Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0015672

Physical Location & Seq

Genomic Coordinates Reverse (-)

33543983 .. 33547409

Gene Structure 3427 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g43300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1488 bp

ATGCATACTCCAGGAACCATCATGCGATCTGTAAGCGCACCTAATGAGGCAGATAAGCCAAAGATTATTGAGCTTGCAGTTGCAGCGATGGAGGAGCTGATCCGAATGGCTCAAATTGGCGAACCGTTGTGGATGAATAGCATTGATGGATCAACCGCTGTGCTCAATGAAGATGAGTACATTCGAACATTTCCTCGTGAAATTGTGCCAAACCAATCTGGATTCAAATGTGAAGCTTCGCGGGAGAGTGCTGTTGTCATCATGAACCACAATAAGCTTGTTGAGATTCTCATGGATGAGAATCAATGGGCAACTGTGTTTTCGGGGATTGTATCAAGGGCTACGACTCTGGATGTGCTATCAGCTGGAGCAGAAGGAAACTACAATGGAGCCTGGCAAGTGATGACAGCAGAATTCCAAGTACCATCTCCATTGGTTCCAACTCGCGAGAGTTATTTTGTGAGGTACTGTAAGCATCATGTTGATGGCACTTGGGCAGTGGTTGATGTCTCCTTGGACAAGCAACTCGGCTATACTTCTGCTCTGAAATCCTGTCAAAGAAGACCTTCTGGTTGTCTCATCCAAGAAATGCCAAATGGATACTCAAAGGTTACTTGGGTTGAACATGTCCGAGTGGATGAAAGAAGAGTTCACAATCTGTACAAGCAGCTGGTTAACTCTGGCCTTGCATTCGGTGCGAAAAAATGGGTCGCCACCTTGGACCGCCAATGTGAGCGTCTCGCCAGAGCCTCGGCGACAAGCATCCCTACCGTTGAGGTGTATGCGATAACAGCTGAAGAAGGGAGGAAGAGCATGTTGAAGCTGGCCCAGAGAATGGTTAGAAGTTTCTGTGTTGGAGTGAGTGCATCTACAACTCATATATGGACGACGCTGTCTGGAACAGGTGCTGATGATGTTTGTGTGATGACCCAAAAGAATGCGCATGATCCAGGAAGGCCTCAGGGCATTGTGCTCACTGCTGCAACCTCATTCCGGCTTCCTGTCCCCCCGACAAGGGTCTTCAAGTTCCTTTGTGATAAGAACTCCCGAAATCAGAGGGATATCCTCTGCAATGGTGGCGTTGTGCAGGAAATGGCACACATAGCCAACGGACGTGACACTGGGAACTGCGTGTCACTACTTCGGATAAATAGTGCCGATTCTAGGCAGAGCAACATGCTCATACTGCAGGAGAGCTGCACTGACCACACGGCATCATATGTAATCTATGCGCCTTTGGACATAGTTTCTGTGAACACCGTGCTTAGTGGCAGCGATCCTGACTACGTAGCCCTGCTGCCATCTGGGTGTGCTATACTCCCAGAACCTGAAACTGGAGGGTCCATGTTGACTGTGGCCTTCCAGTTTCTGGTGGATTCGGTTCCCACCGCGAGACTCTCTCAGGGGTCTATGGCACCAGCTAAGATCCTCATAGTTGGCACGGTGGAGCAGATGAAGGCCTCATTGTCCTTGGACAATGAAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

496

Amino Acids

54.1

Weight (kDa)

6.1

Isoelectric Point (pI)

35.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	25 - 246	2.9e-49	START domain
PDF2_C	PF25797	267 - 490	1.4e-77	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015672)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g43300
malus_domestica	MD17G1095100.v1.1
rosa_chinensis	RchiOBHm_Chr3g0470751
rosa_laevigata	RLG00000024245
rosa_multiflora	Rmu_sc0002790.1_g000010 Rmu_sc0006168.1_g000005 Rmu_sc0006168.1_g000012 Rmu_sc0006168.1_g000014
rosa_roxburghii	Rroxscaffold_6G00410600
rosa_samantha	Rh3AG162000 Rh3BG186900 Rh3BG187100 Rh3CG177100 Rh3CG177300 Rh3DG188600 Rh3DG188700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	892
Acc16I	TGCGCA	1 cut(s)	942
AccB1I	GGYRCC	1 cut(s)	1414
AccB7I	CCANNNNNTGG	2 cut(s)	835, 1369
AccII	CGCG	3 cut(s)	241, 447, 1391
AciI	CCGC	4 cut(s)	156, 241, 724, 1389
AclWI	GGATC	5 cut(s)	94, 157, 941, 1271, 1420
AcsI	RAATTY	1 cut(s)	413
AcuI	CTGAAG	1 cut(s)	816
AfaI	GTAC	4 cut(s)	179, 423, 467, 662
AfiI	CCNNNNNNNGG	7 cut(s)	835, 993, 1014, 1015, 1164, 1334, 1369
AflIII	ACRYGT	1 cut(s)	625
AgsI	TTSAA	4 cut(s)	226, 623, 820, 1024
AjiI	CACGTC	1 cut(s)	1115
AjnI	CCWGG	3 cut(s)	10, 392, 949
Alw21I	GWGCWC	2 cut(s)	165, 975
Alw26I	GTCTC	4 cut(s)	514, 581, 743, 1387
AlwI	GGATC	5 cut(s)	94, 157, 941, 1271, 1420
AlwNI	CAGNNNCTG	3 cut(s)	908, 1328, 1369
AoxI	GGCC	5 cut(s)	682, 825, 956, 1356, 1458
ApeKI	GCWGC	6 cut(s)	83, 667, 980, 1197, 1272, 1297
ApoI	RAATTY	1 cut(s)	413
Asp700I	GAANNNNTTC	1 cut(s)	565
AspLEI	GCGC	3 cut(s)	38, 943, 1234
AspS9I	GGNCC	3 cut(s)	721, 826, 1341
AsuII	TTCGAA	1 cut(s)	184
AvaII	GGWCC	2 cut(s)	721, 1341
AxyI	CCTNAGG	1 cut(s)	960
BanI	GGYRCC	1 cut(s)	1414
BauI	CACGAG	1 cut(s)	195
BbsI	GAAGAC	2 cut(s)	568, 1012
Bbv12I	GWGCWC	2 cut(s)	165, 975
BbvI	GCAGC	6 cut(s)	95, 679, 967, 1184, 1284, 1284
BccI	CCATC	6 cut(s)	26, 82, 140, 433, 479, 1309
BceAI	ACGGC	1 cut(s)	1227
BciT130I	CCWGG	3 cut(s)	12, 394, 951
BciVI	GTATCC	1 cut(s)	593
BcoDI	GTCTC	4 cut(s)	514, 581, 743, 1387
BfaI	CTAG	1 cut(s)	1164
BfmI	CTRYAG	1 cut(s)	1187
BfuI	GTATCC	1 cut(s)	593
BisI	GCNGC	6 cut(s)	84, 668, 981, 1198, 1273, 1298
BlsI	GCNGC	6 cut(s)	85, 669, 982, 1199, 1274, 1299
Bme1390I	CCNGG	3 cut(s)	12, 394, 951
Bme18I	GGWCC	2 cut(s)	721, 1341
BmgBI	CACGTC	1 cut(s)	1115
BmgT120I	GGNCC	3 cut(s)	721, 826, 1341
BmiI	GGNNCC	6 cut(s)	16, 391, 438, 1342, 1383, 1416
BmrFI	CCNGG	3 cut(s)	12, 394, 951
BmrI	ACTGGG	1 cut(s)	1131
BmsI	GCATC	4 cut(s)	484, 771, 875, 1223
BmuI	ACTGGG	1 cut(s)	1131
BoxI	GACNNNNGTC	1 cut(s)	1016
BpiI	GAAGAC	2 cut(s)	568, 1012
BplI	GAGNNNNNCTC	2 cut(s)	1384, 1416
BpmI	CTGGAG	2 cut(s)	387, 1356
Bpu14I	TTCGAA	1 cut(s)	184
BsaAI	YACGTR	1 cut(s)	1288
BsaBI	GATNNNNATC	1 cut(s)	300
BsaJI	CCNNGG	4 cut(s)	513, 717, 750, 1470
Bsc4I	CCNNNNNNNGG	7 cut(s)	835, 993, 1014, 1015, 1164, 1334, 1369
Bse1I	ACTGG	3 cut(s)	1126, 1339, 1363
Bse21I	CCTNAGG	1 cut(s)	960
Bse3DI	GCAATG	1 cut(s)	1078
Bse8I	GATNNNNATC	1 cut(s)	300
BseBI	CCWGG	3 cut(s)	12, 394, 951
BseDI	CCNNGG	4 cut(s)	513, 717, 750, 1470
BseGI	GGATG	6 cut(s)	138, 301, 358, 579, 643, 762
BseJI	GATNNNNATC	1 cut(s)	300
BseLI	CCNNNNNNNGG	7 cut(s)	835, 993, 1014, 1015, 1164, 1334, 1369
BseMI	GCAATG	1 cut(s)	1078
BseMII	CTCAG	2 cut(s)	974, 1415
BseNI	ACTGG	3 cut(s)	1126, 1339, 1363
BseRI	GAGGAG	1 cut(s)	107
BseXI	GCAGC	6 cut(s)	95, 679, 967, 1184, 1284, 1284
BsgI	GTGCAG	2 cut(s)	1106, 1183
Bsh1236I	CGCG	3 cut(s)	241, 447, 1391
BshFI	GGCC	5 cut(s)	684, 827, 958, 1358, 1460
BshNI	GGYRCC	1 cut(s)	1414
BsiHKAI	GWGCWC	2 cut(s)	165, 975
BsiSI	CCGG	1 cut(s)	994
BslFI	GGGAC	1 cut(s)	989
BslI	CCNNNNNNNGG	7 cut(s)	835, 993, 1014, 1015, 1164, 1334, 1369
BsmAI	GTCTC	4 cut(s)	514, 581, 743, 1387
BsmBI	CGTCTC	1 cut(s)	743
BsmFI	GGGAC	1 cut(s)	989
BsmI	GAATGC	2 cut(s)	689, 943
BsnI	GGCC	5 cut(s)	684, 827, 958, 1358, 1460
Bsp119I	TTCGAA	1 cut(s)	184
Bsp1286I	GDGCHC	2 cut(s)	165, 975
Bsp1407I	TGTACA	1 cut(s)	660
Bsp143I	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
Bsp68I	TCGCGA	1 cut(s)	447
BspACI	CCGC	4 cut(s)	156, 241, 724, 1389
BspANI	GGCC	5 cut(s)	684, 827, 958, 1358, 1460
BspCNI	CTCAG	2 cut(s)	973, 1414
BspFNI	CGCG	3 cut(s)	241, 447, 1391
BspHI	TCATGA	1 cut(s)	261
BspLI	GGNNCC	6 cut(s)	16, 391, 438, 1342, 1383, 1416
BspMAI	CTGCAG	1 cut(s)	1191
BspPI	GGATC	5 cut(s)	94, 157, 941, 1271, 1420
BspQI	GCTCTTC	1 cut(s)	803
BspT104I	TTCGAA	1 cut(s)	184
BspT107I	GGYRCC	1 cut(s)	1414
BsrDI	GCAATG	1 cut(s)	1078
BsrGI	TGTACA	1 cut(s)	660
BsrI	ACTGG	3 cut(s)	1126, 1339, 1363
BssECI	CCNNGG	4 cut(s)	513, 717, 750, 1470
BssMI	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
BssSI	CACGAG	1 cut(s)	195
BssT1I	CCWWGG	3 cut(s)	513, 717, 1470
Bst2BI	CACGAG	1 cut(s)	195
Bst2UI	CCWGG	3 cut(s)	12, 394, 951
Bst4CI	ACNGT	7 cut(s)	126, 316, 470, 772, 1261, 1354, 1444
Bst6I	CTCTTC	2 cut(s)	640, 803
BstAPI	GCANNNNNTGC	1 cut(s)	695
BstAUI	TGTACA	1 cut(s)	660
BstBAI	YACGTR	1 cut(s)	1288
BstBI	TTCGAA	1 cut(s)	184
BstC8I	GCNNGC	2 cut(s)	75, 825
BstDEI	CTNAG	4 cut(s)	960, 1265, 1401, 1422
BstF5I	GGATG	6 cut(s)	138, 301, 358, 579, 643, 762
BstFNI	CGCG	3 cut(s)	241, 447, 1391
BstHHI	GCGC	3 cut(s)	38, 943, 1234
BstKTI	GATC	6 cut(s)	29, 102, 152, 949, 1279, 1428
BstMAI	GTCTC	4 cut(s)	514, 581, 743, 1387
BstMBI	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
BstMWI	GCNNNNNNNGC	6 cut(s)	83, 695, 791, 1077, 1103, 1186
BstNI	CCWGG	3 cut(s)	12, 394, 951
BstNSI	RCATGY	3 cut(s)	629, 817, 1180
BstPAI	GACNNNNGTC	1 cut(s)	1016
BstSCI	CCNGG	3 cut(s)	10, 392, 949
BstSFI	CTRYAG	1 cut(s)	1187
BstSNI	TACGTA	1 cut(s)	1288
BstUI	CGCG	3 cut(s)	241, 447, 1391
BstV1I	GCAGC	6 cut(s)	95, 679, 967, 1184, 1284, 1284
BstV2I	GAAGAC	2 cut(s)	568, 1012
BstX2I	RGATCY	1 cut(s)	1425
BstYI	RGATCY	1 cut(s)	1425
Bsu36I	CCTNAGG	1 cut(s)	960
BsuI	GTATCC	1 cut(s)	593
BsuRI	GGCC	5 cut(s)	684, 827, 958, 1358, 1460
BtgZI	GCGATG	1 cut(s)	101
BtrI	CACGTC	1 cut(s)	1115
BtsCI	GGATG	6 cut(s)	138, 301, 358, 579, 643, 762
BtsI	GCAGTG	2 cut(s)	504, 975
BtsIMutI	CAGTG	4 cut(s)	504, 975, 1119, 1200
BtuMI	TCGCGA	1 cut(s)	447
Cac8I	GCNNGC	2 cut(s)	75, 825
CaiI	CAGNNNCTG	3 cut(s)	908, 1328, 1369
CciI	TCATGA	1 cut(s)	261
CfoI	GCGC	3 cut(s)	38, 943, 1234
Cfr13I	GGNCC	3 cut(s)	721, 826, 1341
CseI	GACGC	2 cut(s)	725, 898
Csp6I	GTAC	4 cut(s)	178, 422, 466, 661
CviQI	GTAC	4 cut(s)	178, 422, 466, 661
DdeI	CTNAG	4 cut(s)	960, 1265, 1401, 1422
DpnI	GATC	6 cut(s)	28, 101, 151, 948, 1278, 1427
DpnII	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
DrdI	GACNNNNNNGTC	1 cut(s)	892
DseDI	GACNNNNNNGTC	1 cut(s)	892
Eam1104I	CTCTTC	2 cut(s)	640, 803
EarI	CTCTTC	2 cut(s)	640, 803
Eco105I	TACGTA	1 cut(s)	1288
Eco130I	CCWWGG	3 cut(s)	513, 717, 1470
Eco147I	AGGCCT	2 cut(s)	958, 1460
Eco32I	GATATC	1 cut(s)	1063
Eco47I	GGWCC	2 cut(s)	721, 1341
Eco57I	CTGAAG	1 cut(s)	816
Eco81I	CCTNAGG	1 cut(s)	960
EcoRI	GAATTC	1 cut(s)	413
EcoRII	CCWGG	3 cut(s)	10, 392, 949
EcoRV	GATATC	1 cut(s)	1063
EcoT14I	CCWWGG	3 cut(s)	513, 717, 1470
EcoT22I	ATGCAT	1 cut(s)	6
ErhI	CCWWGG	3 cut(s)	513, 717, 1470
Esp3I	CGTCTC	1 cut(s)	743
FalI	AAGNNNNNCTT	2 cut(s)	550, 582
FaqI	GGGAC	1 cut(s)	989
FauI	CCCGC	1 cut(s)	234
FauNDI	CATATG	1 cut(s)	1219
Fnu4HI	GCNGC	6 cut(s)	84, 668, 981, 1198, 1273, 1298
FokI	GGATG	6 cut(s)	145, 308, 365, 566, 650, 749
Fsp4HI	GCNGC	6 cut(s)	84, 668, 981, 1198, 1273, 1298
FspAI	RTGCGCAY	1 cut(s)	942
FspBI	CTAG	1 cut(s)	1164
FspI	TGCGCA	1 cut(s)	942
GlaI	GCGC	3 cut(s)	37, 942, 1233
GluI	GCNGC	6 cut(s)	84, 668, 981, 1198, 1273, 1298
GsuI	CTGGAG	2 cut(s)	387, 1356
HaeIII	GGCC	5 cut(s)	684, 827, 958, 1358, 1460
HapII	CCGG	1 cut(s)	994
HgaI	GACGC	2 cut(s)	725, 898
HhaI	GCGC	3 cut(s)	38, 943, 1234
Hin6I	GCGC	3 cut(s)	36, 941, 1232
HinP1I	GCGC	3 cut(s)	36, 941, 1232
HincII	GTYRAC	2 cut(s)	676, 1350
HindII	GTYRAC	2 cut(s)	676, 1350
HindIII	AAGCTT	2 cut(s)	234, 275
HinfI	GANTC	7 cut(s)	222, 286, 301, 346, 1160, 1376, 1395
HpaI	GTTAAC	1 cut(s)	676
HpaII	CCGG	1 cut(s)	994
Hpy166II	GTNNAC	4 cut(s)	652, 676, 1255, 1350
Hpy188I	TCNGA	5 cut(s)	104, 546, 632, 1056, 1146
Hpy188III	TCNNGA	8 cut(s)	197, 219, 262, 350, 446, 897, 1047, 1280
Hpy8I	GTNNAC	4 cut(s)	652, 676, 1255, 1350
Hpy99I	CGWCG	1 cut(s)	892
HpyAV	CCTTC	6 cut(s)	368, 576, 794, 948, 1369, 1450
HpyCH4III	ACNGT	7 cut(s)	126, 316, 470, 772, 1261, 1354, 1444
HpyCH4IV	ACGT	2 cut(s)	1114, 1287
HpyF10VI	GCNNNNNNNGC	6 cut(s)	83, 695, 791, 1077, 1103, 1186
HpyF3I	CTNAG	4 cut(s)	960, 1265, 1401, 1422
HpySE526I	ACGT	2 cut(s)	1114, 1287
HspAI	GCGC	3 cut(s)	36, 941, 1232
KspAI	GTTAAC	1 cut(s)	676
Kzo9I	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
LguI	GCTCTTC	1 cut(s)	803
LmnI	GCTCC	4 cut(s)	94, 368, 389, 1447
Lsp1109I	GCAGC	6 cut(s)	95, 679, 967, 1184, 1284, 1284
LweI	GCATC	4 cut(s)	484, 771, 875, 1223
MaeI	CTAG	1 cut(s)	1164
MaeII	ACGT	2 cut(s)	1114, 1287
MaeIII	GTNAC	3 cut(s)	610, 1115, 1134
MalI	GATC	6 cut(s)	28, 101, 151, 948, 1278, 1427
MboI	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
MboII	GAAGA	6 cut(s)	182, 573, 657, 809, 820, 1012
MflI	RGATCY	1 cut(s)	1425
MhlI	GDGCHC	2 cut(s)	165, 975
MluCI	AATT	3 cut(s)	114, 201, 413
MlyI	GAGTC	2 cut(s)	340, 1389
MmeI	TCCRAC	2 cut(s)	464, 835
Mph1103I	ATGCAT	1 cut(s)	6
MroXI	GAANNNNTTC	1 cut(s)	565
MseI	TTAA	1 cut(s)	675
MslI	CAYNNNNRTG	2 cut(s)	483, 1306
MspA1I	CMGCKG	4 cut(s)	158, 365, 670, 794
MspI	CCGG	1 cut(s)	994
MspR9I	CCNGG	3 cut(s)	12, 394, 951
Mva1269I	GAATGC	2 cut(s)	689, 943
MvaI	CCWGG	3 cut(s)	12, 394, 951
MvnI	CGCG	3 cut(s)	241, 447, 1391
MwoI	GCNNNNNNNGC	6 cut(s)	83, 695, 791, 1077, 1103, 1186
NdeI	CATATG	1 cut(s)	1219
NdeII	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
NlaIV	GGNNCC	6 cut(s)	16, 391, 438, 1342, 1383, 1416
NmeAIII	GCCGAG	2 cut(s)	507, 731
NmuCI	GTSAC	2 cut(s)	1115, 1134
NruI	TCGCGA	1 cut(s)	447
NsbI	TGCGCA	1 cut(s)	942
NsiI	ATGCAT	1 cut(s)	6
NspI	RCATGY	3 cut(s)	629, 817, 1180
NspV	TTCGAA	1 cut(s)	184
PagI	TCATGA	1 cut(s)	261
PceI	AGGCCT	2 cut(s)	958, 1460
PciI	ACATGT	1 cut(s)	625
PciSI	GCTCTTC	1 cut(s)	803
PctI	GAATGC	2 cut(s)	689, 943
PdmI	GAANNNNTTC	1 cut(s)	565
PfeI	GAWTC	5 cut(s)	222, 286, 301, 1160, 1376
PflFI	GACNNNGTC	1 cut(s)	892
PflMI	CCANNNNNTGG	2 cut(s)	835, 1369
PfoI	TCCNGGA	2 cut(s)	10, 949
PkrI	GCNGC	6 cut(s)	85, 669, 982, 1199, 1274, 1299
PleI	GAGTC	2 cut(s)	340, 1389
PpsI	GAGTC	2 cut(s)	340, 1389
Ppu21I	YACGTR	1 cut(s)	1288
PscI	ACATGT	1 cut(s)	625
PshAI	GACNNNNGTC	1 cut(s)	1016
Psp6I	CCWGG	3 cut(s)	10, 392, 949
PspGI	CCWGG	3 cut(s)	10, 392, 949
PspN4I	GGNNCC	6 cut(s)	16, 391, 438, 1342, 1383, 1416
PspPI	GGNCC	3 cut(s)	721, 826, 1341
PstI	CTGCAG	1 cut(s)	1191
PstNI	CAGNNNCTG	3 cut(s)	908, 1328, 1369
PsuI	RGATCY	1 cut(s)	1425
PsyI	GACNNNGTC	1 cut(s)	892
PvuII	CAGCTG	3 cut(s)	365, 670, 794
RruI	TCGCGA	1 cut(s)	447
RsaI	GTAC	4 cut(s)	179, 423, 467, 662
RsaNI	GTAC	4 cut(s)	178, 422, 466, 661
RseI	CAYNNNNRTG	2 cut(s)	483, 1306
SapI	GCTCTTC	1 cut(s)	803
SaqAI	TTAA	1 cut(s)	675
SatI	GCNGC	6 cut(s)	84, 668, 981, 1198, 1273, 1298
Sau3AI	GATC	6 cut(s)	26, 99, 149, 946, 1276, 1425
Sau96I	GGNCC	3 cut(s)	721, 826, 1341
SchI	GAGTC	2 cut(s)	340, 1389
ScrFI	CCNGG	3 cut(s)	12, 394, 951
SduI	GDGCHC	2 cut(s)	165, 975
SfaNI	GCATC	4 cut(s)	484, 771, 875, 1223
SfcI	CTRYAG	1 cut(s)	1187
SfuI	TTCGAA	1 cut(s)	184
SinI	GGWCC	2 cut(s)	721, 1341
SmiMI	CAYNNNNRTG	2 cut(s)	483, 1306
SnaBI	TACGTA	1 cut(s)	1288
Sse9I	AATT	3 cut(s)	114, 201, 413
SseBI	AGGCCT	2 cut(s)	958, 1460
SsiI	CCGC	4 cut(s)	156, 241, 724, 1389
SspMI	CTAG	1 cut(s)	1164
StuI	AGGCCT	2 cut(s)	958, 1460
StyD4I	CCNGG	3 cut(s)	10, 392, 949
StyI	CCWWGG	3 cut(s)	513, 717, 1470
TaaI	ACNGT	7 cut(s)	126, 316, 470, 772, 1261, 1354, 1444
TaiI	ACGT	2 cut(s)	1117, 1290
TaqI	TCGA	1 cut(s)	184
TasI	AATT	3 cut(s)	114, 201, 413
TatI	WGTACW	2 cut(s)	177, 660
TfiI	GAWTC	5 cut(s)	222, 286, 301, 1160, 1376
Tru1I	TTAA	1 cut(s)	675
Tru9I	TTAA	1 cut(s)	675
TscAI	CASTG	4 cut(s)	504, 982, 1126, 1207
TseFI	GTSAC	2 cut(s)	1115, 1134
TseI	GCWGC	6 cut(s)	83, 667, 980, 1197, 1272, 1297
Tsp45I	GTSAC	2 cut(s)	1115, 1134
TspDTI	ATGAA	5 cut(s)	149, 183, 278, 654, 1469
TspGWI	ACGGA	1 cut(s)	1125
TspRI	CASTG	4 cut(s)	504, 982, 1126, 1207
Tth111I	GACNNNGTC	1 cut(s)	892
Van91I	CCANNNNNTGG	2 cut(s)	835, 1369
VpaK11BI	GGWCC	2 cut(s)	721, 1341
XapI	RAATTY	1 cut(s)	413
XceI	RCATGY	3 cut(s)	629, 817, 1180
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1351
XmnI	GAANNNNTTC	1 cut(s)	565
XspI	CTAG	1 cut(s)	1164
Zsp2I	ATGCAT	1 cut(s)	6

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.