Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0015190

Physical Location & Seq

Genomic Coordinates Forward (+)

30530776 .. 30536648

Gene Structure 5873 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g38590.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2574 bp

ATGGCGAACGTCTCGGTCGCCGCGGAGTGGCAGCTCCTCTACAACCGCTACTACCGCAAGCCCGAGGTCTACCGCATGACGTGGAGCCACGTGGACTTGAGCCGCAACAAGGTCGCCTGCGCCCCCTTCGGTGGCCCCATCGCCGTCATCCGTGACGACTCCAAGATCGTCCAGCTCCGCGGCGAGTCCGCCCAGCGCAAGCTCCGCATCTTCAATTCCTCGGGCCTTCTACTCGGCGAGACCATCTGGAAACACCCCGGCGGAAGATTGATCGGAATGTCCTGGACCGACGACCAAACCCTAGTCTGCCTCGTCCAGGACGGCACCGTCTATCGGTACAACATCCTCGCCGAGATCGTCGAGCCGAGCATCTCCATGGGGAAGGAGTGCTTCGAGCGCAACGTCGTCGATTGCGTGTTTTGGGGAAACGGCGTCGTTTGCATCACCGAGTCGAATCAGCTGTTTTGCGTTTCGGATTTCCAGAACCCGAACCCGGTCCAGCTGGCCGACCCGGGGATCGAGGACCCGCCGTACTGTATGGCCGTGATCGAGCCGCAGTACACTATGTCTGGTAATGTGGAGGTTCTGCTTGGGATTTCGGAGCCTTGGGTTTTGGCGGTGGAGGAAGACGGCGTGCAGCAGTTAGGCGTCGACGTCCTACGTGGACCGCTGCAGAAGATGGCGGTCTCTCGCGATGGTCAATGGCTCGCTTCGTTCACTCACGACGGTCGCTTGTTGGTCATGACTTCGAATCTCAATGAAATCTTAATCGAGCAGGAATGCGAGTCTGCGCTTCCTCCGGAACAGCTGGCGTGGTGTGGAATGGACACGGTGTTGTTGTATTGGGACGATATACTGTTAATGATGGGTCCTCGAGGGGACCCGGTGCGGTACTTTTACGATGAACCAATTATTCTCATACCGGAGTGTGATGGAGTGAGGATATTGTCGAACTCCAGCATGGAATTGCTTCAACGAGTGCCTGATTCTACTGAATCCATCTTTAAGATTGGAAGTACGTCGCCTGCGGCTTTGTTGTTCGATGCTTTGGATCATTTTGACAGACGAAGTGCTAAGGCAGATGAGAATTTGCGACTAATACGTGCATCATTGTCGGAGGCTGTTGAAGCATGTATTGATGCTGCCGGTCATGAATTTGATCTCTCACGTCAACAAACACTGCTAAGAGCTGCAAGCTATGGTCAAGCTTTTTGCAGCAATTTTCAACGTGATCATATTCAAGAGATGTGTAAAACGTTGCGAGTATTAAATGCTGTGCGGCATCCTGATGTTGGAATGCCTCTTAGTATTCAACAATACAAGTTGCTTACACCGTCTGTTCTGATCGGTCGTTTGATTAATTCCTACAAGCATCTTCTTGCACTACGGATATCAGAATACCTTGGAATGAATCAAGAAATGGTGATAATGCACTGGACATGTTCGAAGATAACAGCTTCCCTGGCAATTCCTGATGCAACTCTCCTTGAAATCTTACTTGAGAAGTTGAAACTATCCAAAGGAATATCCTACGCAGCAGTTGCTGCTCATGCAGATAAGAATGGCCGCCGGAAGTTAGCTGCTATGCTTGTTGAACATGAACCGCGGTCCTCCAAGCAGGTTCCTCTCTTGTTGAGCATTGGAGAAGAAGACACAGCTTTAATGAAGGCAATTGAAAGTGGTGATACAGACCTTGTTTATCTTGTTCTTTTTCATATCTGGCAAAAGAGAGAACCTTTGGCATTTTTCAAAATGATACACCCGAAACCCCTGGCGCGTGATTTGTTTGTGATTTATGCACGGTGCTATAATCATGAATTTTTGAAGGACTTCTTCCTATCGGCTGGACAACTTCAAGAAGTGGCTTTCCTTGTGTGGAAAGAATCTTGGGAACTCGGAAAAAATCCAATGGCAAGCAGAGGATCTCCCCTGCATAATCCGCGCATTAAATTAATTGACCAGACCAAGTCTCTCTTCGAAGGAGCTAATAAGGATAAGGAATCCAATAGTCTCTTTGGAGAAGCTAATAAGGATAAGGACTTTACCTTTGAGTCAAAGGCTGCTGAGGAACATTCAAAATTGTTGAGGGCGCAGCATGGTCTAGAAGTGTCAACAAAGCAGGCTATTTTTGTTGATTCTAGTATCAGTGATACCATTCGAACTTGTATTGTGCTGGGAAATCATAAAGCAGCAATGAAAGTGAAAACTGATTTTAAGGTTTCTGAGAAGAGATGGTATTGGCTGAAAGCTTTTGCTCTGGCTACAGTCAGAGATTGGGATACCCTGGAGAAGTTTTCAAAAGAAAAGAGACCACCAATTGGGTTTAGGCCATTTGTTGAGGCATGCATTGAAGCAGATGAAAAAGGGGAAGCATTGAAATATATCCCAAAACTCACAGATCCTCGAGAAAGAGCTGAGGCTTATGGTCGGATTGGCATGGCCAAGGAAGCTGCTGATGCTGCCTCTCAGGCAAATGATGGGGAATTGCTTGGTCGACTGAGATCGACGTTTTCACAAAATCCTGCAGCTTCATCAATTTTTGATACTATTCGAGATAAATTGGGTGTGTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000325 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005773 GO:0005774 GO:0005856 GO:0006810 GO:0006906 GO:0006996 GO:0007033 GO:0008092 GO:0008150 GO:0009705 GO:0009987 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016197 GO:0030897 GO:0031090 GO:0031338 GO:0031410 GO:0031982 GO:0032879 GO:0032889 GO:0032991 GO:0033043 GO:0033263 GO:0035542 GO:0042144 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0044087 GO:0044088 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045992 GO:0045995 GO:0046907 GO:0048284 GO:0048519 GO:0050789 GO:0050793 GO:0050794 GO:0051049 GO:0051093 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051469 GO:0051641 GO:0051649 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0071840 GO:0090174 GO:0097576 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:0099023 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Vps16_C Vps16_N

Protein Analysis

858

Amino Acids

96.38

Weight (kDa)

5.82

Isoelectric Point (pI)

40.75

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Vps16_N	PF04841	8 - 412	1e-83	Vps16, N-terminal region
Vps16_C	PF04840	509 - 614	5e-22	Vps16, C-terminal region
Vps16_C	PF04840	711 - 875	4.2e-38	Vps16, C-terminal region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015190)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38020 AT2G38020
fragaria_vesca	FvH4_6g38590 FvH4_6g38590
malus_domestica	MD17G1136200.v1.1
prunus_persica	Prupe.3G176600_v2.0.a1 Prupe.3G176600_v2.0.a1
pyrus_communis	pycom17g12990
rosa_chinensis	RchiOBHm_Chr2g0152001
rosa_laevigata	RLG00000020599
rosa_multiflora	Rmu_sc0017048.1_g000002
rosa_roxburghii	Rroxscaffold_2G00096060
rosa_rugosa	Rorug02G0430200 Rorug02G0430300
rosa_samantha	Rh2BG503200
rosa_wichuraiana	Rw2G040350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	326
AatII	GACGTC	1 cut(s)	657
AbsI	CCTCGAGG	1 cut(s)	873
Acc36I	ACCTGC	1 cut(s)	1609
AccB1I	GGYRCC	1 cut(s)	323
AccB7I	CCANNNNNTGG	1 cut(s)	2318
AccI	GTMKAC	3 cut(s)	69, 651, 2494
AccII	CGCG	6 cut(s)	23, 180, 693, 1606, 1777, 1942
AccIII	TCCGGA	1 cut(s)	799
AclI	AACGTT	1 cut(s)	1256
AclWI	GGATC	4 cut(s)	524, 1059, 1930, 2393
AcoI	YGGCCR	4 cut(s)	504, 540, 1564, 2439
AcsI	RAATTY	3 cut(s)	1087, 1154, 1817
AcvI	CACGTG	1 cut(s)	91
AcyI	GRCGYC	3 cut(s)	432, 648, 654
AfaI	GTAC	5 cut(s)	338, 533, 560, 893, 1018
AfiI	CCNNNNNNNGG	9 cut(s)	27, 109, 131, 316, 333, 493, 513, 1292, 2318
AflIII	ACRYGT	1 cut(s)	1439
AjiI	CACGTC	2 cut(s)	81, 1169
AjnI	CCWGG	5 cut(s)	281, 315, 1461, 1770, 2283
AjuI	GAANNNNNNNTTGG	2 cut(s)	1958, 1990
Alw26I	GTCTC	6 cut(s)	16, 233, 691, 1974, 2015, 2302
AlwI	GGATC	4 cut(s)	524, 1059, 1930, 2393
AlwNI	CAGNNNCTG	1 cut(s)	1544
Ama87I	CYCGRG	5 cut(s)	62, 220, 511, 873, 2403
Aor13HI	TCCGGA	1 cut(s)	799
AoxI	GGCC	7 cut(s)	133, 223, 504, 540, 1564, 2327, 2439
ApoI	RAATTY	3 cut(s)	1087, 1154, 1817
ArsI	GACNNNNNNTTYG	2 cut(s)	2030, 2062
AseI	ATTAAT	2 cut(s)	1359, 1952
Asp700I	GAANNNNTTC	2 cut(s)	969, 1829
AspLEI	GCGC	7 cut(s)	122, 198, 399, 793, 1777, 1944, 2092
AspS9I	GGNCC	9 cut(s)	134, 223, 285, 496, 523, 665, 869, 880, 1608
AsuC2I	CCSGG	5 cut(s)	258, 494, 512, 513, 884
AsuHPI	GGTGA	3 cut(s)	436, 1435, 1694
AsuII	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
AvaI	CYCGRG	5 cut(s)	62, 220, 511, 873, 2403
AvaII	GGWCC	7 cut(s)	285, 496, 523, 665, 869, 880, 1608
BalI	TGGCCA	1 cut(s)	2441
BanI	GGYRCC	1 cut(s)	323
BbrPI	CACGTG	1 cut(s)	91
BbsI	GAAGAC	2 cut(s)	633, 1656
BbvCI	CCTCAGC	2 cut(s)	2064, 2415
BccI	CCATC	9 cut(s)	146, 251, 673, 689, 859, 926, 1007, 2226, 2471
BceAI	ACGGC	6 cut(s)	128, 337, 445, 514, 527, 646
BcgI	CGANNNNNNTGC	6 cut(s)	94, 128, 388, 422, 1095, 1129
BciT130I	CCWGG	5 cut(s)	283, 317, 1463, 1772, 2285
BciVI	GTATCC	1 cut(s)	2272
BclI	TGATCA	1 cut(s)	1231
BcnI	CCSGG	5 cut(s)	258, 494, 512, 513, 884
BcoDI	GTCTC	6 cut(s)	16, 233, 691, 1974, 2015, 2302
BfaI	CTAG	3 cut(s)	302, 2102, 2139
BfmI	CTRYAG	3 cut(s)	671, 2262, 2523
BfuAI	ACCTGC	1 cut(s)	1609
BfuI	GTATCC	1 cut(s)	2272
BglI	GCCNNNNNGGC	1 cut(s)	2468
Bme18I	GGWCC	7 cut(s)	285, 496, 523, 665, 869, 880, 1608
BmeT110I	CYCGRG	5 cut(s)	62, 220, 511, 873, 2403
BmgBI	CACGTC	2 cut(s)	81, 1169
BmgT120I	GGNCC	9 cut(s)	134, 223, 285, 496, 523, 665, 869, 880, 1608
BmiI	GGNNCC	9 cut(s)	86, 136, 325, 525, 603, 870, 881, 882, 1623
BpiI	GAAGAC	2 cut(s)	633, 1656
BpmI	CTGGAG	2 cut(s)	940, 2306
Bpu10I	CCTNAGC	3 cut(s)	1074, 2064, 2415
Bpu14I	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
BpuEI	CTTGAG	2 cut(s)	118, 1520
BpuMI	CCSGG	5 cut(s)	258, 494, 512, 513, 884
BsaAI	YACGTR	3 cut(s)	91, 662, 1103
BsaHI	GRCGYC	3 cut(s)	432, 648, 654
BsaI	GGTCTC	3 cut(s)	233, 691, 2302
BsaWI	WCCGGW	2 cut(s)	799, 922
Bsc4I	CCNNNNNNNGG	9 cut(s)	27, 109, 131, 316, 333, 493, 513, 1292, 2318
Bse118I	RCCGGY	1 cut(s)	1145
Bse1I	ACTGG	1 cut(s)	1439
Bse3DI	GCAATG	1 cut(s)	2199
BseAI	TCCGGA	1 cut(s)	799
BseBI	CCWGG	5 cut(s)	283, 317, 1463, 1772, 2285
BseGI	GGATG	3 cut(s)	147, 342, 1282
BseLI	CCNNNNNNNGG	9 cut(s)	27, 109, 131, 316, 333, 493, 513, 1292, 2318
BseMI	GCAATG	1 cut(s)	2199
BseMII	CTCAG	5 cut(s)	2055, 2214, 2406, 2480, 2489
BseNI	ACTGG	1 cut(s)	1439
BseRI	GAGGAG	1 cut(s)	26
BseYI	CCCAGC	2 cut(s)	192, 2173
BsgI	GTGCAG	1 cut(s)	656
Bsh1236I	CGCG	6 cut(s)	23, 180, 693, 1606, 1777, 1942
Bsh1285I	CGRYCG	3 cut(s)	18, 730, 1351
BshFI	GGCC	7 cut(s)	135, 225, 506, 542, 1566, 2329, 2441
BshNI	GGYRCC	1 cut(s)	323
BsiEI	CGRYCG	3 cut(s)	18, 730, 1351
BsiHKCI	CYCGRG	5 cut(s)	62, 220, 511, 873, 2403
BsiSI	CCGG	8 cut(s)	258, 494, 512, 800, 884, 923, 1146, 1570
BslFI	GGGAC	2 cut(s)	860, 893
BslI	CCNNNNNNNGG	9 cut(s)	27, 109, 131, 316, 333, 493, 513, 1292, 2318
BsmAI	GTCTC	6 cut(s)	16, 233, 691, 1974, 2015, 2302
BsmBI	CGTCTC	1 cut(s)	16
BsmFI	GGGAC	2 cut(s)	860, 893
BsmI	GAATGC	2 cut(s)	785, 1302
BsnI	GGCC	7 cut(s)	135, 225, 506, 542, 1566, 2329, 2441
Bso31I	GGTCTC	3 cut(s)	233, 691, 2302
BsoBI	CYCGRG	5 cut(s)	62, 220, 511, 873, 2403
Bsp119I	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
Bsp13I	TCCGGA	1 cut(s)	799
Bsp19I	CCATGG	1 cut(s)	375
Bsp68I	TCGCGA	1 cut(s)	693
BspANI	GGCC	7 cut(s)	135, 225, 506, 542, 1566, 2329, 2441
BspCNI	CTCAG	5 cut(s)	2056, 2215, 2407, 2479, 2490
BspEI	TCCGGA	1 cut(s)	799
BspFNI	CGCG	6 cut(s)	23, 180, 693, 1606, 1777, 1942
BspHI	TCATGA	3 cut(s)	741, 1150, 1813
BspLI	GGNNCC	9 cut(s)	86, 136, 325, 525, 603, 870, 881, 882, 1623
BspMAI	CTGCAG	2 cut(s)	675, 2527
BspMI	ACCTGC	1 cut(s)	1609
BspPI	GGATC	4 cut(s)	524, 1059, 1930, 2393
BspT104I	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
BspT107I	GGYRCC	1 cut(s)	323
BspTNI	GGTCTC	3 cut(s)	233, 691, 2302
BsrDI	GCAATG	1 cut(s)	2199
BsrFI	RCCGGY	1 cut(s)	1145
BsrI	ACTGG	1 cut(s)	1439
BssAI	RCCGGY	1 cut(s)	1145
BssNI	GRCGYC	3 cut(s)	432, 648, 654
BssT1I	CCWWGG	4 cut(s)	375, 605, 1402, 2442
Bst2UI	CCWGG	5 cut(s)	283, 317, 1463, 1772, 2285
Bst4CI	ACNGT	8 cut(s)	328, 536, 728, 832, 858, 1335, 1803, 2266
Bst6I	CTCTTC	2 cut(s)	1979, 2222
BstACI	GRCGYC	3 cut(s)	432, 648, 654
BstAPI	GCANNNNNTGC	2 cut(s)	1541, 1544
BstBAI	YACGTR	3 cut(s)	91, 662, 1103
BstBI	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
BstDEI	CTNAG	8 cut(s)	1074, 1184, 1304, 2064, 2223, 2415, 2466, 2498
BstDSI	CCRYGG	4 cut(s)	21, 178, 375, 1604
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	3 cut(s)	147, 342, 1282
BstFNI	CGCG	6 cut(s)	23, 180, 693, 1606, 1777, 1942
BstHHI	GCGC	7 cut(s)	122, 198, 399, 793, 1777, 1944, 2092
BstMAI	GTCTC	6 cut(s)	16, 233, 691, 1974, 2015, 2302
BstMCI	CGRYCG	3 cut(s)	18, 730, 1351
BstNI	CCWGG	5 cut(s)	283, 317, 1463, 1772, 2285
BstNSI	RCATGY	3 cut(s)	1134, 1443, 2346
BstSFI	CTRYAG	3 cut(s)	671, 2262, 2523
BstUI	CGCG	6 cut(s)	23, 180, 693, 1606, 1777, 1942
BstV2I	GAAGAC	2 cut(s)	633, 1656
BstX2I	RGATCY	2 cut(s)	1922, 2398
BstYI	RGATCY	2 cut(s)	1922, 2398
BsuI	GTATCC	1 cut(s)	2272
BsuRI	GGCC	7 cut(s)	135, 225, 506, 542, 1566, 2329, 2441
BtgI	CCRYGG	4 cut(s)	21, 178, 375, 1604
BtgZI	GCGATG	2 cut(s)	124, 708
BtrI	CACGTC	2 cut(s)	81, 1169
BtsCI	GGATG	3 cut(s)	147, 342, 1282
BtsI	GCAGTG	1 cut(s)	1178
BtsIMutI	CAGTG	3 cut(s)	1178, 1432, 2152
BtuMI	TCGCGA	1 cut(s)	693
BveI	ACCTGC	1 cut(s)	1609
CaiI	CAGNNNCTG	1 cut(s)	1544
CciI	TCATGA	3 cut(s)	741, 1150, 1813
CfoI	GCGC	7 cut(s)	122, 198, 399, 793, 1777, 1944, 2092
Cfr10I	RCCGGY	1 cut(s)	1145
Cfr13I	GGNCC	9 cut(s)	134, 223, 285, 496, 523, 665, 869, 880, 1608
Cfr42I	CCGCGG	3 cut(s)	24, 181, 1607
Cfr9I	CCCGGG	1 cut(s)	511
CseI	GACGC	2 cut(s)	421, 637
Csp6I	GTAC	5 cut(s)	337, 532, 559, 892, 1017
CviQI	GTAC	5 cut(s)	337, 532, 559, 892, 1017
DdeI	CTNAG	8 cut(s)	1074, 1184, 1304, 2064, 2223, 2415, 2466, 2498
DrdI	GACNNNNNNGTC	1 cut(s)	326
DseDI	GACNNNNNNGTC	1 cut(s)	326
EaeI	YGGCCR	4 cut(s)	504, 540, 1564, 2439
Eam1104I	CTCTTC	2 cut(s)	1979, 2222
EarI	CTCTTC	2 cut(s)	1979, 2222
EciI	GGCGGA	2 cut(s)	178, 276
Eco130I	CCWWGG	4 cut(s)	375, 605, 1402, 2442
Eco31I	GGTCTC	3 cut(s)	233, 691, 2302
Eco32I	GATATC	1 cut(s)	1392
Eco47I	GGWCC	7 cut(s)	285, 496, 523, 665, 869, 880, 1608
Eco72I	CACGTG	1 cut(s)	91
Eco88I	CYCGRG	5 cut(s)	62, 220, 511, 873, 2403
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoO109I	RGGNCCY	3 cut(s)	523, 869, 880
EcoRII	CCWGG	5 cut(s)	281, 315, 1461, 1770, 2283
EcoRV	GATATC	1 cut(s)	1392
EcoT14I	CCWWGG	4 cut(s)	375, 605, 1402, 2442
EcoT22I	ATGCAT	1 cut(s)	2348
ErhI	CCWWGG	4 cut(s)	375, 605, 1402, 2442
Esp3I	CGTCTC	1 cut(s)	16
FalI	AAGNNNNNCTT	6 cut(s)	374, 406, 1817, 1849, 1958, 1990
FaqI	GGGAC	2 cut(s)	860, 893
FauI	CCCGC	1 cut(s)	534
FbaI	TGATCA	1 cut(s)	1231
FblI	GTMKAC	3 cut(s)	69, 651, 2494
FokI	GGATG	3 cut(s)	134, 329, 1269
FspBI	CTAG	3 cut(s)	302, 2102, 2139
GlaI	GCGC	7 cut(s)	121, 197, 398, 792, 1776, 1943, 2091
GsaI	CCCAGC	2 cut(s)	196, 2177
GsuI	CTGGAG	2 cut(s)	940, 2306
HaeIII	GGCC	7 cut(s)	135, 225, 506, 542, 1566, 2329, 2441
HapII	CCGG	8 cut(s)	258, 494, 512, 800, 884, 923, 1146, 1570
HgaI	GACGC	2 cut(s)	421, 637
HhaI	GCGC	7 cut(s)	122, 198, 399, 793, 1777, 1944, 2092
Hin1I	GRCGYC	3 cut(s)	432, 648, 654
Hin6I	GCGC	7 cut(s)	120, 196, 397, 791, 1775, 1942, 2090
HinP1I	GCGC	7 cut(s)	120, 196, 397, 791, 1775, 1942, 2090
HincII	GTYRAC	4 cut(s)	652, 1172, 2112, 2495
HindII	GTYRAC	4 cut(s)	652, 1172, 2112, 2495
HindIII	AAGCTT	2 cut(s)	1206, 2247
HpaII	CCGG	8 cut(s)	258, 494, 512, 800, 884, 923, 1146, 1570
HphI	GGTGA	3 cut(s)	436, 1435, 1694
Hpy166II	GTNNAC	9 cut(s)	70, 94, 561, 652, 665, 717, 1172, 2112, 2495
Hpy8I	GTNNAC	9 cut(s)	70, 94, 561, 652, 665, 717, 1172, 2112, 2495
HpyAV	CCTTC	6 cut(s)	136, 236, 376, 1660, 1819, 1973
HpyCH4III	ACNGT	8 cut(s)	328, 536, 728, 832, 858, 1335, 1803, 2266
HpyF3I	CTNAG	8 cut(s)	1074, 1184, 1304, 2064, 2223, 2415, 2466, 2498
Hsp92I	GRCGYC	3 cut(s)	432, 648, 654
HspAI	GCGC	7 cut(s)	120, 196, 397, 791, 1775, 1942, 2090
KflI	GGGWCCC	1 cut(s)	880
Kpn2I	TCCGGA	1 cut(s)	799
Ksp22I	TGATCA	1 cut(s)	1231
KspI	CCGCGG	3 cut(s)	24, 181, 1607
LmnI	GCTCC	6 cut(s)	39, 84, 180, 207, 601, 1982
MaeI	CTAG	3 cut(s)	302, 2102, 2139
MaeIII	GTNAC	1 cut(s)	152
MfeI	CAATTG	2 cut(s)	1671, 2316
MflI	RGATCY	2 cut(s)	1922, 2398
MlsI	TGGCCA	1 cut(s)	2441
MluNI	TGGCCA	1 cut(s)	2441
MlyI	GAGTC	5 cut(s)	152, 194, 458, 794, 2060
MmeI	TCCRAC	3 cut(s)	1095, 1273, 2408
Mox20I	TGGCCA	1 cut(s)	2441
Mph1103I	ATGCAT	1 cut(s)	2348
MroI	TCCGGA	1 cut(s)	799
MroXI	GAANNNNTTC	2 cut(s)	969, 1829
MscI	TGGCCA	1 cut(s)	2441
MseI	TTAA	9 cut(s)	767, 860, 1005, 1268, 1359, 1661, 1947, 1952, 2214
MslI	CAYNNNNRTG	2 cut(s)	374, 1287
Msp20I	TGGCCA	1 cut(s)	2441
MspA1I	CMGCKG	7 cut(s)	23, 180, 460, 502, 670, 808, 1606
MspI	CCGG	8 cut(s)	258, 494, 512, 800, 884, 923, 1146, 1570
MunI	CAATTG	2 cut(s)	1671, 2316
Mva1269I	GAATGC	2 cut(s)	785, 1302
MvaI	CCWGG	5 cut(s)	283, 317, 1463, 1772, 2285
MvnI	CGCG	6 cut(s)	23, 180, 693, 1606, 1777, 1942
NciI	CCSGG	5 cut(s)	258, 494, 512, 513, 884
NcoI	CCATGG	1 cut(s)	375
NlaIV	GGNNCC	9 cut(s)	86, 136, 325, 525, 603, 870, 881, 882, 1623
NmeAIII	GCCGAG	3 cut(s)	213, 376, 390
NmuCI	GTSAC	1 cut(s)	152
NruI	TCGCGA	1 cut(s)	693
NsiI	ATGCAT	1 cut(s)	2348
NspI	RCATGY	3 cut(s)	1134, 1443, 2346
NspV	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
PaeI	GCATGC	1 cut(s)	2346
PaeR7I	CTCGAG	2 cut(s)	873, 2403
PagI	TCATGA	3 cut(s)	741, 1150, 1813
PciI	ACATGT	1 cut(s)	1439
PcsI	WCGNNNNNNNCGW	3 cut(s)	354, 399, 411
PctI	GAATGC	2 cut(s)	785, 1302
PdmI	GAANNNNTTC	2 cut(s)	969, 1829
PfeI	GAWTC	8 cut(s)	454, 751, 986, 995, 1411, 1883, 2000, 2135
PflFI	GACNNNGTC	1 cut(s)	1966
PflMI	CCANNNNNTGG	1 cut(s)	2318
PfoI	TCCNGGA	2 cut(s)	281, 315
PleI	GAGTC	5 cut(s)	152, 193, 457, 793, 2059
PmaCI	CACGTG	1 cut(s)	91
PmlI	CACGTG	1 cut(s)	91
PpsI	GAGTC	5 cut(s)	152, 193, 457, 793, 2059
Ppu21I	YACGTR	3 cut(s)	91, 662, 1103
PpuMI	RGGWCCY	3 cut(s)	523, 869, 880
PscI	ACATGT	1 cut(s)	1439
PshBI	ATTAAT	2 cut(s)	1359, 1952
Psp1406I	AACGTT	1 cut(s)	1256
Psp5II	RGGWCCY	3 cut(s)	523, 869, 880
Psp6I	CCWGG	5 cut(s)	281, 315, 1461, 1770, 2283
PspCI	CACGTG	1 cut(s)	91
PspFI	CCCAGC	2 cut(s)	192, 2173
PspGI	CCWGG	5 cut(s)	281, 315, 1461, 1770, 2283
PspN4I	GGNNCC	9 cut(s)	86, 136, 325, 525, 603, 870, 881, 882, 1623
PspPI	GGNCC	9 cut(s)	134, 223, 285, 496, 523, 665, 869, 880, 1608
PspPPI	RGGWCCY	3 cut(s)	523, 869, 880
PspXI	VCTCGAGB	1 cut(s)	873
PstI	CTGCAG	2 cut(s)	675, 2527
PstNI	CAGNNNCTG	1 cut(s)	1544
PsuI	RGATCY	2 cut(s)	1922, 2398
PsyI	GACNNNGTC	1 cut(s)	1966
PvuII	CAGCTG	3 cut(s)	460, 502, 808
RruI	TCGCGA	1 cut(s)	693
RsaI	GTAC	5 cut(s)	338, 533, 560, 893, 1018
RsaNI	GTAC	5 cut(s)	337, 532, 559, 892, 1017
RseI	CAYNNNNRTG	2 cut(s)	374, 1287
SacII	CCGCGG	3 cut(s)	24, 181, 1607
SalI	GTCGAC	2 cut(s)	650, 2493
SaqAI	TTAA	9 cut(s)	767, 860, 1005, 1268, 1359, 1661, 1947, 1952, 2214
Sau96I	GGNCC	9 cut(s)	134, 223, 285, 496, 523, 665, 869, 880, 1608
SchI	GAGTC	5 cut(s)	152, 194, 458, 794, 2060
SfcI	CTRYAG	3 cut(s)	671, 2262, 2523
Sfr274I	CTCGAG	2 cut(s)	873, 2403
Sfr303I	CCGCGG	3 cut(s)	24, 181, 1607
SfuI	TTCGAA	4 cut(s)	749, 1445, 1977, 2158
SgrBI	CCGCGG	3 cut(s)	24, 181, 1607
SgrDI	CGTCGACG	1 cut(s)	650
SinI	GGWCC	7 cut(s)	285, 496, 523, 665, 869, 880, 1608
SlaI	CTCGAG	2 cut(s)	873, 2403
SmaI	CCCGGG	1 cut(s)	513
SmiMI	CAYNNNNRTG	2 cut(s)	374, 1287
SmlI	CTYRAG	4 cut(s)	97, 873, 1499, 2403
SmoI	CTYRAG	4 cut(s)	97, 873, 1499, 2403
SphI	GCATGC	1 cut(s)	2346
SspMI	CTAG	3 cut(s)	302, 2102, 2139
StyI	CCWWGG	4 cut(s)	375, 605, 1402, 2442
TaaI	ACNGT	8 cut(s)	328, 536, 728, 832, 858, 1335, 1803, 2266
TaqII	GACCGA	3 cut(s)	4, 302, 1337
TatI	WGTACW	1 cut(s)	558
TauI	GCSGC	7 cut(s)	23, 105, 183, 556, 1031, 1282, 1569
TfiI	GAWTC	8 cut(s)	454, 751, 986, 995, 1411, 1883, 2000, 2135
Tru1I	TTAA	9 cut(s)	767, 860, 1005, 1268, 1359, 1661, 1947, 1952, 2214
Tru9I	TTAA	9 cut(s)	767, 860, 1005, 1268, 1359, 1661, 1947, 1952, 2214
TscAI	CASTG	3 cut(s)	1185, 1439, 2152
TseFI	GTSAC	1 cut(s)	152
Tsp45I	GTSAC	1 cut(s)	152
TspGWI	ACGGA	2 cut(s)	140, 1402
TspMI	CCCGGG	1 cut(s)	511
TspRI	CASTG	3 cut(s)	1185, 1439, 2152
Tth111I	GACNNNGTC	1 cut(s)	1966
Van91I	CCANNNNNTGG	1 cut(s)	2318
VpaK11BI	GGWCC	7 cut(s)	285, 496, 523, 665, 869, 880, 1608
VspI	ATTAAT	2 cut(s)	1359, 1952
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	3 cut(s)	1087, 1154, 1817
XbaI	TCTAGA	1 cut(s)	2101
XceI	RCATGY	3 cut(s)	1134, 1443, 2346
XhoI	CTCGAG	2 cut(s)	873, 2403
XmaI	CCCGGG	1 cut(s)	511
XmiI	GTMKAC	3 cut(s)	69, 651, 2494
XmnI	GAANNNNTTC	2 cut(s)	969, 1829
XspI	CTAG	3 cut(s)	302, 2102, 2139
ZraI	GACGTC	1 cut(s)	655
Zsp2I	ATGCAT	1 cut(s)	2348

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.