pycom17g12140

Cytochrome p450

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Reverse (-)
9894607 .. 9898608
4002 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g12140.13

Sequence Viewer

Length: 1734 bp
ATGGCTGGTTCTTCTCCGTTGCATCCTTCTCCTCCAACTCTCATTAATCTCAACTTCCGGAGAAGTGAATTGGGTTACTTTCATTCTTCAACTACCACCCATGTTCTCAATTCCAAGCTCAGGCACTGTCCTCTCAGGAGCCAATCGACCAGTACTGAGGAACCAAAAACAAAGAGAAATTTACTGGACAATGCAAGCAACCTCCTTACCAATTTTTTAAGTGGTGGGAAAATTGGGTCTATGCCCACAGCTGAAGGTGCAGTCACCGATTTGTTTGATCGGCCTCTCTTCTTTTCACTGTATGATTGGTTTATAGAGCATGGCTCTGTGTACAAGCTTGCATTTGGACCAAAAGCTTTTGTTGTTGTATCAGATCCAATTGTTGCGAGGCATATTCTTCGAGAAAATGCATTTAGTTATGACAAGGGAGTTCTCGCTGATATTCTAGAACCAATTATGGGGAAAGGACTTATACCCGCTGACCTTGACACTTGGAAGCAGAGGAGAAGAGTTATTGCTCCGGGATTCCATTCTTTATACTTGGAAGCTATGGTCAAGACATTCAGAAATTGTTCAGAAAGAACAATAGTAAAATTTGAGAAGCTACTTGAAAGAGAGAGCTTGCGTGGTGGCAAGGCAATAGAGTTGGATCTTGAAGCAGAGTTTTCGAGTTTGGCTCTTGATATTATCGGGCTTGGTGTCTTCAACTACGACTTTGGTTCTGTTACCAAAGAATCTCCTGTAATTAAGGCAGTGTATGGCACTCTTTTTGAAGCTGAACATCGGTCCACCTTTTATATCCCGTATTGGAAATTTCCACTGGCAAAGTGGATAGTCCCCAGGCAACGGAAGTTCTACGGTGATCTGAAGGTTATAAATGACTGTCTTGATGTACTCATCAGAAATGCGAAAGAGACCAGAGAGGAAACAGACGTTGAAAAACTGCAACAAAGGGATTACTTAAATCTGAAGGATGCAAGCCTATTGCGTTTCTTAGTTGATATGCGTGGAACAGATGTTGATGATCGTCAGTTGAGGGATGATTTGATGACAATGCTTATTGCTGGCCATGAAACGACAGCTGCTGTCCTTACGTGGGCTGTTTTCTTCCTTGCACAAAACCCGTCCAAGATGAAGAAAGCGCAAGAAGAGATTGATTCAGTGCTTGGACAGGACGGACCAACTTATGAATCAATCAAAAAATTGGAGTACACCAGACTTATTGCCGTAGAGTCTCTTCGTTTGTTTCCCCAACCCCCCTTGCTTATTAGACGTTCTCTCAAACCAGATAAACTACCAGGAGGATACAACGGTGCAAAAGATGGTTATGCGGTTCCTGCTGGGACTGATCTCTTCATTTCTGTATATAATCTCCATCGATCTCCATACTTTTGGGACAATCCTAATGAGTTTGAACCGGAGAGGTTTTTAGTCGAAAAGAAGAGTCACGTTGAAGGATGGGCCGGTTTTGACCCTTCTCGAAGCCCTGGAGCGTTGTACCCGAATGAGATTATAGCAGATTTCGCCTTCTTACCTTTCGGTGGAGGGCCAAGAAAATGTGTCGGAGACCAGTTTGCTCTAATGGAGTCAACTGTGGCACTGGCTATGCTGCTGCAGAAGTTCACCGTCGAGCTAAAAGGATCCCCAGATTCAGTGGAACAAGTTACAGGGGCAACACTCCACACAAAGAACGGATTGTGGTGCAAGTTACAGAAGAGGTCCGATATAAACTGA

Protein Analysis

578

Amino Acids

65.12

Weight (kDa)

7.2

Isoelectric Point (pI)

45.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 875
AccIII TCCGGA 1 cut(s) 57
AciI CCGC 2 cut(s) 477, 1331
AclWI GGATC 4 cut(s) 368, 657, 1635, 1648
AcoI YGGCCR 1 cut(s) 1066
AcsI RAATTY 3 cut(s) 178, 593, 812
AcuI CTGAAG 3 cut(s) 273, 887, 989
AfaI GTAC 5 cut(s) 154, 332, 894, 1211, 1499
AfiI CCNNNNNNNGG 5 cut(s) 120, 458, 846, 1096, 1541
AgsI TTSAA 8 cut(s) 90, 611, 656, 706, 773, 938, 1415, 1454
AjnI CCWGG 3 cut(s) 839, 1297, 1486
Alw26I GTCTC 3 cut(s) 908, 1239, 1560
AlwI GGATC 4 cut(s) 368, 657, 1635, 1648
AlwNI CAGNNNCTG 2 cut(s) 126, 1085
Aor13HI TCCGGA 1 cut(s) 57
AoxI GGCC 4 cut(s) 281, 1066, 1461, 1547
ApeKI GCWGC 3 cut(s) 1082, 1609, 1612
ApoI RAATTY 3 cut(s) 178, 593, 812
AseI ATTAAT 1 cut(s) 45
Asp700I GAANNNNTTC 1 cut(s) 571
AspLEI GCGC 1 cut(s) 1144
AspS9I GGNCC 6 cut(s) 347, 786, 1178, 1461, 1547, 1719
AsuC2I CCSGG 1 cut(s) 522
AsuHPI GGTGA 3 cut(s) 256, 872, 1615
AvaII GGWCC 4 cut(s) 347, 786, 1178, 1719
BaeI ACNNNNGTAYC 2 cut(s) 1297, 1330
BalI TGGCCA 1 cut(s) 1068
BamHI GGATCC 1 cut(s) 1640
BarI GAAGNNNNNNTAC 2 cut(s) 1221, 1253
BbsI GAAGAC 1 cut(s) 694
BbvI GCAGC 3 cut(s) 1069, 1596, 1599
BccI CCATC 3 cut(s) 1316, 1383, 1452
BceAI ACGGC 1 cut(s) 1211
BcgI CGANNNNNNTGC 4 cut(s) 380, 414, 648, 682
BciT130I CCWGG 3 cut(s) 841, 1299, 1488
BciVI GTATCC 1 cut(s) 1298
BcnI CCSGG 1 cut(s) 522
BcoDI GTCTC 3 cut(s) 908, 1239, 1560
BfaI CTAG 1 cut(s) 446
BfmI CTRYAG 1 cut(s) 1613
BfuI GTATCC 1 cut(s) 1298
BisI GCNGC 3 cut(s) 1083, 1610, 1613
BlsI GCNGC 3 cut(s) 1084, 1611, 1614
BmcAI AGTACT 1 cut(s) 154
Bme1390I CCNGG 4 cut(s) 522, 841, 1299, 1488
Bme18I GGWCC 4 cut(s) 347, 786, 1178, 1719
BmgT120I GGNCC 6 cut(s) 347, 786, 1178, 1461, 1547, 1719
BmiI GGNNCC 4 cut(s) 140, 162, 1335, 1642
BmrFI CCNGG 4 cut(s) 522, 841, 1299, 1488
BmsI GCATC 2 cut(s) 31, 964
BpiI GAAGAC 1 cut(s) 694
BplI GAGNNNNNCTC 4 cut(s) 308, 340, 661, 693
BpmI CTGGAG 1 cut(s) 1509
Bpu10I CCTNAGC 1 cut(s) 119
BpuMI CCSGG 1 cut(s) 522
Bsa29I ATCGAT 1 cut(s) 1378
BsaAI YACGTR 1 cut(s) 1095
BsaI GGTCTC 2 cut(s) 908, 1560
BsaJI CCNNGG 2 cut(s) 839, 1486
BsaWI WCCGGW 2 cut(s) 57, 1417
Bsc4I CCNNNNNNNGG 5 cut(s) 120, 458, 846, 1096, 1541
Bse118I RCCGGY 1 cut(s) 1463
Bse1I ACTGG 5 cut(s) 150, 189, 825, 1570, 1605
BseAI TCCGGA 1 cut(s) 57
BseBI CCWGG 3 cut(s) 841, 1299, 1488
BseCI ATCGAT 1 cut(s) 1378
BseDI CCNNGG 2 cut(s) 839, 1486
BseGI GGATG 4 cut(s) 22, 979, 1045, 1463
BseLI CCNNNNNNNGG 5 cut(s) 120, 458, 846, 1096, 1541
BseMII CTCAG 3 cut(s) 133, 147, 148
BseNI ACTGG 5 cut(s) 150, 189, 825, 1570, 1605
BseRI GAGGAG 2 cut(s) 21, 517
BseXI GCAGC 3 cut(s) 1069, 1596, 1599
BseYI CCCAGC 1 cut(s) 1340
BsgI GTGCAG 1 cut(s) 279
BshFI GGCC 4 cut(s) 283, 1068, 1463, 1549
BshVI ATCGAT 1 cut(s) 1378
BsiSI CCGG 4 cut(s) 58, 521, 1418, 1464
BslFI GGGAC 3 cut(s) 821, 1357, 1409
BslI CCNNNNNNNGG 5 cut(s) 120, 458, 846, 1096, 1541
BsmAI GTCTC 3 cut(s) 908, 1239, 1560
BsmFI GGGAC 3 cut(s) 821, 1357, 1409
BsnI GGCC 4 cut(s) 283, 1068, 1463, 1549
Bso31I GGTCTC 2 cut(s) 908, 1560
Bsp13I TCCGGA 1 cut(s) 57
Bsp1407I TGTACA 1 cut(s) 330
Bsp143I GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
BspACI CCGC 2 cut(s) 477, 1331
BspANI GGCC 4 cut(s) 283, 1068, 1463, 1549
BspCNI CTCAG 3 cut(s) 132, 147, 148
BspDI ATCGAT 1 cut(s) 1378
BspEI TCCGGA 1 cut(s) 57
BspLI GGNNCC 4 cut(s) 140, 162, 1335, 1642
BspMAI CTGCAG 1 cut(s) 1617
BspPI GGATC 4 cut(s) 368, 657, 1635, 1648
BspTNI GGTCTC 2 cut(s) 908, 1560
BsrFI RCCGGY 1 cut(s) 1463
BsrGI TGTACA 1 cut(s) 330
BsrI ACTGG 5 cut(s) 150, 189, 825, 1570, 1605
BssAI RCCGGY 1 cut(s) 1463
BssECI CCNNGG 2 cut(s) 839, 1486
BssMI GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
Bst2UI CCWGG 3 cut(s) 841, 1299, 1488
Bst4CI ACNGT 7 cut(s) 128, 300, 860, 884, 1313, 1594, 1627
Bst6I CTCTTC 7 cut(s) 293, 502, 1143, 1242, 1358, 1436, 1709
BstAUI TGTACA 1 cut(s) 330
BstBAI YACGTR 1 cut(s) 1095
BstC8I GCNNGC 5 cut(s) 196, 339, 623, 979, 1066
BstDEI CTNAG 4 cut(s) 119, 134, 156, 994
BstF5I GGATG 4 cut(s) 22, 979, 1045, 1463
BstHHI GCGC 1 cut(s) 1144
BstKTI GATC 8 cut(s) 280, 376, 652, 865, 1027, 1351, 1382, 1643
BstMAI GTCTC 3 cut(s) 908, 1239, 1560
BstMBI GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
BstMWI GCNNNNNNNGC 3 cut(s) 257, 1337, 1523
BstNI CCWGG 3 cut(s) 841, 1299, 1488
BstSCI CCNGG 4 cut(s) 520, 839, 1297, 1486
BstSFI CTRYAG 1 cut(s) 1613
BstV1I GCAGC 3 cut(s) 1069, 1596, 1599
BstV2I GAAGAC 1 cut(s) 694
BstX2I RGATCY 3 cut(s) 373, 649, 1640
BstXI CCANNNNNNTGG 1 cut(s) 1392
BstYI RGATCY 3 cut(s) 373, 649, 1640
Bsu15I ATCGAT 1 cut(s) 1378
BsuI GTATCC 1 cut(s) 1298
BsuRI GGCC 4 cut(s) 283, 1068, 1463, 1549
BsuTUI ATCGAT 1 cut(s) 1378
BtsCI GGATG 4 cut(s) 22, 979, 1045, 1463
BtsI GCAGTG 1 cut(s) 759
BtsIMutI CAGTG 7 cut(s) 124, 296, 759, 818, 1167, 1598, 1659
Cac8I GCNNGC 5 cut(s) 196, 339, 623, 979, 1066
CaiI CAGNNNCTG 2 cut(s) 126, 1085
CfoI GCGC 1 cut(s) 1144
Cfr10I RCCGGY 1 cut(s) 1463
Cfr13I GGNCC 6 cut(s) 347, 786, 1178, 1461, 1547, 1719
ClaI ATCGAT 1 cut(s) 1378
Csp6I GTAC 5 cut(s) 153, 331, 893, 1210, 1498
CviAII CATG 3 cut(s) 101, 320, 1070
CviQI GTAC 5 cut(s) 153, 331, 893, 1210, 1498
DdeI CTNAG 4 cut(s) 119, 134, 156, 994
DpnI GATC 8 cut(s) 279, 375, 651, 864, 1026, 1350, 1381, 1642
DpnII GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
EaeI YGGCCR 1 cut(s) 1066
Eam1104I CTCTTC 7 cut(s) 293, 502, 1143, 1242, 1358, 1436, 1709
EarI CTCTTC 7 cut(s) 293, 502, 1143, 1242, 1358, 1436, 1709
Eco31I GGTCTC 2 cut(s) 908, 1560
Eco47I GGWCC 4 cut(s) 347, 786, 1178, 1719
Eco57I CTGAAG 3 cut(s) 273, 887, 989
EcoRII CCWGG 3 cut(s) 839, 1297, 1486
EcoT22I ATGCAT 1 cut(s) 412
FaeI CATG 3 cut(s) 104, 323, 1073
FaqI GGGAC 3 cut(s) 821, 1357, 1409
FatI CATG 3 cut(s) 100, 319, 1069
FauI CCCGC 1 cut(s) 484
Fnu4HI GCNGC 3 cut(s) 1083, 1610, 1613
FokI GGATG 4 cut(s) 9, 986, 1052, 1470
Fsp4HI GCNGC 3 cut(s) 1083, 1610, 1613
FspBI CTAG 1 cut(s) 446
GlaI GCGC 1 cut(s) 1143
GluI GCNGC 3 cut(s) 1083, 1610, 1613
GsaI CCCAGC 1 cut(s) 1344
GsuI CTGGAG 1 cut(s) 1509
HaeIII GGCC 4 cut(s) 283, 1068, 1463, 1549
HapII CCGG 4 cut(s) 58, 521, 1418, 1464
HhaI GCGC 1 cut(s) 1144
Hin1II CATG 3 cut(s) 104, 323, 1073
Hin6I GCGC 1 cut(s) 1142
HinP1I GCGC 1 cut(s) 1142
HincII GTYRAC 1 cut(s) 1590
HindII GTYRAC 1 cut(s) 1590
HindIII AAGCTT 2 cut(s) 335, 354
HinfI GANTC 8 cut(s) 525, 734, 1157, 1190, 1232, 1444, 1586, 1649
HpaII CCGG 4 cut(s) 58, 521, 1418, 1464
HphI GGTGA 3 cut(s) 256, 872, 1615
Hpy166II GTNNAC 5 cut(s) 331, 789, 1212, 1590, 1623
Hpy188I TCNGA 8 cut(s) 373, 566, 577, 867, 902, 969, 1565, 1723
Hpy188III TCNNGA 9 cut(s) 58, 136, 401, 446, 556, 653, 680, 887, 1479
Hpy8I GTNNAC 5 cut(s) 331, 789, 1212, 1590, 1623
Hpy99I CGWCG 1 cut(s) 1631
HpyAV CCTTC 7 cut(s) 36, 248, 862, 964, 1448, 1485, 1537
HpyCH4III ACNGT 7 cut(s) 128, 300, 860, 884, 1313, 1594, 1627
HpyCH4IV ACGT 4 cut(s) 933, 1094, 1273, 1449
HpyF10VI GCNNNNNNNGC 3 cut(s) 257, 1337, 1523
HpyF3I CTNAG 4 cut(s) 119, 134, 156, 994
HpySE526I ACGT 4 cut(s) 933, 1094, 1273, 1449
Hsp92II CATG 3 cut(s) 104, 323, 1073
HspAI GCGC 1 cut(s) 1142
Kpn2I TCCGGA 1 cut(s) 57
Kzo9I GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
LmnI GCTCC 3 cut(s) 138, 523, 1490
Lsp1109I GCAGC 3 cut(s) 1069, 1596, 1599
LweI GCATC 2 cut(s) 31, 964
MaeI CTAG 1 cut(s) 446
MaeII ACGT 4 cut(s) 933, 1094, 1273, 1449
MaeIII GTNAC 6 cut(s) 74, 262, 724, 1445, 1663, 1707
MalI GATC 8 cut(s) 279, 375, 651, 864, 1026, 1350, 1381, 1642
MboI GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
MfeI CAATTG 1 cut(s) 378
MflI RGATCY 3 cut(s) 373, 649, 1640
MlsI TGGCCA 1 cut(s) 1068
MluNI TGGCCA 1 cut(s) 1068
MlyI GAGTC 3 cut(s) 1241, 1453, 1595
MmeI TCCRAC 3 cut(s) 59, 627, 1543
Mox20I TGGCCA 1 cut(s) 1068
Mph1103I ATGCAT 1 cut(s) 412
MroI TCCGGA 1 cut(s) 57
MroXI GAANNNNTTC 1 cut(s) 571
MscI TGGCCA 1 cut(s) 1068
MseI TTAA 4 cut(s) 45, 218, 747, 962
Msp20I TGGCCA 1 cut(s) 1068
MspA1I CMGCKG 3 cut(s) 251, 479, 1082
MspI CCGG 4 cut(s) 58, 521, 1418, 1464
MspR9I CCNGG 4 cut(s) 522, 841, 1299, 1488
MunI CAATTG 1 cut(s) 378
MvaI CCWGG 3 cut(s) 841, 1299, 1488
MwoI GCNNNNNNNGC 3 cut(s) 257, 1337, 1523
NciI CCSGG 1 cut(s) 522
NdeII GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
NlaIII CATG 3 cut(s) 104, 323, 1073
NlaIV GGNNCC 4 cut(s) 140, 162, 1335, 1642
NmuCI GTSAC 2 cut(s) 262, 1445
NsiI ATGCAT 1 cut(s) 412
PdmI GAANNNNTTC 1 cut(s) 571
PfeI GAWTC 5 cut(s) 525, 734, 1157, 1190, 1649
PfoI TCCNGGA 1 cut(s) 520
PkrI GCNGC 3 cut(s) 1084, 1611, 1614
PleI GAGTC 3 cut(s) 1240, 1452, 1594
PpsI GAGTC 3 cut(s) 1240, 1452, 1594
Ppu21I YACGTR 1 cut(s) 1095
PshBI ATTAAT 1 cut(s) 45
PsiI TTATAA 1 cut(s) 875
Psp6I CCWGG 3 cut(s) 839, 1297, 1486
PspFI CCCAGC 1 cut(s) 1340
PspGI CCWGG 3 cut(s) 839, 1297, 1486
PspN4I GGNNCC 4 cut(s) 140, 162, 1335, 1642
PspPI GGNCC 6 cut(s) 347, 786, 1178, 1461, 1547, 1719
PstI CTGCAG 1 cut(s) 1617
PstNI CAGNNNCTG 2 cut(s) 126, 1085
PsuI RGATCY 3 cut(s) 373, 649, 1640
PvuII CAGCTG 2 cut(s) 251, 1082
RsaI GTAC 5 cut(s) 154, 332, 894, 1211, 1499
RsaNI GTAC 5 cut(s) 153, 331, 893, 1210, 1498
SaqAI TTAA 4 cut(s) 45, 218, 747, 962
SatI GCNGC 3 cut(s) 1083, 1610, 1613
Sau3AI GATC 8 cut(s) 277, 373, 649, 862, 1024, 1348, 1379, 1640
Sau96I GGNCC 6 cut(s) 347, 786, 1178, 1461, 1547, 1719
ScaI AGTACT 1 cut(s) 154
SchI GAGTC 3 cut(s) 1241, 1453, 1595
ScrFI CCNGG 4 cut(s) 522, 841, 1299, 1488
SfaNI GCATC 2 cut(s) 31, 964
SfcI CTRYAG 1 cut(s) 1613
SinI GGWCC 4 cut(s) 347, 786, 1178, 1719
SsiI CCGC 2 cut(s) 477, 1331
SspMI CTAG 1 cut(s) 446
StyD4I CCNGG 4 cut(s) 520, 839, 1297, 1486
TaaI ACNGT 7 cut(s) 128, 300, 860, 884, 1313, 1594, 1627
TaiI ACGT 4 cut(s) 936, 1097, 1276, 1452
TaqI TCGA 7 cut(s) 146, 400, 668, 1378, 1434, 1480, 1629
TaqII GACCGA 1 cut(s) 774
TatI WGTACW 4 cut(s) 152, 330, 892, 1209
TfiI GAWTC 5 cut(s) 525, 734, 1157, 1190, 1649
Tru1I TTAA 4 cut(s) 45, 218, 747, 962
Tru9I TTAA 4 cut(s) 45, 218, 747, 962
TscAI CASTG 7 cut(s) 131, 303, 759, 825, 1167, 1605, 1659
TseFI GTSAC 2 cut(s) 262, 1445
TseI GCWGC 3 cut(s) 1082, 1609, 1612
Tsp45I GTSAC 2 cut(s) 262, 1445
TspDTI ATGAA 5 cut(s) 71, 1086, 1148, 1203, 1345
TspGWI ACGGA 4 cut(s) 6, 862, 1191, 1707
TspRI CASTG 7 cut(s) 131, 303, 759, 825, 1167, 1605, 1659
VpaK11BI GGWCC 4 cut(s) 347, 786, 1178, 1719
VspI ATTAAT 1 cut(s) 45
XapI RAATTY 3 cut(s) 178, 593, 812
XbaI TCTAGA 1 cut(s) 445
XcmI CCANNNNNNNNNTGG 1 cut(s) 825
XmnI GAANNNNTTC 1 cut(s) 571
XspI CTAG 1 cut(s) 446
ZrmI AGTACT 1 cut(s) 154
Zsp2I ATGCAT 1 cut(s) 412
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.