RLG00000021267

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0014776
Physical Location & Seq
Forward (+)
73548940 .. 73552975
4036 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000021267

Sequence Viewer

Length: 2940 bp
ATGAGCCAAAGAATTGGGAATTCTGAACCCAAATTTTTGTCTTTAACCACTAACTTTCGTGATGGAAATATGAACTCTAAGTGGGTGGAAAAGTTATATCAGAACAGTGCTAGTGTAGCCTCTCCATCTGTGTCATATGGGTATTGGAATTCTGAACCCAATCCTTTATCTTTAAGCACTGGTTTTTGTGATGGAGATTTTGCTGAGAAAAGCAACAAGTGGGTAGGAAAGTCATCCAAGAGCAGCGCTAGTGTAGCCTCTCCACCTGCATCACATGAGCATCGGAATTCTGAACCCGATCCTCTGTCTTTGAGCTCCGGCGTACCTGATGGAAGTATTGCTGAGAAAAAGAAGAAGAAGATGATGAAGAAGAAGAGGGTTGGAAAGTCATCTCAGAGCAGTGGTTGTGGTGTAGCCTCTCCATTTGTATCACATGGGAATGAGGTTTCCGAAGATTCAACAGTCCACATTTCCGAGAAACTTTCGTCTCCTGATCATACCCAGAACAGCTTATCAGTTGGAATGCAGAGTTCTGATTACTGTTCAAAGATAAGCAAACAAGGGTCTGATGAATTAAGCAGGACTAGTATTGTTGAGGATGTTGTAGTTCTGTGTAACAAACAGGTTGAACTTGAAGATTCCAAGAATCGAATCCACACAGGTTGCACTTACAATGGAAAAGAAAATAGGCATTTTGGTTGGAACAGGAGGCAGTACAATGCCAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATGTTAAACCGGCAGAGAATCGTTTTGCAGCTGAGCGTAGCTCATTAACTAATGATGGTATCTTACCTTCTCCGTTGATTTCATCTGGATACAACAATGGAAAAGAAAATAGGCATATTGGTTGGAACAGGAAGCAGTACAATGCTAGGGAAGGACATGTGAATTGGGGGAAGAAACCGAGTTACAGAAATGGTGTGAAAGATGTCAACCTGGCAGAGAATCGTTTTTGGTCTGAGCGGAATTCATTAGCCAATGATGCCATCTCACCTACTCCATCGAATTCCTCTGGACACAAAAATGCTGCTTATGGGTATAGAAAAAGGGATGCCCCTCCAAGACTATTGAATGAGTCATCACAGGGGGCTGCTTCTCCACAGAGGTTGAATGGGACACTTTTTGTTTCAGTAAAAAGTCAAACGGAAGGCTTGGAAAGTGACTCTGAAAAATTAGTAGGAAGATCACCTAATTCAATTAAGCCTGTGAATTGCAATATGAAAAAAGGACCCCGCAATTATGAAGCAGCCTTCTCTGAGTTGCACGGTAAGTGTAAACAATTGTCAATGGGTTGTTTTGATATGCATGATTACAAGAGAGATGCTGCAGGAACAAATGGCAAGCAGATTGCAAGTCATGGTGATCGACACTATTTAACCTCACCTTCCATGTATTCTAAAATGTCTACTCAGGGAGTGATGAATGGTATTCAACAACACAAATTCAGGAAGATACCAAGCATGGAACATGAGTTTGGTAAGTTGGTACATGTATCCTTGGACGGTATACCATGCTTTCATACTGATCACAAACTTGAGAAAGATACTTCTGGAGCAAATATTATGGAGCGGACAGCTGTTGGTACAAAAGAGTTCAGGCCAGTGGACAGAATTTCATCTGCCAGTATCTCCGATGAGTTCAATCTCTTACCAGATTTAAGCAGGGAGTTAAATAATAGCCATCTGGGAGGAAACACAATATCCTGCAATCAACTGATTTCTTATGATGATCCAAAGGTTTATCAGTCTGCTGCTGAAATAGGTCAAAAAATAGAAAGAAAAGGTTATGATGCAAAGAATAGAGGACCAAAGGACCCTGACCAATTTCTAATTGGTTCAAATATGGGAATGAAAGCTCTAAATGCTGCTTACCAAATGCAATTAGCATCTGAAACTGTTCAGCTCGCAATGGGTTGTCCACTTGCAGAGTTTGAAACATTCATCCACTGCGCTGTTCCTGTTATTCCTTCCTCGTCTGTACATAAAGAATATTCTGTTTCCTTGGGTACTCAGCCATCTCACGGTTTACTATCCAAGCACCAGATACCAAATGTATCACTTCACAGTGTTTGGAACTGGTATGAGATACCAGGGAATTATGGGTTGGATGTCAAGGCAGTTTGTCCTAAAACCCTCACTGGCCTTCCAAATGATTCATTCCAAGCCTATTTTGTTCCTTCCCTTTCTGCTATTCAATTGTTTGGACCACACATCCCTGGTTGCGAAAGATCATTTTCCAATTCTTCAGAAGCAGTACATCTCAACCATATTCGGGTTGGTTCATTTGATGTTGCCCTACATGATGGAAGTTGCGTTCAAAGTCTGGATTGTTCACCTGTCTTGTCCTCTGATGCTGAGCTCATATTTGAGTTTTTTGAGGTTCAACTGCCACACCACCGGAGGCCTTTTTACAACAAAATTCTGGAGCTAATTGGTGCTGGAACTTCTAATCCTCAAGTATTTGGTGACCCATCAAAGCTCACTAGTCTGAATTTGCCTGATTTACATCCTGCATCCTGGTTTTCGGTGGCTTGGTATCCTATATATCAAATTCCAGAAGGGTACCTACGCACATCATTCTTGACTTACCATTCACTTGGACATTTTGTTCAGAGACCTGGTTCAACTGTTGCTCCAGGTTGCATTTTCTTCCCCGTGTTAGGCTTGCAAAGCTACAATTCTCAGGATGAATGCTGGTTTGAACCCAAAATACCTTCTTCAGAACCGACATCTTTTGACACCACAGGAATTCTCATAAAAAGGCTCAGGACGTTGGACGAAAATGCTTTACATTTCGCTAGAGGCTGGGTTTACGAAGATAAAGTCATGGTGCAGAACAGACATCCAGATTACGAGTTCTTCACATCCCGAAAAACATGTTACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

980

Amino Acids

108.69

Weight (kDa)

8.65

Isoelectric Point (pI)

42.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 659 - 971 3.4e-56 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014776)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44320
malus_domestica MD17G1087100.v1.1
prunus_persica Prupe.3G227600_v2.0.a1 Prupe.3G227600_v2.0.a1
pyrus_communis pycom09g02250 pycom17g08430
rosa_chinensis RchiOBHm_Chr2g0161201
rosa_laevigata RLG00000021267
rosa_multiflora Rmu_sc0006420.1_g000047
rosa_roxburghii Rroxscaffold_2G00089030
rosa_rugosa Rorug02G0487000 Rorug02G0487100
rosa_samantha Rh2AG553800 Rh2BG567300 Rh2CG537600 Rh2DG576700
rosa_wichuraiana Rw2G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
Acc36I ACCTGC 1 cut(s) 274
Acc65I GGTACC 1 cut(s) 2613
AccB1I GGYRCC 1 cut(s) 2613
AccBSI CCGCTC 2 cut(s) 1015, 1621
AccI GTMKAC 2 cut(s) 1457, 1558
AciI CCGC 3 cut(s) 1015, 1285, 1621
AclWI GGATC 2 cut(s) 293, 1775
AcuI CTGAAG 2 cut(s) 2280, 2754
AfaI GTAC 9 cut(s) 324, 716, 917, 1539, 1636, 2031, 2059, 2307, 2615
AfeI AGCGCT 1 cut(s) 247
AfiI CCNNNNNNNGG 3 cut(s) 2072, 2323, 2711
AflIII ACRYGT 4 cut(s) 733, 934, 1540, 2927
AhlI ACTAGT 2 cut(s) 584, 2534
AjnI CCWGG 7 cut(s) 722, 987, 2140, 2266, 2567, 2668, 2686
AjuI GAANNNNNNNTTGG 4 cut(s) 1509, 1541, 2138, 2170
AloI GAACNNNNNNTCC 6 cut(s) 2349, 2381, 2485, 2517, 2643, 2675
Alw21I GWGCWC 2 cut(s) 317, 2412
Alw26I GTCTC 2 cut(s) 492, 2659
AlwI GGATC 2 cut(s) 293, 1775
Aor51HI AGCGCT 1 cut(s) 247
AoxI GGCC 3 cut(s) 1649, 2191, 2453
ApeKI GCWGC 8 cut(s) 243, 806, 1079, 1142, 1298, 1376, 1802, 1916
ArsI GACNNNNNNTTYG 2 cut(s) 2859, 2891
Asp700I GAANNNNTTC 1 cut(s) 1947
Asp718I GGTACC 1 cut(s) 2613
AspLEI GCGC 2 cut(s) 248, 2003
AspS9I GGNCC 4 cut(s) 1280, 1856, 1864, 2255
AsuHPI GGTGA 6 cut(s) 1035, 1230, 1424, 1425, 2376, 2528
AvaII GGWCC 4 cut(s) 1280, 1856, 1864, 2255
BanI GGYRCC 1 cut(s) 2613
BanII GRGCYC 2 cut(s) 317, 2412
BarI GAAGNNNNNNTAC 4 cut(s) 829, 861, 2601, 2633
Bbv12I GWGCWC 2 cut(s) 317, 2412
BbvI GCAGC 8 cut(s) 255, 818, 1066, 1129, 1310, 1363, 1789, 1903
BciT130I CCWGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
BciVI GTATCC 3 cut(s) 860, 1555, 2598
BclI TGATCA 2 cut(s) 493, 1576
BcoDI GTCTC 2 cut(s) 492, 2659
BcuI ACTAGT 2 cut(s) 584, 2534
BfaI CTAG 6 cut(s) 111, 249, 585, 924, 2535, 2850
BfmI CTRYAG 1 cut(s) 1377
BfoI RGCGCY 1 cut(s) 249
BfuAI ACCTGC 1 cut(s) 274
BfuI GTATCC 3 cut(s) 860, 1555, 2598
BisI GCNGC 8 cut(s) 244, 807, 1080, 1143, 1299, 1377, 1803, 1917
BlpI GCTNAGC 2 cut(s) 810, 2406
BlsI GCNGC 8 cut(s) 245, 808, 1081, 1144, 1300, 1378, 1804, 1918
Bme1390I CCNGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
Bme18I GGWCC 4 cut(s) 1280, 1856, 1864, 2255
BmgT120I GGNCC 4 cut(s) 1280, 1856, 1864, 2255
BmiI GGNNCC 3 cut(s) 1282, 1866, 2615
BmrFI CCNGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
BmsI GCATC 9 cut(s) 278, 289, 1024, 1093, 1363, 1831, 1946, 2392, 2573
BplI GAGNNNNNCTC 2 cut(s) 803, 835
BpmI CTGGAG 3 cut(s) 1623, 2495, 2670
Bpu10I CCTNAGC 1 cut(s) 2816
Bpu1102I GCTNAGC 2 cut(s) 810, 2406
BpuEI CTTGAG 2 cut(s) 1607, 2490
BsaBI GATNNNNATC 1 cut(s) 2556
BsaI GGTCTC 1 cut(s) 2659
BsaJI CCNNGG 5 cut(s) 723, 1548, 2052, 2141, 2266
BsaWI WCCGGW 1 cut(s) 2448
BsaXI ACNNNNNCTCC 2 cut(s) 2668, 2698
Bsc4I CCNNNNNNNGG 3 cut(s) 2072, 2323, 2711
Bse118I RCCGGY 1 cut(s) 787
Bse1I ACTGG 5 cut(s) 184, 1652, 1674, 2132, 2194
Bse3DI GCAATG 1 cut(s) 1965
Bse8I GATNNNNATC 1 cut(s) 2556
BseBI CCWGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
BseDI CCNNGG 5 cut(s) 723, 1548, 2052, 2141, 2266
BseJI GATNNNNATC 1 cut(s) 2556
BseLI CCNNNNNNNGG 3 cut(s) 2072, 2323, 2711
BseMI GCAATG 1 cut(s) 1965
BseNI ACTGG 5 cut(s) 184, 1652, 1674, 2132, 2194
BseXI GCAGC 8 cut(s) 255, 818, 1066, 1129, 1310, 1363, 1789, 1903
BseYI CCCAGC 1 cut(s) 2856
BsgI GTGCAG 1 cut(s) 2903
BshFI GGCC 3 cut(s) 1651, 2193, 2455
BshNI GGYRCC 1 cut(s) 2613
BsiHKAI GWGCWC 2 cut(s) 317, 2412
BsiSI CCGG 3 cut(s) 318, 788, 2449
BslFI GGGAC 1 cut(s) 1180
BslI CCNNNNNNNGG 3 cut(s) 2072, 2323, 2711
BsmAI GTCTC 2 cut(s) 492, 2659
BsmBI CGTCTC 1 cut(s) 492
BsmFI GGGAC 1 cut(s) 1180
BsmI GAATGC 2 cut(s) 528, 2747
BsnI GGCC 3 cut(s) 1651, 2193, 2455
Bso31I GGTCTC 1 cut(s) 2659
Bsp1286I GDGCHC 2 cut(s) 317, 2412
Bsp1407I TGTACA 1 cut(s) 2029
Bsp143I GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
Bsp1720I GCTNAGC 2 cut(s) 810, 2406
BspACI CCGC 3 cut(s) 1015, 1285, 1621
BspANI GGCC 3 cut(s) 1651, 2193, 2455
BspLI GGNNCC 3 cut(s) 1282, 1866, 2615
BspMAI CTGCAG 1 cut(s) 1381
BspMI ACCTGC 1 cut(s) 274
BspPI GGATC 2 cut(s) 293, 1775
BspT107I GGYRCC 1 cut(s) 2613
BspTNI GGTCTC 1 cut(s) 2659
BsrBI CCGCTC 2 cut(s) 1015, 1621
BsrDI GCAATG 1 cut(s) 1965
BsrFI RCCGGY 1 cut(s) 787
BsrGI TGTACA 1 cut(s) 2029
BsrI ACTGG 5 cut(s) 184, 1652, 1674, 2132, 2194
BssAI RCCGGY 1 cut(s) 787
BssECI CCNNGG 5 cut(s) 723, 1548, 2052, 2141, 2266
BssMI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
BssNAI GTATAC 1 cut(s) 1559
BssT1I CCWWGG 2 cut(s) 1548, 2052
Bst1107I GTATAC 1 cut(s) 1559
Bst2UI CCWGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
Bst4CI ACNGT 9 cut(s) 107, 463, 542, 1319, 1556, 1948, 2075, 2117, 2680
Bst6I CTCTTC 1 cut(s) 368
BstAUI TGTACA 1 cut(s) 2029
BstC8I GCNNGC 3 cut(s) 1394, 1956, 2717
BstEII GGTNACC 1 cut(s) 2516
BstH2I RGCGCY 1 cut(s) 249
BstHHI GCGC 2 cut(s) 248, 2003
BstKTI GATC 7 cut(s) 301, 496, 1238, 1417, 1579, 1783, 2282
BstMAI GTCTC 2 cut(s) 492, 2659
BstMBI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
BstMWI GCNNNNNNNGC 5 cut(s) 116, 254, 1034, 1913, 2721
BstNI CCWGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
BstNSI RCATGY 4 cut(s) 737, 938, 1544, 2931
BstPI GGTNACC 1 cut(s) 2516
BstSCI CCNGG 7 cut(s) 722, 987, 2140, 2266, 2567, 2668, 2686
BstSFI CTRYAG 1 cut(s) 1377
BstV1I GCAGC 8 cut(s) 255, 818, 1066, 1129, 1310, 1363, 1789, 1903
BstXI CCANNNNNNTGG 2 cut(s) 14, 2648
BstZ17I GTATAC 1 cut(s) 1559
BsuI GTATCC 3 cut(s) 860, 1555, 2598
BsuRI GGCC 3 cut(s) 1651, 2193, 2455
BtsI GCAGTG 2 cut(s) 406, 1996
BtsIMutI CAGTG 7 cut(s) 112, 177, 406, 1659, 1996, 2122, 2187
BveI ACCTGC 1 cut(s) 274
Cac8I GCNNGC 3 cut(s) 1394, 1956, 2717
CfoI GCGC 2 cut(s) 248, 2003
Cfr10I RCCGGY 1 cut(s) 787
Cfr13I GGNCC 4 cut(s) 1280, 1856, 1864, 2255
CsiI ACCWGGT 1 cut(s) 2668
Csp6I GTAC 9 cut(s) 323, 715, 916, 1538, 1635, 2030, 2058, 2306, 2614
CspCI CAANNNNNGTGG 4 cut(s) 644, 679, 1140, 1175
CviQI GTAC 9 cut(s) 323, 715, 916, 1538, 1635, 2030, 2058, 2306, 2614
DpnI GATC 7 cut(s) 300, 495, 1237, 1416, 1578, 1782, 2281
DpnII GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
Eam1104I CTCTTC 1 cut(s) 368
EarI CTCTTC 1 cut(s) 368
Ecl136II GAGCTC 2 cut(s) 315, 2410
Eco130I CCWWGG 2 cut(s) 1548, 2052
Eco147I AGGCCT 1 cut(s) 2455
Eco24I GRGCYC 2 cut(s) 317, 2412
Eco31I GGTCTC 1 cut(s) 2659
Eco47I GGWCC 4 cut(s) 1280, 1856, 1864, 2255
Eco47III AGCGCT 1 cut(s) 247
Eco53kI GAGCTC 2 cut(s) 315, 2410
Eco57I CTGAAG 2 cut(s) 2280, 2754
Eco91I GGTNACC 1 cut(s) 2516
EcoICRI GAGCTC 2 cut(s) 315, 2410
EcoO109I RGGNCCY 2 cut(s) 1280, 1864
EcoO65I GGTNACC 1 cut(s) 2516
EcoRI GAATTC 6 cut(s) 19, 148, 286, 1018, 1057, 2799
EcoRII CCWGG 7 cut(s) 722, 987, 2140, 2266, 2567, 2668, 2686
EcoT14I CCWWGG 2 cut(s) 1548, 2052
EcoT22I ATGCAT 1 cut(s) 1359
EcoT38I GRGCYC 2 cut(s) 317, 2412
ErhI CCWWGG 2 cut(s) 1548, 2052
Esp3I CGTCTC 1 cut(s) 492
FaqI GGGAC 1 cut(s) 1180
FauI CCCGC 1 cut(s) 1292
FauNDI CATATG 1 cut(s) 136
FbaI TGATCA 2 cut(s) 493, 1576
FblI GTMKAC 2 cut(s) 1457, 1558
Fnu4HI GCNGC 8 cut(s) 244, 807, 1080, 1143, 1299, 1377, 1803, 1917
FriOI GRGCYC 2 cut(s) 317, 2412
Fsp4HI GCNGC 8 cut(s) 244, 807, 1080, 1143, 1299, 1377, 1803, 1917
FspBI CTAG 6 cut(s) 111, 249, 585, 924, 2535, 2850
GlaI GCGC 2 cut(s) 247, 2002
GluI GCNGC 8 cut(s) 244, 807, 1080, 1143, 1299, 1377, 1803, 1917
GsaI CCCAGC 1 cut(s) 2860
GsuI CTGGAG 3 cut(s) 1623, 2495, 2670
HaeII RGCGCY 1 cut(s) 249
HaeIII GGCC 3 cut(s) 1651, 2193, 2455
HapII CCGG 3 cut(s) 318, 788, 2449
HhaI GCGC 2 cut(s) 248, 2003
Hin6I GCGC 2 cut(s) 246, 2001
HinP1I GCGC 2 cut(s) 246, 2001
HincII GTYRAC 1 cut(s) 985
HindII GTYRAC 1 cut(s) 985
HinfI GANTC 9 cut(s) 455, 638, 646, 651, 796, 997, 1127, 1214, 2204
HpaII CCGG 3 cut(s) 318, 788, 2449
HphI GGTGA 6 cut(s) 1035, 1230, 1424, 1425, 2376, 2528
HpyCH4III ACNGT 9 cut(s) 107, 463, 542, 1319, 1556, 1948, 2075, 2117, 2680
HpyCH4IV ACGT 1 cut(s) 2822
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 254, 1034, 1913, 2721
HpySE526I ACGT 1 cut(s) 2822
HspAI GCGC 2 cut(s) 246, 2001
KpnI GGTACC 1 cut(s) 2617
Ksp22I TGATCA 2 cut(s) 493, 1576
Kzo9I GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
LmnI GCTCC 5 cut(s) 320, 1604, 1618, 2476, 2689
Lsp1109I GCAGC 8 cut(s) 255, 818, 1066, 1129, 1310, 1363, 1789, 1903
LweI GCATC 9 cut(s) 278, 289, 1024, 1093, 1363, 1831, 1946, 2392, 2573
MabI ACCWGGT 1 cut(s) 2668
MaeI CTAG 6 cut(s) 111, 249, 585, 924, 2535, 2850
MaeII ACGT 1 cut(s) 2822
MaeIII GTNAC 6 cut(s) 614, 758, 959, 1211, 2516, 2930
MalI GATC 7 cut(s) 300, 495, 1237, 1416, 1578, 1782, 2281
MbiI CCGCTC 2 cut(s) 1015, 1621
MboI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
MfeI CAATTG 2 cut(s) 1331, 2246
MhlI GDGCHC 2 cut(s) 317, 2412
MlyI GAGTC 2 cut(s) 1136, 1208
MmeI TCCRAC 6 cut(s) 361, 499, 680, 881, 2136, 2805
Mph1103I ATGCAT 1 cut(s) 1359
MroXI GAANNNNTTC 1 cut(s) 1947
MseI TTAA 9 cut(s) 44, 173, 575, 783, 824, 1251, 1427, 1709, 1721
MslI CAYNNNNRTG 2 cut(s) 438, 1074
MspA1I CMGCKG 2 cut(s) 809, 1628
MspI CCGG 3 cut(s) 318, 788, 2449
MspR9I CCNGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
MunI CAATTG 2 cut(s) 1331, 2246
Mva1269I GAATGC 2 cut(s) 528, 2747
MvaI CCWGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
MwoI GCNNNNNNNGC 5 cut(s) 116, 254, 1034, 1913, 2721
NdeI CATATG 1 cut(s) 136
NdeII GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
NlaIV GGNNCC 3 cut(s) 1282, 1866, 2615
NmuCI GTSAC 2 cut(s) 1211, 2516
NsiI ATGCAT 1 cut(s) 1359
NspI RCATGY 4 cut(s) 737, 938, 1544, 2931
PaqCI CACCTGC 1 cut(s) 274
PceI AGGCCT 1 cut(s) 2455
PciI ACATGT 4 cut(s) 733, 934, 1540, 2927
PctI GAATGC 2 cut(s) 528, 2747
PdmI GAANNNNTTC 1 cut(s) 1947
PfeI GAWTC 7 cut(s) 455, 638, 646, 651, 796, 997, 2204
PkrI GCNGC 8 cut(s) 245, 808, 1081, 1144, 1300, 1378, 1804, 1918
PleI GAGTC 2 cut(s) 1135, 1208
PpsI GAGTC 2 cut(s) 1135, 1208
PpuMI RGGWCCY 2 cut(s) 1280, 1864
PscI ACATGT 4 cut(s) 733, 934, 1540, 2927
Psp124BI GAGCTC 2 cut(s) 317, 2412
Psp5II RGGWCCY 2 cut(s) 1280, 1864
Psp6I CCWGG 7 cut(s) 722, 987, 2140, 2266, 2567, 2668, 2686
PspEI GGTNACC 1 cut(s) 2516
PspFI CCCAGC 1 cut(s) 2856
PspGI CCWGG 7 cut(s) 722, 987, 2140, 2266, 2567, 2668, 2686
PspN4I GGNNCC 3 cut(s) 1282, 1866, 2615
PspPI GGNCC 4 cut(s) 1280, 1856, 1864, 2255
PspPPI RGGWCCY 2 cut(s) 1280, 1864
PsrI GAACNNNNNNTAC 2 cut(s) 2745, 2777
PstI CTGCAG 1 cut(s) 1381
PvuII CAGCTG 2 cut(s) 809, 1628
RsaI GTAC 9 cut(s) 324, 716, 917, 1539, 1636, 2031, 2059, 2307, 2615
RsaNI GTAC 9 cut(s) 323, 715, 916, 1538, 1635, 2030, 2058, 2306, 2614
RseI CAYNNNNRTG 2 cut(s) 438, 1074
SacI GAGCTC 2 cut(s) 317, 2412
SaqAI TTAA 9 cut(s) 44, 173, 575, 783, 824, 1251, 1427, 1709, 1721
SatI GCNGC 8 cut(s) 244, 807, 1080, 1143, 1299, 1377, 1803, 1917
Sau3AI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2279
Sau96I GGNCC 4 cut(s) 1280, 1856, 1864, 2255
SchI GAGTC 2 cut(s) 1136, 1208
ScrFI CCNGG 7 cut(s) 724, 989, 2142, 2268, 2569, 2670, 2688
SduI GDGCHC 2 cut(s) 317, 2412
SexAI ACCWGGT 1 cut(s) 2668
SfaNI GCATC 9 cut(s) 278, 289, 1024, 1093, 1363, 1831, 1946, 2392, 2573
SfcI CTRYAG 1 cut(s) 1377
SinI GGWCC 4 cut(s) 1280, 1856, 1864, 2255
SmiMI CAYNNNNRTG 2 cut(s) 438, 1074
SmlI CTYRAG 2 cut(s) 1586, 2505
SmoI CTYRAG 2 cut(s) 1586, 2505
SpeI ACTAGT 2 cut(s) 584, 2534
SseBI AGGCCT 1 cut(s) 2455
SsiI CCGC 3 cut(s) 1015, 1285, 1621
SspI AATATT 2 cut(s) 1612, 2042
SspMI CTAG 6 cut(s) 111, 249, 585, 924, 2535, 2850
SstI GAGCTC 2 cut(s) 317, 2412
StuI AGGCCT 1 cut(s) 2455
StyD4I CCNGG 7 cut(s) 722, 987, 2140, 2266, 2567, 2668, 2686
StyI CCWWGG 2 cut(s) 1548, 2052
TaaI ACNGT 9 cut(s) 107, 463, 542, 1319, 1556, 1948, 2075, 2117, 2680
TaiI ACGT 1 cut(s) 2825
TaqI TCGA 3 cut(s) 649, 1055, 1417
TatI WGTACW 4 cut(s) 714, 915, 2029, 2305
TfiI GAWTC 7 cut(s) 455, 638, 646, 651, 796, 997, 2204
Tru1I TTAA 9 cut(s) 44, 173, 575, 783, 824, 1251, 1427, 1709, 1721
Tru9I TTAA 9 cut(s) 44, 173, 575, 783, 824, 1251, 1427, 1709, 1721
TscAI CASTG 7 cut(s) 112, 184, 406, 1659, 2003, 2122, 2194
TseFI GTSAC 2 cut(s) 1211, 2516
TseI GCWGC 8 cut(s) 243, 806, 1079, 1142, 1298, 1376, 1802, 1916
Tsp45I GTSAC 2 cut(s) 1211, 2516
TspGWI ACGGA 2 cut(s) 840, 1211
TspRI CASTG 7 cut(s) 112, 184, 406, 1659, 2003, 2122, 2194
VpaK11BI GGWCC 4 cut(s) 1280, 1856, 1864, 2255
XceI RCATGY 4 cut(s) 737, 938, 1544, 2931
XcmI CCANNNNNNNNNTGG 2 cut(s) 1880, 2324
XmiI GTMKAC 2 cut(s) 1457, 1558
XmnI GAANNNNTTC 1 cut(s) 1947
XspI CTAG 6 cut(s) 111, 249, 585, 924, 2535, 2850
Zsp2I ATGCAT 1 cut(s) 1359
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.