RchiOBHm_Chr2g0161201

Protein of unknown function (DUF789)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0014776
Physical Location & Seq
Forward (+)
77112002 .. 77116803
4802 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ52956

Sequence Viewer

Length: 2946 bp
ATGAGCCAAAGAACTGGGAAAACTGAACCCAATTTTTTGTCTTTAACCACTAAGTTTTGTGATGGAAATATGAACACTAAGTGGGTAGAAAAGTTATCTCAGAACAGTGCTAGTGTAGCCTCTCCGTCTGTGTCATATGGGTATTGGAATTCTGAACCCAATCCTTTATCTTTAAGCACTGGTTTTTGTGATGGAGATTTTGCTGAGAAAAGCAAGAAGTGGGTGGGAAAGTCATCTAAGAGCAGTGCTAGTGTAGCCTCTCCACCTGCAACACATGAGCATCGGAATTCTGAACCCGATCCTCTGTCTTTGAGCTCCGGCATACCTGATGGAAGTATTGCTGAGAAAAAGAAGAAGAAGATGATGAACAAGAAGAGGGTTGGAAAGTCATCTCAGAGCAGTGGTGGTGGTGTAGCCTCTCCATCTGTATCACATGGGAATGAGGTTTCCGAAGATTCAACAGTCCACATTTCCAAGAAACTTTCGTCTCCTGATCATACCCAGTACAGCTTATCAGTTGGAACGCAGAGTTCTGATGACTGTTCAAAGATAAGCAAACAAGGGTCTGATGAATTAAGCAGTACTAGTGTTGTTGAGGATGTTGTAGTTCAGTGTAACAAGCAGGTTGAACTTGAAGATTCCAATAATCGAAGCCACACAGGTTGCACTTACAATGGAAAAGAAAATAGGCATTTTGGTTGGAACAGGAGGCAGTACAATGCCAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATATTAACCCAGCAGAGAATCGTTTTCCGGCTGAGCGTAGCTCATTAGCTAATGATGGTATCTTACCTTATCCATTGATTTCATCTGGATACAACAATGGAAAAGAAAATAGGCATATTGGTTGGAACAGGAAGCAGTACAATGCTAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATGTCAACCTGGCAGAGAATCGTTTTTGGTCTGAGCGGAATTCATTAGCCAATGATGCCATCTCACCTAATCCGTCGAATTCCTCTGGACACAAAAATGCTGCTTATGGATATAGAAAAAGGGATACCTCTCCAAGACTATTGAATGAATCATCACAGGGGGCTGCTTCTCCACAGAGGTTGAATGGGACACTTTTTGTTTCAGTAAAAAGTCAAACGGAAGGCTCGGAAAGTGACTCTGAAAAATTAGTAGGAAGATCACCTAATTCAATTAAGCCTGTGAATTGCAATATGAAAAAAGGACCCCGCAATTATGAAGCAGTCTTCTCTGAGTTACACGGTAAGTGTAAACAATTGTCAATGGGTTGTTTTGATATGCACGATTACAAGAGAGATGCTGCAGGAACAAATGGCAAGCAGATTGCAAGTCATGGTGATCGACACTGTATAACCTCACCTTCCATGTATTCTAAAATGTCTACTCAGGGAGTGATGAATGGTATTCAACAACACAAATTCAGGAAGATACCAAGCATGGAACATGAGTTTGGTAAGTTGGTACATGTATCCTTGGACGGTATACCATGCTTTCATACTGATCATAAACTTGAGAAAGATACTTCTGGAGCAAATATTATGGAGCAGACAGCTGTTGGTACAAAAGAGTTCAGGCCAGTGGACAGAATTTCATCTGCCAGTATCTCCAATGAGTTCAATCTCTTACCAGATTTAAGCAGGGAGTTAAATAATAGCCATCTGGGAGGAAACGCAATATCCTGCAATCAACTGATTTCTTATGATGATCCAGAGGTTTATCAGTCTACTGCTGAAATAGGTCAAAAAATAGAAAGAAAAGGTTATGATGCAAAGAATAGAGGACTAAAGGACCCTGACCAATTTCTAATTGGTTCAAATATGGGAATGAAAGCTCTAAATGCTGCTTACCAAATGCAATTAGCATCTGAAACTGTTCAGCTCGCAATGGGTTGTCCACTTGCAGAGTTTGAAACATTCATCCACTGCGCTGTTCCTGTTATTCCTTCTTCGTCTGTACATAAAGAATATTCTGTTTCCTTGGGTACTCAGCCATCTCACAGTTTACTATCCAAGGACCAGATACCAAATGTATCACTTCACAGTGTTTGGAACTGGTATGAGATACCAGGGAATTATGGGTTGGATGTCAAGGCAGTTTGTCCTAAAACCCTCACTGGCCTTCCAAATGATTCAATGTCATTCCAAGCCTATTTTGTTCCTTCCCTTTCTGCTATTCAATTGTTTGGACCACACATCCCTGGTTGCAAAAGATCATTTTCCAATTCTTCAGAAGCAGTACATCTCAACCATATTCGGGTTGGTTCATTTGATGTTGCCCTACATGATGGAAGTTGTGTTCAAAGTGTGGATTGTTCACCTGTCTTCTCCTCTGATGCTGAGCTCATATTTGAGTTTTTTGAGGTTGAACTGCCACACCACCGGAGGTCTTTTTACAACAAAATTCTGGAGCTAATTGGTGCTGGAACTTCTAATCCTCAAGTATTTGGTGACCCATCAAAGCTCACTAGTCTGAATTTGCCTGATTTACATCCTGCATCCTGGTTTTCGGTGGCTTGGTATCCTATATATCAAATTCCAGAAGGGCACCTACGCGCATCATTCTTGACTTACCATTCACTTGGACATTTTGTTCAGAGACCTGGTTCAACTGTTGCTCCAGGTTGCATTTTCTTCCCTGTGTTAGGCTTGCAAAGCTACAATTCTCAGGATGAATGCTGGTTTGAACCCAAAATACCTTCTTCAGAACCGACATCTTTTGACACCACAGGAATTCTCATAAAAAGGCTCAGGACGTTGGACGAAAATGCTTTACATTTCGCTAGAGGCTGGGTTTACAAGGACAAAGTCATGGTGCAGAACAGACATCCAGATTACGAGTTCTTCACTTCCCGAAAAACACGTTACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF789

Protein Analysis

981

Amino Acids

108.64

Weight (kDa)

8.6

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF789 PF05623 659 - 973 5.6e-56 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014776)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g44320
malus_domestica MD17G1087100.v1.1
prunus_persica Prupe.3G227600_v2.0.a1 Prupe.3G227600_v2.0.a1
pyrus_communis pycom09g02250 pycom17g08430
rosa_chinensis RchiOBHm_Chr2g0161201
rosa_laevigata RLG00000021267
rosa_multiflora Rmu_sc0006420.1_g000047
rosa_roxburghii Rroxscaffold_2G00089030
rosa_rugosa Rorug02G0487000 Rorug02G0487100
rosa_samantha Rh2AG553800 Rh2BG567300 Rh2CG537600 Rh2DG576700
rosa_wichuraiana Rw2G045810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 274
Acc36I ACCTGC 2 cut(s) 274, 613
AccB1I GGYRCC 1 cut(s) 2619
AccBSI CCGCTC 1 cut(s) 1015
AccI GTMKAC 3 cut(s) 1457, 1558, 1799
AccII CGCG 1 cut(s) 2628
AciI CCGC 2 cut(s) 1015, 1285
AclWI GGATC 2 cut(s) 293, 1775
AcuI CTGAAG 2 cut(s) 2286, 2760
AdeI CACNNNGTG 1 cut(s) 81
AfaI GTAC 9 cut(s) 506, 583, 716, 917, 1539, 1636, 2031, 2059, 2313
AfiI CCNNNNNNNGG 2 cut(s) 2329, 2717
AflIII ACRYGT 4 cut(s) 733, 934, 1540, 2933
AhlI ACTAGT 2 cut(s) 584, 2540
AjnI CCWGG 7 cut(s) 722, 987, 2140, 2272, 2573, 2674, 2692
AjuI GAANNNNNNNTTGG 4 cut(s) 1509, 1541, 2138, 2170
AloI GAACNNNNNNTCC 6 cut(s) 2355, 2387, 2491, 2523, 2649, 2681
Alw21I GWGCWC 2 cut(s) 317, 2418
Alw26I GTCTC 2 cut(s) 492, 2665
AlwI GGATC 2 cut(s) 293, 1775
AoxI GGCC 2 cut(s) 1649, 2191
ApeKI GCWGC 4 cut(s) 1079, 1142, 1376, 1916
Asp700I GAANNNNTTC 1 cut(s) 1947
AspLEI GCGC 2 cut(s) 2003, 2630
AspS9I GGNCC 4 cut(s) 1280, 1864, 2089, 2261
AsuHPI GGTGA 6 cut(s) 1035, 1230, 1424, 1425, 2382, 2534
AvaII GGWCC 4 cut(s) 1280, 1864, 2089, 2261
BaeGI GKGCMC 1 cut(s) 2622
BanI GGYRCC 1 cut(s) 2619
BanII GRGCYC 2 cut(s) 317, 2418
BarI GAAGNNNNNNTAC 2 cut(s) 2607, 2639
BbsI GAAGAC 2 cut(s) 1294, 2389
Bbv12I GWGCWC 2 cut(s) 317, 2418
BbvI GCAGC 4 cut(s) 1066, 1129, 1363, 1903
BciT130I CCWGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
BciVI GTATCC 4 cut(s) 860, 1096, 1555, 2604
BclI TGATCA 2 cut(s) 493, 1576
BcoDI GTCTC 2 cut(s) 492, 2665
BcuI ACTAGT 2 cut(s) 584, 2540
BfaI CTAG 6 cut(s) 111, 249, 585, 924, 2541, 2856
BfmI CTRYAG 1 cut(s) 1377
BfuAI ACCTGC 2 cut(s) 274, 613
BfuI GTATCC 4 cut(s) 860, 1096, 1555, 2604
BisI GCNGC 4 cut(s) 1080, 1143, 1377, 1917
BlpI GCTNAGC 2 cut(s) 810, 2412
BlsI GCNGC 4 cut(s) 1081, 1144, 1378, 1918
BmcAI AGTACT 1 cut(s) 583
Bme1390I CCNGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
Bme18I GGWCC 4 cut(s) 1280, 1864, 2089, 2261
BmgT120I GGNCC 4 cut(s) 1280, 1864, 2089, 2261
BmiI GGNNCC 3 cut(s) 1282, 1866, 2621
BmrFI CCNGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
BmrI ACTGGG 2 cut(s) 24, 496
BmsI GCATC 8 cut(s) 289, 1024, 1363, 1831, 1946, 2398, 2579, 2639
BmuI ACTGGG 2 cut(s) 24, 496
BpiI GAAGAC 2 cut(s) 1294, 2389
BplI GAGNNNNNCTC 2 cut(s) 803, 835
BpmI CTGGAG 3 cut(s) 1623, 2501, 2676
Bpu10I CCTNAGC 1 cut(s) 2822
Bpu1102I GCTNAGC 2 cut(s) 810, 2412
BpuEI CTTGAG 2 cut(s) 1607, 2496
BsaBI GATNNNNATC 1 cut(s) 2562
BsaI GGTCTC 1 cut(s) 2665
BsaJI CCNNGG 6 cut(s) 723, 1548, 2052, 2085, 2141, 2272
BsaWI WCCGGW 1 cut(s) 2454
BsaXI ACNNNNNCTCC 2 cut(s) 2674, 2704
Bsc4I CCNNNNNNNGG 2 cut(s) 2329, 2717
Bse1I ACTGG 7 cut(s) 19, 184, 502, 1652, 1674, 2132, 2194
Bse3DI GCAATG 1 cut(s) 1965
Bse8I GATNNNNATC 1 cut(s) 2562
BseBI CCWGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
BseDI CCNNGG 6 cut(s) 723, 1548, 2052, 2085, 2141, 2272
BseGI GGATG 8 cut(s) 604, 1992, 2164, 2268, 2563, 2570, 2749, 2899
BseJI GATNNNNATC 1 cut(s) 2562
BseLI CCNNNNNNNGG 2 cut(s) 2329, 2717
BseMI GCAATG 1 cut(s) 1965
BseNI ACTGG 7 cut(s) 19, 184, 502, 1652, 1674, 2132, 2194
BseRI GAGGAG 1 cut(s) 2392
BseSI GKGCMC 1 cut(s) 2622
BseXI GCAGC 4 cut(s) 1066, 1129, 1363, 1903
BseYI CCCAGC 2 cut(s) 787, 2862
BsgI GTGCAG 1 cut(s) 2909
Bsh1236I CGCG 1 cut(s) 2628
BshFI GGCC 2 cut(s) 1651, 2193
BshNI GGYRCC 1 cut(s) 2619
BsiHKAI GWGCWC 2 cut(s) 317, 2418
BsiSI CCGG 3 cut(s) 318, 806, 2455
BslFI GGGAC 1 cut(s) 1180
BslI CCNNNNNNNGG 2 cut(s) 2329, 2717
BsmAI GTCTC 2 cut(s) 492, 2665
BsmBI CGTCTC 1 cut(s) 492
BsmFI GGGAC 1 cut(s) 1180
BsmI GAATGC 1 cut(s) 2753
BsnI GGCC 2 cut(s) 1651, 2193
Bso31I GGTCTC 1 cut(s) 2665
Bsp1286I GDGCHC 3 cut(s) 317, 2418, 2622
Bsp1407I TGTACA 1 cut(s) 2029
Bsp143I GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
Bsp1720I GCTNAGC 2 cut(s) 810, 2412
BspACI CCGC 2 cut(s) 1015, 1285
BspANI GGCC 2 cut(s) 1651, 2193
BspFNI CGCG 1 cut(s) 2628
BspLI GGNNCC 3 cut(s) 1282, 1866, 2621
BspMAI CTGCAG 1 cut(s) 1381
BspMI ACCTGC 2 cut(s) 274, 613
BspPI GGATC 2 cut(s) 293, 1775
BspT107I GGYRCC 1 cut(s) 2619
BspTNI GGTCTC 1 cut(s) 2665
BsrBI CCGCTC 1 cut(s) 1015
BsrDI GCAATG 1 cut(s) 1965
BsrGI TGTACA 1 cut(s) 2029
BsrI ACTGG 7 cut(s) 19, 184, 502, 1652, 1674, 2132, 2194
BssECI CCNNGG 6 cut(s) 723, 1548, 2052, 2085, 2141, 2272
BssMI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
BssNAI GTATAC 1 cut(s) 1559
BssT1I CCWWGG 3 cut(s) 1548, 2052, 2085
Bst1107I GTATAC 1 cut(s) 1559
Bst2UI CCWGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
Bst6I CTCTTC 1 cut(s) 368
BstAUI TGTACA 1 cut(s) 2029
BstC8I GCNNGC 3 cut(s) 1394, 1956, 2723
BstEII GGTNACC 1 cut(s) 2522
BstENI CCTNNNNNAGG 1 cut(s) 2715
BstF5I GGATG 8 cut(s) 604, 1992, 2164, 2268, 2563, 2570, 2749, 2899
BstFNI CGCG 1 cut(s) 2628
BstHHI GCGC 2 cut(s) 2003, 2630
BstKTI GATC 7 cut(s) 301, 496, 1238, 1417, 1579, 1783, 2288
BstMAI GTCTC 2 cut(s) 492, 2665
BstMBI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
BstMWI GCNNNNNNNGC 5 cut(s) 116, 254, 1034, 1913, 2727
BstNI CCWGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
BstNSI RCATGY 3 cut(s) 737, 938, 1544
BstPI GGTNACC 1 cut(s) 2522
BstSCI CCNGG 7 cut(s) 722, 987, 2140, 2272, 2573, 2674, 2692
BstSFI CTRYAG 1 cut(s) 1377
BstSLI GKGCMC 1 cut(s) 2622
BstUI CGCG 1 cut(s) 2628
BstV1I GCAGC 4 cut(s) 1066, 1129, 1363, 1903
BstV2I GAAGAC 2 cut(s) 1294, 2389
BstXI CCANNNNNNTGG 2 cut(s) 14, 2654
BstZ17I GTATAC 1 cut(s) 1559
BsuI GTATCC 4 cut(s) 860, 1096, 1555, 2604
BsuRI GGCC 2 cut(s) 1651, 2193
BtsCI GGATG 8 cut(s) 604, 1992, 2164, 2268, 2563, 2570, 2749, 2899
BtsI GCAGTG 3 cut(s) 250, 406, 1996
BveI ACCTGC 2 cut(s) 274, 613
Cac8I GCNNGC 3 cut(s) 1394, 1956, 2723
CfoI GCGC 2 cut(s) 2003, 2630
Cfr13I GGNCC 4 cut(s) 1280, 1864, 2089, 2261
CsiI ACCWGGT 1 cut(s) 2674
Csp6I GTAC 9 cut(s) 505, 582, 715, 916, 1538, 1635, 2030, 2058, 2312
CspCI CAANNNNNGTGG 4 cut(s) 644, 679, 1140, 1175
CviQI GTAC 9 cut(s) 505, 582, 715, 916, 1538, 1635, 2030, 2058, 2312
DpnI GATC 7 cut(s) 300, 495, 1237, 1416, 1578, 1782, 2287
DpnII GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
DraIII CACNNNGTG 1 cut(s) 81
Eam1104I CTCTTC 1 cut(s) 368
EarI CTCTTC 1 cut(s) 368
Ecl136II GAGCTC 2 cut(s) 315, 2416
Eco130I CCWWGG 3 cut(s) 1548, 2052, 2085
Eco24I GRGCYC 2 cut(s) 317, 2418
Eco31I GGTCTC 1 cut(s) 2665
Eco47I GGWCC 4 cut(s) 1280, 1864, 2089, 2261
Eco53kI GAGCTC 2 cut(s) 315, 2416
Eco57I CTGAAG 2 cut(s) 2286, 2760
Eco91I GGTNACC 1 cut(s) 2522
EcoICRI GAGCTC 2 cut(s) 315, 2416
EcoNI CCTNNNNNAGG 1 cut(s) 2715
EcoO109I RGGNCCY 2 cut(s) 1280, 1864
EcoO65I GGTNACC 1 cut(s) 2522
EcoRI GAATTC 5 cut(s) 148, 286, 1018, 1057, 2805
EcoRII CCWGG 7 cut(s) 722, 987, 2140, 2272, 2573, 2674, 2692
EcoT14I CCWWGG 3 cut(s) 1548, 2052, 2085
EcoT38I GRGCYC 2 cut(s) 317, 2418
ErhI CCWWGG 3 cut(s) 1548, 2052, 2085
Esp3I CGTCTC 1 cut(s) 492
FaqI GGGAC 1 cut(s) 1180
FauI CCCGC 1 cut(s) 1292
FauNDI CATATG 1 cut(s) 136
FbaI TGATCA 2 cut(s) 493, 1576
FblI GTMKAC 3 cut(s) 1457, 1558, 1799
Fnu4HI GCNGC 4 cut(s) 1080, 1143, 1377, 1917
FokI GGATG 8 cut(s) 611, 1979, 2171, 2255, 2550, 2557, 2756, 2886
FriOI GRGCYC 2 cut(s) 317, 2418
Fsp4HI GCNGC 4 cut(s) 1080, 1143, 1377, 1917
FspBI CTAG 6 cut(s) 111, 249, 585, 924, 2541, 2856
GlaI GCGC 2 cut(s) 2002, 2629
GluI GCNGC 4 cut(s) 1080, 1143, 1377, 1917
GsaI CCCAGC 2 cut(s) 791, 2866
GsuI CTGGAG 3 cut(s) 1623, 2501, 2676
HaeIII GGCC 2 cut(s) 1651, 2193
HapII CCGG 3 cut(s) 318, 806, 2455
HhaI GCGC 2 cut(s) 2003, 2630
Hin6I GCGC 2 cut(s) 2001, 2628
HinP1I GCGC 2 cut(s) 2001, 2628
HincII GTYRAC 1 cut(s) 985
HindII GTYRAC 1 cut(s) 985
HinfI GANTC 7 cut(s) 455, 638, 796, 997, 1127, 1214, 2204
HpaII CCGG 3 cut(s) 318, 806, 2455
HphI GGTGA 6 cut(s) 1035, 1230, 1424, 1425, 2382, 2534
Hpy99I CGWCG 1 cut(s) 1057
HpyAV CCTTC 9 cut(s) 722, 923, 1193, 1446, 2028, 2204, 2244, 2609, 2781
HpyCH4IV ACGT 2 cut(s) 2828, 2935
HpyF10VI GCNNNNNNNGC 5 cut(s) 116, 254, 1034, 1913, 2727
HpySE526I ACGT 2 cut(s) 2828, 2935
HspAI GCGC 2 cut(s) 2001, 2628
Ksp22I TGATCA 2 cut(s) 493, 1576
Kzo9I GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
LmnI GCTCC 5 cut(s) 320, 1604, 1618, 2482, 2695
Lsp1109I GCAGC 4 cut(s) 1066, 1129, 1363, 1903
LweI GCATC 8 cut(s) 289, 1024, 1363, 1831, 1946, 2398, 2579, 2639
MabI ACCWGGT 1 cut(s) 2674
MaeI CTAG 6 cut(s) 111, 249, 585, 924, 2541, 2856
MaeII ACGT 2 cut(s) 2828, 2935
MaeIII GTNAC 7 cut(s) 614, 758, 959, 1211, 1311, 2522, 2936
MalI GATC 7 cut(s) 300, 495, 1237, 1416, 1578, 1782, 2287
MbiI CCGCTC 1 cut(s) 1015
MboI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
MfeI CAATTG 2 cut(s) 1331, 2252
MhlI GDGCHC 3 cut(s) 317, 2418, 2622
MlyI GAGTC 1 cut(s) 1208
MmeI TCCRAC 6 cut(s) 361, 499, 680, 881, 2136, 2811
MroXI GAANNNNTTC 1 cut(s) 1947
MseI TTAA 7 cut(s) 44, 173, 575, 783, 1251, 1709, 1721
MslI CAYNNNNRTG 2 cut(s) 438, 1074
MspA1I CMGCKG 1 cut(s) 1628
MspI CCGG 3 cut(s) 318, 806, 2455
MspR9I CCNGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
MunI CAATTG 2 cut(s) 1331, 2252
Mva1269I GAATGC 1 cut(s) 2753
MvaI CCWGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
MvnI CGCG 1 cut(s) 2628
MwoI GCNNNNNNNGC 5 cut(s) 116, 254, 1034, 1913, 2727
NdeI CATATG 1 cut(s) 136
NdeII GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
NlaIV GGNNCC 3 cut(s) 1282, 1866, 2621
NmuCI GTSAC 2 cut(s) 1211, 2522
NspI RCATGY 3 cut(s) 737, 938, 1544
PaqCI CACCTGC 1 cut(s) 274
PciI ACATGT 3 cut(s) 733, 934, 1540
PctI GAATGC 1 cut(s) 2753
PdmI GAANNNNTTC 1 cut(s) 1947
PfeI GAWTC 6 cut(s) 455, 638, 796, 997, 1127, 2204
PflFI GACNNNGTC 1 cut(s) 2879
PkrI GCNGC 4 cut(s) 1081, 1144, 1378, 1918
PleI GAGTC 1 cut(s) 1208
PpsI GAGTC 1 cut(s) 1208
PpuMI RGGWCCY 2 cut(s) 1280, 1864
PscI ACATGT 3 cut(s) 733, 934, 1540
Psp124BI GAGCTC 2 cut(s) 317, 2418
Psp5II RGGWCCY 2 cut(s) 1280, 1864
Psp6I CCWGG 7 cut(s) 722, 987, 2140, 2272, 2573, 2674, 2692
PspEI GGTNACC 1 cut(s) 2522
PspFI CCCAGC 2 cut(s) 787, 2862
PspGI CCWGG 7 cut(s) 722, 987, 2140, 2272, 2573, 2674, 2692
PspN4I GGNNCC 3 cut(s) 1282, 1866, 2621
PspPI GGNCC 4 cut(s) 1280, 1864, 2089, 2261
PspPPI RGGWCCY 2 cut(s) 1280, 1864
PsrI GAACNNNNNNTAC 2 cut(s) 2751, 2783
PstI CTGCAG 1 cut(s) 1381
PsyI GACNNNGTC 1 cut(s) 2879
PvuII CAGCTG 1 cut(s) 1628
RsaI GTAC 9 cut(s) 506, 583, 716, 917, 1539, 1636, 2031, 2059, 2313
RsaNI GTAC 9 cut(s) 505, 582, 715, 916, 1538, 1635, 2030, 2058, 2312
RseI CAYNNNNRTG 2 cut(s) 438, 1074
SacI GAGCTC 2 cut(s) 317, 2418
SaqAI TTAA 7 cut(s) 44, 173, 575, 783, 1251, 1709, 1721
SatI GCNGC 4 cut(s) 1080, 1143, 1377, 1917
Sau3AI GATC 7 cut(s) 298, 493, 1235, 1414, 1576, 1780, 2285
Sau96I GGNCC 4 cut(s) 1280, 1864, 2089, 2261
ScaI AGTACT 1 cut(s) 583
SchI GAGTC 1 cut(s) 1208
ScrFI CCNGG 7 cut(s) 724, 989, 2142, 2274, 2575, 2676, 2694
SduI GDGCHC 3 cut(s) 317, 2418, 2622
SexAI ACCWGGT 1 cut(s) 2674
SfaNI GCATC 8 cut(s) 289, 1024, 1363, 1831, 1946, 2398, 2579, 2639
SfcI CTRYAG 1 cut(s) 1377
SinI GGWCC 4 cut(s) 1280, 1864, 2089, 2261
SmiMI CAYNNNNRTG 2 cut(s) 438, 1074
SmlI CTYRAG 2 cut(s) 1586, 2511
SmoI CTYRAG 2 cut(s) 1586, 2511
SpeI ACTAGT 2 cut(s) 584, 2540
SsiI CCGC 2 cut(s) 1015, 1285
SspI AATATT 2 cut(s) 1612, 2042
SspMI CTAG 6 cut(s) 111, 249, 585, 924, 2541, 2856
SstI GAGCTC 2 cut(s) 317, 2418
StyD4I CCNGG 7 cut(s) 722, 987, 2140, 2272, 2573, 2674, 2692
StyI CCWWGG 3 cut(s) 1548, 2052, 2085
TaiI ACGT 2 cut(s) 2831, 2938
TaqI TCGA 3 cut(s) 649, 1055, 1417
TatI WGTACW 6 cut(s) 504, 581, 714, 915, 2029, 2311
TfiI GAWTC 6 cut(s) 455, 638, 796, 997, 1127, 2204
Tru1I TTAA 7 cut(s) 44, 173, 575, 783, 1251, 1709, 1721
Tru9I TTAA 7 cut(s) 44, 173, 575, 783, 1251, 1709, 1721
TseFI GTSAC 2 cut(s) 1211, 2522
TseI GCWGC 4 cut(s) 1079, 1142, 1376, 1916
Tsp45I GTSAC 2 cut(s) 1211, 2522
TspGWI ACGGA 3 cut(s) 114, 1041, 1211
Tth111I GACNNNGTC 1 cut(s) 2879
VpaK11BI GGWCC 4 cut(s) 1280, 1864, 2089, 2261
XagI CCTNNNNNAGG 1 cut(s) 2715
XceI RCATGY 3 cut(s) 737, 938, 1544
XcmI CCANNNNNNNNNTGG 2 cut(s) 1880, 2330
XmiI GTMKAC 3 cut(s) 1457, 1558, 1799
XmnI GAANNNNTTC 1 cut(s) 1947
XspI CTAG 6 cut(s) 111, 249, 585, 924, 2541, 2856
ZrmI AGTACT 1 cut(s) 583
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.