FvH4_6g44320

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0014776
Physical Location & Seq
Forward (+)
34146019 .. 34151023
5005 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g44320.t1

Sequence Viewer

Length: 2970 bp
ATGAGCCAAAGATTTGGGAATTCTGAACCCAATTTCGTGTCTTTAATCACCAAGTTTCGTGATGGAGATATGAACATTAGATGGGTAGAAAAGTTATCTAAGAACGGTGCTAGAGTAGCCCCTCCATCTGCATCAGATGGGTATTGGAATTTGGGACCCGAGCCTTTAGCTTTAAGGACTGGCTTTCGTGACGGAAGTTTTGATGAGAAAAGCAAGAAGGGGGTGGGAAAGTCGTCTAAGAGCAGTGCTAGTGTAGCCTCTTCATCTGCATCACATGAGCATCGGAATTCTGAACCTCATCCTCTGTCTTTGAGGTCTGGGTCTCCTGATGGAAGTACTGCTGAGAAAAAGAAGAAGAAGAAGAAGATGAAGAAGAGGGCAGGAAAGACATCTCAGAGCGGTGGTACTGTAGCCTCTCCATCTGTATCAGATGCGAATGAGGTTTCCAAAGATTCAACTGTCCAAATTTCAGAGAAACTCTCGTTTCCTGATCATACCCGGAACAGCTTATCAGTTGGAACGCAGAGTTCTGATGACTGTTCAAAGATAAGCAAACAAGGGTCTGCTGAATCAAGAAGTACTACTGTTGTTGAGGAGGTTGTAGTTCAATGTAGCAAACAGGTTGAACTTGAAGATTCCAAGAATAGAAGCCACACAGGTTGGACTCACAATGGAAAAGAAAATAGGCATTTTGGTTGGAACAGGAGGCAGTACAATGCTAGGGAAGGACATGTGAATTGGGAGAAGAAACCGAGTTACAGAAATGGTGTGAAAGATATTAACTCGGCAGAGAATCGGTTTTGGGCTGACCGTAGTTCATTAGCCAATGATGCTATCATACGTTCTTCATTGATTTCCTCTGGATACAGCAATGGGAAAGAAAATAGGCATTTTGGTTGGAACAGGAAGCAGTACAATGCTAGGGAAGGACATGTGGATTGGGGGAAAAAACCAAGCTATGGTGTGAAAGATGTTAACCTGGCAGATAATCATTTTTGGTCTGAGCGGAATTCATTAGCCACTGATGCCATCTCACCTACTCCGTCGAATTCCTCTAGACAGAATAATGCTGCTTATGGATATAGAAAAAAGGATGTCCCTCCAATACTATTGAATGATTCATCACAGGCAGCTGCTTCTCCAAAGAGGTTGAATGGGACACTTTTTGTTTCACTAAAAAGTCAAACAGAAGGCTTGGGGAATACAGAAGGCTTGGGGAATGACTCTGAAAAGTTAGTAGGAAGATCAACTTATTTGTTTAAGCCTGTGCATTGCAATGTGAAAAAGATACCTCGCAATTATGAAGCAAACTTCTTTGAGTTACATGCTAAGTGTGTTTCATATCATAAAGAATTGTCACTGGGTTTTTCTGATATGCACGATTACAAGAGAGATACTGCAGGAACAAATGGCAAGCAGATTGCAAGTCATGGTGATCGACACTGTTTAAACTCACCTTCTATGTATTCTAAAATGTCTACTCAGGGAGTGATGAATGATATCCAGCAATACAAATTCAGGAAGATTCCAAGCATGGAATATGAGGTCGGCAAGTCAGTGCATGCATCTGTGGATGGTATACCATGCTGCCATACTGATCATAAACTTGAGAAAGATGCTTCTGGAGCAAATGTTATGGAGCGGACAGCTGTTGGTACAAAAGAGTTCAGGCCTGTGGACAGAATTTCATCTGCTACTATTTCAAATGAGTTAAATCTCTTACCAGATGTAAGCCGGCAGTTAAATAATAGCCATCTGGGAGGAACCAGAATACCCTGCCATCAACCAATTTCTTATGATGATCCCAAGATTTATCGGTCTGCTGCTGAACTAGGTCAAAAGACTGAAATAAAAAGTTATGATGCAAAGCATAGAGGACCAGAAGACACTGACCGGTTCTTAATTGGTTCACATATGGGAATGAAAGCTCTAACTGCTGCTTACCAAATGCAATTAGCATCTGAAACTGTTCAGCTCGCAATGGGTTGTCCACTTGCAGAGTTTGAAACGTTCATCCACTGCGCTGCTCCTGTTATTCCTTCTTCGTATGTACATAACGAATATTCTGTTTCCTTGGGTACCCAGCCATCTGATAGTTTACTAGGCAAGGACCAGATACCAAATGTATCACTTCACAGTGTTTGGAACTGGTATGAGATACCAGGGAATTACGGGTTGGATGTCAAGGCAGTTTGTCCTAAAACCCTCACTGGGCTTCCAAATGATTCAATGTCTTTCCAAGCCTATTTTGTTCCTTCCCTTTCTGCTATTCAGTTGTTTGGACCACACATCTCTGGTTGCAAAAGATTATTTTCCAATTCTACTGCTTCTGAACAACACAACCATGTTCGGGTTGGTTCATTTGATGTTGCCCTACCTGACAGAAGTTGTGTTCAAGGTCTAGATCGTTCACATGTCTTCTCCTCTGATGCTGAGCTCATATTTGAGTTTTTTGAGGTTGAGTTGCCACACTACAGGAGGCCTTTTTATAACAAAATTCTGGAGTTAATTGGTGCTGGAACTTCTAATCCTCTCGTATATGGTGACCCATCAAAGCTTGCTAGTCTGAATTTGCGTGATTTACACCCTGCCTCTTGGTTTTCGGTGGCCTGGTATCCTATATATCAAATTCCAGAAGGGCATCTCCGTGCATCATTCTTGACTTACCATTCACTTGGACATTTTGTGCAAGGACCTGGTTCCACTGTTGCTCCAGGTTGCATTGTCTTCCCTGTGTTAGGCTTGCAAAGCTACAATTCACAGGATGAATGCTGGTTTGAACCCAAAATACCTTCTTCAGGAGAACCTGCATCTTTTGACACCACAGGAATTCTCATAAAAAGGCTGAAGACGTTGGACGAAAATGCCTTGCATTTTGCTAGAGGCTGGGTTTACAAGGATAAGGTCAAGGTGCAGAACAAACATCCAGATTACGAGTTCTTCACTTCTCGAAAAACACGTTACACATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

990

Amino Acids

109.9

Weight (kDa)

9.0

Isoelectric Point (pI)

40.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 666 - 981 1.9e-57 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014776)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44320
malus_domestica MD17G1087100.v1.1
prunus_persica Prupe.3G227600_v2.0.a1 Prupe.3G227600_v2.0.a1
pyrus_communis pycom09g02250 pycom17g08430
rosa_chinensis RchiOBHm_Chr2g0161201
rosa_laevigata RLG00000021267
rosa_multiflora Rmu_sc0006420.1_g000047
rosa_roxburghii Rroxscaffold_2G00089030
rosa_rugosa Rorug02G0487000 Rorug02G0487100
rosa_samantha Rh2AG553800 Rh2BG567300 Rh2CG537600 Rh2DG576700
rosa_wichuraiana Rw2G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2490
Acc36I ACCTGC 1 cut(s) 2815
Acc65I GGTACC 1 cut(s) 2078
AccB1I GGYRCC 1 cut(s) 2078
AccB7I CCANNNNNTGG 1 cut(s) 959
AccBSI CCGCTC 3 cut(s) 399, 1006, 1642
AccI GTMKAC 2 cut(s) 1478, 1579
AciI CCGC 3 cut(s) 399, 1006, 1642
AclI AACGTT 1 cut(s) 2009
AclWI GGATC 1 cut(s) 1796
AcuI CTGAAG 2 cut(s) 2781, 2867
AfaI GTAC 8 cut(s) 337, 406, 580, 713, 914, 1657, 2052, 2080
AfiI CCNNNNNNNGG 5 cut(s) 959, 2211, 2350, 2738, 2798
AflIII ACRYGT 4 cut(s) 730, 931, 2413, 2957
AgeI ACCGGT 1 cut(s) 1893
AjnI CCWGG 5 cut(s) 978, 2161, 2609, 2695, 2713
AjuI GAANNNNNNNTTGG 2 cut(s) 2159, 2191
AloI GAACNNNNNNTCC 2 cut(s) 2512, 2544
Alw21I GWGCWC 1 cut(s) 2439
Alw26I GTCTC 1 cut(s) 327
AlwI GGATC 1 cut(s) 1796
Ama87I CYCGRG 1 cut(s) 158
AoxI GGCC 3 cut(s) 1670, 2480, 2607
ApeKI GCWGC 7 cut(s) 1070, 1130, 1133, 1587, 1823, 1937, 2024
ArsI GACNNNNNNTTYG 2 cut(s) 182, 214
AsiGI ACCGGT 1 cut(s) 1893
Asp700I GAANNNNTTC 1 cut(s) 1968
Asp718I GGTACC 1 cut(s) 2078
AspLEI GCGC 1 cut(s) 2024
AspS9I GGNCC 5 cut(s) 155, 1877, 2110, 2282, 2693
AsuC2I CCSGG 1 cut(s) 499
AsuHPI GGTGA 5 cut(s) 40, 1026, 1445, 1446, 2555
AvaI CYCGRG 1 cut(s) 158
AvaII GGWCC 5 cut(s) 155, 1877, 2110, 2282, 2693
BanI GGYRCC 1 cut(s) 2078
BanII GRGCYC 1 cut(s) 2439
BbsI GAAGAC 4 cut(s) 1890, 2410, 2719, 2855
Bbv12I GWGCWC 1 cut(s) 2439
BbvI GCAGC 7 cut(s) 1057, 1120, 1142, 1574, 1810, 1924, 2011
BciT130I CCWGG 5 cut(s) 980, 2163, 2611, 2697, 2715
BciVI GTATCC 2 cut(s) 857, 2625
BclI TGATCA 2 cut(s) 490, 1597
BcnI CCSGG 1 cut(s) 499
BcoDI GTCTC 1 cut(s) 327
BfmI CTRYAG 3 cut(s) 408, 1398, 2473
BfuAI ACCTGC 1 cut(s) 2815
BfuI GTATCC 2 cut(s) 857, 2625
BisI GCNGC 7 cut(s) 1071, 1131, 1134, 1588, 1824, 1938, 2025
BlpI GCTNAGC 1 cut(s) 2433
BlsI GCNGC 7 cut(s) 1072, 1132, 1135, 1589, 1825, 1939, 2026
BmcAI AGTACT 2 cut(s) 337, 580
Bme1390I CCNGG 6 cut(s) 499, 980, 2163, 2611, 2697, 2715
Bme18I GGWCC 5 cut(s) 155, 1877, 2110, 2282, 2693
BmeT110I CYCGRG 1 cut(s) 158
BmgT120I GGNCC 5 cut(s) 155, 1877, 2110, 2282, 2693
BmiI GGNNCC 5 cut(s) 156, 157, 1765, 2080, 2701
BmrFI CCNGG 6 cut(s) 499, 980, 2163, 2611, 2697, 2715
BmrI ACTGGG 2 cut(s) 1370, 2220
BmuI ACTGGG 2 cut(s) 1370, 2220
BpiI GAAGAC 4 cut(s) 1890, 2410, 2719, 2855
BplI GAGNNNNNCTC 2 cut(s) 464, 496
BpmI CTGGAG 3 cut(s) 1644, 2522, 2697
Bpu1102I GCTNAGC 1 cut(s) 2433
BpuEI CTTGAG 1 cut(s) 1628
BpuMI CCSGG 1 cut(s) 499
BsaI GGTCTC 1 cut(s) 327
BsaJI CCNNGG 2 cut(s) 2073, 2162
BsaWI WCCGGW 1 cut(s) 1893
BsaXI ACNNNNNCTCC 4 cut(s) 1617, 1647, 2695, 2725
Bsc4I CCNNNNNNNGG 5 cut(s) 959, 2211, 2350, 2738, 2798
Bse118I RCCGGY 2 cut(s) 1734, 1893
Bse1I ACTGG 4 cut(s) 184, 1365, 2153, 2215
Bse3DI GCAATG 4 cut(s) 877, 1270, 1282, 1986
BseBI CCWGG 5 cut(s) 980, 2163, 2611, 2697, 2715
BseDI CCNNGG 2 cut(s) 2073, 2162
BseGI GGATG 7 cut(s) 298, 1099, 1579, 2013, 2185, 2770, 2923
BseLI CCNNNNNNNGG 5 cut(s) 959, 2211, 2350, 2738, 2798
BseMI GCAATG 4 cut(s) 877, 1270, 1282, 1986
BseMII CTCAG 5 cut(s) 333, 407, 993, 1496, 2424
BseNI ACTGG 4 cut(s) 184, 1365, 2153, 2215
BseRI GAGGAG 2 cut(s) 608, 2413
BseXI GCAGC 7 cut(s) 1057, 1120, 1142, 1574, 1810, 1924, 2011
BseYI CCCAGC 2 cut(s) 2082, 2886
BsgI GTGCAG 1 cut(s) 2933
BshFI GGCC 3 cut(s) 1672, 2482, 2609
BshNI GGYRCC 1 cut(s) 2078
BshTI ACCGGT 1 cut(s) 1893
BsiHKAI GWGCWC 1 cut(s) 2439
BsiHKCI CYCGRG 1 cut(s) 158
BsiSI CCGG 3 cut(s) 499, 1735, 1894
BslFI GGGAC 3 cut(s) 168, 1082, 1171
BslI CCNNNNNNNGG 5 cut(s) 959, 2211, 2350, 2738, 2798
BsmAI GTCTC 1 cut(s) 327
BsmFI GGGAC 3 cut(s) 168, 1082, 1171
BsmI GAATGC 1 cut(s) 2774
BsnI GGCC 3 cut(s) 1672, 2482, 2609
Bso31I GGTCTC 1 cut(s) 327
BsoBI CYCGRG 1 cut(s) 158
Bsp1286I GDGCHC 1 cut(s) 2439
Bsp1407I TGTACA 1 cut(s) 2050
Bsp143I GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
Bsp1720I GCTNAGC 1 cut(s) 2433
BspACI CCGC 3 cut(s) 399, 1006, 1642
BspANI GGCC 3 cut(s) 1672, 2482, 2609
BspCNI CTCAG 5 cut(s) 334, 406, 994, 1495, 2425
BspLI GGNNCC 5 cut(s) 156, 157, 1765, 2080, 2701
BspMAI CTGCAG 1 cut(s) 1402
BspMI ACCTGC 1 cut(s) 2815
BspPI GGATC 1 cut(s) 1796
BspT107I GGYRCC 1 cut(s) 2078
BspTNI GGTCTC 1 cut(s) 327
BsrBI CCGCTC 3 cut(s) 399, 1006, 1642
BsrDI GCAATG 4 cut(s) 877, 1270, 1282, 1986
BsrFI RCCGGY 2 cut(s) 1734, 1893
BsrGI TGTACA 1 cut(s) 2050
BsrI ACTGG 4 cut(s) 184, 1365, 2153, 2215
BssAI RCCGGY 2 cut(s) 1734, 1893
BssECI CCNNGG 2 cut(s) 2073, 2162
BssMI GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
BssNAI GTATAC 1 cut(s) 1580
BssT1I CCWWGG 1 cut(s) 2073
Bst1107I GTATAC 1 cut(s) 1580
Bst2UI CCWGG 5 cut(s) 980, 2163, 2611, 2697, 2715
Bst6I CTCTTC 2 cut(s) 265, 368
BstAUI TGTACA 1 cut(s) 2050
BstC8I GCNNGC 6 cut(s) 1415, 1563, 1736, 1977, 2559, 2744
BstDEI CTNAG 8 cut(s) 99, 237, 342, 393, 1002, 1329, 1482, 2433
BstEII GGTNACC 1 cut(s) 2543
BstENI CCTNNNNNAGG 2 cut(s) 2736, 2796
BstF5I GGATG 7 cut(s) 298, 1099, 1579, 2013, 2185, 2770, 2923
BstHHI GCGC 1 cut(s) 2024
BstKTI GATC 6 cut(s) 493, 1247, 1438, 1600, 1804, 2407
BstMAI GTCTC 1 cut(s) 327
BstMBI GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
BstMWI GCNNNNNNNGC 7 cut(s) 116, 254, 830, 1025, 1625, 1934, 2748
BstNI CCWGG 5 cut(s) 980, 2163, 2611, 2697, 2715
BstNSI RCATGY 5 cut(s) 734, 935, 1328, 1565, 2417
BstPI GGTNACC 1 cut(s) 2543
BstSCI CCNGG 6 cut(s) 497, 978, 2161, 2609, 2695, 2713
BstSFI CTRYAG 3 cut(s) 408, 1398, 2473
BstV1I GCAGC 7 cut(s) 1057, 1120, 1142, 1574, 1810, 1924, 2011
BstV2I GAAGAC 4 cut(s) 1890, 2410, 2719, 2855
BstXI CCANNNNNNTGG 2 cut(s) 14, 2675
BstZ17I GTATAC 1 cut(s) 1580
BsuI GTATCC 2 cut(s) 857, 2625
BsuRI GGCC 3 cut(s) 1672, 2482, 2609
BtsCI GGATG 7 cut(s) 298, 1099, 1579, 2013, 2185, 2770, 2923
BtsI GCAGTG 2 cut(s) 250, 2017
BveI ACCTGC 1 cut(s) 2815
Cac8I GCNNGC 6 cut(s) 1415, 1563, 1736, 1977, 2559, 2744
CfoI GCGC 1 cut(s) 2024
Cfr10I RCCGGY 2 cut(s) 1734, 1893
Cfr13I GGNCC 5 cut(s) 155, 1877, 2110, 2282, 2693
CsiI ACCWGGT 1 cut(s) 2695
Csp6I GTAC 8 cut(s) 336, 405, 579, 712, 913, 1656, 2051, 2079
CspAI ACCGGT 1 cut(s) 1893
CspCI CAANNNNNGTGG 2 cut(s) 641, 676
CviQI GTAC 8 cut(s) 336, 405, 579, 712, 913, 1656, 2051, 2079
DdeI CTNAG 8 cut(s) 99, 237, 342, 393, 1002, 1329, 1482, 2433
DpnI GATC 6 cut(s) 492, 1246, 1437, 1599, 1803, 2406
DpnII GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
DraI TTTAAA 1 cut(s) 1449
Eam1104I CTCTTC 2 cut(s) 265, 368
EarI CTCTTC 2 cut(s) 265, 368
Ecl136II GAGCTC 1 cut(s) 2437
Eco130I CCWWGG 1 cut(s) 2073
Eco147I AGGCCT 2 cut(s) 1672, 2482
Eco24I GRGCYC 1 cut(s) 2439
Eco31I GGTCTC 1 cut(s) 327
Eco32I GATATC 1 cut(s) 1501
Eco47I GGWCC 5 cut(s) 155, 1877, 2110, 2282, 2693
Eco53kI GAGCTC 1 cut(s) 2437
Eco57I CTGAAG 2 cut(s) 2781, 2867
Eco88I CYCGRG 1 cut(s) 158
Eco91I GGTNACC 1 cut(s) 2543
EcoICRI GAGCTC 1 cut(s) 2437
EcoNI CCTNNNNNAGG 2 cut(s) 2736, 2796
EcoO109I RGGNCCY 2 cut(s) 155, 2693
EcoO65I GGTNACC 1 cut(s) 2543
EcoRI GAATTC 5 cut(s) 19, 286, 1009, 1048, 2829
EcoRII CCWGG 5 cut(s) 978, 2161, 2609, 2695, 2713
EcoRV GATATC 1 cut(s) 1501
EcoT14I CCWWGG 1 cut(s) 2073
EcoT22I ATGCAT 1 cut(s) 1567
EcoT38I GRGCYC 1 cut(s) 2439
ErhI CCWWGG 1 cut(s) 2073
FalI AAGNNNNNCTT 2 cut(s) 1234, 1266
FaqI GGGAC 3 cut(s) 168, 1082, 1171
FauNDI CATATG 1 cut(s) 1914
FbaI TGATCA 2 cut(s) 490, 1597
FblI GTMKAC 2 cut(s) 1478, 1579
Fnu4HI GCNGC 7 cut(s) 1071, 1131, 1134, 1588, 1824, 1938, 2025
FokI GGATG 7 cut(s) 285, 1106, 1586, 2000, 2192, 2777, 2910
FriOI GRGCYC 1 cut(s) 2439
Fsp4HI GCNGC 7 cut(s) 1071, 1131, 1134, 1588, 1824, 1938, 2025
GlaI GCGC 1 cut(s) 2023
GluI GCNGC 7 cut(s) 1071, 1131, 1134, 1588, 1824, 1938, 2025
GsaI CCCAGC 2 cut(s) 2086, 2890
GsuI CTGGAG 3 cut(s) 1644, 2522, 2697
HaeIII GGCC 3 cut(s) 1672, 2482, 2609
HapII CCGG 3 cut(s) 499, 1735, 1894
HhaI GCGC 1 cut(s) 2024
Hin6I GCGC 1 cut(s) 2022
HinP1I GCGC 1 cut(s) 2022
HincII GTYRAC 1 cut(s) 976
HindII GTYRAC 1 cut(s) 976
HindIII AAGCTT 1 cut(s) 2555
HinfI GANTC 9 cut(s) 452, 569, 635, 664, 793, 1118, 1223, 1525, 2225
HpaI GTTAAC 1 cut(s) 976
HpaII CCGG 3 cut(s) 499, 1735, 1894
HphI GGTGA 5 cut(s) 40, 1026, 1445, 1446, 2555
Hpy166II GTNNAC 9 cut(s) 976, 1479, 1580, 1678, 1910, 1991, 2099, 2411, 2893
Hpy8I GTNNAC 9 cut(s) 976, 1479, 1580, 1678, 1910, 1991, 2099, 2411, 2893
Hpy99I CGWCG 1 cut(s) 1048
HpyCH4IV ACGT 4 cut(s) 841, 2009, 2852, 2959
HpyF10VI GCNNNNNNNGC 7 cut(s) 116, 254, 830, 1025, 1625, 1934, 2748
HpyF3I CTNAG 8 cut(s) 99, 237, 342, 393, 1002, 1329, 1482, 2433
HpySE526I ACGT 4 cut(s) 841, 2009, 2852, 2959
HspAI GCGC 1 cut(s) 2022
KflI GGGWCCC 1 cut(s) 155
KpnI GGTACC 1 cut(s) 2082
KroI GCCGGC 1 cut(s) 1734
KroNI GCCGGC 1 cut(s) 1736
Ksp22I TGATCA 2 cut(s) 490, 1597
KspAI GTTAAC 1 cut(s) 976
Kzo9I GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
LmnI GCTCC 4 cut(s) 1625, 1639, 2032, 2716
Lsp1109I GCAGC 7 cut(s) 1057, 1120, 1142, 1574, 1810, 1924, 2011
MabI ACCWGGT 1 cut(s) 2695
MaeII ACGT 4 cut(s) 841, 2009, 2852, 2959
MaeIII GTNAC 6 cut(s) 188, 755, 1320, 1356, 2543, 2960
MalI GATC 6 cut(s) 492, 1246, 1437, 1599, 1803, 2406
MbiI CCGCTC 3 cut(s) 399, 1006, 1642
MboI GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
MhlI GDGCHC 1 cut(s) 2439
MlyI GAGTC 2 cut(s) 658, 1217
MmeI TCCRAC 6 cut(s) 496, 641, 677, 878, 2157, 2835
Mph1103I ATGCAT 1 cut(s) 1567
MroNI GCCGGC 1 cut(s) 1734
MroXI GAANNNNTTC 1 cut(s) 1968
MslI CAYNNNNRTG 3 cut(s) 1275, 2343, 2646
MspA1I CMGCKG 2 cut(s) 1133, 1649
MspI CCGG 3 cut(s) 499, 1735, 1894
MspR9I CCNGG 6 cut(s) 499, 980, 2163, 2611, 2697, 2715
MssI GTTTAAAC 1 cut(s) 1449
Mva1269I GAATGC 1 cut(s) 2774
MvaI CCWGG 5 cut(s) 980, 2163, 2611, 2697, 2715
MwoI GCNNNNNNNGC 7 cut(s) 116, 254, 830, 1025, 1625, 1934, 2748
NaeI GCCGGC 1 cut(s) 1736
NciI CCSGG 1 cut(s) 499
NdeI CATATG 1 cut(s) 1914
NdeII GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
NgoMIV GCCGGC 1 cut(s) 1734
NlaIV GGNNCC 5 cut(s) 156, 157, 1765, 2080, 2701
NmeAIII GCCGAG 1 cut(s) 764
NmuCI GTSAC 3 cut(s) 188, 1356, 2543
NsiI ATGCAT 1 cut(s) 1567
NspI RCATGY 5 cut(s) 734, 935, 1328, 1565, 2417
PaeI GCATGC 1 cut(s) 1565
PceI AGGCCT 2 cut(s) 1672, 2482
PciI ACATGT 3 cut(s) 730, 931, 2413
PcsI WCGNNNNNNNCGW 1 cut(s) 2956
PctI GAATGC 1 cut(s) 2774
PdiI GCCGGC 1 cut(s) 1736
PdmI GAANNNNTTC 1 cut(s) 1968
PfeI GAWTC 7 cut(s) 452, 569, 635, 793, 1118, 1525, 2225
PflMI CCANNNNNTGG 1 cut(s) 959
PinAI ACCGGT 1 cut(s) 1893
PkrI GCNGC 7 cut(s) 1072, 1132, 1135, 1589, 1825, 1939, 2026
PleI GAGTC 2 cut(s) 658, 1217
PmeI GTTTAAAC 1 cut(s) 1449
PpsI GAGTC 2 cut(s) 658, 1217
PpuMI RGGWCCY 2 cut(s) 155, 2693
PscI ACATGT 3 cut(s) 730, 931, 2413
PsiI TTATAA 1 cut(s) 2490
Psp124BI GAGCTC 1 cut(s) 2439
Psp1406I AACGTT 1 cut(s) 2009
Psp5II RGGWCCY 2 cut(s) 155, 2693
Psp6I CCWGG 5 cut(s) 978, 2161, 2609, 2695, 2713
PspEI GGTNACC 1 cut(s) 2543
PspFI CCCAGC 2 cut(s) 2082, 2886
PspGI CCWGG 5 cut(s) 978, 2161, 2609, 2695, 2713
PspN4I GGNNCC 5 cut(s) 156, 157, 1765, 2080, 2701
PspPI GGNCC 5 cut(s) 155, 1877, 2110, 2282, 2693
PspPPI RGGWCCY 2 cut(s) 155, 2693
PsrI GAACNNNNNNTAC 2 cut(s) 2772, 2804
PstI CTGCAG 1 cut(s) 1402
PvuII CAGCTG 2 cut(s) 1133, 1649
RsaI GTAC 8 cut(s) 337, 406, 580, 713, 914, 1657, 2052, 2080
RsaNI GTAC 8 cut(s) 336, 405, 579, 712, 913, 1656, 2051, 2079
RseI CAYNNNNRTG 3 cut(s) 1275, 2343, 2646
SacI GAGCTC 1 cut(s) 2439
SatI GCNGC 7 cut(s) 1071, 1131, 1134, 1588, 1824, 1938, 2025
Sau3AI GATC 6 cut(s) 490, 1244, 1435, 1597, 1801, 2404
Sau96I GGNCC 5 cut(s) 155, 1877, 2110, 2282, 2693
ScaI AGTACT 2 cut(s) 337, 580
SchI GAGTC 2 cut(s) 658, 1217
ScrFI CCNGG 6 cut(s) 499, 980, 2163, 2611, 2697, 2715
SduI GDGCHC 1 cut(s) 2439
SexAI ACCWGGT 1 cut(s) 2695
SfcI CTRYAG 3 cut(s) 408, 1398, 2473
SinI GGWCC 5 cut(s) 155, 1877, 2110, 2282, 2693
SmiMI CAYNNNNRTG 3 cut(s) 1275, 2343, 2646
SmlI CTYRAG 1 cut(s) 1607
SmoI CTYRAG 1 cut(s) 1607
SphI GCATGC 1 cut(s) 1565
SseBI AGGCCT 2 cut(s) 1672, 2482
SsiI CCGC 3 cut(s) 399, 1006, 1642
SspI AATATT 1 cut(s) 2063
SstI GAGCTC 1 cut(s) 2439
StuI AGGCCT 2 cut(s) 1672, 2482
StyD4I CCNGG 6 cut(s) 497, 978, 2161, 2609, 2695, 2713
StyI CCWWGG 1 cut(s) 2073
TaiI ACGT 4 cut(s) 844, 2012, 2855, 2962
TaqI TCGA 3 cut(s) 1046, 1438, 2950
TaqII GACCGA 1 cut(s) 1806
TatI WGTACW 5 cut(s) 335, 578, 711, 912, 2050
TfiI GAWTC 7 cut(s) 452, 569, 635, 793, 1118, 1525, 2225
TseFI GTSAC 3 cut(s) 188, 1356, 2543
TseI GCWGC 7 cut(s) 1070, 1130, 1133, 1587, 1823, 1937, 2024
Tsp45I GTSAC 3 cut(s) 188, 1356, 2543
TspGWI ACGGA 3 cut(s) 207, 1032, 2636
Van91I CCANNNNNTGG 1 cut(s) 959
VpaK11BI GGWCC 5 cut(s) 155, 1877, 2110, 2282, 2693
XagI CCTNNNNNAGG 2 cut(s) 2736, 2796
XbaI TCTAGA 2 cut(s) 1055, 2401
XceI RCATGY 5 cut(s) 734, 935, 1328, 1565, 2417
XcmI CCANNNNNNNNNTGG 1 cut(s) 2351
XmiI GTMKAC 2 cut(s) 1478, 1579
XmnI GAANNNNTTC 1 cut(s) 1968
ZrmI AGTACT 2 cut(s) 337, 580
Zsp2I ATGCAT 1 cut(s) 1567
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.