Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp03

Orthogroup ID

OG0015190

Physical Location & Seq

Genomic Coordinates Forward (+)

19372009 .. 19379136

Gene Structure 7128 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.3G176600.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2535 bp

ATGGCCAATGTCTCGGTTGCCGCGGAGTGGCAGCTCCTCTACAACCGGTACTACCGGAAGCCCGAAATCTACCGAATGAGCTGGAAGCACGTGGAGCTCAACCGCAACAAGGTCGCCTGCGCTCCCTTCGGCGGCCCCATCGCCGTCATCCGAGACGATTCAAAGATCGTCCAACTCGGCGGAGAATCGGCGCAACGCAAGCTCCGAATCTTCAGTTCCTCGGGCCATCTCCTCGGCGAGACCATCTGGAAACACCCGGGCGGCCGATTAATCGGCATGGCCTGGACCGACGACCAAACCTTAGTCTGCCTCGTCCAGGACGGCACCGTTTTCCGCTACACCATCCACACCGAGCTCCTCGAGCCGAGCATCTCCATGGGCCAAGAGTGCTTCGAGCGAAACGTCGTGGACTGCGTCTTCTGGGGAAACGGCCTCGTTTGCATCACCGAAACGAATCAGCTGTTTTGCATTTCCGATTTCAAGAACCCGAACCCGGTTAAATTGGCCGACCCGGAGATCGAGGACCCGCCGCTTTGTATGGCGGTGATCGAGCCTCAGTACACAATGTCCGGGAATGTAGAGGTTCTGCTTGGGATTGGAGACGCTTGCGTCTTGGCTGTGGAAGAAGATGGCGTTCAGCAGCTAGGGCTTGAGGTGTTGCGTGGACCAATTCAGAAGATGGCGGTTTCGAGAGATGGACAGTGGCTTGCTTCGTTCACGCACGATGGTCGATTGTTGGTCATGACTTCGAATTTGAACGAAATCCTAATTGAGCAGGAATGTGAGTCAGCTCTTCCTCCGGAACAGTTAGCGTGGTGTGGAATGGACACAGTGTTGCTCTATTGGGATGATATTCTTTTGATGATGGGTCCTAGAGGAGATCCCGTGCGCTACTTTTATGATGAACCGATAATTCTTATTCCTGAGTGCGACGGAGTAAGGATATTATCTAACTCAAGCATGGAGTTTCTACAACGGGTGCCTGATTCCACTGAATCCATCTTCAAGATTGGAAGTACGTCACCTGCGGCATTGTTGTATGATGCTTTGGATCATTTTGACAGACAAAGTGCCAAGGCAGATGAGAATTTGCGACTAATACGCCCATCCTTGCCGGAGGCTGTTGAAGCATGTATTGATGCTGCTGGCCATGAATTTGATGTTCTACGTCAACGGACGCTCCTAAGAGCTGCAAGCTATGGCCAAGCCTTTTGCAGCAATTTTCAACGGGATCATATTCAAGAGATGTGTAAAACTTTGCGAGTTTTAAATGCTGTGCGGCATCCTGACGTTGGAATGCCTCTTAGTATTCAACAATACAAGTTGCTTACGCCATCTGTTCTGATTGGTCGTTTGATCAATTCCTACAAGCACTTTCTTGCACTACGGGTATCAGAGTACCTTGGAATGAACCAAGAGATGGTGATTATGCACTGGGCATGTTCGAAGATTTCAGCTTCCTTAGCAATTTCTGATGCCACTCTTCTTGAGATCTTACTTGATAAGTTGAAACTATGCAAAGGAATATCCTATGCAGCAGTTGCTGCACATGCAGATAAGAATGGCCGCCGGAAGTTAGCTGCTATGCTTGTTGAACATGAACCACGCTCCTCCAAACAGGTTCCTCTCTTGTTGAGCATAGGAGAAGAAGATACAGCTTTAATGAAGGCAATTGAAAGTGGTGATACAGACCTTGTTTATCTTGTTCTCTTTCATATCTGGCGAAAGAGACAACCATTGGAGTTCTTTGGAATGATACAAGCTAGAGCACTGGCACGTGATTTGTTTATAATTTATGCACGGTGCTATAAGCATGAATTCTTGAAGGACTTTTTCCTATCAACTGGACAACTTCAAGAGGTGGCTTTCCTTTTGTGGAAAGAATCTTGGGAGCTTGGAAAAAATCCAATGGCAAGCAGAGGATCTCCCCTTCATGGTCCACGCATAAAAATAATTGAGAAGGCCCAAAATCTTTTCTTAGAAACGAAGGAATATACCTTTGAGGCGAAGGCTGCTGAAGAGCATGCAAAGTTGTTGAGAATGCAGCATGACTTAGAAGTGTCAACAAAGCAGGCCATTTTTGTTGATTCCAGTATCAGTGATACAATTCGAACATGTATTGTTCTGGGAAATCATCGAGCTGCAATGAAAGTGAAAACAGAATTCAAGGTTTCTGAGAAGAGATGGTATTGGCTAAAAGTTTTTGCTTTGGCTACAATCAGAGATTGGGATGCCTTGGAGAAGTTCTCAAAGGAAAAGAGACCACCAATTGGTTACAGACCATTTGTGGAGGCATGCATCGAAGCAGATGAAAAAGGAGAAGCGTTGAAATATATCCCAAAACTCACAGATCCTCGAGAAAGAGCAGAGTCCTACGCTCGGATTGGCATGGCCAAGGAAGCTGCTGATGCTGCCTCCCAGGCAAAGGATGGTGAATTGCTTGGTCGACTAAAATTGACTTTTTCACAAAATGCTGCGGCTTCATCAATTTTTGATACTCTTAGGGACCGGTTATCTTTTCAAGGCGTTTCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000323 GO:0000325 GO:0003674 GO:0003779 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005764 GO:0005765 GO:0005768 GO:0005773 GO:0005774 GO:0005856 GO:0006810 GO:0006906 GO:0006996 GO:0007033 GO:0008092 GO:0008150 GO:0009705 GO:0009987 GO:0012505 GO:0015629 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016197 GO:0030897 GO:0031090 GO:0031338 GO:0031410 GO:0031982 GO:0032879 GO:0032889 GO:0032991 GO:0033043 GO:0033263 GO:0035542 GO:0042144 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0044087 GO:0044088 GO:0044422 GO:0044424 GO:0044425 GO:0044433 GO:0044437 GO:0044440 GO:0044444 GO:0044446 GO:0044464 GO:0045992 GO:0045995 GO:0046907 GO:0048284 GO:0048519 GO:0050789 GO:0050793 GO:0050794 GO:0051049 GO:0051093 GO:0051128 GO:0051179 GO:0051234 GO:0051239 GO:0051241 GO:0051469 GO:0051641 GO:0051649 GO:0060627 GO:0061024 GO:0061025 GO:0065007 GO:0071840 GO:0090174 GO:0097576 GO:0097708 GO:0098588 GO:0098796 GO:0098805 GO:0098852 GO:0099023 GO:2000026

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

Vps16_C Vps16_N

Protein Analysis

845

Amino Acids

95.3

Weight (kDa)

5.96

Isoelectric Point (pI)

41.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015190)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G38020 AT2G38020
fragaria_vesca	FvH4_6g38590 FvH4_6g38590
malus_domestica	MD17G1136200.v1.1
prunus_persica	Prupe.3G176600_v2.0.a1 Prupe.3G176600_v2.0.a1
pyrus_communis	pycom17g12990
rosa_chinensis	RchiOBHm_Chr2g0152001
rosa_laevigata	RLG00000020599
rosa_multiflora	Rmu_sc0017048.1_g000002
rosa_roxburghii	Rroxscaffold_2G00096060
rosa_rugosa	Rorug02G0430200 Rorug02G0430300
rosa_samantha	Rh2BG503200
rosa_wichuraiana	Rw2G040350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1790
AarI	CACCTGC	1 cut(s)	1033
AasI	GACNNNNNNGTC	1 cut(s)	608
Acc36I	ACCTGC	1 cut(s)	1033
AccB1I	GGYRCC	2 cut(s)	323, 979
AccB7I	CCANNNNNTGG	2 cut(s)	1420, 2270
AccI	GTMKAC	1 cut(s)	2446
AccII	CGCG	1 cut(s)	23
AccIII	TCCGGA	1 cut(s)	799
AclWI	GGATC	5 cut(s)	875, 1059, 1239, 1930, 2345
AcoI	YGGCCR	7 cut(s)	3, 262, 504, 1147, 1201, 1564, 2391
AcsI	RAATTY	5 cut(s)	751, 1087, 1154, 1817, 2162
AcuI	CTGAAG	2 cut(s)	196, 2037
AcvI	CACGTG	2 cut(s)	91, 1778
AfaI	GTAC	4 cut(s)	50, 560, 1018, 1400
AflIII	ACRYGT	1 cut(s)	2114
AgeI	ACCGGT	2 cut(s)	45, 2508
AjnI	CCWGG	3 cut(s)	281, 315, 2418
Alw21I	GWGCWC	3 cut(s)	99, 357, 1771
Alw26I	GTCTC	6 cut(s)	16, 147, 233, 594, 1723, 2254
AlwI	GGATC	5 cut(s)	875, 1059, 1239, 1930, 2345
AlwNI	CAGNNNCTG	1 cut(s)	1544
Ama87I	CYCGRG	4 cut(s)	220, 256, 359, 2355
Aor13HI	TCCGGA	1 cut(s)	799
ApoI	RAATTY	5 cut(s)	751, 1087, 1154, 1817, 2162
ArsI	GACNNNNNNTTYG	2 cut(s)	736, 768
AseI	ATTAAT	1 cut(s)	269
AsiGI	ACCGGT	2 cut(s)	45, 2508
AspLEI	GCGC	3 cut(s)	122, 193, 891
AsuC2I	CCSGG	5 cut(s)	257, 258, 494, 512, 571
AsuHPI	GGTGA	6 cut(s)	436, 556, 1014, 1435, 1694, 2444
AsuII	TTCGAA	3 cut(s)	749, 1445, 2110
AvaI	CYCGRG	4 cut(s)	220, 256, 359, 2355
AvaII	GGWCC	6 cut(s)	285, 523, 665, 869, 1937, 2506
BalI	TGGCCA	4 cut(s)	5, 1149, 1203, 2393
BanI	GGYRCC	2 cut(s)	323, 979
BanII	GRGCYC	2 cut(s)	99, 357
BbrPI	CACGTG	2 cut(s)	91, 1778
BbsI	GAAGAC	1 cut(s)	409
Bbv12I	GWGCWC	3 cut(s)	99, 357, 1771
BceAI	ACGGC	3 cut(s)	128, 337, 445
BcgI	CGANNNNNNTGC	4 cut(s)	94, 128, 710, 744
BciT130I	CCWGG	3 cut(s)	283, 317, 2420
BclI	TGATCA	1 cut(s)	1356
BcnI	CCSGG	5 cut(s)	257, 258, 494, 512, 571
BcoDI	GTCTC	6 cut(s)	16, 147, 233, 594, 1723, 2254
BfaI	CTAG	3 cut(s)	644, 873, 1764
BfuAI	ACCTGC	1 cut(s)	1033
BglI	GCCNNNNNGGC	1 cut(s)	2420
BglII	AGATCT	1 cut(s)	1491
Bme1390I	CCNGG	8 cut(s)	257, 258, 283, 317, 494, 512, 571, 2420
Bme18I	GGWCC	6 cut(s)	285, 523, 665, 869, 1937, 2506
BmeT110I	CYCGRG	4 cut(s)	220, 256, 359, 2355
BmiI	GGNNCC	7 cut(s)	136, 325, 525, 870, 981, 1623, 2507
BmrFI	CCNGG	8 cut(s)	257, 258, 283, 317, 494, 512, 571, 2420
BmrI	ACTGGG	1 cut(s)	1444
BmsI	GCATC	9 cut(s)	378, 450, 1033, 1129, 1291, 1465, 2221, 2307, 2398
BmuI	ACTGGG	1 cut(s)	1444
BpiI	GAAGAC	1 cut(s)	409
BplI	GAGNNNNNCTC	2 cut(s)	2231, 2263
Bpu10I	CCTNAGC	1 cut(s)	1462
Bpu14I	TTCGAA	3 cut(s)	749, 1445, 2110
BpuEI	CTTGAG	3 cut(s)	671, 940, 1508
BpuMI	CCSGG	5 cut(s)	257, 258, 494, 512, 571
BsaAI	YACGTR	2 cut(s)	91, 1778
BsaI	GGTCTC	2 cut(s)	233, 2254
BsaWI	WCCGGW	4 cut(s)	45, 54, 799, 2508
BsaXI	ACNNNNNCTCC	6 cut(s)	186, 216, 870, 900, 1164, 1194
Bse118I	RCCGGY	2 cut(s)	45, 2508
Bse1I	ACTGG	4 cut(s)	1439, 1776, 1849, 2091
Bse3DI	GCAATG	1 cut(s)	2151
BseAI	TCCGGA	1 cut(s)	799
BseBI	CCWGG	3 cut(s)	283, 317, 2420
BseGI	GGATG	7 cut(s)	147, 342, 853, 1106, 1282, 2236, 2434
BseMI	GCAATG	1 cut(s)	2151
BseMII	CTCAG	3 cut(s)	569, 915, 2166
BseNI	ACTGG	4 cut(s)	1439, 1776, 1849, 2091
BseRI	GAGGAG	5 cut(s)	26, 221, 347, 891, 1600
BseX3I	CGGCCG	1 cut(s)	262
BsgI	GTGCAG	1 cut(s)	1530
Bsh1236I	CGCG	1 cut(s)	23
Bsh1285I	CGRYCG	1 cut(s)	265
BshNI	GGYRCC	2 cut(s)	323, 979
BshTI	ACCGGT	2 cut(s)	45, 2508
BsiEI	CGRYCG	1 cut(s)	265
BsiHKAI	GWGCWC	3 cut(s)	99, 357, 1771
BsiHKCI	CYCGRG	4 cut(s)	220, 256, 359, 2355
BslFI	GGGAC	1 cut(s)	2519
BsmAI	GTCTC	6 cut(s)	16, 147, 233, 594, 1723, 2254
BsmBI	CGTCTC	2 cut(s)	147, 594
BsmFI	GGGAC	1 cut(s)	2519
BsmI	GAATGC	2 cut(s)	1302, 2046
Bso31I	GGTCTC	2 cut(s)	233, 2254
BsoBI	CYCGRG	4 cut(s)	220, 256, 359, 2355
Bsp119I	TTCGAA	3 cut(s)	749, 1445, 2110
Bsp1286I	GDGCHC	3 cut(s)	99, 357, 1771
Bsp13I	TCCGGA	1 cut(s)	799
Bsp19I	CCATGG	1 cut(s)	375
BspCNI	CTCAG	3 cut(s)	568, 916, 2167
BspEI	TCCGGA	1 cut(s)	799
BspFNI	CGCG	1 cut(s)	23
BspHI	TCATGA	1 cut(s)	741
BspLI	GGNNCC	7 cut(s)	136, 325, 525, 870, 981, 1623, 2507
BspMI	ACCTGC	1 cut(s)	1033
BspPI	GGATC	5 cut(s)	875, 1059, 1239, 1930, 2345
BspQI	GCTCTTC	2 cut(s)	798, 2013
BspT104I	TTCGAA	3 cut(s)	749, 1445, 2110
BspT107I	GGYRCC	2 cut(s)	323, 979
BspTNI	GGTCTC	2 cut(s)	233, 2254
BsrDI	GCAATG	1 cut(s)	2151
BsrFI	RCCGGY	2 cut(s)	45, 2508
BsrI	ACTGG	4 cut(s)	1439, 1776, 1849, 2091
BssAI	RCCGGY	2 cut(s)	45, 2508
BssT1I	CCWWGG	5 cut(s)	375, 1074, 1402, 2235, 2394
Bst2UI	CCWGG	3 cut(s)	283, 317, 2420
Bst4CI	ACNGT	5 cut(s)	328, 702, 807, 832, 1803
Bst6I	CTCTTC	4 cut(s)	798, 1488, 2013, 2174
BstAPI	GCANNNNNTGC	2 cut(s)	1541, 1544
BstBAI	YACGTR	2 cut(s)	91, 1778
BstBI	TTCGAA	3 cut(s)	749, 1445, 2110
BstDSI	CCRYGG	2 cut(s)	21, 375
BstENI	CCTNNNNNAGG	1 cut(s)	314
BstF5I	GGATG	7 cut(s)	147, 342, 853, 1106, 1282, 2236, 2434
BstFNI	CGCG	1 cut(s)	23
BstHHI	GCGC	3 cut(s)	122, 193, 891
BstMAI	GTCTC	6 cut(s)	16, 147, 233, 594, 1723, 2254
BstMCI	CGRYCG	1 cut(s)	265
BstNI	CCWGG	3 cut(s)	283, 317, 2420
BstNSI	RCATGY	6 cut(s)	1134, 1443, 1553, 2027, 2118, 2298
BstSCI	CCNGG	8 cut(s)	255, 256, 281, 315, 492, 510, 569, 2418
BstUI	CGCG	1 cut(s)	23
BstV2I	GAAGAC	1 cut(s)	409
BstX2I	RGATCY	4 cut(s)	880, 1491, 1922, 2350
BstYI	RGATCY	4 cut(s)	880, 1491, 1922, 2350
BstZI	CGGCCG	1 cut(s)	262
BtgI	CCRYGG	2 cut(s)	21, 375
BtgZI	GCGATG	1 cut(s)	124
BtsCI	GGATG	7 cut(s)	147, 342, 853, 1106, 1282, 2236, 2434
BtsIMutI	CAGTG	6 cut(s)	707, 837, 990, 1432, 1769, 2104
BveI	ACCTGC	1 cut(s)	1033
CaiI	CAGNNNCTG	1 cut(s)	1544
CciI	TCATGA	1 cut(s)	741
CfoI	GCGC	3 cut(s)	122, 193, 891
Cfr10I	RCCGGY	2 cut(s)	45, 2508
Cfr42I	CCGCGG	1 cut(s)	24
Cfr9I	CCCGGG	1 cut(s)	256
CseI	GACGC	4 cut(s)	403, 598, 611, 1186
Csp6I	GTAC	4 cut(s)	49, 559, 1017, 1399
CspAI	ACCGGT	2 cut(s)	45, 2508
CspCI	CAANNNNNGTGG	2 cut(s)	1468, 1503
CviQI	GTAC	4 cut(s)	49, 559, 1017, 1399
DraI	TTTAAA	1 cut(s)	1269
DrdI	GACNNNNNNGTC	1 cut(s)	608
DseDI	GACNNNNNNGTC	1 cut(s)	608
EaeI	YGGCCR	7 cut(s)	3, 262, 504, 1147, 1201, 1564, 2391
EagI	CGGCCG	1 cut(s)	262
Eam1104I	CTCTTC	4 cut(s)	798, 1488, 2013, 2174
EarI	CTCTTC	4 cut(s)	798, 1488, 2013, 2174
EciI	GGCGGA	1 cut(s)	195
Ecl136II	GAGCTC	2 cut(s)	97, 355
EclXI	CGGCCG	1 cut(s)	262
Eco130I	CCWWGG	5 cut(s)	375, 1074, 1402, 2235, 2394
Eco24I	GRGCYC	2 cut(s)	99, 357
Eco31I	GGTCTC	2 cut(s)	233, 2254
Eco47I	GGWCC	6 cut(s)	285, 523, 665, 869, 1937, 2506
Eco52I	CGGCCG	1 cut(s)	262
Eco53kI	GAGCTC	2 cut(s)	97, 355
Eco57I	CTGAAG	2 cut(s)	196, 2037
Eco72I	CACGTG	2 cut(s)	91, 1778
Eco88I	CYCGRG	4 cut(s)	220, 256, 359, 2355
EcoICRI	GAGCTC	2 cut(s)	97, 355
EcoNI	CCTNNNNNAGG	1 cut(s)	314
EcoO109I	RGGNCCY	2 cut(s)	523, 869
EcoRI	GAATTC	2 cut(s)	1817, 2162
EcoRII	CCWGG	3 cut(s)	281, 315, 2418
EcoT14I	CCWWGG	5 cut(s)	375, 1074, 1402, 2235, 2394
EcoT22I	ATGCAT	1 cut(s)	2300
EcoT38I	GRGCYC	2 cut(s)	99, 357
ErhI	CCWWGG	5 cut(s)	375, 1074, 1402, 2235, 2394
Esp3I	CGTCTC	2 cut(s)	147, 594
FaqI	GGGAC	1 cut(s)	2519
FauI	CCCGC	1 cut(s)	534
FbaI	TGATCA	1 cut(s)	1356
FblI	GTMKAC	1 cut(s)	2446
FokI	GGATG	7 cut(s)	134, 329, 860, 1093, 1269, 2243, 2441
FriOI	GRGCYC	2 cut(s)	99, 357
FspBI	CTAG	3 cut(s)	644, 873, 1764
GlaI	GCGC	3 cut(s)	121, 192, 890
HgaI	GACGC	4 cut(s)	403, 598, 611, 1186
HhaI	GCGC	3 cut(s)	122, 193, 891
Hin6I	GCGC	3 cut(s)	120, 191, 889
HinP1I	GCGC	3 cut(s)	120, 191, 889
HincII	GTYRAC	3 cut(s)	1172, 2064, 2447
HindII	GTYRAC	3 cut(s)	1172, 2064, 2447
HphI	GGTGA	6 cut(s)	436, 556, 1014, 1435, 1694, 2444
Hpy166II	GTNNAC	8 cut(s)	409, 561, 665, 717, 1172, 1940, 2064, 2447
Hpy8I	GTNNAC	8 cut(s)	409, 561, 665, 717, 1172, 1940, 2064, 2447
Hpy99I	CGWCG	3 cut(s)	293, 407, 935
HpyAV	CCTTC	7 cut(s)	136, 1660, 1819, 1940, 1954, 1981, 2002
HpyCH4III	ACNGT	5 cut(s)	328, 702, 807, 832, 1803
HpyCH4IV	ACGT	6 cut(s)	90, 402, 1019, 1168, 1290, 1777
HpySE526I	ACGT	6 cut(s)	90, 402, 1019, 1168, 1290, 1777
HspAI	GCGC	3 cut(s)	120, 191, 889
Kpn2I	TCCGGA	1 cut(s)	799
Ksp22I	TGATCA	1 cut(s)	1356
KspI	CCGCGG	1 cut(s)	24
LguI	GCTCTTC	2 cut(s)	798, 2013
LmnI	GCTCC	8 cut(s)	39, 94, 127, 207, 360, 1185, 1613, 1891
LweI	GCATC	9 cut(s)	378, 450, 1033, 1129, 1291, 1465, 2221, 2307, 2398
MaeI	CTAG	3 cut(s)	644, 873, 1764
MaeII	ACGT	6 cut(s)	90, 402, 1019, 1168, 1290, 1777
MaeIII	GTNAC	2 cut(s)	1020, 2273
MfeI	CAATTG	2 cut(s)	1671, 2268
MflI	RGATCY	4 cut(s)	880, 1491, 1922, 2350
MhlI	GDGCHC	3 cut(s)	99, 357, 1771
MlsI	TGGCCA	4 cut(s)	5, 1149, 1203, 2393
MluNI	TGGCCA	4 cut(s)	5, 1149, 1203, 2393
MlyI	GAGTC	2 cut(s)	794, 2378
MmeI	TCCRAC	2 cut(s)	196, 1273
Mox20I	TGGCCA	4 cut(s)	5, 1149, 1203, 2393
Mph1103I	ATGCAT	1 cut(s)	2300
MroI	TCCGGA	1 cut(s)	799
MscI	TGGCCA	4 cut(s)	5, 1149, 1203, 2393
MseI	TTAA	4 cut(s)	269, 498, 1268, 1661
MslI	CAYNNNNRTG	1 cut(s)	374
Msp20I	TGGCCA	4 cut(s)	5, 1149, 1203, 2393
MspA1I	CMGCKG	2 cut(s)	23, 460
MspR9I	CCNGG	8 cut(s)	257, 258, 283, 317, 494, 512, 571, 2420
MunI	CAATTG	2 cut(s)	1671, 2268
Mva1269I	GAATGC	2 cut(s)	1302, 2046
MvaI	CCWGG	3 cut(s)	283, 317, 2420
MvnI	CGCG	1 cut(s)	23
NciI	CCSGG	5 cut(s)	257, 258, 494, 512, 571
NcoI	CCATGG	1 cut(s)	375
NlaIV	GGNNCC	7 cut(s)	136, 325, 525, 870, 981, 1623, 2507
NmeAIII	GCCGAG	3 cut(s)	156, 213, 390
NmuCI	GTSAC	1 cut(s)	1020
NsiI	ATGCAT	1 cut(s)	2300
NspI	RCATGY	6 cut(s)	1134, 1443, 1553, 2027, 2118, 2298
NspV	TTCGAA	3 cut(s)	749, 1445, 2110
PaeI	GCATGC	2 cut(s)	2027, 2298
PaeR7I	CTCGAG	2 cut(s)	359, 2355
PagI	TCATGA	1 cut(s)	741
PaqCI	CACCTGC	1 cut(s)	1033
PciI	ACATGT	1 cut(s)	2114
PciSI	GCTCTTC	2 cut(s)	798, 2013
PcsI	WCGNNNNNNNCGW	3 cut(s)	202, 399, 411
PctI	GAATGC	2 cut(s)	1302, 2046
PfeI	GAWTC	8 cut(s)	158, 185, 207, 454, 986, 995, 1883, 2087
PflFI	GACNNNGTC	1 cut(s)	413
PflMI	CCANNNNNTGG	2 cut(s)	1420, 2270
PfoI	TCCNGGA	2 cut(s)	315, 569
PinAI	ACCGGT	2 cut(s)	45, 2508
PleI	GAGTC	2 cut(s)	793, 2377
PmaCI	CACGTG	2 cut(s)	91, 1778
PmlI	CACGTG	2 cut(s)	91, 1778
PpsI	GAGTC	2 cut(s)	793, 2377
Ppu21I	YACGTR	2 cut(s)	91, 1778
PpuMI	RGGWCCY	2 cut(s)	523, 869
PscI	ACATGT	1 cut(s)	2114
PshBI	ATTAAT	1 cut(s)	269
PsiI	TTATAA	1 cut(s)	1790
Psp124BI	GAGCTC	2 cut(s)	99, 357
Psp5II	RGGWCCY	2 cut(s)	523, 869
Psp6I	CCWGG	3 cut(s)	281, 315, 2418
PspCI	CACGTG	2 cut(s)	91, 1778
PspGI	CCWGG	3 cut(s)	281, 315, 2418
PspN4I	GGNNCC	7 cut(s)	136, 325, 525, 870, 981, 1623, 2507
PspPPI	RGGWCCY	2 cut(s)	523, 869
PspXI	VCTCGAGB	1 cut(s)	359
PstNI	CAGNNNCTG	1 cut(s)	1544
PsuI	RGATCY	4 cut(s)	880, 1491, 1922, 2350
PsyI	GACNNNGTC	1 cut(s)	413
PvuII	CAGCTG	1 cut(s)	460
RsaI	GTAC	4 cut(s)	50, 560, 1018, 1400
RsaNI	GTAC	4 cut(s)	49, 559, 1017, 1399
RseI	CAYNNNNRTG	1 cut(s)	374
SacI	GAGCTC	2 cut(s)	99, 357
SacII	CCGCGG	1 cut(s)	24
SalI	GTCGAC	1 cut(s)	2445
SapI	GCTCTTC	2 cut(s)	798, 2013
SaqAI	TTAA	4 cut(s)	269, 498, 1268, 1661
SchI	GAGTC	2 cut(s)	794, 2378
ScrFI	CCNGG	8 cut(s)	257, 258, 283, 317, 494, 512, 571, 2420
SduI	GDGCHC	3 cut(s)	99, 357, 1771
SfaNI	GCATC	9 cut(s)	378, 450, 1033, 1129, 1291, 1465, 2221, 2307, 2398
Sfr274I	CTCGAG	2 cut(s)	359, 2355
Sfr303I	CCGCGG	1 cut(s)	24
SfuI	TTCGAA	3 cut(s)	749, 1445, 2110
SgrBI	CCGCGG	1 cut(s)	24
SinI	GGWCC	6 cut(s)	285, 523, 665, 869, 1937, 2506
SlaI	CTCGAG	2 cut(s)	359, 2355
SmaI	CCCGGG	1 cut(s)	258
SmiMI	CAYNNNNRTG	1 cut(s)	374
SmlI	CTYRAG	5 cut(s)	359, 650, 955, 1487, 2355
SmoI	CTYRAG	5 cut(s)	359, 650, 955, 1487, 2355
SphI	GCATGC	2 cut(s)	2027, 2298
SspMI	CTAG	3 cut(s)	644, 873, 1764
SstI	GAGCTC	2 cut(s)	99, 357
StyD4I	CCNGG	8 cut(s)	255, 256, 281, 315, 492, 510, 569, 2418
StyI	CCWWGG	5 cut(s)	375, 1074, 1402, 2235, 2394
TaaI	ACNGT	5 cut(s)	328, 702, 807, 832, 1803
TaiI	ACGT	6 cut(s)	93, 405, 1022, 1171, 1293, 1780
TaqII	GACCGA	1 cut(s)	302
TatI	WGTACW	1 cut(s)	558
TauI	GCSGC	8 cut(s)	23, 135, 264, 532, 1031, 1282, 1569, 2480
TfiI	GAWTC	8 cut(s)	158, 185, 207, 454, 986, 995, 1883, 2087
Tru1I	TTAA	4 cut(s)	269, 498, 1268, 1661
Tru9I	TTAA	4 cut(s)	269, 498, 1268, 1661
TscAI	CASTG	6 cut(s)	707, 837, 997, 1439, 1776, 2104
TseFI	GTSAC	1 cut(s)	1020
Tsp45I	GTSAC	1 cut(s)	1020
TspGWI	ACGGA	2 cut(s)	948, 1189
TspMI	CCCGGG	1 cut(s)	256
TspRI	CASTG	6 cut(s)	707, 837, 997, 1439, 1776, 2104
Tth111I	GACNNNGTC	1 cut(s)	413
Van91I	CCANNNNNTGG	2 cut(s)	1420, 2270
VpaK11BI	GGWCC	6 cut(s)	285, 523, 665, 869, 1937, 2506
VspI	ATTAAT	1 cut(s)	269
XagI	CCTNNNNNAGG	1 cut(s)	314
XapI	RAATTY	5 cut(s)	751, 1087, 1154, 1817, 2162
XceI	RCATGY	6 cut(s)	1134, 1443, 1553, 2027, 2118, 2298
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2426
XhoI	CTCGAG	2 cut(s)	359, 2355
XmaI	CCCGGG	1 cut(s)	256
XmiI	GTMKAC	1 cut(s)	2446
XspI	CTAG	3 cut(s)	644, 873, 1764
Zsp2I	ATGCAT	1 cut(s)	2300

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.