Rh2CG537600

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0014776
Physical Location & Seq
Forward (+)
71479575 .. 71483680
4106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG537600.1

Sequence Viewer

Length: 2943 bp
ATGAGCCAAAGAACTGGGAAAACTGAACCCAATTTTTCGTCTTTAACCACTAAGTTTTGTGATGGAAATATGAACACTAAGTGGGTAGAAAAGTTATCTCAGAACAGTGCTAGTGTAGCCGCTCCATCTGTGTCATATGGGTATTGGAATTCTGAACCCAATCCTTTATCTTTAAGCACTGGTTTTTGTGATGGAGATTTTGCTGAGAAAAGCAAGAAGTGGGTGGGAAAGTCATCTAAGAGCAGTGCTAGTGTAGCCTCTCCACCTGCAAGACATGAGCATCGGAATTCTGAACCCGATCCTCTGTCTTTGAGCTCCGGCATACCTGATGGAAGTATTGCTGAGAAAAAGAAGAAGATGGTGAACAAGAAGAGGGTTGGAAAGTCATCTCAGAGCAGTGGTGGTGGTGTAGCCTCTCCATCTGTATCACATGGGAATGAGGTTTCCGAAGATTCAACGGTCCACATTTCCAAGAAACTTTCGTCTCCTGATCATACCCAGAACAGCTTATCAGTTGGAATGCAGAGTTCTGATGACTGTTCAAAGATAAGCAAACAAGGGTCTGATGAATTAAGCAGTACTAGTGCTGTTGAGGATGTTGTAGTTCAGTGTAACAAACAGGTTGAACTTGAAGATTCCAATAATCGAAGCCACACAGGTTGCACTTACAATGGAAAAGAAAATAGGCATTTTGGTTGGAACAGGAGGCGGTACAATGCCAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATATTAACCCAGCGGAGAATCGTTTTGCGGCTGAGCGTAGCTCATTAGCTAATGATGGTATCTTACCTTATCCATTGATTTCATCTGGATACAACAATGGAAAAGAAAATAGGCATATTGGTTGGAACAGGAAGCAGTACAATGCTAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATGTCAACCTGGCAGAGAATCGTTTTTGGTCTGAGCGGAATTCATTAGCCAATGATGCCATCTCACCTAATCAGTTGAATTCCTCTGGACACAAAAATGCTGCTTATGGATATAGAAAAAGGGATACCCCTCCAAGACTATTGAATGAATCATCACAGGGGGCTGCTTCTCCACAGAGGTTGAATGGGACACTTTTTGTTTCAGTAAAAAGTCAAACGGAAGGCTCGGAAAGTGACTCTGAAAAATTAGTAGGAAGATCACCTAATTCAATTAAGCCTGTGAATTGCAATATGAAAAAAGGACCCCGCAATTATGAAGCAGTCTTCTCTGAGTTACACGGTAAGTGTAAACAATTGTCAATGGGTTGTTTTGATATGCACGATTACAAGAGAGATGCTGCAGGAACAAATGGCAAGCAGATTGCAAGTCATGGTGATCGACACTGTATAACCTCACCTTCCATGTATTCTAAAATGTCTACTCAGGGAGTGATGAATGGTATTCAACAACACAAATTCAGGAAGATACCAAGCATGGAACATGAGTTTGGTAAGTTGGTACATGTATCCTTGGACGGTATACCATGCTTTCATACTGATCATAAACTTGAGAAAGATACTTCTGGAGCAAATATTATGGAGCAGACAGCTGTTGGTACAAAAGAGTTCAGGCCAGTGGACAGAATTTCATCTGCCAGTATCTCCAATGAGTTCAATCTCTTACCAGATTTAAGCAGGGAGTTAAATAATAGCCATCTGGGAGGAAACGCAATATCCTGCAATCAACTGATTTCTTATGATGATCCAAAGGTTTATCAGTCTACTGCTGAAATAGGTCAAAAAATAGAAAGAAAAGGTTATGATGCAAAGAATAGAGGACTAAAGGACCCTGACCAATTTCTAATTGGTTCAAATATGGGAATGAAAGCTCTAAATGCTGCCTACCAAATGCAATTAGCATCTGAAACTGTTCAGCTCGCAATGGGTTGTCCACTTGCAGAGTTTGAAACATTCATCCACTGCGCTGTTCCTGTTATTCCTTCTTCGTCTGTACATAAAGAATATTCTGTTTCCTTGGGTACTCAGCCATCTCACAGTTTACTATCCAAGGACCAGATACCAAATGTATCACTTCACAGTGTTTGGAACTGGTATGAGATACCAGGGAATTATGGGTTGGATGTCAAGGCAGTTTGTCCTAAAACCCTGACTGGCCTTCCAAATGATTCAATGTCATTCCAAGCCTATTTTGTTCCTTCCCTTTCTGCTATTCAATTGTTTGGACCACACATCCCTGGTTGCAAAAGATCATTTTCCAATTCTTCAGAAGCAGTACATCTCAACCATATTCGGGTTGGTTCATTTGATGTTGCCCTACATGATGGAAGTTGTGTTCAAAGTCTGGATTGTTCACCTGTCTTCTCCTCTGATGCTGAGCTCATATTTGAGTTTTTTGAGGTTGAACTGCCACACCACCGGAGGTCTTTTTACAACAAAATTCTGGAGCTAATTGGGGCTGGAACTTCTAATCCTCAAGTATTTGGTGACCCATCAAAGCTCACTAGTCTGAATTTGCCTGATTTACATCCTGCATCCTGGTTTTCGGTGGCTTGGTATCCTATATATCAAATTCCAGAAGGGCACCTACGCGCATCATTCTTGACTTACCATTCACTTGGACATTTTGTTCAGAGACCTGGTTCAACTGTTGCTCCAGGTTGCATTTTCTTCCCTGTGTTAGGCTTGCAAAGCTACAATTCTCAGGATGAATGCTGGTTTGAACCCAAAATACCTTCTTCAGAACCGACATCTTTTGACACCACAGGAATTCTCATAAAAAGGCTCAGGACGTTGGATGAAAATGCTTTACATTTCGCTAGAGGCTGGGTTTACAAGGACAAAGTCATGGTGCAGAACAGACATCCAGATTACGAGTTCTTCACTTCCCGAAAAACACGTTACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

980

Amino Acids

108.53

Weight (kDa)

8.75

Isoelectric Point (pI)

43.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 658 - 972 6.9e-56 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014776)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44320
malus_domestica MD17G1087100.v1.1
prunus_persica Prupe.3G227600_v2.0.a1 Prupe.3G227600_v2.0.a1
pyrus_communis pycom09g02250 pycom17g08430
rosa_chinensis RchiOBHm_Chr2g0161201
rosa_laevigata RLG00000021267
rosa_multiflora Rmu_sc0006420.1_g000047
rosa_roxburghii Rroxscaffold_2G00089030
rosa_rugosa Rorug02G0487000 Rorug02G0487100
rosa_samantha Rh2AG553800 Rh2BG567300 Rh2CG537600 Rh2DG576700
rosa_wichuraiana Rw2G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
Acc36I ACCTGC 1 cut(s) 274
AccB1I GGYRCC 1 cut(s) 2616
AccBSI CCGCTC 2 cut(s) 122, 1012
AccI GTMKAC 3 cut(s) 1454, 1555, 1796
AccII CGCG 1 cut(s) 2625
AciI CCGC 6 cut(s) 120, 709, 788, 803, 1012, 1282
AclWI GGATC 2 cut(s) 293, 1772
AcuI CTGAAG 2 cut(s) 2283, 2757
AdeI CACNNNGTG 1 cut(s) 81
AfaI GTAC 8 cut(s) 580, 713, 914, 1536, 1633, 2028, 2056, 2310
AfiI CCNNNNNNNGG 2 cut(s) 2326, 2714
AflIII ACRYGT 4 cut(s) 730, 931, 1537, 2930
AhlI ACTAGT 2 cut(s) 581, 2537
AjnI CCWGG 7 cut(s) 719, 984, 2137, 2269, 2570, 2671, 2689
AjuI GAANNNNNNNTTGG 4 cut(s) 1506, 1538, 2135, 2167
AloI GAACNNNNNNTCC 6 cut(s) 2352, 2384, 2488, 2520, 2646, 2678
Alw21I GWGCWC 2 cut(s) 317, 2415
Alw26I GTCTC 2 cut(s) 489, 2662
AlwI GGATC 2 cut(s) 293, 1772
AoxI GGCC 2 cut(s) 1646, 2188
ApeKI GCWGC 4 cut(s) 1076, 1139, 1373, 1913
Asp700I GAANNNNTTC 1 cut(s) 1944
AspLEI GCGC 2 cut(s) 2000, 2627
AspS9I GGNCC 5 cut(s) 460, 1277, 1861, 2086, 2258
AsuHPI GGTGA 7 cut(s) 373, 1032, 1227, 1421, 1422, 2379, 2531
AvaII GGWCC 5 cut(s) 460, 1277, 1861, 2086, 2258
BaeGI GKGCMC 1 cut(s) 2619
BanI GGYRCC 1 cut(s) 2616
BanII GRGCYC 2 cut(s) 317, 2415
BarI GAAGNNNNNNTAC 2 cut(s) 2604, 2636
BbsI GAAGAC 2 cut(s) 1291, 2386
Bbv12I GWGCWC 2 cut(s) 317, 2415
BbvI GCAGC 4 cut(s) 1063, 1126, 1360, 1900
BciT130I CCWGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
BciVI GTATCC 4 cut(s) 857, 1093, 1552, 2601
BclI TGATCA 2 cut(s) 490, 1573
BcoDI GTCTC 2 cut(s) 489, 2662
BcuI ACTAGT 2 cut(s) 581, 2537
BfaI CTAG 6 cut(s) 111, 249, 582, 921, 2538, 2853
BfmI CTRYAG 1 cut(s) 1374
BfuAI ACCTGC 1 cut(s) 274
BfuI GTATCC 4 cut(s) 857, 1093, 1552, 2601
BisI GCNGC 6 cut(s) 120, 804, 1077, 1140, 1374, 1914
BlpI GCTNAGC 2 cut(s) 807, 2409
BlsI GCNGC 6 cut(s) 121, 805, 1078, 1141, 1375, 1915
BmcAI AGTACT 1 cut(s) 580
Bme1390I CCNGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
Bme18I GGWCC 5 cut(s) 460, 1277, 1861, 2086, 2258
BmgT120I GGNCC 5 cut(s) 460, 1277, 1861, 2086, 2258
BmiI GGNNCC 3 cut(s) 1279, 1863, 2618
BmrFI CCNGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
BmrI ACTGGG 1 cut(s) 24
BmsI GCATC 8 cut(s) 289, 1021, 1360, 1828, 1943, 2395, 2576, 2636
BmuI ACTGGG 1 cut(s) 24
BpiI GAAGAC 2 cut(s) 1291, 2386
BplI GAGNNNNNCTC 2 cut(s) 800, 832
BpmI CTGGAG 3 cut(s) 1620, 2498, 2673
Bpu10I CCTNAGC 1 cut(s) 2819
Bpu1102I GCTNAGC 2 cut(s) 807, 2409
BpuEI CTTGAG 2 cut(s) 1604, 2493
BsaBI GATNNNNATC 1 cut(s) 2559
BsaI GGTCTC 1 cut(s) 2662
BsaJI CCNNGG 6 cut(s) 720, 1545, 2049, 2082, 2138, 2269
BsaWI WCCGGW 1 cut(s) 2451
BsaXI ACNNNNNCTCC 2 cut(s) 2671, 2701
Bsc4I CCNNNNNNNGG 2 cut(s) 2326, 2714
Bse1I ACTGG 6 cut(s) 19, 184, 1649, 1671, 2129, 2191
Bse3DI GCAATG 1 cut(s) 1962
Bse8I GATNNNNATC 1 cut(s) 2559
BseBI CCWGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
BseDI CCNNGG 6 cut(s) 720, 1545, 2049, 2082, 2138, 2269
BseGI GGATG 9 cut(s) 601, 1989, 2161, 2265, 2560, 2567, 2746, 2836, 2896
BseJI GATNNNNATC 1 cut(s) 2559
BseLI CCNNNNNNNGG 2 cut(s) 2326, 2714
BseMI GCAATG 1 cut(s) 1962
BseNI ACTGG 6 cut(s) 19, 184, 1649, 1671, 2129, 2191
BseRI GAGGAG 1 cut(s) 2389
BseSI GKGCMC 1 cut(s) 2619
BseXI GCAGC 4 cut(s) 1063, 1126, 1360, 1900
BseYI CCCAGC 2 cut(s) 784, 2859
BsgI GTGCAG 1 cut(s) 2906
Bsh1236I CGCG 1 cut(s) 2625
BshFI GGCC 2 cut(s) 1648, 2190
BshNI GGYRCC 1 cut(s) 2616
BsiHKAI GWGCWC 2 cut(s) 317, 2415
BsiSI CCGG 2 cut(s) 318, 2452
BslFI GGGAC 1 cut(s) 1177
BslI CCNNNNNNNGG 2 cut(s) 2326, 2714
BsmAI GTCTC 2 cut(s) 489, 2662
BsmBI CGTCTC 1 cut(s) 489
BsmFI GGGAC 1 cut(s) 1177
BsmI GAATGC 2 cut(s) 525, 2750
BsnI GGCC 2 cut(s) 1648, 2190
Bso31I GGTCTC 1 cut(s) 2662
Bsp1286I GDGCHC 3 cut(s) 317, 2415, 2619
Bsp1407I TGTACA 1 cut(s) 2026
Bsp143I GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
Bsp1720I GCTNAGC 2 cut(s) 807, 2409
BspACI CCGC 6 cut(s) 120, 709, 788, 803, 1012, 1282
BspANI GGCC 2 cut(s) 1648, 2190
BspFNI CGCG 1 cut(s) 2625
BspLI GGNNCC 3 cut(s) 1279, 1863, 2618
BspMAI CTGCAG 1 cut(s) 1378
BspMI ACCTGC 1 cut(s) 274
BspPI GGATC 2 cut(s) 293, 1772
BspT107I GGYRCC 1 cut(s) 2616
BspTNI GGTCTC 1 cut(s) 2662
BsrBI CCGCTC 2 cut(s) 122, 1012
BsrDI GCAATG 1 cut(s) 1962
BsrGI TGTACA 1 cut(s) 2026
BsrI ACTGG 6 cut(s) 19, 184, 1649, 1671, 2129, 2191
BssECI CCNNGG 6 cut(s) 720, 1545, 2049, 2082, 2138, 2269
BssMI GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
BssNAI GTATAC 1 cut(s) 1556
BssT1I CCWWGG 3 cut(s) 1545, 2049, 2082
Bst1107I GTATAC 1 cut(s) 1556
Bst2UI CCWGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
Bst6I CTCTTC 1 cut(s) 365
BstAUI TGTACA 1 cut(s) 2026
BstC8I GCNNGC 3 cut(s) 1391, 1953, 2720
BstEII GGTNACC 1 cut(s) 2519
BstENI CCTNNNNNAGG 1 cut(s) 2712
BstF5I GGATG 9 cut(s) 601, 1989, 2161, 2265, 2560, 2567, 2746, 2836, 2896
BstFNI CGCG 1 cut(s) 2625
BstHHI GCGC 2 cut(s) 2000, 2627
BstKTI GATC 7 cut(s) 301, 493, 1235, 1414, 1576, 1780, 2285
BstMAI GTCTC 2 cut(s) 489, 2662
BstMBI GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
BstMWI GCNNNNNNNGC 5 cut(s) 116, 254, 1031, 1910, 2724
BstNI CCWGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
BstNSI RCATGY 3 cut(s) 734, 935, 1541
BstPI GGTNACC 1 cut(s) 2519
BstSCI CCNGG 7 cut(s) 719, 984, 2137, 2269, 2570, 2671, 2689
BstSFI CTRYAG 1 cut(s) 1374
BstSLI GKGCMC 1 cut(s) 2619
BstUI CGCG 1 cut(s) 2625
BstV1I GCAGC 4 cut(s) 1063, 1126, 1360, 1900
BstV2I GAAGAC 2 cut(s) 1291, 2386
BstXI CCANNNNNNTGG 2 cut(s) 14, 2651
BstZ17I GTATAC 1 cut(s) 1556
BsuI GTATCC 4 cut(s) 857, 1093, 1552, 2601
BsuRI GGCC 2 cut(s) 1648, 2190
BtsCI GGATG 9 cut(s) 601, 1989, 2161, 2265, 2560, 2567, 2746, 2836, 2896
BtsI GCAGTG 3 cut(s) 250, 403, 1993
BtsIMutI CAGTG 9 cut(s) 112, 177, 250, 403, 614, 1417, 1656, 1993, 2119
BveI ACCTGC 1 cut(s) 274
Cac8I GCNNGC 3 cut(s) 1391, 1953, 2720
CfoI GCGC 2 cut(s) 2000, 2627
Cfr13I GGNCC 5 cut(s) 460, 1277, 1861, 2086, 2258
CsiI ACCWGGT 1 cut(s) 2671
Csp6I GTAC 8 cut(s) 579, 712, 913, 1535, 1632, 2027, 2055, 2309
CspCI CAANNNNNGTGG 4 cut(s) 641, 676, 1137, 1172
CviQI GTAC 8 cut(s) 579, 712, 913, 1535, 1632, 2027, 2055, 2309
DpnI GATC 7 cut(s) 300, 492, 1234, 1413, 1575, 1779, 2284
DpnII GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
DraIII CACNNNGTG 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 365
EarI CTCTTC 1 cut(s) 365
Ecl136II GAGCTC 2 cut(s) 315, 2413
Eco130I CCWWGG 3 cut(s) 1545, 2049, 2082
Eco24I GRGCYC 2 cut(s) 317, 2415
Eco31I GGTCTC 1 cut(s) 2662
Eco47I GGWCC 5 cut(s) 460, 1277, 1861, 2086, 2258
Eco53kI GAGCTC 2 cut(s) 315, 2413
Eco57I CTGAAG 2 cut(s) 2283, 2757
Eco91I GGTNACC 1 cut(s) 2519
EcoICRI GAGCTC 2 cut(s) 315, 2413
EcoNI CCTNNNNNAGG 1 cut(s) 2712
EcoO109I RGGNCCY 2 cut(s) 1277, 1861
EcoO65I GGTNACC 1 cut(s) 2519
EcoRI GAATTC 5 cut(s) 148, 286, 1015, 1054, 2802
EcoRII CCWGG 7 cut(s) 719, 984, 2137, 2269, 2570, 2671, 2689
EcoT14I CCWWGG 3 cut(s) 1545, 2049, 2082
EcoT38I GRGCYC 2 cut(s) 317, 2415
ErhI CCWWGG 3 cut(s) 1545, 2049, 2082
Esp3I CGTCTC 1 cut(s) 489
FaqI GGGAC 1 cut(s) 1177
FauI CCCGC 1 cut(s) 1289
FauNDI CATATG 1 cut(s) 136
FbaI TGATCA 2 cut(s) 490, 1573
FblI GTMKAC 3 cut(s) 1454, 1555, 1796
Fnu4HI GCNGC 6 cut(s) 120, 804, 1077, 1140, 1374, 1914
FokI GGATG 9 cut(s) 608, 1976, 2168, 2252, 2547, 2554, 2753, 2843, 2883
FriOI GRGCYC 2 cut(s) 317, 2415
Fsp4HI GCNGC 6 cut(s) 120, 804, 1077, 1140, 1374, 1914
FspBI CTAG 6 cut(s) 111, 249, 582, 921, 2538, 2853
GlaI GCGC 2 cut(s) 1999, 2626
GluI GCNGC 6 cut(s) 120, 804, 1077, 1140, 1374, 1914
GsaI CCCAGC 2 cut(s) 788, 2863
GsuI CTGGAG 3 cut(s) 1620, 2498, 2673
HaeIII GGCC 2 cut(s) 1648, 2190
HapII CCGG 2 cut(s) 318, 2452
HhaI GCGC 2 cut(s) 2000, 2627
Hin6I GCGC 2 cut(s) 1998, 2625
HinP1I GCGC 2 cut(s) 1998, 2625
HincII GTYRAC 1 cut(s) 982
HindII GTYRAC 1 cut(s) 982
HinfI GANTC 7 cut(s) 452, 635, 793, 994, 1124, 1211, 2201
HpaII CCGG 2 cut(s) 318, 2452
HphI GGTGA 7 cut(s) 373, 1032, 1227, 1421, 1422, 2379, 2531
HpyAV CCTTC 9 cut(s) 719, 920, 1190, 1443, 2025, 2201, 2241, 2606, 2778
HpyCH4IV ACGT 2 cut(s) 2825, 2932
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 254, 1031, 1910, 2724
HpySE526I ACGT 2 cut(s) 2825, 2932
HspAI GCGC 2 cut(s) 1998, 2625
Ksp22I TGATCA 2 cut(s) 490, 1573
Kzo9I GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
LmnI GCTCC 6 cut(s) 127, 320, 1601, 1615, 2479, 2692
Lsp1109I GCAGC 4 cut(s) 1063, 1126, 1360, 1900
LweI GCATC 8 cut(s) 289, 1021, 1360, 1828, 1943, 2395, 2576, 2636
MabI ACCWGGT 1 cut(s) 2671
MaeI CTAG 6 cut(s) 111, 249, 582, 921, 2538, 2853
MaeII ACGT 2 cut(s) 2825, 2932
MaeIII GTNAC 7 cut(s) 611, 755, 956, 1208, 1308, 2519, 2933
MalI GATC 7 cut(s) 300, 492, 1234, 1413, 1575, 1779, 2284
MbiI CCGCTC 2 cut(s) 122, 1012
MboI GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
MfeI CAATTG 2 cut(s) 1328, 2249
MhlI GDGCHC 3 cut(s) 317, 2415, 2619
MlyI GAGTC 1 cut(s) 1205
MmeI TCCRAC 6 cut(s) 358, 496, 677, 878, 2133, 2808
MroXI GAANNNNTTC 1 cut(s) 1944
MseI TTAA 7 cut(s) 44, 173, 572, 780, 1248, 1706, 1718
MslI CAYNNNNRTG 2 cut(s) 435, 1071
MspA1I CMGCKG 2 cut(s) 788, 1625
MspI CCGG 2 cut(s) 318, 2452
MspR9I CCNGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
MunI CAATTG 2 cut(s) 1328, 2249
Mva1269I GAATGC 2 cut(s) 525, 2750
MvaI CCWGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
MvnI CGCG 1 cut(s) 2625
MwoI GCNNNNNNNGC 5 cut(s) 116, 254, 1031, 1910, 2724
NdeI CATATG 1 cut(s) 136
NdeII GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
NlaIV GGNNCC 3 cut(s) 1279, 1863, 2618
NmuCI GTSAC 2 cut(s) 1208, 2519
NspI RCATGY 3 cut(s) 734, 935, 1541
PaqCI CACCTGC 1 cut(s) 274
PciI ACATGT 3 cut(s) 730, 931, 1537
PctI GAATGC 2 cut(s) 525, 2750
PdmI GAANNNNTTC 1 cut(s) 1944
PfeI GAWTC 6 cut(s) 452, 635, 793, 994, 1124, 2201
PflFI GACNNNGTC 1 cut(s) 2876
PkrI GCNGC 6 cut(s) 121, 805, 1078, 1141, 1375, 1915
PleI GAGTC 1 cut(s) 1205
PpsI GAGTC 1 cut(s) 1205
PpuMI RGGWCCY 2 cut(s) 1277, 1861
PscI ACATGT 3 cut(s) 730, 931, 1537
Psp124BI GAGCTC 2 cut(s) 317, 2415
Psp5II RGGWCCY 2 cut(s) 1277, 1861
Psp6I CCWGG 7 cut(s) 719, 984, 2137, 2269, 2570, 2671, 2689
PspEI GGTNACC 1 cut(s) 2519
PspFI CCCAGC 2 cut(s) 784, 2859
PspGI CCWGG 7 cut(s) 719, 984, 2137, 2269, 2570, 2671, 2689
PspN4I GGNNCC 3 cut(s) 1279, 1863, 2618
PspPI GGNCC 5 cut(s) 460, 1277, 1861, 2086, 2258
PspPPI RGGWCCY 2 cut(s) 1277, 1861
PsrI GAACNNNNNNTAC 2 cut(s) 2748, 2780
PstI CTGCAG 1 cut(s) 1378
PsyI GACNNNGTC 1 cut(s) 2876
PvuII CAGCTG 1 cut(s) 1625
RsaI GTAC 8 cut(s) 580, 713, 914, 1536, 1633, 2028, 2056, 2310
RsaNI GTAC 8 cut(s) 579, 712, 913, 1535, 1632, 2027, 2055, 2309
RseI CAYNNNNRTG 2 cut(s) 435, 1071
SacI GAGCTC 2 cut(s) 317, 2415
SaqAI TTAA 7 cut(s) 44, 173, 572, 780, 1248, 1706, 1718
SatI GCNGC 6 cut(s) 120, 804, 1077, 1140, 1374, 1914
Sau3AI GATC 7 cut(s) 298, 490, 1232, 1411, 1573, 1777, 2282
Sau96I GGNCC 5 cut(s) 460, 1277, 1861, 2086, 2258
ScaI AGTACT 1 cut(s) 580
SchI GAGTC 1 cut(s) 1205
ScrFI CCNGG 7 cut(s) 721, 986, 2139, 2271, 2572, 2673, 2691
SduI GDGCHC 3 cut(s) 317, 2415, 2619
SexAI ACCWGGT 1 cut(s) 2671
SfaNI GCATC 8 cut(s) 289, 1021, 1360, 1828, 1943, 2395, 2576, 2636
SfcI CTRYAG 1 cut(s) 1374
SinI GGWCC 5 cut(s) 460, 1277, 1861, 2086, 2258
SmiMI CAYNNNNRTG 2 cut(s) 435, 1071
SmlI CTYRAG 2 cut(s) 1583, 2508
SmoI CTYRAG 2 cut(s) 1583, 2508
SpeI ACTAGT 2 cut(s) 581, 2537
SsiI CCGC 6 cut(s) 120, 709, 788, 803, 1012, 1282
SspI AATATT 2 cut(s) 1609, 2039
SspMI CTAG 6 cut(s) 111, 249, 582, 921, 2538, 2853
SstI GAGCTC 2 cut(s) 317, 2415
StyD4I CCNGG 7 cut(s) 719, 984, 2137, 2269, 2570, 2671, 2689
StyI CCWWGG 3 cut(s) 1545, 2049, 2082
TaiI ACGT 2 cut(s) 2828, 2935
TaqI TCGA 2 cut(s) 646, 1414
TatI WGTACW 4 cut(s) 578, 912, 2026, 2308
TauI GCSGC 2 cut(s) 122, 806
TfiI GAWTC 6 cut(s) 452, 635, 793, 994, 1124, 2201
Tru1I TTAA 7 cut(s) 44, 173, 572, 780, 1248, 1706, 1718
Tru9I TTAA 7 cut(s) 44, 173, 572, 780, 1248, 1706, 1718
TscAI CASTG 9 cut(s) 112, 184, 250, 403, 614, 1424, 1656, 2000, 2119
TseFI GTSAC 2 cut(s) 1208, 2519
TseI GCWGC 4 cut(s) 1076, 1139, 1373, 1913
Tsp45I GTSAC 2 cut(s) 1208, 2519
TspGWI ACGGA 1 cut(s) 1208
TspRI CASTG 9 cut(s) 112, 184, 250, 403, 614, 1424, 1656, 2000, 2119
Tth111I GACNNNGTC 1 cut(s) 2876
VpaK11BI GGWCC 5 cut(s) 460, 1277, 1861, 2086, 2258
XagI CCTNNNNNAGG 1 cut(s) 2712
XceI RCATGY 3 cut(s) 734, 935, 1541
XcmI CCANNNNNNNNNTGG 2 cut(s) 1877, 2327
XmiI GTMKAC 3 cut(s) 1454, 1555, 1796
XmnI GAANNNNTTC 1 cut(s) 1944
XspI CTAG 6 cut(s) 111, 249, 582, 921, 2538, 2853
ZrmI AGTACT 1 cut(s) 580
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.