Homeobox-leucine zipper protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_6g43300 |
| malus_domestica | MD17G1095100.v1.1 |
| rosa_chinensis | RchiOBHm_Chr3g0470751 |
| rosa_laevigata | RLG00000024245 |
| rosa_multiflora | Rmu_sc0002790.1_g000010 Rmu_sc0006168.1_g000005 Rmu_sc0006168.1_g000012 Rmu_sc0006168.1_g000014 |
| rosa_roxburghii | Rroxscaffold_6G00410600 |
| rosa_samantha | Rh3AG162000 Rh3BG186900 Rh3BG187100 Rh3CG177100 Rh3CG177300 Rh3DG188600 Rh3DG188700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 2 cut(s) | 244, 531 |
| AciI | CCGC | 5 cut(s) | 244, 271, 531, 700, 859 |
| AclWI | GGATC | 4 cut(s) | 160, 791, 966, 1209 |
| AcoI | YGGCCR | 1 cut(s) | 681 |
| AcsI | RAATTY | 2 cut(s) | 416, 958 |
| AcuI | CTGAAG | 1 cut(s) | 1214 |
| AcvI | CACGTG | 1 cut(s) | 1146 |
| AdeI | CACNNNGTG | 1 cut(s) | 44 |
| AfaI | GTAC | 6 cut(s) | 182, 426, 470, 909, 1059, 1107 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 843, 864, 865, 948 |
| AflIII | ACRYGT | 1 cut(s) | 191 |
| AgsI | TTSAA | 4 cut(s) | 229, 422, 550, 925 |
| AjnI | CCWGG | 2 cut(s) | 220, 799 |
| AluBI | AGCT | 9 cut(s) | 76, 89, 100, 239, 280, 344, 749, 1001, 1245 |
| AluI | AGCT | 9 cut(s) | 76, 89, 100, 239, 280, 344, 749, 1001, 1245 |
| Alw21I | GWGCWC | 4 cut(s) | 40, 168, 825, 1145 |
| Alw26I | GTCTC | 2 cut(s) | 9, 584 |
| Alw44I | GTGCAC | 2 cut(s) | 36, 1141 |
| AlwI | GGATC | 4 cut(s) | 160, 791, 966, 1209 |
| Ama87I | CYCGRG | 1 cut(s) | 1154 |
| AoxI | GGCC | 2 cut(s) | 681, 806 |
| ApaLI | GTGCAC | 2 cut(s) | 36, 1141 |
| ApeKI | GCWGC | 5 cut(s) | 478, 740, 743, 746, 830 |
| ApoI | RAATTY | 2 cut(s) | 416, 958 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 568 |
| AsuC2I | CCSGG | 3 cut(s) | 1038, 1155, 1156 |
| AsuHPI | GGTGA | 2 cut(s) | 461, 1106 |
| AsuII | TTCGAA | 1 cut(s) | 187 |
| AvaI | CYCGRG | 1 cut(s) | 1154 |
| AxyI | CCTNAGG | 1 cut(s) | 810 |
| BaeGI | GKGCMC | 2 cut(s) | 40, 1145 |
| BalI | TGGCCA | 1 cut(s) | 683 |
| BauI | CACGAG | 2 cut(s) | 198, 694 |
| BbrPI | CACGTG | 1 cut(s) | 1146 |
| BbsI | GAAGAC | 1 cut(s) | 571 |
| Bbv12I | GWGCWC | 4 cut(s) | 40, 168, 825, 1145 |
| BbvI | GCAGC | 5 cut(s) | 490, 727, 730, 758, 842 |
| BccI | CCATC | 4 cut(s) | 143, 436, 482, 670 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1051, 1085 |
| BciT130I | CCWGG | 2 cut(s) | 222, 801 |
| BcnI | CCSGG | 3 cut(s) | 1038, 1155, 1156 |
| BcoDI | GTCTC | 2 cut(s) | 9, 584 |
| BfaI | CTAG | 2 cut(s) | 42, 707 |
| BfmI | CTRYAG | 2 cut(s) | 744, 828 |
| BisI | GCNGC | 5 cut(s) | 479, 741, 744, 747, 831 |
| BlsI | GCNGC | 5 cut(s) | 480, 742, 745, 748, 832 |
| Bme1390I | CCNGG | 5 cut(s) | 222, 801, 1038, 1155, 1156 |
| BmeT110I | CYCGRG | 1 cut(s) | 1154 |
| BmiI | GGNNCC | 2 cut(s) | 394, 441 |
| BmrFI | CCNGG | 5 cut(s) | 222, 801, 1038, 1155, 1156 |
| BpiI | GAAGAC | 1 cut(s) | 571 |
| BpmI | CTGGAG | 1 cut(s) | 1207 |
| Bpu14I | TTCGAA | 1 cut(s) | 187 |
| BpuMI | CCSGG | 3 cut(s) | 1038, 1155, 1156 |
| BsaAI | YACGTR | 2 cut(s) | 911, 1146 |
| BsaBI | GATNNNNATC | 1 cut(s) | 303 |
| BsaJI | CCNNGG | 3 cut(s) | 516, 1036, 1154 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 720, 750, 1116, 1146 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 843, 864, 865, 948 |
| Bse118I | RCCGGY | 1 cut(s) | 1171 |
| Bse1I | ACTGG | 4 cut(s) | 322, 373, 441, 451 |
| Bse21I | CCTNAGG | 1 cut(s) | 810 |
| Bse8I | GATNNNNATC | 1 cut(s) | 303 |
| BseBI | CCWGG | 2 cut(s) | 222, 801 |
| BseDI | CCNNGG | 3 cut(s) | 516, 1036, 1154 |
| BseGI | GGATG | 8 cut(s) | 141, 181, 304, 361, 582, 681, 799, 988 |
| BseJI | GATNNNNATC | 1 cut(s) | 303 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 843, 864, 865, 948 |
| BseMII | CTCAG | 1 cut(s) | 824 |
| BseNI | ACTGG | 4 cut(s) | 322, 373, 441, 451 |
| BseRI | GAGGAG | 2 cut(s) | 110, 683 |
| BseSI | GKGCMC | 2 cut(s) | 40, 1145 |
| BseXI | GCAGC | 5 cut(s) | 490, 727, 730, 758, 842 |
| BseYI | CCCAGC | 2 cut(s) | 953, 1082 |
| Bsh1236I | CGCG | 2 cut(s) | 244, 531 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1012 |
| BshFI | GGCC | 2 cut(s) | 683, 808 |
| BsiEI | CGRYCG | 1 cut(s) | 1012 |
| BsiHKAI | GWGCWC | 4 cut(s) | 40, 168, 825, 1145 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1154 |
| BsiSI | CCGG | 4 cut(s) | 378, 1038, 1155, 1172 |
| BslFI | GGGAC | 1 cut(s) | 627 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 843, 864, 865, 948 |
| BsmAI | GTCTC | 2 cut(s) | 9, 584 |
| BsmFI | GGGAC | 1 cut(s) | 627 |
| BsnI | GGCC | 2 cut(s) | 683, 808 |
| BsoBI | CYCGRG | 1 cut(s) | 1154 |
| Bsp119I | TTCGAA | 1 cut(s) | 187 |
| Bsp1286I | GDGCHC | 4 cut(s) | 40, 168, 825, 1145 |
| Bsp143I | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| BspACI | CCGC | 5 cut(s) | 244, 271, 531, 700, 859 |
| BspANI | GGCC | 2 cut(s) | 683, 808 |
| BspCNI | CTCAG | 1 cut(s) | 823 |
| BspFNI | CGCG | 2 cut(s) | 244, 531 |
| BspLI | GGNNCC | 2 cut(s) | 394, 441 |
| BspMAI | CTGCAG | 2 cut(s) | 748, 832 |
| BspPI | GGATC | 4 cut(s) | 160, 791, 966, 1209 |
| BspT104I | TTCGAA | 1 cut(s) | 187 |
| BsrFI | RCCGGY | 1 cut(s) | 1171 |
| BsrI | ACTGG | 4 cut(s) | 322, 373, 441, 451 |
| BssAI | RCCGGY | 1 cut(s) | 1171 |
| BssECI | CCNNGG | 3 cut(s) | 516, 1036, 1154 |
| BssMI | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| BssSI | CACGAG | 2 cut(s) | 198, 694 |
| BssT1I | CCWWGG | 1 cut(s) | 516 |
| Bst2BI | CACGAG | 2 cut(s) | 198, 694 |
| Bst2UI | CCWGG | 2 cut(s) | 222, 801 |
| Bst4CI | ACNGT | 4 cut(s) | 163, 473, 1057, 1078 |
| BstBAI | YACGTR | 2 cut(s) | 911, 1146 |
| BstBI | TTCGAA | 1 cut(s) | 187 |
| BstC8I | GCNNGC | 5 cut(s) | 78, 125, 483, 657, 1173 |
| BstDEI | CTNAG | 2 cut(s) | 345, 810 |
| BstF5I | GGATG | 8 cut(s) | 141, 181, 304, 361, 582, 681, 799, 988 |
| BstFNI | CGCG | 2 cut(s) | 244, 531 |
| BstKTI | GATC | 6 cut(s) | 155, 799, 974, 986, 1012, 1217 |
| BstMAI | GTCTC | 2 cut(s) | 9, 584 |
| BstMBI | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| BstMCI | CGRYCG | 1 cut(s) | 1012 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 86, 746, 755 |
| BstNI | CCWGG | 2 cut(s) | 222, 801 |
| BstNSI | RCATGY | 2 cut(s) | 195, 485 |
| BstSCI | CCNGG | 5 cut(s) | 220, 799, 1036, 1153, 1154 |
| BstSFI | CTRYAG | 2 cut(s) | 744, 828 |
| BstSLI | GKGCMC | 2 cut(s) | 40, 1145 |
| BstUI | CGCG | 2 cut(s) | 244, 531 |
| BstV1I | GCAGC | 5 cut(s) | 490, 727, 730, 758, 842 |
| BstV2I | GAAGAC | 1 cut(s) | 571 |
| BstX2I | RGATCY | 2 cut(s) | 971, 1214 |
| BstYI | RGATCY | 2 cut(s) | 971, 1214 |
| Bsu36I | CCTNAGG | 1 cut(s) | 810 |
| BsuRI | GGCC | 2 cut(s) | 683, 808 |
| BtsCI | GGATG | 8 cut(s) | 141, 181, 304, 361, 582, 681, 799, 988 |
| BtsI | GCAGTG | 2 cut(s) | 507, 825 |
| BtsIMutI | CAGTG | 5 cut(s) | 40, 159, 434, 507, 825 |
| Cac8I | GCNNGC | 5 cut(s) | 78, 125, 483, 657, 1173 |
| Cfr10I | RCCGGY | 1 cut(s) | 1171 |
| Cfr9I | CCCGGG | 1 cut(s) | 1154 |
| Csp6I | GTAC | 6 cut(s) | 181, 425, 469, 908, 1058, 1106 |
| CviAII | CATG | 6 cut(s) | 64, 192, 295, 482, 555, 1101 |
| CviQI | GTAC | 6 cut(s) | 181, 425, 469, 908, 1058, 1106 |
| DdeI | CTNAG | 2 cut(s) | 345, 810 |
| DpnI | GATC | 6 cut(s) | 154, 798, 973, 985, 1011, 1216 |
| DpnII | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| DraIII | CACNNNGTG | 1 cut(s) | 44 |
| EaeI | YGGCCR | 1 cut(s) | 681 |
| Eco130I | CCWWGG | 1 cut(s) | 516 |
| Eco147I | AGGCCT | 1 cut(s) | 808 |
| Eco32I | GATATC | 1 cut(s) | 511 |
| Eco57I | CTGAAG | 1 cut(s) | 1214 |
| Eco72I | CACGTG | 1 cut(s) | 1146 |
| Eco81I | CCTNAGG | 1 cut(s) | 810 |
| Eco88I | CYCGRG | 1 cut(s) | 1154 |
| EcoRI | GAATTC | 1 cut(s) | 958 |
| EcoRII | CCWGG | 2 cut(s) | 220, 799 |
| EcoRV | GATATC | 1 cut(s) | 511 |
| EcoT14I | CCWWGG | 1 cut(s) | 516 |
| ErhI | CCWWGG | 1 cut(s) | 516 |
| FaeI | CATG | 6 cut(s) | 67, 195, 298, 485, 558, 1104 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 553, 585 |
| FaqI | GGGAC | 1 cut(s) | 627 |
| FatI | CATG | 6 cut(s) | 63, 191, 294, 481, 554, 1100 |
| FauI | CCCGC | 2 cut(s) | 237, 866 |
| Fnu4HI | GCNGC | 5 cut(s) | 479, 741, 744, 747, 831 |
| FokI | GGATG | 8 cut(s) | 148, 188, 311, 368, 569, 688, 806, 975 |
| Fsp4HI | GCNGC | 5 cut(s) | 479, 741, 744, 747, 831 |
| FspBI | CTAG | 2 cut(s) | 42, 707 |
| GluI | GCNGC | 5 cut(s) | 479, 741, 744, 747, 831 |
| GsaI | CCCAGC | 2 cut(s) | 957, 1086 |
| GsuI | CTGGAG | 1 cut(s) | 1207 |
| HaeIII | GGCC | 2 cut(s) | 683, 808 |
| HapII | CCGG | 4 cut(s) | 378, 1038, 1155, 1172 |
| Hin1II | CATG | 6 cut(s) | 67, 195, 298, 485, 558, 1104 |
| HincII | GTYRAC | 2 cut(s) | 315, 1114 |
| HindII | GTYRAC | 2 cut(s) | 315, 1114 |
| HindIII | AAGCTT | 2 cut(s) | 237, 278 |
| HpaII | CCGG | 4 cut(s) | 378, 1038, 1155, 1172 |
| HphI | GGTGA | 2 cut(s) | 461, 1106 |
| Hpy166II | GTNNAC | 4 cut(s) | 38, 315, 1114, 1143 |
| Hpy188I | TCNGA | 4 cut(s) | 107, 993, 1052, 1214 |
| Hpy188III | TCNNGA | 7 cut(s) | 12, 339, 353, 884, 897, 975, 1224 |
| Hpy8I | GTNNAC | 4 cut(s) | 38, 315, 1114, 1143 |
| Hpy99I | CGWCG | 1 cut(s) | 1180 |
| HpyAV | CCTTC | 3 cut(s) | 579, 798, 890 |
| HpyCH4III | ACNGT | 4 cut(s) | 163, 473, 1057, 1078 |
| HpyCH4IV | ACGT | 2 cut(s) | 910, 1145 |
| HpyCH4V | TGCA | 7 cut(s) | 38, 80, 400, 746, 830, 1072, 1143 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 86, 746, 755 |
| HpyF3I | CTNAG | 2 cut(s) | 345, 810 |
| HpySE526I | ACGT | 2 cut(s) | 910, 1145 |
| Hsp92II | CATG | 6 cut(s) | 67, 195, 298, 485, 558, 1104 |
| KroI | GCCGGC | 1 cut(s) | 1171 |
| KroNI | GCCGGC | 1 cut(s) | 1173 |
| Kzo9I | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| LmnI | GCTCC | 2 cut(s) | 97, 392 |
| Lsp1109I | GCAGC | 5 cut(s) | 490, 727, 730, 758, 842 |
| MaeI | CTAG | 2 cut(s) | 42, 707 |
| MaeII | ACGT | 2 cut(s) | 910, 1145 |
| MaeIII | GTNAC | 2 cut(s) | 716, 937 |
| MalI | GATC | 6 cut(s) | 154, 798, 973, 985, 1011, 1216 |
| MboI | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| MboII | GAAGA | 1 cut(s) | 576 |
| MflI | RGATCY | 2 cut(s) | 971, 1214 |
| MhlI | GDGCHC | 4 cut(s) | 40, 168, 825, 1145 |
| MlsI | TGGCCA | 1 cut(s) | 683 |
| MluCI | AATT | 6 cut(s) | 117, 204, 416, 914, 945, 958 |
| MluNI | TGGCCA | 1 cut(s) | 683 |
| MlyI | GAGTC | 4 cut(s) | 343, 719, 1036, 1106 |
| MmeI | TCCRAC | 2 cut(s) | 467, 1242 |
| Mox20I | TGGCCA | 1 cut(s) | 683 |
| MroNI | GCCGGC | 1 cut(s) | 1171 |
| MroXI | GAANNNNTTC | 1 cut(s) | 568 |
| MscI | TGGCCA | 1 cut(s) | 683 |
| MseI | TTAA | 1 cut(s) | 560 |
| MslI | CAYNNNNRTG | 2 cut(s) | 299, 486 |
| Msp20I | TGGCCA | 1 cut(s) | 683 |
| MspI | CCGG | 4 cut(s) | 378, 1038, 1155, 1172 |
| MspR9I | CCNGG | 5 cut(s) | 222, 801, 1038, 1155, 1156 |
| MvaI | CCWGG | 2 cut(s) | 222, 801 |
| MvnI | CGCG | 2 cut(s) | 244, 531 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 86, 746, 755 |
| NaeI | GCCGGC | 1 cut(s) | 1173 |
| NciI | CCSGG | 3 cut(s) | 1038, 1155, 1156 |
| NdeII | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| NgoMIV | GCCGGC | 1 cut(s) | 1171 |
| NlaIII | CATG | 6 cut(s) | 67, 195, 298, 485, 558, 1104 |
| NlaIV | GGNNCC | 2 cut(s) | 394, 441 |
| NspI | RCATGY | 2 cut(s) | 195, 485 |
| NspV | TTCGAA | 1 cut(s) | 187 |
| PaeI | GCATGC | 1 cut(s) | 485 |
| PceI | AGGCCT | 1 cut(s) | 808 |
| PciI | ACATGT | 1 cut(s) | 191 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1184 |
| PdiI | GCCGGC | 1 cut(s) | 1173 |
| PdmI | GAANNNNTTC | 1 cut(s) | 568 |
| PfeI | GAWTC | 7 cut(s) | 225, 289, 304, 994, 1041, 1087, 1252 |
| PfoI | TCCNGGA | 1 cut(s) | 799 |
| PkrI | GCNGC | 5 cut(s) | 480, 742, 745, 748, 832 |
| Ple19I | CGATCG | 1 cut(s) | 1012 |
| PleI | GAGTC | 4 cut(s) | 343, 718, 1035, 1105 |
| PmaCI | CACGTG | 1 cut(s) | 1146 |
| PmlI | CACGTG | 1 cut(s) | 1146 |
| PpsI | GAGTC | 4 cut(s) | 343, 718, 1035, 1105 |
| Ppu21I | YACGTR | 2 cut(s) | 911, 1146 |
| PscI | ACATGT | 1 cut(s) | 191 |
| Psp6I | CCWGG | 2 cut(s) | 220, 799 |
| PspCI | CACGTG | 1 cut(s) | 1146 |
| PspFI | CCCAGC | 2 cut(s) | 953, 1082 |
| PspGI | CCWGG | 2 cut(s) | 220, 799 |
| PspN4I | GGNNCC | 2 cut(s) | 394, 441 |
| PstI | CTGCAG | 2 cut(s) | 748, 832 |
| PsuI | RGATCY | 2 cut(s) | 971, 1214 |
| PvuI | CGATCG | 1 cut(s) | 1012 |
| RsaI | GTAC | 6 cut(s) | 182, 426, 470, 909, 1059, 1107 |
| RsaNI | GTAC | 6 cut(s) | 181, 425, 469, 908, 1058, 1106 |
| RseI | CAYNNNNRTG | 2 cut(s) | 299, 486 |
| SaqAI | TTAA | 1 cut(s) | 560 |
| SatI | GCNGC | 5 cut(s) | 479, 741, 744, 747, 831 |
| Sau3AI | GATC | 6 cut(s) | 152, 796, 971, 983, 1009, 1214 |
| SchI | GAGTC | 4 cut(s) | 343, 719, 1036, 1106 |
| ScrFI | CCNGG | 5 cut(s) | 222, 801, 1038, 1155, 1156 |
| SduI | GDGCHC | 4 cut(s) | 40, 168, 825, 1145 |
| SfcI | CTRYAG | 2 cut(s) | 744, 828 |
| SfuI | TTCGAA | 1 cut(s) | 187 |
| SmaI | CCCGGG | 1 cut(s) | 1156 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 299, 486 |
| SphI | GCATGC | 1 cut(s) | 485 |
| Sse9I | AATT | 6 cut(s) | 117, 204, 416, 914, 945, 958 |
| SseBI | AGGCCT | 1 cut(s) | 808 |
| SsiI | CCGC | 5 cut(s) | 244, 271, 531, 700, 859 |
| SspMI | CTAG | 2 cut(s) | 42, 707 |
| StuI | AGGCCT | 1 cut(s) | 808 |
| StyD4I | CCNGG | 5 cut(s) | 220, 799, 1036, 1153, 1154 |
| StyI | CCWWGG | 1 cut(s) | 516 |
| TaaI | ACNGT | 4 cut(s) | 163, 473, 1057, 1078 |
| TaiI | ACGT | 2 cut(s) | 913, 1148 |
| TaqI | TCGA | 5 cut(s) | 187, 898, 997, 1199, 1255 |
| TasI | AATT | 6 cut(s) | 117, 204, 416, 914, 945, 958 |
| TatI | WGTACW | 1 cut(s) | 180 |
| TfiI | GAWTC | 7 cut(s) | 225, 289, 304, 994, 1041, 1087, 1252 |
| Tru1I | TTAA | 1 cut(s) | 560 |
| Tru9I | TTAA | 1 cut(s) | 560 |
| TscAI | CASTG | 5 cut(s) | 40, 166, 441, 507, 832 |
| TseI | GCWGC | 5 cut(s) | 478, 740, 743, 746, 830 |
| TspDTI | ATGAA | 3 cut(s) | 17, 152, 281 |
| TspGWI | ACGGA | 3 cut(s) | 1131, 1137, 1193 |
| TspMI | CCCGGG | 1 cut(s) | 1154 |
| TspRI | CASTG | 5 cut(s) | 40, 166, 441, 507, 832 |
| VneI | GTGCAC | 2 cut(s) | 36, 1141 |
| XapI | RAATTY | 2 cut(s) | 416, 958 |
| XceI | RCATGY | 2 cut(s) | 195, 485 |
| XmaI | CCCGGG | 1 cut(s) | 1154 |
| XmnI | GAANNNNTTC | 1 cut(s) | 568 |
| XspI | CTAG | 2 cut(s) | 42, 707 |