FvH4_6g39510

Cytochrome p450

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
Physical Location & Seq
Forward (+)
31191710 .. 31197445
5736 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g39510.t6

Sequence Viewer

Length: 1719 bp
ATGGCTGCTTATTCTCCCCCAACTCTGCTTAATCTCAGCTTTCAGAGAAGTGACTATGGTTATCTTCACTCTTCAACCACCACTAATCTTCTCAATCCAAAGCTCAAACGCTCTTCTATCAGGTGCCAATCCACTAGTACTGAAGACCCAAAAACAAAAAGAAATTTACTGGATAATGCAAGCAACCTCCTGACAAATCTTTTAAGTGGGGGAAATCTTGGGTCTATGCCCATAGCTGAAGGTGCAGTCACTGACTTGTTTGATCGGCCTCTCTTCTTTTCACTATATGATTGGTTCATAGAGCACGGCTCTGTGTATAAGCTTGCATTTGGACCGAAAGCATTTGTTGTTGTATCAGATCCTATTGTTGCAAGGCACATTCTTCGAGAAAATGCATTTGGTTATGATAAGGGAGTTCTGGCTGATATTCTGGAACCGATAATGGGAAAAGGACTTATACCCGCTGACCTTGAAACTTGGAAGCAGAGGAGAAGAGTTATTGCTCCTGGGTTCCATGCTGTATACCTGGAAGCTATGGTCAAAATGTTCTGTGATTGTTCAGAAAGAACAGTATCAAAAGTTGAGAAGTTGCTGGAAAGAGAGGAAGTGAATGGGGGAAAGACAATTGAAGTAGACCTTGAAGCAGAGTTTTTGAGTCTGGGGCTTGATATTATTGGGCTTGGTGTCTTTAACTATGACTTTGGTTCTGTTACCAAGGAATCTCCTGTAATTAAGGCAGTATATGGTACTCTCTCTGAAGCTGAACATAGGTCCACCTTTTACATCCCATATTGGAAATTTCCCCTGGCAAGGTGGATAGTTCCCCGGCAGCGGAAGTTTTATGGTGATCTGAAGGTTATAAATGACTGTCTCGATGAACTCATCAGAAATGCAAAAGAGACCAGACAGGAAACAGATGTCGAAAAACTGCAACAAAGGGACTATGCTAATCTGAAGGATGCAAGTCTATTGCGTTTCTTAGTTGATATGCGCGGATCTGATGTTGACGACCGTCAGCTGAGAGATGACTTGATGACAATGCTTATTGCCGGGCATGAAACAACAGCAGCTGTCCTTACTTGGGCTATTTTCTTCCTTGCACAAAACCCCTCCAAGATGAAGAAAGCACAGACAGAAATTGATTCGGTACTTGGACAAAGTCAACCAACTTTAGATTCACTTAAAAAATTGGAGTACACAAAATTTATTATTGCGGAGTCTCTTCGTTTGTATCCTCAACCCCCCTTGCTTATTAGACGTTCTCTAAAACCAGATACACTACCAGGAGGATACAAGGGTGAAAAGGGTGGTTATAAGATTCCCGCCGGAACTGATATCTTTATCTCTGTATACAATCTCCACAGATCTCCATATTATTGGGACCGTCCTAATGTATTCGAACCAGAGAGGTTTTCAGTGCAAAAGAATAGTGAGATCGAAGGATGGGCTGGCTTTGACCCTTCTCGAAGCCCTGGAGCATATTATCCGAATGAGATTATGGCAGATTTCTCCTTCTTACCTTTCGGTGGAGGGCCAAGAAAATGCGTGGGGGACCAATTCGCCCTGTTGGAGTCGACAGTATCATTGGCAATGCTGTTGCAGAAGTTCAATGTAGAGCTAAGAGGATCACCGGAGTCGGTTGGACTAGTAACAGGGGCAACCATCCACACCAAGAATGGAATGTGGTGCAAATTAAGTAAGAGGTCTGATGTACAGTGA

Protein Analysis

573

Amino Acids

64.45

Weight (kDa)

7.09

Isoelectric Point (pI)

45.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 98 - 431 6e-50 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 860, 1314
AccB1I GGYRCC 1 cut(s) 123
AccI GTMKAC 4 cut(s) 522, 633, 1350, 1574
AccII CGCG 1 cut(s) 993
AciI CCGC 5 cut(s) 462, 832, 993, 1214, 1323
AclWI GGATC 3 cut(s) 353, 1003, 1633
AcsI RAATTY 3 cut(s) 163, 797, 1202
AcuI CTGAAG 5 cut(s) 162, 258, 777, 872, 974
AfaI GTAC 5 cut(s) 139, 748, 1149, 1196, 1713
AfiI CCNNNNNNNGG 5 cut(s) 443, 810, 831, 1081, 1526
AgsI TTSAA 5 cut(s) 75, 473, 629, 641, 1609
AhlI ACTAGT 2 cut(s) 134, 1645
AjnI CCWGG 5 cut(s) 505, 525, 804, 1282, 1471
AjuI GAANNNNNNNTTGG 4 cut(s) 381, 413, 1159, 1191
AluBI AGCT 9 cut(s) 39, 103, 236, 322, 533, 761, 1018, 1070, 1618
AluI AGCT 9 cut(s) 39, 103, 236, 322, 533, 761, 1018, 1070, 1618
Alw21I GWGCWC 1 cut(s) 306
Alw26I GTCTC 3 cut(s) 875, 893, 1224
AlwI GGATC 3 cut(s) 353, 1003, 1633
AlwNI CAGNNNCTG 2 cut(s) 251, 1070
AoxI GGCC 2 cut(s) 266, 1532
ApeKI GCWGC 3 cut(s) 5, 829, 1067
ApoI RAATTY 3 cut(s) 163, 797, 1202
AspLEI GCGC 1 cut(s) 993
AspS9I GGNCC 5 cut(s) 332, 771, 1381, 1532, 1552
AsuC2I CCSGG 2 cut(s) 826, 1051
AsuHPI GGTGA 3 cut(s) 857, 1310, 1620
AsuII TTCGAA 1 cut(s) 1398
AvaII GGWCC 4 cut(s) 332, 771, 1381, 1552
BaeI ACNNNNGTAYC 2 cut(s) 1282, 1315
BanI GGYRCC 1 cut(s) 123
BbsI GAAGAC 1 cut(s) 150
Bbv12I GWGCWC 1 cut(s) 306
BbvI GCAGC 2 cut(s) 841, 1079
BccI CCATC 2 cut(s) 1437, 1670
BceAI ACGGC 1 cut(s) 322
BcgI CGANNNNNNTGC 2 cut(s) 365, 399
BciT130I CCWGG 5 cut(s) 507, 527, 806, 1284, 1473
BciVI GTATCC 2 cut(s) 1242, 1283
BcnI CCSGG 2 cut(s) 826, 1051
BcoDI GTCTC 3 cut(s) 875, 893, 1224
BcuI ACTAGT 2 cut(s) 134, 1645
BfaI CTAG 2 cut(s) 135, 1646
BfuI GTATCC 2 cut(s) 1242, 1283
BglII AGATCT 1 cut(s) 1364
BisI GCNGC 3 cut(s) 6, 830, 1068
BlsI GCNGC 3 cut(s) 7, 831, 1069
BmcAI AGTACT 1 cut(s) 139
Bme1390I CCNGG 7 cut(s) 507, 527, 806, 826, 1051, 1284, 1473
Bme18I GGWCC 4 cut(s) 332, 771, 1381, 1552
BmgT120I GGNCC 5 cut(s) 332, 771, 1381, 1532, 1552
BmiI GGNNCC 5 cut(s) 125, 435, 512, 1382, 1553
BmrFI CCNGG 7 cut(s) 507, 527, 806, 826, 1051, 1284, 1473
BmsI GCATC 1 cut(s) 949
BoxI GACNNNNGTC 1 cut(s) 1011
BpiI GAAGAC 1 cut(s) 150
BplI GAGNNNNNCTC 2 cut(s) 293, 325
BpmI CTGGAG 1 cut(s) 1494
Bpu14I TTCGAA 1 cut(s) 1398
BpuMI CCSGG 2 cut(s) 826, 1051
BsaI GGTCTC 1 cut(s) 893
BsaJI CCNNGG 5 cut(s) 506, 714, 804, 824, 1471
BsaWI WCCGGW 1 cut(s) 1630
Bsc4I CCNNNNNNNGG 5 cut(s) 443, 810, 831, 1081, 1526
Bse1I ACTGG 1 cut(s) 174
Bse3DI GCAATG 1 cut(s) 1596
BseBI CCWGG 5 cut(s) 507, 527, 806, 1284, 1473
BseDI CCNNGG 5 cut(s) 506, 714, 804, 824, 1471
BseGI GGATG 4 cut(s) 783, 964, 1448, 1662
BseLI CCNNNNNNNGG 5 cut(s) 443, 810, 831, 1081, 1526
BseMI GCAATG 1 cut(s) 1596
BseMII CTCAG 2 cut(s) 49, 1010
BseNI ACTGG 1 cut(s) 174
BseRI GAGGAG 1 cut(s) 502
BseXI GCAGC 2 cut(s) 841, 1079
BsgI GTGCAG 1 cut(s) 264
Bsh1236I CGCG 1 cut(s) 993
Bsh1285I CGRYCG 1 cut(s) 1012
BshFI GGCC 2 cut(s) 268, 1534
BshNI GGYRCC 1 cut(s) 123
BsiEI CGRYCG 1 cut(s) 1012
BsiHKAI GWGCWC 1 cut(s) 306
BsiSI CCGG 4 cut(s) 826, 1050, 1326, 1631
BslFI GGGAC 3 cut(s) 953, 1394, 1565
BslI CCNNNNNNNGG 5 cut(s) 443, 810, 831, 1081, 1526
BsmAI GTCTC 3 cut(s) 875, 893, 1224
BsmFI GGGAC 3 cut(s) 953, 1394, 1565
BsnI GGCC 2 cut(s) 268, 1534
Bso31I GGTCTC 1 cut(s) 893
Bsp119I TTCGAA 1 cut(s) 1398
Bsp1286I GDGCHC 1 cut(s) 306
Bsp1407I TGTACA 1 cut(s) 1711
Bsp143I GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
BspACI CCGC 5 cut(s) 462, 832, 993, 1214, 1323
BspANI GGCC 2 cut(s) 268, 1534
BspCNI CTCAG 2 cut(s) 48, 1011
BspFNI CGCG 1 cut(s) 993
BspLI GGNNCC 5 cut(s) 125, 435, 512, 1382, 1553
BspPI GGATC 3 cut(s) 353, 1003, 1633
BspQI GCTCTTC 1 cut(s) 118
BspT104I TTCGAA 1 cut(s) 1398
BspT107I GGYRCC 1 cut(s) 123
BspTNI GGTCTC 1 cut(s) 893
BsrDI GCAATG 1 cut(s) 1596
BsrGI TGTACA 1 cut(s) 1711
BsrI ACTGG 1 cut(s) 174
BssECI CCNNGG 5 cut(s) 506, 714, 804, 824, 1471
BssMI GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
BssNAI GTATAC 2 cut(s) 523, 1351
BssT1I CCWWGG 1 cut(s) 714
Bst1107I GTATAC 2 cut(s) 523, 1351
Bst2UI CCWGG 5 cut(s) 507, 527, 806, 1284, 1473
Bst4CI ACNGT 6 cut(s) 571, 869, 1013, 1385, 1579, 1716
Bst6I CTCTTC 5 cut(s) 76, 118, 278, 487, 1227
BstAUI TGTACA 1 cut(s) 1711
BstBI TTCGAA 1 cut(s) 1398
BstC8I GCNNGC 3 cut(s) 181, 324, 1450
BstDEI CTNAG 4 cut(s) 35, 979, 1019, 1619
BstF5I GGATG 4 cut(s) 783, 964, 1448, 1662
BstFNI CGCG 1 cut(s) 993
BstHHI GCGC 1 cut(s) 993
BstKTI GATC 7 cut(s) 265, 361, 850, 998, 1367, 1437, 1628
BstMAI GTCTC 3 cut(s) 875, 893, 1224
BstMBI GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
BstMCI CGRYCG 1 cut(s) 1012
BstMWI GCNNNNNNNGC 1 cut(s) 242
BstNI CCWGG 5 cut(s) 507, 527, 806, 1284, 1473
BstPAI GACNNNNGTC 1 cut(s) 1011
BstSCI CCNGG 7 cut(s) 505, 525, 804, 824, 1049, 1282, 1471
BstUI CGCG 1 cut(s) 993
BstV1I GCAGC 2 cut(s) 841, 1079
BstV2I GAAGAC 1 cut(s) 150
BstX2I RGATCY 3 cut(s) 358, 995, 1364
BstXI CCANNNNNNTGG 1 cut(s) 1377
BstYI RGATCY 3 cut(s) 358, 995, 1364
BstZ17I GTATAC 2 cut(s) 523, 1351
BsuI GTATCC 2 cut(s) 1242, 1283
BsuRI GGCC 2 cut(s) 268, 1534
BtsCI GGATG 4 cut(s) 783, 964, 1448, 1662
BtsIMutI CAGTG 2 cut(s) 249, 1422
Cac8I GCNNGC 3 cut(s) 181, 324, 1450
CaiI CAGNNNCTG 2 cut(s) 251, 1070
CfoI GCGC 1 cut(s) 993
Cfr13I GGNCC 5 cut(s) 332, 771, 1381, 1532, 1552
Csp6I GTAC 5 cut(s) 138, 747, 1148, 1195, 1712
CviAII CATG 2 cut(s) 515, 1055
CviQI GTAC 5 cut(s) 138, 747, 1148, 1195, 1712
DdeI CTNAG 4 cut(s) 35, 979, 1019, 1619
DpnI GATC 7 cut(s) 264, 360, 849, 997, 1366, 1436, 1627
DpnII GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
Eam1104I CTCTTC 5 cut(s) 76, 118, 278, 487, 1227
EarI CTCTTC 5 cut(s) 76, 118, 278, 487, 1227
Eco130I CCWWGG 1 cut(s) 714
Eco31I GGTCTC 1 cut(s) 893
Eco32I GATATC 1 cut(s) 1336
Eco47I GGWCC 4 cut(s) 332, 771, 1381, 1552
Eco57I CTGAAG 5 cut(s) 162, 258, 777, 872, 974
EcoRII CCWGG 5 cut(s) 505, 525, 804, 1282, 1471
EcoRV GATATC 1 cut(s) 1336
EcoT14I CCWWGG 1 cut(s) 714
EcoT22I ATGCAT 1 cut(s) 397
ErhI CCWWGG 1 cut(s) 714
FaeI CATG 2 cut(s) 518, 1058
FalI AAGNNNNNCTT 2 cut(s) 621, 653
FaqI GGGAC 3 cut(s) 953, 1394, 1565
FatI CATG 2 cut(s) 514, 1054
FauI CCCGC 2 cut(s) 469, 1330
FblI GTMKAC 4 cut(s) 522, 633, 1350, 1574
Fnu4HI GCNGC 3 cut(s) 6, 830, 1068
FokI GGATG 4 cut(s) 770, 971, 1455, 1649
Fsp4HI GCNGC 3 cut(s) 6, 830, 1068
FspBI CTAG 2 cut(s) 135, 1646
GlaI GCGC 1 cut(s) 992
GluI GCNGC 3 cut(s) 6, 830, 1068
GsuI CTGGAG 1 cut(s) 1494
HaeIII GGCC 2 cut(s) 268, 1534
HapII CCGG 4 cut(s) 826, 1050, 1326, 1631
HhaI GCGC 1 cut(s) 993
Hin1II CATG 2 cut(s) 518, 1058
Hin6I GCGC 1 cut(s) 991
HinP1I GCGC 1 cut(s) 991
HincII GTYRAC 3 cut(s) 1006, 1163, 1575
HindII GTYRAC 3 cut(s) 1006, 1163, 1575
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 8 cut(s) 655, 719, 1142, 1175, 1217, 1318, 1571, 1634
HpaII CCGG 4 cut(s) 826, 1050, 1326, 1631
HphI GGTGA 3 cut(s) 857, 1310, 1620
Hpy166II GTNNAC 8 cut(s) 523, 634, 774, 1006, 1163, 1197, 1351, 1575
Hpy188III TCNNGA 5 cut(s) 190, 386, 431, 872, 1464
Hpy8I GTNNAC 8 cut(s) 523, 634, 774, 1006, 1163, 1197, 1351, 1575
HpyAV CCTTC 6 cut(s) 233, 847, 949, 1433, 1470, 1522
HpyCH4III ACNGT 6 cut(s) 571, 869, 1013, 1385, 1579, 1716
HpyCH4IV ACGT 1 cut(s) 1258
HpyF10VI GCNNNNNNNGC 1 cut(s) 242
HpyF3I CTNAG 4 cut(s) 35, 979, 1019, 1619
HpySE526I ACGT 1 cut(s) 1258
Hsp92II CATG 2 cut(s) 518, 1058
HspAI GCGC 1 cut(s) 991
Kzo9I GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
LguI GCTCTTC 1 cut(s) 118
LmnI GCTCC 2 cut(s) 508, 1475
Lsp1109I GCAGC 2 cut(s) 841, 1079
LweI GCATC 1 cut(s) 949
MaeI CTAG 2 cut(s) 135, 1646
MaeII ACGT 1 cut(s) 1258
MaeIII GTNAC 4 cut(s) 50, 247, 709, 1648
MalI GATC 7 cut(s) 264, 360, 849, 997, 1366, 1436, 1627
MboI GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
MfeI CAATTG 1 cut(s) 624
MflI RGATCY 3 cut(s) 358, 995, 1364
MhlI GDGCHC 1 cut(s) 306
MluCI AATT 9 cut(s) 163, 624, 729, 797, 1137, 1187, 1202, 1556, 1691
MlyI GAGTC 4 cut(s) 664, 1226, 1580, 1643
MmeI TCCRAC 2 cut(s) 1548, 1621
Mph1103I ATGCAT 1 cut(s) 397
MseI TTAA 6 cut(s) 30, 203, 690, 732, 1182, 1694
MspA1I CMGCKG 4 cut(s) 464, 832, 1018, 1070
MspI CCGG 4 cut(s) 826, 1050, 1326, 1631
MspR9I CCNGG 7 cut(s) 507, 527, 806, 826, 1051, 1284, 1473
MunI CAATTG 1 cut(s) 624
MvaI CCWGG 5 cut(s) 507, 527, 806, 1284, 1473
MvnI CGCG 1 cut(s) 993
MwoI GCNNNNNNNGC 1 cut(s) 242
NciI CCSGG 2 cut(s) 826, 1051
NdeII GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
NlaIII CATG 2 cut(s) 518, 1058
NlaIV GGNNCC 5 cut(s) 125, 435, 512, 1382, 1553
NmuCI GTSAC 2 cut(s) 50, 247
NsiI ATGCAT 1 cut(s) 397
NspV TTCGAA 1 cut(s) 1398
PciSI GCTCTTC 1 cut(s) 118
PfeI GAWTC 4 cut(s) 719, 1142, 1175, 1318
PflFI GACNNNGTC 1 cut(s) 1158
PkrI GCNGC 3 cut(s) 7, 831, 1069
PleI GAGTC 4 cut(s) 663, 1225, 1579, 1642
PpsI GAGTC 4 cut(s) 663, 1225, 1579, 1642
PshAI GACNNNNGTC 1 cut(s) 1011
PsiI TTATAA 2 cut(s) 860, 1314
Psp6I CCWGG 5 cut(s) 505, 525, 804, 1282, 1471
PspGI CCWGG 5 cut(s) 505, 525, 804, 1282, 1471
PspN4I GGNNCC 5 cut(s) 125, 435, 512, 1382, 1553
PspPI GGNCC 5 cut(s) 332, 771, 1381, 1532, 1552
PstNI CAGNNNCTG 2 cut(s) 251, 1070
PsuI RGATCY 3 cut(s) 358, 995, 1364
PsyI GACNNNGTC 1 cut(s) 1158
PvuII CAGCTG 2 cut(s) 1018, 1070
RsaI GTAC 5 cut(s) 139, 748, 1149, 1196, 1713
RsaNI GTAC 5 cut(s) 138, 747, 1148, 1195, 1712
SalI GTCGAC 1 cut(s) 1573
SapI GCTCTTC 1 cut(s) 118
SaqAI TTAA 6 cut(s) 30, 203, 690, 732, 1182, 1694
SatI GCNGC 3 cut(s) 6, 830, 1068
Sau3AI GATC 7 cut(s) 262, 358, 847, 995, 1364, 1434, 1625
Sau96I GGNCC 5 cut(s) 332, 771, 1381, 1532, 1552
ScaI AGTACT 1 cut(s) 139
SchI GAGTC 4 cut(s) 664, 1226, 1580, 1643
ScrFI CCNGG 7 cut(s) 507, 527, 806, 826, 1051, 1284, 1473
SduI GDGCHC 1 cut(s) 306
SfaNI GCATC 1 cut(s) 949
SfuI TTCGAA 1 cut(s) 1398
SinI GGWCC 4 cut(s) 332, 771, 1381, 1552
SpeI ACTAGT 2 cut(s) 134, 1645
Sse9I AATT 9 cut(s) 163, 624, 729, 797, 1137, 1187, 1202, 1556, 1691
SsiI CCGC 5 cut(s) 462, 832, 993, 1214, 1323
SspMI CTAG 2 cut(s) 135, 1646
StyD4I CCNGG 7 cut(s) 505, 525, 804, 824, 1049, 1282, 1471
StyI CCWWGG 1 cut(s) 714
TaaI ACNGT 6 cut(s) 571, 869, 1013, 1385, 1579, 1716
TaiI ACGT 1 cut(s) 1261
TaqI TCGA 7 cut(s) 385, 873, 921, 1398, 1437, 1465, 1574
TaqII GACCGA 1 cut(s) 349
TasI AATT 9 cut(s) 163, 624, 729, 797, 1137, 1187, 1202, 1556, 1691
TatI WGTACW 3 cut(s) 137, 1194, 1711
TfiI GAWTC 4 cut(s) 719, 1142, 1175, 1318
Tru1I TTAA 6 cut(s) 30, 203, 690, 732, 1182, 1694
Tru9I TTAA 6 cut(s) 30, 203, 690, 732, 1182, 1694
TscAI CASTG 2 cut(s) 256, 1422
TseFI GTSAC 2 cut(s) 50, 247
TseI GCWGC 3 cut(s) 5, 829, 1067
Tsp45I GTSAC 2 cut(s) 50, 247
TspDTI ATGAA 4 cut(s) 286, 891, 1071, 1133
TspRI CASTG 2 cut(s) 256, 1422
Tth111I GACNNNGTC 1 cut(s) 1158
VpaK11BI GGWCC 4 cut(s) 332, 771, 1381, 1552
XapI RAATTY 3 cut(s) 163, 797, 1202
XcmI CCANNNNNNNNNTGG 1 cut(s) 1673
XmiI GTMKAC 4 cut(s) 522, 633, 1350, 1574
XspI CTAG 2 cut(s) 135, 1646
ZrmI AGTACT 1 cut(s) 139
Zsp2I ATGCAT 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.