 cut(s) | 615 |
| BfoI | RGCGCY | 1 cut(s) | 51 |
| BfuAI | ACCTGC | 2 cut(s) | 622, 1084 |
| BglII | AGATCT | 1 cut(s) | 56 |
| BisI | GCNGC | 6 cut(s) | 46, 173, 449, 1088, 1095, 1098 |
| BlsI | GCNGC | 6 cut(s) | 47, 174, 450, 1089, 1096, 1099 |
| BmcAI | AGTACT | 2 cut(s) | 730, 1159 |
| Bme1390I | CCNGG | 2 cut(s) | 344, 1012 |
| Bme18I | GGWCC | 1 cut(s) | 114 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 468 |
| BmgT120I | GGNCC | 1 cut(s) | 114 |
| BmiI | GGNNCC | 6 cut(s) | 116, 219, 235, 824, 1016, 1105 |
| BmrFI | CCNGG | 2 cut(s) | 344, 1012 |
| BmsI | GCATC | 1 cut(s) | 92 |
| BpiI | GAAGAC | 2 cut(s) | 1110, 1238 |
| BplI | GAGNNNNNCTC | 1 cut(s) | 33 |
| BpuEI | CTTGAG | 1 cut(s) | 465 |
| BsaBI | GATNNNNATC | 1 cut(s) | 582 |
| BsaHI | GRCGYC | 1 cut(s) | 199 |
| BsaJI | CCNNGG | 1 cut(s) | 213 |
| BsaWI | WCCGGW | 3 cut(s) | 138, 380, 1177 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 124, 125, 157, 286, 287, 365, 666, 950, 1082 |
| Bse118I | RCCGGY | 1 cut(s) | 380 |
| Bse1I | ACTGG | 2 cut(s) | 566, 858 |
| Bse21I | CCTNAGG | 1 cut(s) | 156 |
| Bse8I | GATNNNNATC | 1 cut(s) | 582 |
| BseBI | CCWGG | 2 cut(s) | 344, 1012 |
| BseDI | CCNNGG | 1 cut(s) | 213 |
| BseGI | GGATG | 1 cut(s) | 107 |
| BseJI | GATNNNNATC | 1 cut(s) | 582 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 124, 125, 157, 286, 287, 365, 666, 950, 1082 |
| BseMII | CTCAG | 4 cut(s) | 170, 512, 906, 1043 |
| BseNI | ACTGG | 2 cut(s) | 566, 858 |
| BseRI | GAGGAG | 1 cut(s) | 140 |
| BseSI | GKGCMC | 2 cut(s) | 222, 825 |
| BseXI | GCAGC | 2 cut(s) | 460, 1081 |
| BseYI | CCCAGC | 1 cut(s) | 124 |
| BsgI | GTGCAG | 2 cut(s) | 467, 906 |
| Bsh1236I | CGCG | 2 cut(s) | 14, 172 |
| BshNI | GGYRCC | 3 cut(s) | 217, 822, 1014 |
| BshTI | ACCGGT | 1 cut(s) | 380 |
| BsiSI | CCGG | 3 cut(s) | 139, 381, 1178 |
| BslFI | GGGAC | 2 cut(s) | 100, 1255 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 124, 125, 157, 286, 287, 365, 666, 950, 1082 |
| BsmAI | GTCTC | 5 cut(s) | 529, 716, 895, 1048, 1145 |
| BsmFI | GGGAC | 2 cut(s) | 100, 1255 |
| BsmI | GAATGC | 1 cut(s) | 988 |
| Bsp1286I | GDGCHC | 3 cut(s) | 222, 238, 825 |
| BspACI | CCGC | 6 cut(s) | 45, 172, 195, 351, 1087, 1098 |
| BspCNI | CTCAG | 4 cut(s) | 169, 511, 905, 1044 |
| BspFNI | CGCG | 2 cut(s) | 14, 172 |
| BspHI | TCATGA | 2 cut(s) | 754, 1246 |
| BspLI | GGNNCC | 6 cut(s) | 116, 219, 235, 824, 1016, 1105 |
| BspMAI | CTGCAG | 1 cut(s) | 619 |
| BspMI | ACCTGC | 2 cut(s) | 622, 1084 |
| BspPI | GGATC | 6 cut(s) | 74, 361, 639, 731, 1098, 1111 |
| BspT107I | GGYRCC | 3 cut(s) | 217, 822, 1014 |
| BsrBI | CCGCTC | 1 cut(s) | 351 |
| BsrFI | RCCGGY | 1 cut(s) | 380 |
| BsrI | ACTGG | 2 cut(s) | 566, 858 |
| BssAI | RCCGGY | 1 cut(s) | 380 |
| BssECI | CCNNGG | 1 cut(s) | 213 |
| BssNI | GRCGYC | 1 cut(s) | 199 |
| BssSI | CACGAG | 2 cut(s) | 106, 431 |
| BssT1I | CCWWGG | 1 cut(s) | 213 |
| Bst2BI | CACGAG | 2 cut(s) | 106, 431 |
| Bst2UI | CCWGG | 2 cut(s) | 344, 1012 |
| Bst4CI | ACNGT | 5 cut(s) | 389, 395, 407, 785, 803 |
| BstACI | GRCGYC | 1 cut(s) | 199 |
| BstC8I | GCNNGC | 3 cut(s) | 10, 52, 1092 |
| BstDEI | CTNAG | 6 cut(s) | 156, 364, 498, 635, 892, 1052 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 155, 363 |
| BstF5I | GGATG | 1 cut(s) | 107 |
| BstFNI | CGCG | 2 cut(s) | 14, 172 |
| BstH2I | RGCGCY | 1 cut(s) | 51 |
| BstHHI | GCGC | 2 cut(s) | 14, 50 |
| BstMAI | GTCTC | 5 cut(s) | 529, 716, 895, 1048, 1145 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 51, 84, 863 |
| BstNI | CCWGG | 2 cut(s) | 344, 1012 |
| BstNSI | RCATGY | 1 cut(s) | 478 |
| BstSCI | CCNGG | 2 cut(s) | 342, 1010 |
| BstSFI | CTRYAG | 1 cut(s) | 615 |
| BstSLI | GKGCMC | 2 cut(s) | 222, 825 |
| BstUI | CGCG | 2 cut(s) | 14, 172 |
| BstV1I | GCAGC | 2 cut(s) | 460, 1081 |
| BstV2I | GAAGAC | 2 cut(s) | 1110, 1238 |
| BstX2I | RGATCY | 4 cut(s) | 56, 66, 631, 1103 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 229, 815 |
| BstYI | RGATCY | 4 cut(s) | 56, 66, 631, 1103 |
| Bsu36I | CCTNAGG | 1 cut(s) | 156 |
| BtgZI | GCGATG | 1 cut(s) | 466 |
| BtsCI | GGATG | 1 cut(s) | 107 |
| BtsI | GCAGTG | 3 cut(s) | 423, 450, 873 |
| BtsIMutI | CAGTG | 4 cut(s) | 423, 450, 851, 873 |
| BveI | ACCTGC | 2 cut(s) | 622, 1084 |
| Cac8I | GCNNGC | 3 cut(s) | 10, 52, 1092 |
| CciI | TCATGA | 2 cut(s) | 754, 1246 |
| CfoI | GCGC | 2 cut(s) | 14, 50 |
| Cfr10I | RCCGGY | 1 cut(s) | 380 |
| Cfr13I | GGNCC | 1 cut(s) | 114 |
| CseI | GACGC | 2 cut(s) | 178, 688 |
| Csp6I | GTAC | 5 cut(s) | 569, 729, 747, 1015, 1158 |
| CspAI | ACCGGT | 1 cut(s) | 380 |
| CviAII | CATG | 8 cut(s) | 27, 475, 755, 931, 950, 1108, 1138, 1247 |
| CviQI | GTAC | 5 cut(s) | 569, 729, 747, 1015, 1158 |
| DdeI | CTNAG | 6 cut(s) | 156, 364, 498, 635, 892, 1052 |
| DriI | GACNNNNNGTC | 1 cut(s) | 468 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 468 |
| Eco130I | CCWWGG | 1 cut(s) | 213 |
| Eco24I | GRGCYC | 1 cut(s) | 238 |
| Eco47I | GGWCC | 1 cut(s) | 114 |
| Eco81I | CCTNAGG | 1 cut(s) | 156 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 155, 363 |
| EcoO109I | RGGNCCY | 1 cut(s) | 114 |
| EcoRII | CCWGG | 2 cut(s) | 342, 1010 |
| EcoT14I | CCWWGG | 1 cut(s) | 213 |
| EcoT38I | GRGCYC | 1 cut(s) | 238 |
| ErhI | CCWWGG | 1 cut(s) | 213 |
| FaeI | CATG | 8 cut(s) | 30, 478, 758, 934, 953, 1111, 1141, 1250 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1250, 1282 |
| FaqI | GGGAC | 2 cut(s) | 100, 1255 |
| FatI | CATG | 8 cut(s) | 26, 474, 754, 930, 949, 1107, 1137, 1246 |
| FauNDI | CATATG | 2 cut(s) | 187, 439 |
| FbaI | TGATCA | 2 cut(s) | 370, 1066 |
| Fnu4HI | GCNGC | 6 cut(s) | 46, 173, 449, 1088, 1095, 1098 |
| FokI | GGATG | 1 cut(s) | 114 |
| FriOI | GRGCYC | 1 cut(s) | 238 |
| Fsp4HI | GCNGC | 6 cut(s) | 46, 173, 449, 1088, 1095, 1098 |
| FspBI | CTAG | 5 cut(s) | 726, 750, 762, 927, 1155 |
| GlaI | GCGC | 2 cut(s) | 13, 49 |
| GluI | GCNGC | 6 cut(s) | 46, 173, 449, 1088, 1095, 1098 |
| GsaI | CCCAGC | 1 cut(s) | 128 |
| HaeII | RGCGCY | 1 cut(s) | 51 |
| HapII | CCGG | 3 cut(s) | 139, 381, 1178 |
| HgaI | GACGC | 2 cut(s) | 178, 688 |
| HhaI | GCGC | 2 cut(s) | 14, 50 |
| Hin1I | GRCGYC | 1 cut(s) | 199 |
| Hin1II | CATG | 8 cut(s) | 30, 478, 758, 934, 953, 1111, 1141, 1250 |
| Hin6I | GCGC | 2 cut(s) | 12, 48 |
| HinP1I | GCGC | 2 cut(s) | 12, 48 |
| HindIII | AAGCTT | 2 cut(s) | 483, 1259 |
| HinfI | GANTC | 2 cut(s) | 16, 921 |
| HpaII | CCGG | 3 cut(s) | 139, 381, 1178 |
| HphI | GGTGA | 4 cut(s) | 348, 358, 370, 380 |
| Hpy188I | TCNGA | 8 cut(s) | 490, 505, 661, 666, 721, 895, 1053, 1167 |
| Hpy188III | TCNNGA | 5 cut(s) | 99, 433, 755, 1150, 1247 |
| Hpy99I | CGWCG | 2 cut(s) | 172, 704 |
| HpyAV | CCTTC | 3 cut(s) | 157, 1017, 1137 |
| HpyCH4III | ACNGT | 5 cut(s) | 389, 395, 407, 785, 803 |
| HpyCH4IV | ACGT | 2 cut(s) | 199, 1198 |
| HpyCH4V | TGCA | 9 cut(s) | 443, 448, 617, 777, 887, 949, 988, 1079, 1255 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 51, 84, 863 |
| HpyF3I | CTNAG | 6 cut(s) | 156, 364, 498, 635, 892, 1052 |
| HpySE526I | ACGT | 2 cut(s) | 199, 1198 |
| Hsp92I | GRCGYC | 1 cut(s) | 199 |
| Hsp92II | CATG | 8 cut(s) | 30, 478, 758, 934, 953, 1111, 1141, 1250 |
| HspAI | GCGC | 2 cut(s) | 12, 48 |
| KpnI | GGTACC | 1 cut(s) | 1018 |
| Ksp22I | TGATCA | 2 cut(s) | 370, 1066 |
| LmnI | GCTCC | 2 cut(s) | 233, 610 |
| Lsp1109I | GCAGC | 2 cut(s) | 460, 1081 |
| LweI | GCATC | 1 cut(s) | 92 |
| MaeI | CTAG | 5 cut(s) | 726, 750, 762, 927, 1155 |
| MaeII | ACGT | 2 cut(s) | 199, 1198 |
| MaeIII | GTNAC | 8 cut(s) | 328, 383, 389, 401, 407, 433, 470, 969 |
| MbiI | CCGCTC | 1 cut(s) | 351 |
| MboII | GAAGA | 4 cut(s) | 587, 1110, 1113, 1243 |
| MfeI | CAATTG | 1 cut(s) | 1080 |
| MflI | RGATCY | 4 cut(s) | 56, 66, 631, 1103 |
| MhlI | GDGCHC | 3 cut(s) | 222, 238, 825 |
| MluCI | AATT | 7 cut(s) | 303, 508, 778, 996, 1045, 1080, 1191 |
| MlyI | GAGTC | 1 cut(s) | 10 |
| MmeI | TCCRAC | 1 cut(s) | 672 |
| MseI | TTAA | 1 cut(s) | 248 |
| MslI | CAYNNNNRTG | 1 cut(s) | 828 |
| MspA1I | CMGCKG | 1 cut(s) | 1100 |
| MspI | CCGG | 3 cut(s) | 139, 381, 1178 |
| MspR9I | CCNGG | 2 cut(s) | 344, 1012 |
| MunI | CAATTG | 1 cut(s) | 1080 |
| Mva1269I | GAATGC | 1 cut(s) | 988 |
| MvaI | CCWGG | 2 cut(s) | 344, 1012 |
| MvnI | CGCG | 2 cut(s) | 14, 172 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 51, 84, 863 |
| NdeI | CATATG | 2 cut(s) | 187, 439 |
| NlaIII | CATG | 8 cut(s) | 30, 478, 758, 934, 953, 1111, 1141, 1250 |
| NlaIV | GGNNCC | 6 cut(s) | 116, 219, 235, 824, 1016, 1105 |
| NmuCI | GTSAC | 3 cut(s) | 433, 470, 969 |
| NspI | RCATGY | 1 cut(s) | 478 |
| PagI | TCATGA | 2 cut(s) | 754, 1246 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 11, 699, 1121 |
| PctI | GAATGC | 1 cut(s) | 988 |
| PfeI | GAWTC | 1 cut(s) | 921 |
| PflFI | GACNNNGTC | 1 cut(s) | 698 |
| PinAI | ACCGGT | 1 cut(s) | 380 |
| PkrI | GCNGC | 6 cut(s) | 47, 174, 450, 1089, 1096, 1099 |
| PleI | GAGTC | 1 cut(s) | 10 |
| PpsI | GAGTC | 1 cut(s) | 10 |
| PpuMI | RGGWCCY | 1 cut(s) | 114 |
| Psp5II | RGGWCCY | 1 cut(s) | 114 |
| Psp6I | CCWGG | 2 cut(s) | 342, 1010 |
| PspFI | CCCAGC | 1 cut(s) | 124 |
| PspGI | CCWGG | 2 cut(s) | 342, 1010 |
| PspN4I | GGNNCC | 6 cut(s) | 116, 219, 235, 824, 1016, 1105 |
| PspPI | GGNCC | 1 cut(s) | 114 |
| PspPPI | RGGWCCY | 1 cut(s) | 114 |
| PstI | CTGCAG | 1 cut(s) | 619 |
| PsuI | RGATCY | 4 cut(s) | 56, 66, 631, 1103 |
| PsyI | GACNNNGTC | 1 cut(s) | 698 |
| RsaI | GTAC | 5 cut(s) | 570, 730, 748, 1016, 1159 |
| RsaNI | GTAC | 5 cut(s) | 569, 729, 747, 1015, 1158 |
| RseI | CAYNNNNRTG | 1 cut(s) | 828 |
| SaqAI | TTAA | 1 cut(s) | 248 |
| SatI | GCNGC | 6 cut(s) | 46, 173, 449, 1088, 1095, 1098 |
| Sau96I | GGNCC | 1 cut(s) | 114 |
| ScaI | AGTACT | 2 cut(s) | 730, 1159 |
| SchI | GAGTC | 1 cut(s) | 10 |
| ScrFI | CCNGG | 2 cut(s) | 344, 1012 |
| SduI | GDGCHC | 3 cut(s) | 222, 238, 825 |
| SfaNI | GCATC | 1 cut(s) | 92 |
| SfcI | CTRYAG | 1 cut(s) | 615 |
| SinI | GGWCC | 1 cut(s) | 114 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 828 |
| SmlI | CTYRAG | 1 cut(s) | 480 |
| SmoI | CTYRAG | 1 cut(s) | 480 |
| SpeI | ACTAGT | 3 cut(s) | 725, 749, 1154 |
| Sse9I | AATT | 7 cut(s) | 303, 508, 778, 996, 1045, 1080, 1191 |
| SsiI | CCGC | 6 cut(s) | 45, 172, 195, 351, 1087, 1098 |
| SspMI | CTAG | 5 cut(s) | 726, 750, 762, 927, 1155 |
| StyD4I | CCNGG | 2 cut(s) | 342, 1010 |
| StyI | CCWWGG | 1 cut(s) | 213 |
| TaaI | ACNGT | 5 cut(s) | 389, 395, 407, 785, 803 |
| TaiI | ACGT | 2 cut(s) | 202, 1201 |
| TaqI | TCGA | 6 cut(s) | 309, 461, 693, 702, 1124, 1149 |
| TasI | AATT | 7 cut(s) | 303, 508, 778, 996, 1045, 1080, 1191 |
| TatI | WGTACW | 2 cut(s) | 728, 1157 |
| TauI | GCSGC | 4 cut(s) | 48, 175, 1090, 1100 |
| TfiI | GAWTC | 1 cut(s) | 921 |
| Tru1I | TTAA | 1 cut(s) | 248 |
| Tru9I | TTAA | 1 cut(s) | 248 |
| TscAI | CASTG | 4 cut(s) | 430, 450, 858, 873 |
| TseFI | GTSAC | 3 cut(s) | 433, 470, 969 |
| TseI | GCWGC | 2 cut(s) | 448, 1094 |
| Tsp45I | GTSAC | 3 cut(s) | 433, 470, 969 |
| TspDTI | ATGAA | 1 cut(s) | 174 |
| TspRI | CASTG | 4 cut(s) | 430, 450, 858, 873 |
| Tth111I | GACNNNGTC | 1 cut(s) | 698 |
| VpaK11BI | GGWCC | 1 cut(s) | 114 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 155, 363 |
| XapI | RAATTY | 1 cut(s) | 508 |
| XceI | RCATGY | 1 cut(s) | 478 |
| XspI | CTAG | 5 cut(s) | 726, 750, 762, 927, 1155 |
| ZraI | GACGTC | 1 cut(s) | 200 |
| ZrmI | AGTACT | 2 cut(s) | 730, 1159 |