Rh2BG567300

Protein of unknown function (DUF789)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
78217782 .. 78229700
11919 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG567300.1

Sequence Viewer

Length: 4047 bp
ATGGGTTTTTCTTCAAGTTTTGATCTAGGCTCGGAGTTTGATGAAGGAGCTAGAATTGGGTTCAACACTGTTACAAACCAAACCCAAGTCCTGACTTCATGGAAGAATTCTGATGATCCTGCACCGGGTCTTTTCTCTCTTGAGCTTGACCCGAATGGAAGCGATGCATACTTCATACTGTGGAATAGGTCTATTCGGTATTGGACTAGTGGAGCTTGGGATCCAAAGAGTCGTATTTTCAGTTTGGTTCCTGAGATGAGGCTTAACTATATCTACAACTTCAGCTATGTTAAAAACAAAAATGAGAGCTACTTCACCTATTCTGTTTATGATCCTAGCATCACATCTCGATTCATAATGGATGTATCGGGTCAGATTAAGCAACGATCCTGGTTGAAATCTCAGGGATGGAACTTGTTTTGGTCTCAACCAAGGAAACAATGTGAGGTTTATGCTTATTGTGGGGCATTTGGCAGTTGCAATGAGAATTCTTTGCCCTTCTGTAATTGTTTGAATGGTTTTGAGCCGAAATTGAAGATGGATTGGGATTTGCAGGATTATTCTGGTGGCTGCAACAGACGGACTACGCTGAATTGTGGGAATGGTACCAATGGAAGACGAAACTCTGAGCCATCTGAAGACGGCAAAGTTAGATTCTTCCCAAGTTGGGCTGCTGGCGTGATCACGAGTAACGAAGAAGGCGATGTGCTGAGCCTATTGGACCCGAAATTAGGGAGAAACGGTGATGTGGAAGAGATCATGAGGGTTCTTAGAGTTGCTTGCTGGTGTGTCCAAGATGATGAGGCTCATAGACCATCAATGGGTCAAGTGGTGCAGATTCTCGAGGGGGTTTTGAATGTGAACTTGCCCTCAGTTCCAAGATCACTCCAACTCTTTGGAGATGGCCAGGACATAGTTTTCTTCACAGAGTCATCTTCAAGCCAGAGCTCACATGCACCAAAAGCGGAGCCCTCTGAACCTCAGAACCCCCAGAAACCGAAAACCCAAAACCCCAAGGCACTTAATTCTTGGTTCTTCAAGCTCTGCAATCTTGCTCAGGTGTTTGGGGAGATTTGTTTGAACGATACGAAGGAACAGAAAATGAGCCAAAGAACTGGGAAAACTGAACCCAATTTTTCGTCTTTAACCACTAAGTTTTGTGATGGAAATATGAACACTAAGTGGGTAGAAAAGTTATCTCAGAACAGTGCTAGTGTAGCCTCTCCATCTGTGTCATATGGGTATTGGAATTCTGAACCCAATCCTTTATCTTTAAGCACTGGTTTTTGTGATGGAGATTTTGCTGAGAAAAGCAAGAAGTGGGTGGGAAAGTCATCTAAGAGCAGTGCTAGTGTAGCCTCTCCACCTGCAACACATGAGCATCGGAATTCTGAACCCGATCCTCTGTCTTTGAGCTCCGGCATACCTGATGGAAGTATTGCTGAGAAAAAGAAGAAGAAGATGATGAACAAGAAGAGGGTTGGAAAGTCATCTCAGAGCAGTGGAGGTGGTGTAGCCTCTCCATCTGTATCACATGGGAATGAGGTTTCCGAAGATTCAACGGTCCACATTTCCAAGAAACTTTCGTCTCCTGATCATACCCAGTACAGCTTATCAGTTGGAATGCAGAGTTCTGATGACTGTTCAAAGATAAGCAAACAAGGGTCTGATGAATTAAGCAGTACTAGTGTTGTTGAGGATGTTGTAGTTCAGTGTAACAAACAGGTTGAACTTGAAGCTTCCAATAATCGAAGCCACACAGGTTGCACTTACAATGGAAAAGAAAATAGGCATTTTGGTTGGAACAGGAGGCAGTACAATGCCAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATATTAACCCAGCAGAGAATCGTTTTGCAGCTGAGCGTAGCTCATTAGCTAATGATGGTATCTTACCTTATCCATTGATGTCATCTGGATACAACAATGGAAAAGAAAATAGGCATATTGGTTGGAACAGGAAGCAGTACAATGCTAGGGAAGGACATGTGAATTGGGGGAAGAAACCAAGTTACAGAAATGGTGTGAAAGATGTCAACCTGGCAGAGAATCGTTTTTGGTCTGAGCGGAATTCATTAGCCAATGATGCCATCTCACCTAATCCGTCGAATTCCTCTGGACACAAAAATGCTGCTTATGGATATAGAAAAAGGGATACCCCTCCAAGACTATTGAATGAATCATCACAGGGGGCTGCTTCTCCACAGAGGTTGAATGGGACACTTTTTGTTTCAGTAAAAAGTCAAACGGAAGGCTCGGAAAGTGACTCTGAAAAATTAGTAGGAAGATCACGTAATTCAATTAAGCCTGTGAATTGCAATATGAAAAAAGGACCCCGCAATTATGAAGCAGTCTTCTCTGAGTTACACGGTAAGTGTAAACAATTGTCAATGGGTTGTTTTGATATGCACGATTACAAGAGAGATGCTGCAGGAACAAATGGCAAGCAGATTGCAAGTCATGGTGATCGACACTGTATAACCTCACCTTCCATGTATTCTAAAATGTCTACTCAGGGAGTGATGAATGGTATTCAACAACACAAATTCAGGAAGATACCAAGCATGGAACATGAGTTTGGTAAGTTGGTACATGTATCCTTGGACGGTATACCATGCTTTCATACTGATCATAAACTTGAGAAAGATACTTCTGGAGCAAATATTATGGAGCAGACAGCTGTTGGTACAAAAGAGTTCAGGCCAGTGGACAGAATTTCATCTGCCAGTATCTCCAATGAGTTCAATCTCTTACCAGATTTAAGCAGGGAGTTAAATAATAGCCATCTGGGAGGAAACGCAATATCCTGCAATCAACTGATTTCTTATGATGATCCAAAGGTTTATCAGTCTACTGCTGAAATAGGTAAAAAAATAGAAAGAAAAGGTTATGATGCAAAGAATAGAGGACTAAAGGACCCTGACCAATTTCTAATTGGTTCAAATATGGGAATGAAAGCTCTAAATGCTGCTTACCAAATGCAATTAGCATCTGAAACTGTTCAGCTCGCAATGGGTTGCCCACTTGCAGAGTTTGAAACATTCATCCACTGCGCTGTTCCTGTTATTCCTTCTTCGTCTGTACATAAAGAATATTCTGTTTCCTTGGGTACTCAGCCATCTCACAGTTTACTATCCAAGGACCAGATACCAAATGTATCACTTCACAGTGTTTGGAACTGGTATGAGATACCAGGGAATTATGGGTTGGATGTCAAGGCAGTTTGTCCTAAAACCCTCACTGGCCTTCCAAATGATTCAATGTCATTCCAAGCCTATTTTGTTCCTTCCCTTTCTGCTATTCAATTGTTTGGACCACACATCCCTGGTTGCAAAAGATCATTTTCCAATTCTTCAGAAGCAGTACATCTCAACCATATTCGGGTTGGTTCATTTGATGTTGCCCTACATGATGGAAGTTGTGTTCAAAGTCTGGATTGTTCACCTGTCTTCTCCTCTGATGCTGAGCTCATATTTGAGTTTTTTGAGGTTGAACTGCCACACCACCGGAGGTCTTTTTACAACAAAATTCTGGAGCTAATTGGTGCTGGAACTTCTAATCCTCAAGTATTTGGTGACCCATCAAAGCTCACTAGTCTGAATTTGCCTGATTTACATCCTGCATCCTGGTTTTCGGTGGCTTGGTATCCTATATATCAAATTCCAGAAGGGCACCTACGCGCATCATTCTTGACTTACCATTCACTTGGACATTTTGTTCAGAGACCTGGTTCAACTGTTGCTCCAGGTTGCATTTTCTTCCCTGTGTTAGGCTTGCAAAGCTACAATTCTCAGGATGAATGCTGGTTTGAACCCAAAATACCTTCTTCAGAACCGACATCTTTTGACACCACAGGAATTCTCATAAAAAGGCTCAGGACGTTGGACGAAAATGCTTTACATTTCGCTAGAGGCTGGGTTTACAAGGACAAAGTCATGGTGCAGAACAGACATCCAGATTACGAGTTCTTCACTTCCCGAAAAACACGTTACAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1348

Amino Acids

150.13

Weight (kDa)

8.34

Isoelectric Point (pI)

44.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
S_locus_glycop PF00954 68 - 177 8.5e-30 S-locus glycoprotein domain
DUF789 PF05623 1026 - 1340 1.2e-55 Protein of unknown function (DUF789)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0014776)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1375
Acc36I ACCTGC 1 cut(s) 1375
Acc65I GGTACC 1 cut(s) 605
AccB1I GGYRCC 2 cut(s) 605, 3720
AccBSI CCGCTC 1 cut(s) 2116
AccI GTMKAC 3 cut(s) 2558, 2659, 2900
AccII CGCG 1 cut(s) 3729
AciI CCGC 3 cut(s) 965, 2116, 2386
AclWI GGATC 7 cut(s) 110, 215, 228, 326, 381, 1394, 2876
AcoI YGGCCR 1 cut(s) 904
AcuI CTGAAG 4 cut(s) 265, 657, 3387, 3861
AdeI CACNNNGTG 1 cut(s) 1182
AfiI CCNNNNNNNGG 6 cut(s) 125, 667, 731, 821, 3430, 3818
AflIII ACRYGT 4 cut(s) 1834, 2035, 2641, 4034
AhlI ACTAGT 3 cut(s) 206, 1685, 3641
AjnI CCWGG 9 cut(s) 389, 906, 1823, 2088, 3241, 3373, 3674, 3775, 3793
AjuI GAANNNNNNNTTGG 4 cut(s) 2610, 2642, 3239, 3271
AloI GAACNNNNNNTCC 6 cut(s) 3456, 3488, 3592, 3624, 3750, 3782
Alw21I GWGCWC 3 cut(s) 950, 1418, 3519
Alw26I GTCTC 3 cut(s) 429, 1593, 3766
AlwI GGATC 7 cut(s) 110, 215, 228, 326, 381, 1394, 2876
Ama87I CYCGRG 1 cut(s) 842
AoxI GGCC 3 cut(s) 904, 2750, 3292
ApeKI GCWGC 7 cut(s) 570, 671, 1907, 2180, 2243, 2477, 3017
Asp700I GAANNNNTTC 1 cut(s) 3048
Asp718I GGTACC 1 cut(s) 605
AspLEI GCGC 2 cut(s) 3104, 3731
AspS9I GGNCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
AsuC2I CCSGG 1 cut(s) 126
AsuHPI GGTGA 7 cut(s) 307, 755, 2136, 2525, 2526, 3483, 3635
AvaI CYCGRG 1 cut(s) 842
AvaII GGWCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
BaeGI GKGCMC 1 cut(s) 3723
BalI TGGCCA 1 cut(s) 906
BamHI GGATCC 1 cut(s) 220
BanI GGYRCC 2 cut(s) 605, 3720
BanII GRGCYC 4 cut(s) 950, 972, 1418, 3519
BarI GAAGNNNNNNTAC 2 cut(s) 3708, 3740
BauI CACGAG 1 cut(s) 685
BbsI GAAGAC 4 cut(s) 622, 645, 2395, 3490
Bbv12I GWGCWC 3 cut(s) 950, 1418, 3519
BbvI GCAGC 7 cut(s) 557, 658, 1919, 2167, 2230, 2464, 3004
BceAI ACGGC 1 cut(s) 658
BciT130I CCWGG 9 cut(s) 391, 908, 1825, 2090, 3243, 3375, 3676, 3777, 3795
BciVI GTATCC 4 cut(s) 1961, 2197, 2656, 3705
BclI TGATCA 3 cut(s) 681, 1594, 2677
BcnI CCSGG 1 cut(s) 126
BcoDI GTCTC 3 cut(s) 429, 1593, 3766
BcuI ACTAGT 3 cut(s) 206, 1685, 3641
BfmI CTRYAG 1 cut(s) 2478
BfuAI ACCTGC 1 cut(s) 1375
BfuI GTATCC 4 cut(s) 1961, 2197, 2656, 3705
BisI GCNGC 7 cut(s) 571, 672, 1908, 2181, 2244, 2478, 3018
BlpI GCTNAGC 3 cut(s) 710, 1911, 3513
BlsI GCNGC 7 cut(s) 572, 673, 1909, 2182, 2245, 2479, 3019
BmcAI AGTACT 1 cut(s) 1684
Bme18I GGWCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
BmeT110I CYCGRG 1 cut(s) 842
BmgT120I GGNCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
BmiI GGNNCC 8 cut(s) 222, 249, 607, 723, 969, 2383, 2967, 3722
BmrI ACTGGG 2 cut(s) 1125, 1597
BmuI ACTGGG 2 cut(s) 1125, 1597
BpiI GAAGAC 4 cut(s) 622, 645, 2395, 3490
BplI GAGNNNNNCTC 2 cut(s) 1904, 1936
BpmI CTGGAG 3 cut(s) 2724, 3602, 3777
Bpu10I CCTNAGC 2 cut(s) 1056, 3923
Bpu1102I GCTNAGC 3 cut(s) 710, 1911, 3513
BpuEI CTTGAG 3 cut(s) 161, 2708, 3597
BpuMI CCSGG 1 cut(s) 126
BsaAI YACGTR 1 cut(s) 2342
BsaBI GATNNNNATC 1 cut(s) 3663
BsaI GGTCTC 2 cut(s) 429, 3766
BsaJI CCNNGG 8 cut(s) 431, 1014, 1824, 2649, 3153, 3186, 3242, 3373
BsaWI WCCGGW 1 cut(s) 3555
BsaXI ACNNNNNCTCC 6 cut(s) 727, 757, 1497, 1527, 3775, 3805
Bsc4I CCNNNNNNNGG 6 cut(s) 125, 667, 731, 821, 3430, 3818
Bse1I ACTGG 7 cut(s) 1120, 1285, 1603, 2753, 2775, 3233, 3295
Bse3DI GCAATG 2 cut(s) 487, 3066
Bse8I GATNNNNATC 1 cut(s) 3663
BseBI CCWGG 9 cut(s) 391, 908, 1825, 2090, 3243, 3375, 3676, 3777, 3795
BseDI CCNNGG 8 cut(s) 431, 1014, 1824, 2649, 3153, 3186, 3242, 3373
BseJI GATNNNNATC 1 cut(s) 3663
BseLI CCNNNNNNNGG 6 cut(s) 125, 667, 731, 821, 3430, 3818
BseMI GCAATG 2 cut(s) 487, 3066
BseNI ACTGG 7 cut(s) 1120, 1285, 1603, 2753, 2775, 3233, 3295
BseRI GAGGAG 1 cut(s) 3493
BseSI GKGCMC 1 cut(s) 3723
BseXI GCAGC 7 cut(s) 557, 658, 1919, 2167, 2230, 2464, 3004
BseYI CCCAGC 2 cut(s) 1888, 3963
BsgI GTGCAG 3 cut(s) 105, 854, 4010
Bsh1236I CGCG 1 cut(s) 3729
BshFI GGCC 3 cut(s) 906, 2752, 3294
BshNI GGYRCC 2 cut(s) 605, 3720
BsiHKAI GWGCWC 3 cut(s) 950, 1418, 3519
BsiHKCI CYCGRG 1 cut(s) 842
BsiSI CCGG 3 cut(s) 125, 1419, 3556
BslFI GGGAC 1 cut(s) 2281
BslI CCNNNNNNNGG 6 cut(s) 125, 667, 731, 821, 3430, 3818
BsmAI GTCTC 3 cut(s) 429, 1593, 3766
BsmBI CGTCTC 1 cut(s) 1593
BsmFI GGGAC 1 cut(s) 2281
BsmI GAATGC 2 cut(s) 1629, 3854
BsnI GGCC 3 cut(s) 906, 2752, 3294
Bso31I GGTCTC 2 cut(s) 429, 3766
BsoBI CYCGRG 1 cut(s) 842
Bsp1286I GDGCHC 5 cut(s) 950, 972, 1418, 3519, 3723
Bsp1407I TGTACA 1 cut(s) 3130
Bsp1720I GCTNAGC 3 cut(s) 710, 1911, 3513
BspACI CCGC 3 cut(s) 965, 2116, 2386
BspANI GGCC 3 cut(s) 906, 2752, 3294
BspFNI CGCG 1 cut(s) 3729
BspHI TCATGA 1 cut(s) 759
BspLI GGNNCC 8 cut(s) 222, 249, 607, 723, 969, 2383, 2967, 3722
BspMAI CTGCAG 1 cut(s) 2482
BspMI ACCTGC 1 cut(s) 1375
BspPI GGATC 7 cut(s) 110, 215, 228, 326, 381, 1394, 2876
BspT107I GGYRCC 2 cut(s) 605, 3720
BspTNI GGTCTC 2 cut(s) 429, 3766
BsrBI CCGCTC 1 cut(s) 2116
BsrDI GCAATG 2 cut(s) 487, 3066
BsrGI TGTACA 1 cut(s) 3130
BsrI ACTGG 7 cut(s) 1120, 1285, 1603, 2753, 2775, 3233, 3295
BssECI CCNNGG 8 cut(s) 431, 1014, 1824, 2649, 3153, 3186, 3242, 3373
BssNAI GTATAC 1 cut(s) 2660
BssSI CACGAG 1 cut(s) 685
BssT1I CCWWGG 5 cut(s) 431, 1014, 2649, 3153, 3186
Bst1107I GTATAC 1 cut(s) 2660
Bst2BI CACGAG 1 cut(s) 685
Bst2UI CCWGG 9 cut(s) 391, 908, 1825, 2090, 3243, 3375, 3676, 3777, 3795
Bst6I CTCTTC 2 cut(s) 747, 1469
BstAUI TGTACA 1 cut(s) 3130
BstBAI YACGTR 1 cut(s) 2342
BstC8I GCNNGC 5 cut(s) 676, 781, 2495, 3057, 3824
BstEII GGTNACC 1 cut(s) 3623
BstENI CCTNNNNNAGG 1 cut(s) 3816
BstFNI CGCG 1 cut(s) 3729
BstHHI GCGC 2 cut(s) 3104, 3731
BstMAI GTCTC 3 cut(s) 429, 1593, 3766
BstMWI GCNNNNNNNGC 6 cut(s) 962, 1217, 1355, 2135, 3014, 3828
BstNI CCWGG 9 cut(s) 391, 908, 1825, 2090, 3243, 3375, 3676, 3777, 3795
BstNSI RCATGY 4 cut(s) 956, 1838, 2039, 2645
BstPI GGTNACC 1 cut(s) 3623
BstSFI CTRYAG 1 cut(s) 2478
BstSLI GKGCMC 1 cut(s) 3723
BstUI CGCG 1 cut(s) 3729
BstV1I GCAGC 7 cut(s) 557, 658, 1919, 2167, 2230, 2464, 3004
BstV2I GAAGAC 4 cut(s) 622, 645, 2395, 3490
BstX2I RGATCY 1 cut(s) 220
BstXI CCANNNNNNTGG 3 cut(s) 896, 1115, 3755
BstYI RGATCY 1 cut(s) 220
BstZ17I GTATAC 1 cut(s) 2660
BsuI GTATCC 4 cut(s) 1961, 2197, 2656, 3705
BsuRI GGCC 3 cut(s) 906, 2752, 3294
BtgZI GCGATG 2 cut(s) 177, 717
BtsI GCAGTG 3 cut(s) 1351, 1507, 3097
BveI ACCTGC 1 cut(s) 1375
Cac8I GCNNGC 5 cut(s) 676, 781, 2495, 3057, 3824
CciI TCATGA 1 cut(s) 759
CfoI GCGC 2 cut(s) 3104, 3731
Cfr13I GGNCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
CsiI ACCWGGT 1 cut(s) 3775
CspCI CAANNNNNGTGG 4 cut(s) 1745, 1780, 2241, 2276
DraIII CACNNNGTG 1 cut(s) 1182
EaeI YGGCCR 1 cut(s) 904
Eam1104I CTCTTC 2 cut(s) 747, 1469
EarI CTCTTC 2 cut(s) 747, 1469
Ecl136II GAGCTC 3 cut(s) 948, 1416, 3517
Eco130I CCWWGG 5 cut(s) 431, 1014, 2649, 3153, 3186
Eco24I GRGCYC 4 cut(s) 950, 972, 1418, 3519
Eco31I GGTCTC 2 cut(s) 429, 3766
Eco47I GGWCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
Eco53kI GAGCTC 3 cut(s) 948, 1416, 3517
Eco57I CTGAAG 4 cut(s) 265, 657, 3387, 3861
Eco88I CYCGRG 1 cut(s) 842
Eco91I GGTNACC 1 cut(s) 3623
EcoICRI GAGCTC 3 cut(s) 948, 1416, 3517
EcoNI CCTNNNNNAGG 1 cut(s) 3816
EcoO109I RGGNCCY 2 cut(s) 2381, 2965
EcoO65I GGTNACC 1 cut(s) 3623
EcoRI GAATTC 7 cut(s) 106, 487, 1249, 1387, 2119, 2158, 3906
EcoRII CCWGG 9 cut(s) 389, 906, 1823, 2088, 3241, 3373, 3674, 3775, 3793
EcoT14I CCWWGG 5 cut(s) 431, 1014, 2649, 3153, 3186
EcoT22I ATGCAT 1 cut(s) 169
EcoT38I GRGCYC 4 cut(s) 950, 972, 1418, 3519
ErhI CCWWGG 5 cut(s) 431, 1014, 2649, 3153, 3186
Esp3I CGTCTC 1 cut(s) 1593
FaqI GGGAC 1 cut(s) 2281
FauI CCCGC 1 cut(s) 2393
FauNDI CATATG 1 cut(s) 1237
FbaI TGATCA 3 cut(s) 681, 1594, 2677
FblI GTMKAC 3 cut(s) 2558, 2659, 2900
Fnu4HI GCNGC 7 cut(s) 571, 672, 1908, 2181, 2244, 2478, 3018
FriOI GRGCYC 4 cut(s) 950, 972, 1418, 3519
Fsp4HI GCNGC 7 cut(s) 571, 672, 1908, 2181, 2244, 2478, 3018
GlaI GCGC 2 cut(s) 3103, 3730
GluI GCNGC 7 cut(s) 571, 672, 1908, 2181, 2244, 2478, 3018
GsaI CCCAGC 2 cut(s) 1892, 3967
GsuI CTGGAG 3 cut(s) 2724, 3602, 3777
HaeIII GGCC 3 cut(s) 906, 2752, 3294
HapII CCGG 3 cut(s) 125, 1419, 3556
HhaI GCGC 2 cut(s) 3104, 3731
Hin6I GCGC 2 cut(s) 3102, 3729
HinP1I GCGC 2 cut(s) 3102, 3729
HincII GTYRAC 1 cut(s) 2086
HindII GTYRAC 1 cut(s) 2086
HindIII AAGCTT 1 cut(s) 1737
HpaII CCGG 3 cut(s) 125, 1419, 3556
HphI GGTGA 7 cut(s) 307, 755, 2136, 2525, 2526, 3483, 3635
Hpy99I CGWCG 1 cut(s) 2158
HpyCH4IV ACGT 3 cut(s) 2341, 3929, 4036
HpyF10VI GCNNNNNNNGC 6 cut(s) 962, 1217, 1355, 2135, 3014, 3828
HpySE526I ACGT 3 cut(s) 2341, 3929, 4036
HspAI GCGC 2 cut(s) 3102, 3729
KpnI GGTACC 1 cut(s) 609
Ksp22I TGATCA 3 cut(s) 681, 1594, 2677
LmnI GCTCC 8 cut(s) 47, 212, 967, 1421, 2705, 2719, 3583, 3796
Lsp1109I GCAGC 7 cut(s) 557, 658, 1919, 2167, 2230, 2464, 3004
MabI ACCWGGT 1 cut(s) 3775
MaeII ACGT 3 cut(s) 2341, 3929, 4036
MaeIII GTNAC 9 cut(s) 70, 689, 1715, 1859, 2060, 2312, 2412, 3623, 4037
MbiI CCGCTC 1 cut(s) 2116
MfeI CAATTG 2 cut(s) 2432, 3353
MflI RGATCY 1 cut(s) 220
MhlI GDGCHC 5 cut(s) 950, 972, 1418, 3519, 3723
MlsI TGGCCA 1 cut(s) 906
MluNI TGGCCA 1 cut(s) 906
MlyI GAGTC 3 cut(s) 238, 938, 2309
MmeI TCCRAC 7 cut(s) 913, 1462, 1600, 1781, 1982, 3237, 3912
Mox20I TGGCCA 1 cut(s) 906
Mph1103I ATGCAT 1 cut(s) 169
MroXI GAANNNNTTC 1 cut(s) 3048
MscI TGGCCA 1 cut(s) 906
MslI CAYNNNNRTG 2 cut(s) 1539, 2175
Msp20I TGGCCA 1 cut(s) 906
MspA1I CMGCKG 2 cut(s) 1910, 2729
MspI CCGG 3 cut(s) 125, 1419, 3556
MunI CAATTG 2 cut(s) 2432, 3353
Mva1269I GAATGC 2 cut(s) 1629, 3854
MvaI CCWGG 9 cut(s) 391, 908, 1825, 2090, 3243, 3375, 3676, 3777, 3795
MvnI CGCG 1 cut(s) 3729
MwoI GCNNNNNNNGC 6 cut(s) 962, 1217, 1355, 2135, 3014, 3828
NciI CCSGG 1 cut(s) 126
NdeI CATATG 1 cut(s) 1237
NlaIV GGNNCC 8 cut(s) 222, 249, 607, 723, 969, 2383, 2967, 3722
NmuCI GTSAC 2 cut(s) 2312, 3623
NsiI ATGCAT 1 cut(s) 169
NspI RCATGY 4 cut(s) 956, 1838, 2039, 2645
PaeR7I CTCGAG 1 cut(s) 842
PagI TCATGA 1 cut(s) 759
PaqCI CACCTGC 1 cut(s) 1375
PciI ACATGT 3 cut(s) 1834, 2035, 2641
PcsI WCGNNNNNNNCGW 1 cut(s) 699
PctI GAATGC 2 cut(s) 1629, 3854
PdmI GAANNNNTTC 1 cut(s) 3048
PfeI GAWTC 8 cut(s) 351, 654, 838, 1556, 1897, 2098, 2228, 3305
PflFI GACNNNGTC 1 cut(s) 3980
PkrI GCNGC 7 cut(s) 572, 673, 1909, 2182, 2245, 2479, 3019
PleI GAGTC 3 cut(s) 237, 937, 2309
PpsI GAGTC 3 cut(s) 237, 937, 2309
Ppu21I YACGTR 1 cut(s) 2342
PpuMI RGGWCCY 2 cut(s) 2381, 2965
PscI ACATGT 3 cut(s) 1834, 2035, 2641
Psp124BI GAGCTC 3 cut(s) 950, 1418, 3519
Psp5II RGGWCCY 2 cut(s) 2381, 2965
Psp6I CCWGG 9 cut(s) 389, 906, 1823, 2088, 3241, 3373, 3674, 3775, 3793
PspEI GGTNACC 1 cut(s) 3623
PspFI CCCAGC 2 cut(s) 1888, 3963
PspGI CCWGG 9 cut(s) 389, 906, 1823, 2088, 3241, 3373, 3674, 3775, 3793
PspN4I GGNNCC 8 cut(s) 222, 249, 607, 723, 969, 2383, 2967, 3722
PspPI GGNCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
PspPPI RGGWCCY 2 cut(s) 2381, 2965
PsrI GAACNNNNNNTAC 2 cut(s) 3852, 3884
PstI CTGCAG 1 cut(s) 2482
PsuI RGATCY 1 cut(s) 220
PsyI GACNNNGTC 1 cut(s) 3980
PvuII CAGCTG 2 cut(s) 1910, 2729
RseI CAYNNNNRTG 2 cut(s) 1539, 2175
SacI GAGCTC 3 cut(s) 950, 1418, 3519
SatI GCNGC 7 cut(s) 571, 672, 1908, 2181, 2244, 2478, 3018
Sau96I GGNCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 3 cut(s) 238, 938, 2309
SduI GDGCHC 5 cut(s) 950, 972, 1418, 3519, 3723
SexAI ACCWGGT 1 cut(s) 3775
SfcI CTRYAG 1 cut(s) 2478
Sfr274I CTCGAG 1 cut(s) 842
SinI GGWCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
SlaI CTCGAG 1 cut(s) 842
SmiMI CAYNNNNRTG 2 cut(s) 1539, 2175
SmlI CTYRAG 4 cut(s) 140, 842, 2687, 3612
SmoI CTYRAG 4 cut(s) 140, 842, 2687, 3612
SpeI ACTAGT 3 cut(s) 206, 1685, 3641
SsiI CCGC 3 cut(s) 965, 2116, 2386
SspI AATATT 2 cut(s) 2713, 3143
SstI GAGCTC 3 cut(s) 950, 1418, 3519
StyI CCWWGG 5 cut(s) 431, 1014, 2649, 3153, 3186
TaiI ACGT 3 cut(s) 2344, 3932, 4039
TaqI TCGA 5 cut(s) 349, 843, 1750, 2156, 2518
TatI WGTACW 6 cut(s) 1605, 1682, 1815, 2016, 3130, 3412
TfiI GAWTC 8 cut(s) 351, 654, 838, 1556, 1897, 2098, 2228, 3305
TseFI GTSAC 2 cut(s) 2312, 3623
TseI GCWGC 7 cut(s) 570, 671, 1907, 2180, 2243, 2477, 3017
Tsp45I GTSAC 2 cut(s) 2312, 3623
TspGWI ACGGA 3 cut(s) 595, 2142, 2312
Tth111I GACNNNGTC 1 cut(s) 3980
VpaK11BI GGWCC 6 cut(s) 721, 1564, 2381, 2965, 3190, 3362
XagI CCTNNNNNAGG 1 cut(s) 3816
XceI RCATGY 4 cut(s) 956, 1838, 2039, 2645
XcmI CCANNNNNNNNNTGG 2 cut(s) 2981, 3431
XhoI CTCGAG 1 cut(s) 842
XmiI GTMKAC 3 cut(s) 2558, 2659, 2900
XmnI GAANNNNTTC 1 cut(s) 3048
ZrmI AGTACT 1 cut(s) 1684
Zsp2I ATGCAT 1 cut(s) 169
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.