Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr17

Orthogroup ID

OG0015672

Physical Location & Seq

Genomic Coordinates Forward (+)

8073541 .. 8076576

Gene Structure 3036 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD17G1095100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1389 bp

ATGGCCGGTGAGATGTATGGTGCCGGAGACCTTCTCAGGTCAATCAGTGCATCAAGTGAAGCAGACAAGCCAATGATAATTGAGCTTGCCGTTGCAGCTATGGATGAACTTATCAGAATGGCCCAAATGGTTGAACCCTTGTGGATGACTAGCCTTGATGGCAGCACCACCGTACTCAATGAAGGTGAGTACATCAGAACGTTCCCTCGTGAAGTCAGGCCAAAACAAAACGGCTTCAAAACAGAAGCTTCGCGTGAGAGTGCAGTTGTTATTATGAACCACATGAAACTTGTTGAGATTCTCATGGATGTGAATCAGTGGTCGACCGTACTTTCTGGGATTGTCTCAAGAGCTCTGACCCTTGAAGTCCTATTAACTGGCGTGGCTGGAAATTACAATGGAGCGTTGCAAGTGATGACGGCAGAATTCCAAGTTCCTTCACCACTTGTTCCAACTCGTGAGAGTTATTATGTGAGGTACTGCAAACGGCATGCCGATGGCACCTGGGCTGTGGTTGTTACATGGGTTGAGCATGCTGATGAAGTGGATGAAAGAGGTATTCACCACCTCTACAAGCAGCTGGTTAGCTCCGGCCATGCATTTGGCGCAAAACGATGGGTTGCTACCTTGGACCGTCAATGCGAACGCGAACGTCTTGCTAGTGCAATGGCTTCTAACATCCCTACTGGTGATGTTGGAGAAAGGAGAAAAAGCGTCCTGAAATGGGCTGAAAGAATGATGATTACCTTCTGTGCTGGATTGAGTGCATCGACCACACACACATGGACCACAATGTCCGGAATAGGGGTTGATGACGTCCGGGTGATGACCCGAAAATGTGTGGATGATCTCGGAAGGCCTGCAGGTATTGTGCTCAGAGCCGCGGCATCTTTCTGTCTTCCAGTACCTCCCAAAAGAGTCTTTGGGTTTCTCCGCAATGAGAAGTCTCGCAGCGAGTGGGATATTCTTTCTTATGCGGGAATTTTTAAAGAGATTGGACACATTGCTTATGGTCGCAACACTGGAAATTGCAGTGCCTATTCAAGCAAGAGCAACATGCTGATACTGCAAGAGAGCTGCACTGACCCAACAGCTTCCTTTGTAATTTATGCACCAGTTGACATTGTTCACACGAAAGCCGTGCTGAATGGGAGTGACCCTGACCATGTTCCCCTTCTTCCTTCTGGGTTTGCGATACTCCCCGACGGAGCCGGCATTGGAGACTCTTCCTCTGGTGGTAGTTCGCTTCTCACTGTTGCATTTCAGCTCTTGATTGATTCAGACCCAACTGCTAAGCTGTCTCTTGGGTCGTCAGTCACAGCGGCTAACGATCCTATTGATTGCACTGTTGAGAAGATAAAAGCTGCATTCTCATGCGACAGTGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000902 GO:0000904 GO:0003006 GO:0003674 GO:0003700 GO:0006355 GO:0007275 GO:0008150 GO:0009653 GO:0009791 GO:0009888 GO:0009889 GO:0009908 GO:0009987 GO:0010026 GO:0010090 GO:0010468 GO:0010556 GO:0016043 GO:0019219 GO:0019222 GO:0022414 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0032989 GO:0045595 GO:0045596 GO:0048367 GO:0048437 GO:0048468 GO:0048497 GO:0048519 GO:0048523 GO:0048608 GO:0048731 GO:0048856 GO:0048869 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051171 GO:0051252 GO:0060255 GO:0061458 GO:0065007 GO:0071840 GO:0080090 GO:0090558 GO:0090567 GO:0090626 GO:0090700 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Homeobox START

Protein Analysis

463

Amino Acids

50.15

Weight (kDa)

5.75

Isoelectric Point (pI)

37.67

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
START	PF01852	29 - 172	3.8e-24	START domain
START	PF01852	173 - 216	1.4e-07	START domain
PDF2_C	PF25797	234 - 459	2.5e-78	PDF2-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0015672)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g43300
malus_domestica	MD17G1095100.v1.1
rosa_chinensis	RchiOBHm_Chr3g0470751
rosa_laevigata	RLG00000024245
rosa_multiflora	Rmu_sc0002790.1_g000010 Rmu_sc0006168.1_g000005 Rmu_sc0006168.1_g000012 Rmu_sc0006168.1_g000014
rosa_roxburghii	Rroxscaffold_6G00410600
rosa_samantha	Rh3AG162000 Rh3BG186900 Rh3BG187100 Rh3CG177100 Rh3CG177300 Rh3DG188600 Rh3DG188700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	793
AatII	GACGTC	1 cut(s)	819
Acc36I	ACCTGC	1 cut(s)	854
AccB1I	GGYRCC	2 cut(s)	20, 500
AccI	GTMKAC	1 cut(s)	323
AccII	CGCG	3 cut(s)	253, 648, 884
AccIII	TCCGGA	1 cut(s)	797
AciI	CCGC	5 cut(s)	882, 884, 934, 977, 1322
AclI	AACGTT	1 cut(s)	200
AclWI	GGATC	1 cut(s)	1325
AcoI	YGGCCR	2 cut(s)	3, 592
AcsI	RAATTY	2 cut(s)	425, 981
AcyI	GRCGYC	1 cut(s)	816
AfaI	GTAC	5 cut(s)	174, 191, 330, 479, 906
AfiI	CCNNNNNNNGG	2 cut(s)	724, 804
AgsI	TTSAA	4 cut(s)	134, 238, 365, 1044
AjnI	CCWGG	1 cut(s)	503
Alw21I	GWGCWC	2 cut(s)	355, 876
Alw26I	GTCTC	5 cut(s)	21, 349, 951, 1215, 1305
AlwI	GGATC	1 cut(s)	1325
Aor13HI	TCCGGA	1 cut(s)	797
AoxI	GGCC	5 cut(s)	3, 120, 218, 592, 857
ApeKI	GCWGC	6 cut(s)	95, 162, 577, 951, 1077, 1364
ApoI	RAATTY	2 cut(s)	425, 981
AspLEI	GCGC	1 cut(s)	608
AspS9I	GGNCC	3 cut(s)	121, 631, 786
AsuC2I	CCSGG	1 cut(s)	821
AsuHPI	GGTGA	6 cut(s)	20, 197, 432, 554, 701, 835
AvaII	GGWCC	2 cut(s)	631, 786
BanI	GGYRCC	2 cut(s)	20, 500
BanII	GRGCYC	1 cut(s)	355
BauI	CACGAG	2 cut(s)	207, 456
BbsI	GAAGAC	1 cut(s)	890
Bbv12I	GWGCWC	2 cut(s)	355, 876
BbvI	GCAGC	6 cut(s)	107, 174, 589, 963, 1064, 1351
BccI	CCATC	3 cut(s)	152, 491, 609
BceAI	ACGGC	5 cut(s)	74, 247, 435, 503, 1124
BcgI	CGANNNNNNTGC	4 cut(s)	638, 672, 1123, 1157
BciT130I	CCWGG	1 cut(s)	505
BcnI	CCSGG	1 cut(s)	821
BcoDI	GTCTC	5 cut(s)	21, 349, 951, 1215, 1305
BfaI	CTAG	2 cut(s)	150, 660
BfmI	CTRYAG	1 cut(s)	861
BfuAI	ACCTGC	1 cut(s)	854
BglI	GCCNNNNNGGC	1 cut(s)	159
BisI	GCNGC	9 cut(s)	96, 163, 578, 882, 885, 952, 1078, 1323, 1365
BlpI	GCTNAGC	1 cut(s)	1293
BlsI	GCNGC	9 cut(s)	97, 164, 579, 883, 886, 953, 1079, 1324, 1366
Bme1390I	CCNGG	2 cut(s)	505, 821
Bme18I	GGWCC	2 cut(s)	631, 786
BmgT120I	GGNCC	3 cut(s)	121, 631, 786
BmiI	GGNNCC	3 cut(s)	22, 502, 1210
BmrFI	CCNGG	2 cut(s)	505, 821
BmsI	GCATC	3 cut(s)	59, 776, 896
BpiI	GAAGAC	1 cut(s)	890
BplI	GAGNNNNNCTC	2 cut(s)	18, 50
Bpu1102I	GCTNAGC	1 cut(s)	1293
BpuEI	CTTGAG	1 cut(s)	331
BpuMI	CCSGG	1 cut(s)	821
BsaBI	GATNNNNATC	1 cut(s)	312
BsaHI	GRCGYC	1 cut(s)	816
BsaI	GGTCTC	1 cut(s)	21
BsaJI	CCNNGG	3 cut(s)	504, 627, 882
BsaWI	WCCGGW	1 cut(s)	797
Bsc4I	CCNNNNNNNGG	2 cut(s)	724, 804
Bse118I	RCCGGY	2 cut(s)	5, 1211
Bse1I	ACTGG	5 cut(s)	382, 691, 902, 1027, 1115
Bse3DI	GCAATG	3 cut(s)	672, 943, 1002
Bse8I	GATNNNNATC	1 cut(s)	312
BseAI	TCCGGA	1 cut(s)	797
BseBI	CCWGG	1 cut(s)	505
BseDI	CCNNGG	3 cut(s)	504, 627, 882
BseGI	GGATG	6 cut(s)	109, 150, 313, 553, 678, 850
BseJI	GATNNNNATC	1 cut(s)	312
BseLI	CCNNNNNNNGG	2 cut(s)	724, 804
BseMI	GCAATG	3 cut(s)	672, 943, 1002
BseMII	CTCAG	2 cut(s)	49, 889
BseNI	ACTGG	5 cut(s)	382, 691, 902, 1027, 1115
BseXI	GCAGC	6 cut(s)	107, 174, 589, 963, 1064, 1351
BsgI	GTGCAG	2 cut(s)	282, 1063
Bsh1236I	CGCG	3 cut(s)	253, 648, 884
Bsh1285I	CGRYCG	1 cut(s)	327
BshFI	GGCC	5 cut(s)	5, 122, 220, 594, 859
BshNI	GGYRCC	2 cut(s)	20, 500
BsiEI	CGRYCG	1 cut(s)	327
BsiHKAI	GWGCWC	2 cut(s)	355, 876
BsiSI	CCGG	6 cut(s)	6, 24, 591, 798, 820, 1212
BslI	CCNNNNNNNGG	2 cut(s)	724, 804
BsmAI	GTCTC	5 cut(s)	21, 349, 951, 1215, 1305
BsmI	GAATGC	1 cut(s)	1367
BsnI	GGCC	5 cut(s)	5, 122, 220, 594, 859
Bso31I	GGTCTC	1 cut(s)	21
Bsp1286I	GDGCHC	2 cut(s)	355, 876
Bsp13I	TCCGGA	1 cut(s)	797
Bsp143I	GATC	2 cut(s)	847, 1330
Bsp1720I	GCTNAGC	1 cut(s)	1293
BspACI	CCGC	5 cut(s)	882, 884, 934, 977, 1322
BspANI	GGCC	5 cut(s)	5, 122, 220, 594, 859
BspCNI	CTCAG	2 cut(s)	48, 888
BspEI	TCCGGA	1 cut(s)	797
BspFNI	CGCG	3 cut(s)	253, 648, 884
BspLI	GGNNCC	3 cut(s)	22, 502, 1210
BspMAI	CTGCAG	1 cut(s)	865
BspMI	ACCTGC	1 cut(s)	854
BspPI	GGATC	1 cut(s)	1325
BspT107I	GGYRCC	2 cut(s)	20, 500
BspTNI	GGTCTC	1 cut(s)	21
BsrDI	GCAATG	3 cut(s)	672, 943, 1002
BsrFI	RCCGGY	2 cut(s)	5, 1211
BsrI	ACTGG	5 cut(s)	382, 691, 902, 1027, 1115
BssAI	RCCGGY	2 cut(s)	5, 1211
BssECI	CCNNGG	3 cut(s)	504, 627, 882
BssMI	GATC	2 cut(s)	847, 1330
BssNI	GRCGYC	1 cut(s)	816
BssSI	CACGAG	2 cut(s)	207, 456
BssT1I	CCWWGG	1 cut(s)	627
Bst2BI	CACGAG	2 cut(s)	207, 456
Bst2UI	CCWGG	1 cut(s)	505
Bst4CI	ACNGT	6 cut(s)	172, 328, 635, 1255, 1348, 1382
Bst6I	CTCTTC	1 cut(s)	1231
BstACI	GRCGYC	1 cut(s)	816
BstC8I	GCNNGC	5 cut(s)	87, 492, 534, 861, 1213
BstDEI	CTNAG	3 cut(s)	35, 875, 1293
BstDSI	CCRYGG	1 cut(s)	882
BstF5I	GGATG	6 cut(s)	109, 150, 313, 553, 678, 850
BstFNI	CGCG	3 cut(s)	253, 648, 884
BstHHI	GCGC	1 cut(s)	608
BstKTI	GATC	2 cut(s)	850, 1333
BstMAI	GTCTC	5 cut(s)	21, 349, 951, 1215, 1305
BstMBI	GATC	2 cut(s)	847, 1330
BstMCI	CGRYCG	1 cut(s)	327
BstMWI	GCNNNNNNNGC	4 cut(s)	95, 159, 605, 1066
BstNI	CCWGG	1 cut(s)	505
BstNSI	RCATGY	3 cut(s)	494, 536, 1060
BstSCI	CCNGG	2 cut(s)	503, 819
BstSFI	CTRYAG	1 cut(s)	861
BstUI	CGCG	3 cut(s)	253, 648, 884
BstV1I	GCAGC	6 cut(s)	107, 174, 589, 963, 1064, 1351
BstV2I	GAAGAC	1 cut(s)	890
BstXI	CCANNNNNNTGG	1 cut(s)	602
BsuRI	GGCC	5 cut(s)	5, 122, 220, 594, 859
BtgI	CCRYGG	1 cut(s)	882
BtsCI	GGATG	6 cut(s)	109, 150, 313, 553, 678, 850
BtsI	GCAGTG	1 cut(s)	1039
BtsIMutI	CAGTG	8 cut(s)	52, 323, 1020, 1039, 1080, 1251, 1344, 1387
BveI	ACCTGC	1 cut(s)	854
Cac8I	GCNNGC	5 cut(s)	87, 492, 534, 861, 1213
CfoI	GCGC	1 cut(s)	608
Cfr10I	RCCGGY	2 cut(s)	5, 1211
Cfr13I	GGNCC	3 cut(s)	121, 631, 786
Cfr42I	CCGCGG	1 cut(s)	885
CseI	GACGC	1 cut(s)	703
Csp6I	GTAC	5 cut(s)	173, 190, 329, 478, 905
CviQI	GTAC	5 cut(s)	173, 190, 329, 478, 905
DdeI	CTNAG	3 cut(s)	35, 875, 1293
DpnI	GATC	2 cut(s)	849, 1332
DpnII	GATC	2 cut(s)	847, 1330
DraI	TTTAAA	1 cut(s)	988
DrdI	GACNNNNNNGTC	1 cut(s)	793
DseDI	GACNNNNNNGTC	1 cut(s)	793
EaeI	YGGCCR	2 cut(s)	3, 592
Eam1104I	CTCTTC	1 cut(s)	1231
EarI	CTCTTC	1 cut(s)	1231
Ecl136II	GAGCTC	1 cut(s)	353
Eco130I	CCWWGG	1 cut(s)	627
Eco147I	AGGCCT	1 cut(s)	859
Eco24I	GRGCYC	1 cut(s)	355
Eco31I	GGTCTC	1 cut(s)	21
Eco47I	GGWCC	2 cut(s)	631, 786
Eco53kI	GAGCTC	1 cut(s)	353
EcoICRI	GAGCTC	1 cut(s)	353
EcoRI	GAATTC	1 cut(s)	425
EcoRII	CCWGG	1 cut(s)	503
EcoT14I	CCWWGG	1 cut(s)	627
EcoT22I	ATGCAT	1 cut(s)	601
EcoT38I	GRGCYC	1 cut(s)	355
ErhI	CCWWGG	1 cut(s)	627
FauI	CCCGC	1 cut(s)	970
FblI	GTMKAC	1 cut(s)	323
Fnu4HI	GCNGC	9 cut(s)	96, 163, 578, 882, 885, 952, 1078, 1323, 1365
FokI	GGATG	6 cut(s)	116, 157, 320, 560, 665, 857
FriOI	GRGCYC	1 cut(s)	355
Fsp4HI	GCNGC	9 cut(s)	96, 163, 578, 882, 885, 952, 1078, 1323, 1365
FspBI	CTAG	2 cut(s)	150, 660
GlaI	GCGC	1 cut(s)	607
GluI	GCNGC	9 cut(s)	96, 163, 578, 882, 885, 952, 1078, 1323, 1365
HaeIII	GGCC	5 cut(s)	5, 122, 220, 594, 859
HapII	CCGG	6 cut(s)	6, 24, 591, 798, 820, 1212
HgaI	GACGC	1 cut(s)	703
HhaI	GCGC	1 cut(s)	608
Hin1I	GRCGYC	1 cut(s)	816
Hin6I	GCGC	1 cut(s)	606
HinP1I	GCGC	1 cut(s)	606
HincII	GTYRAC	2 cut(s)	324, 1120
HindII	GTYRAC	2 cut(s)	324, 1120
HindIII	AAGCTT	1 cut(s)	246
HinfI	GANTC	5 cut(s)	298, 313, 918, 1223, 1277
HpaII	CCGG	6 cut(s)	6, 24, 591, 798, 820, 1212
HphI	GGTGA	6 cut(s)	20, 197, 432, 554, 701, 835
Hpy166II	GTNNAC	3 cut(s)	324, 1120, 1129
Hpy188I	TCNGA	6 cut(s)	116, 197, 357, 854, 878, 1282
Hpy188III	TCNNGA	6 cut(s)	209, 348, 458, 718, 798, 1270
Hpy8I	GTNNAC	3 cut(s)	324, 1120, 1129
Hpy99I	CGWCG	1 cut(s)	1208
HpyAV	CCTTC	7 cut(s)	41, 176, 447, 757, 849, 1184, 1191
HpyCH4III	ACNGT	6 cut(s)	172, 328, 635, 1255, 1348, 1382
HpyCH4IV	ACGT	3 cut(s)	200, 652, 816
HpyF10VI	GCNNNNNNNGC	4 cut(s)	95, 159, 605, 1066
HpyF3I	CTNAG	3 cut(s)	35, 875, 1293
HpySE526I	ACGT	3 cut(s)	200, 652, 816
Hsp92I	GRCGYC	1 cut(s)	816
HspAI	GCGC	1 cut(s)	606
Kpn2I	TCCGGA	1 cut(s)	797
KroI	GCCGGC	1 cut(s)	1211
KroNI	GCCGGC	1 cut(s)	1213
KspI	CCGCGG	1 cut(s)	885
Kzo9I	GATC	2 cut(s)	847, 1330
LmnI	GCTCC	3 cut(s)	401, 593, 1208
Lsp1109I	GCAGC	6 cut(s)	107, 174, 589, 963, 1064, 1351
LweI	GCATC	3 cut(s)	59, 776, 896
MaeI	CTAG	2 cut(s)	150, 660
MaeII	ACGT	3 cut(s)	200, 652, 816
MaeIII	GTNAC	3 cut(s)	517, 1154, 1315
MalI	GATC	2 cut(s)	849, 1332
MboI	GATC	2 cut(s)	847, 1330
MboII	GAAGA	4 cut(s)	890, 1169, 1218, 1366
MhlI	GDGCHC	2 cut(s)	355, 876
MluCI	AATT	6 cut(s)	78, 391, 425, 981, 1027, 1104
MlyI	GAGTC	2 cut(s)	927, 1217
MmeI	TCCRAC	2 cut(s)	476, 676
MnlI	CCTC	6 cut(s)	216, 468, 548, 578, 918, 1240
Mph1103I	ATGCAT	1 cut(s)	601
MroI	TCCGGA	1 cut(s)	797
MroNI	GCCGGC	1 cut(s)	1211
MseI	TTAA	2 cut(s)	374, 987
MslI	CAYNNNNRTG	5 cut(s)	308, 495, 537, 781, 1372
MspA1I	CMGCKG	3 cut(s)	580, 884, 1322
MspI	CCGG	6 cut(s)	6, 24, 591, 798, 820, 1212
MspR9I	CCNGG	2 cut(s)	505, 821
Mva1269I	GAATGC	1 cut(s)	1367
MvaI	CCWGG	1 cut(s)	505
MvnI	CGCG	3 cut(s)	253, 648, 884
MwoI	GCNNNNNNNGC	4 cut(s)	95, 159, 605, 1066
NaeI	GCCGGC	1 cut(s)	1213
NciI	CCSGG	1 cut(s)	821
NdeII	GATC	2 cut(s)	847, 1330
NgoMIV	GCCGGC	1 cut(s)	1211
NlaIV	GGNNCC	3 cut(s)	22, 502, 1210
NmuCI	GTSAC	2 cut(s)	1154, 1315
NsiI	ATGCAT	1 cut(s)	601
NspI	RCATGY	3 cut(s)	494, 536, 1060
PaeI	GCATGC	2 cut(s)	494, 536
PceI	AGGCCT	1 cut(s)	859
PctI	GAATGC	1 cut(s)	1367
PdiI	GCCGGC	1 cut(s)	1213
PfeI	GAWTC	3 cut(s)	298, 313, 1277
PkrI	GCNGC	9 cut(s)	97, 164, 579, 883, 886, 953, 1079, 1324, 1366
PleI	GAGTC	2 cut(s)	926, 1217
PpsI	GAGTC	2 cut(s)	926, 1217
Psp124BI	GAGCTC	1 cut(s)	355
Psp1406I	AACGTT	1 cut(s)	200
Psp6I	CCWGG	1 cut(s)	503
PspGI	CCWGG	1 cut(s)	503
PspN4I	GGNNCC	3 cut(s)	22, 502, 1210
PspPI	GGNCC	3 cut(s)	121, 631, 786
PstI	CTGCAG	1 cut(s)	865
PvuII	CAGCTG	1 cut(s)	580
RsaI	GTAC	5 cut(s)	174, 191, 330, 479, 906
RsaNI	GTAC	5 cut(s)	173, 190, 329, 478, 905
RseI	CAYNNNNRTG	5 cut(s)	308, 495, 537, 781, 1372
SacI	GAGCTC	1 cut(s)	355
SacII	CCGCGG	1 cut(s)	885
SalI	GTCGAC	1 cut(s)	322
SaqAI	TTAA	2 cut(s)	374, 987
SatI	GCNGC	9 cut(s)	96, 163, 578, 882, 885, 952, 1078, 1323, 1365
Sau3AI	GATC	2 cut(s)	847, 1330
Sau96I	GGNCC	3 cut(s)	121, 631, 786
SbfI	CCTGCAGG	1 cut(s)	865
SchI	GAGTC	2 cut(s)	927, 1217
ScrFI	CCNGG	2 cut(s)	505, 821
SdaI	CCTGCAGG	1 cut(s)	865
SduI	GDGCHC	2 cut(s)	355, 876
SfaNI	GCATC	3 cut(s)	59, 776, 896
SfcI	CTRYAG	1 cut(s)	861
Sfr303I	CCGCGG	1 cut(s)	885
SgrBI	CCGCGG	1 cut(s)	885
SinI	GGWCC	2 cut(s)	631, 786
SmiMI	CAYNNNNRTG	5 cut(s)	308, 495, 537, 781, 1372
SmlI	CTYRAG	1 cut(s)	346
SmoI	CTYRAG	1 cut(s)	346
SphI	GCATGC	2 cut(s)	494, 536
Sse8387I	CCTGCAGG	1 cut(s)	865
Sse9I	AATT	6 cut(s)	78, 391, 425, 981, 1027, 1104
SseBI	AGGCCT	1 cut(s)	859
SsiI	CCGC	5 cut(s)	882, 884, 934, 977, 1322
SspMI	CTAG	2 cut(s)	150, 660
SstI	GAGCTC	1 cut(s)	355
StuI	AGGCCT	1 cut(s)	859
StyD4I	CCNGG	2 cut(s)	503, 819
StyI	CCWWGG	1 cut(s)	627
TaaI	ACNGT	6 cut(s)	172, 328, 635, 1255, 1348, 1382
TaiI	ACGT	3 cut(s)	203, 655, 819
TaqI	TCGA	2 cut(s)	323, 770
TasI	AATT	6 cut(s)	78, 391, 425, 981, 1027, 1104
TatI	WGTACW	1 cut(s)	189
TauI	GCSGC	3 cut(s)	884, 887, 1325
TfiI	GAWTC	3 cut(s)	298, 313, 1277
Tru1I	TTAA	2 cut(s)	374, 987
Tru9I	TTAA	2 cut(s)	374, 987
TscAI	CASTG	8 cut(s)	52, 323, 1027, 1039, 1087, 1258, 1351, 1387
TseFI	GTSAC	2 cut(s)	1154, 1315
TseI	GCWGC	6 cut(s)	95, 162, 577, 951, 1077, 1364
Tsp45I	GTSAC	2 cut(s)	1154, 1315
TspDTI	ATGAA	6 cut(s)	120, 195, 290, 299, 555, 564
TspGWI	ACGGA	1 cut(s)	1221
TspRI	CASTG	8 cut(s)	52, 323, 1027, 1039, 1087, 1258, 1351, 1387
VpaK11BI	GGWCC	2 cut(s)	631, 786
XapI	RAATTY	2 cut(s)	425, 981
XceI	RCATGY	3 cut(s)	494, 536, 1060
XmiI	GTMKAC	1 cut(s)	323
XspI	CTAG	2 cut(s)	150, 660
ZraI	GACGTC	1 cut(s)	817
Zsp2I	ATGCAT	1 cut(s)	601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.