Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb6

Orthogroup ID

OG0011023

Physical Location & Seq

Genomic Coordinates Reverse (-)

37769585 .. 37777277

Gene Structure 7693 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_6g50810.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3585 bp

ATGCCGAGGGGGAGAAGGAGGACGATACATTTTAGTAAATTGTACTCGTTTTCGTGTTTTAAGCCGACTTACGAAGATGATCATGCCAGGATTGGGGATAGGGGCTACTCCAGGGTTGTGCAGTGTAATGAACCGGAGAATGCGGAGGCGCTGCAGTTGAAGTATAGGGGGAATTATGTCTCGACTACTAAGTATTCGGCAGCAAATTTCATTCCGAAGTCTTTGTTTGAGCAGTTTAGGAGGGTGGCGAATATATACTTTCTTGTTGTGGCTTGTGTTTCGTTCAGTCCGTTGGCGCCTTTTAAGGCTGTTAGTGTTCTTGTACCGTTGTTGGTGGTGATTGGAGCTACTATGGTCAAGGAAGCTATAGAAGATTGGAGGCGAAGGAGACAGGATGTGGAGGCAAACAATCGAAAGGTGGAAGTGTACAGTAGGAATTATTCATTCATAGAGACCAGATGGAAGAAACTTAGAGTTGGTGATCTTGTGAAGGTGCGCAAGGATGAGTACTTTCCTGCTGATCTGCTTTTGCTTTCATCAAGCTATGAGGATGGCATATGCTATGTGGAAACTATGAATCTTGATGGAGAAACAAATTTAAAATTGAAGCGAGCACTGGAGGTGACTTCCCATCTTAATGATGAAAATTCCTTACAAAAATTTAGGGCAAAGATCATGTGTGAGGATCCAAATGAAAATCTATATTCATTTGTTGGGACTTTGTTCCATAACGGGGAAGAATACCCACTATCGTTGCAACAGATGCTCCTGAGAGACTCTAAGCTGAAAAATACAGAATTTGTGTATGGTGTTGTTGTTTTCACTGGGCATGACACAAAAGTTATGCAAAATGCCACAGATCCTCCTTCAAAGAGAAGTAAAATCGAGAGGAAAATGGATAAGATTATCTACATCCTTTTCAGTACTCTGTTTGTGATAGCTTTTGTTGGATCTGTCTTTTTTGGTATTTATACCAAAAATGATTATAGTGGTGGAAAGATCACAAGGTGGTATCTTCGTCCAAGCCCAGATGTAGCCGTTGTGTATTATGATCCCCAAAGGCCAGCACTTGCAGCTCTCCTCCATTTTCTGACAGCTCTTATGTTGTATGGATATCTGATACCAATATCTTTATATGTTTCAATTGAAATGGTGAAGGTATTACAGAGCATATTCATTAACAGGGATCAGGATATGTACTATGAGGAAACAGATAGGCCAGCTCATGCACGCACCTCTAATCTGAATGAGGAACTTGGTCAGATTGATATGATACTTTCTGATAAAACTGGTACACTGACATGCAACTCCATGGAGTTTATTAAATGTTCAATAGCAGGCACCGCTTATGGCCATGGTATGACAGAAGTGGAAATGGCACTGGCAAGTAGAAGGGATGGAGTGCCTGAAAATGGTCATATATCATCTGATGTGGTAGAGCATAGTACTGGTGTTGCTGATAGCTCTCGAAAGTCAATTAAGGGTTTCAACTTCAGGGATGAGCGCATCATGAATGGGCACTGGGTTAATGAACCTCATTCAGATACCATCCAGAAATTCTTTCGGGTTTTAGCAATCTGTCATACAGCCATACCTGTTGTGGATAAAGAATCAGGAGAAATATCTTACGAAGCTGAGTCACCAGATGAAGCAGCTTTTGTCATAGCTGCCAGGGAGCTCGGCTTTGGGTTTTTTGAAAGGAAACAAACGAGCATATCATTGCATGAGTTAGATTACAAGACTGGAGAAAAGGATGACAGAGAATATGAGCTTCTTCATGTCTTGGAGTTCAATAGTTCTCGCAAAAGAATGTCAGTAATTGTCAGGAGTCCGGAAAACAAACTGTTGCTTCTTTGCAAAGGTGCAGACAGTGCAATTTTTGAAAGGCTGGCAAAAGATGGGCGCCAGTTTGAGGATCAAACTAAGGAGCACATTCACAAATATGCTGAAGCAGGTTTACGAACTTTGGTGGTTGCATACCGTGAGCTTGGTCTAGAAGAATATAAAGAATGGGAACAGAAGTTTCTAAAGGCCAAAGCTTCTCTCACTGAAGGCCGAGATGTATTAATGGATGAGCTTGCTGATAAGATTGAAAGCGAGTTAGTTCTACTTGGCGTGACAGCTGTTGAGGACAAACTGCAAAAGGGGGTTCCTGAGTGTATCAACAAACTTGCTCTGGCTGGAATTAAACTTTGGGTATTGACTGGTGATAAAATGGAAACTGCAGTTAACATAGGGTATGCTTGCAGTTTACTTCGACAAGATATGAAACGGATTGTCATCAGTCTTGATTCACCAGATATAAATGCATTGGAAAAACAAGGGAACAAAGACGCTATTCAGAAGGCCTGTCATGTGAGCACCAAGAAGCAGATTGGGGAAGGTTTTTCGCAAATTAATGAAGCTAGAAAAGGTTCCAGCTCCGCTAAAGCATTTGGCTTAATAATTGATGGCAAGTCCTTGGAATATTCACTAAAGGAGGATTTGGAAAAGTCATTTTTTGAGCTTGCAATTAATTGTGCTTCAGTTATATGCTGCCGCTCTACGCCCAAACAGAAAGCTCTTGTTACGAGATTGGTAAAAAATGAGACAGGTAGAATAACACTTGCTATTGGTGATGGGGCGAATGATGTTGGCATGCTTCAAGAGGCAGACATTGGCGTTGGCATTAGTGGTGTTGAAGGGATGCAGGCAGTGATGGCAAGTGATTTTTCAATCGCTCAATTTCGTTTTCTGGAGCGTCTCTTGCTTGTACACGGGCATTGGTGTTACAGGCGTATATCAATGATGATATGCTACTTCTTCTACAAGAACATAACATTTGGGTTTACTCTGTTTTGGTTTGAGGCCCATAATTCTTTCTCTGGTCTGCCTGCGTATAATGATTGGTACATGTCATGCTACAATGTCTTCTTCACATCACTTCCTGTCATTGCTCTAGGTGTATTCGATCAGGATGTTTCTGCACGACTATGCCTGAAGTACCCATCCTTATATCTAGAGGGGGTGGAGAACATCCTCTTCAGCTGGACCCGCATACTCGGCTGGATGTTTAATGGATTGTTGAGCTCCATAATAATCTTCTTCTTCACCACCAATTCTATGATTCCTCAGCCGTTTCGGAAAGATGGTCAAGTAGCTGACTATCAAATCCTAGGTGTCACAATGTACACTTGCGTAGTGTGGGCTGTAAACTGCCAAATGGCGATCTCCATCAACTACTTCACTTGGATCCAGCACTTATTCATCTGGGGCAGTATCGCCTTCTGGTACATCTTTTTAGTCGTATATGGTTTTATCTCGCCTAGTAAATCCACAACAGCATACAAAGTGTTTGTGGAAGAGTGTGCTCCCAGTCCTCTCTATTGGCTAGTCACCCTTCTTGTTGTCATCTGCACTCTGCTGCCATATTTCTCATACCGCGCTTTCCAGACACGGTTTAAACCAATGCGTCACGATGTAATACAGCAGAAACGATTACTGAGTTGTGACAATGATCAGATTGACGCTTCTGGTGAATTGCCCGTAAGAGTCAGAGGCAAGCTACAGCATCTGAGGCAGAGACTAAAAGAAAGAGAGTCGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

1195

Amino Acids

136.33

Weight (kDa)

7.27

Isoelectric Point (pI)

40.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PhoLip_ATPase_N	PF16209	40 - 105	3.1e-22	Phospholipid-translocating ATPase N-terminal
Cation_ATPase	PF13246	517 - 715	4.6e-20	P-type ATPase, cytoplasmic domain N
PhoLip_ATPase_C	PF16212	899 - 1149	2.7e-92	Phospholipid-translocating P-type ATPase C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27870 AT3G27870 AT3G27870
fragaria_vesca	FvH4_6g50810
malus_domestica	MD09G1032100.v1.1 MD17G1033800.v1.1
prunus_persica	Prupe.3G285900_v2.0.a1 Prupe.3G285900_v2.0.a1
pyrus_communis	pycom111g02540
rosa_chinensis	RchiOBHm_Chr2g0172201
rosa_laevigata	RLG00000022092
rosa_multiflora	Rmu_ssc0000252.1_g000050
rosa_roxburghii	Rroxscaffold_2G00080090
rosa_rugosa	Rorug02G0557000 Rorug02G0557100 Rorug02G0557200
rosa_samantha	Rh2AG632600 Rh2BG646200 Rh2DG660800
rosa_wichuraiana	Rw2G052370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	497
Acc36I	ACCTGC	1 cut(s)	1943
AccB1I	GGYRCC	3 cut(s)	295, 1340, 1902
AccBSI	CCGCTC	1 cut(s)	2541
AccII	CGCG	1 cut(s)	3423
AccIII	TCCGGA	1 cut(s)	1831
AciI	CCGC	6 cut(s)	143, 1344, 2424, 2539, 3034, 3421
AclWI	GGATC	9 cut(s)	680, 693, 854, 958, 1046, 1194, 1923, 3226, 3239
AcoI	YGGCCR	1 cut(s)	1351
AcsI	RAATTY	6 cut(s)	205, 595, 646, 659, 797, 1556
AcuI	CTGAAG	6 cut(s)	1477, 1968, 2070, 2508, 2999, 3007
AcyI	GRCGYC	2 cut(s)	296, 1903
AdeI	CACNNNGTG	1 cut(s)	1008
AfiI	CCNNNNNNNGG	4 cut(s)	93, 733, 1412, 1912
AflIII	ACRYGT	1 cut(s)	2892
AjnI	CCWGG	3 cut(s)	86, 110, 1670
AjuI	GAANNNNNNNTTGG	2 cut(s)	2176, 2208
Alw21I	GWGCWC	6 cut(s)	616, 1680, 1932, 2363, 3071, 3352
Alw26I	GTCTC	7 cut(s)	184, 382, 446, 768, 2582, 2747, 3556
AlwI	GGATC	9 cut(s)	680, 693, 854, 958, 1046, 1194, 1923, 3226, 3239
AlwNI	CAGNNNCTG	1 cut(s)	3553
Aor13HI	TCCGGA	1 cut(s)	1831
AoxI	GGCC	7 cut(s)	1061, 1217, 1351, 2031, 2053, 2346, 2847
ApeKI	GCWGC	7 cut(s)	151, 200, 1073, 1652, 1667, 2535, 3403
ApoI	RAATTY	6 cut(s)	205, 595, 646, 659, 797, 1556
AseI	ATTAAT	3 cut(s)	2066, 2397, 2514
Asp700I	GAANNNNTTC	1 cut(s)	2413
AspA2I	CCTAGG	1 cut(s)	3154
AspLEI	GCGC	6 cut(s)	151, 298, 498, 1506, 1905, 3425
AspS9I	GGNCC	2 cut(s)	2848, 3030
AvaII	GGWCC	1 cut(s)	3030
AvrII	CCTAGG	1 cut(s)	3154
BaeGI	GKGCMC	1 cut(s)	1521
BalI	TGGCCA	1 cut(s)	1353
BamHI	GGATCC	2 cut(s)	685, 3231
BanI	GGYRCC	3 cut(s)	295, 1340, 1902
BanII	GRGCYC	2 cut(s)	1680, 3071
BarI	GAAGNNNNNNTAC	2 cut(s)	1941, 1973
BbsI	GAAGAC	1 cut(s)	2902
Bbv12I	GWGCWC	6 cut(s)	616, 1680, 1932, 2363, 3071, 3352
BbvCI	CCTCAGC	1 cut(s)	3111
BbvI	GCAGC	7 cut(s)	138, 212, 1085, 1654, 1664, 2522, 3390
BceAI	ACGGC	2 cut(s)	1022, 3100
BciT130I	CCWGG	3 cut(s)	88, 112, 1672
BclI	TGATCA	2 cut(s)	79, 3496
BcoDI	GTCTC	7 cut(s)	184, 382, 446, 768, 2582, 2747, 3556
BfaI	CTAG	7 cut(s)	1994, 2406, 2939, 2999, 3155, 3306, 3371
BfmI	CTRYAG	4 cut(s)	152, 366, 2223, 3545
BfoI	RGCGCY	3 cut(s)	152, 299, 1906
BfuAI	ACCTGC	1 cut(s)	1943
BisI	GCNGC	8 cut(s)	152, 201, 1074, 1653, 1668, 2536, 2539, 3404
BlnI	CCTAGG	1 cut(s)	3154
BlsI	GCNGC	8 cut(s)	153, 202, 1075, 1654, 1669, 2537, 2540, 3405
BmcAI	AGTACT	3 cut(s)	509, 925, 1447
Bme1390I	CCNGG	3 cut(s)	88, 112, 1672
Bme18I	GGWCC	1 cut(s)	3030
BmgT120I	GGNCC	2 cut(s)	2848, 3030
BmiI	GGNNCC	8 cut(s)	297, 687, 1342, 1904, 2151, 2416, 3032, 3233
BmrFI	CCNGG	3 cut(s)	88, 112, 1672
BmrI	ACTGGG	3 cut(s)	834, 1531, 3348
BmsI	GCATC	4 cut(s)	753, 1515, 2676, 3559
BmuI	ACTGGG	3 cut(s)	834, 1531, 3348
BpiI	GAAGAC	1 cut(s)	2902
BpmI	CTGGAG	4 cut(s)	94, 638, 1764, 2756
Bpu10I	CCTNAGC	1 cut(s)	3111
BsaBI	GATNNNNATC	2 cut(s)	2279, 3212
BsaHI	GRCGYC	2 cut(s)	296, 1903
BsaI	GGTCTC	1 cut(s)	446
BsaJI	CCNNGG	7 cut(s)	5, 111, 1311, 1354, 1671, 2460, 3154
BsaWI	WCCGGW	2 cut(s)	133, 1831
BsaXI	ACNNNNNCTCC	4 cut(s)	750, 780, 847, 877
Bsc4I	CCNNNNNNNGG	4 cut(s)	93, 733, 1412, 1912
Bse3DI	GCAATG	2 cut(s)	1718, 2931
Bse8I	GATNNNNATC	2 cut(s)	2279, 3212
BseAI	TCCGGA	1 cut(s)	1831
BseBI	CCWGG	3 cut(s)	88, 112, 1672
BseDI	CCNNGG	7 cut(s)	5, 111, 1311, 1354, 1671, 2460, 3154
BseJI	GATNNNNATC	2 cut(s)	2279, 3212
BseLI	CCNNNNNNNGG	4 cut(s)	93, 733, 1412, 1912
BseMI	GCAATG	2 cut(s)	1718, 2931
BseMII	CTCAG	6 cut(s)	761, 1626, 2145, 3125, 3473, 3545
BseRI	GAGGAG	1 cut(s)	1070
BseSI	GKGCMC	1 cut(s)	1521
BseXI	GCAGC	7 cut(s)	138, 212, 1085, 1654, 1664, 2522, 3390
BsgI	GTGCAG	4 cut(s)	140, 1884, 2949, 3379
Bsh1236I	CGCG	1 cut(s)	3423
BshFI	GGCC	7 cut(s)	1063, 1219, 1353, 2033, 2055, 2348, 2849
BshNI	GGYRCC	3 cut(s)	295, 1340, 1902
BsiHKAI	GWGCWC	6 cut(s)	616, 1680, 1932, 2363, 3071, 3352
BsiSI	CCGG	2 cut(s)	134, 1832
BslFI	GGGAC	1 cut(s)	730
BslI	CCNNNNNNNGG	4 cut(s)	93, 733, 1412, 1912
BsmAI	GTCTC	7 cut(s)	184, 382, 446, 768, 2582, 2747, 3556
BsmBI	CGTCTC	1 cut(s)	2747
BsmFI	GGGAC	1 cut(s)	730
BsmI	GAATGC	1 cut(s)	145
BsnI	GGCC	7 cut(s)	1063, 1219, 1353, 2033, 2055, 2348, 2849
Bso31I	GGTCTC	1 cut(s)	446
Bsp1286I	GDGCHC	7 cut(s)	616, 1521, 1680, 1932, 2363, 3071, 3352
Bsp13I	TCCGGA	1 cut(s)	1831
Bsp1407I	TGTACA	3 cut(s)	426, 2752, 3168
Bsp19I	CCATGG	2 cut(s)	1311, 1354
BspACI	CCGC	6 cut(s)	143, 1344, 2424, 2539, 3034, 3421
BspANI	GGCC	7 cut(s)	1063, 1219, 1353, 2033, 2055, 2348, 2849
BspCNI	CTCAG	6 cut(s)	762, 1627, 2146, 3124, 3474, 3546
BspEI	TCCGGA	1 cut(s)	1831
BspFNI	CGCG	1 cut(s)	3423
BspHI	TCATGA	1 cut(s)	1509
BspLI	GGNNCC	8 cut(s)	297, 687, 1342, 1904, 2151, 2416, 3032, 3233
BspMAI	CTGCAG	2 cut(s)	156, 2227
BspMI	ACCTGC	1 cut(s)	1943
BspPI	GGATC	9 cut(s)	680, 693, 854, 958, 1046, 1194, 1923, 3226, 3239
BspT107I	GGYRCC	3 cut(s)	295, 1340, 1902
BspTNI	GGTCTC	1 cut(s)	446
BsrBI	CCGCTC	1 cut(s)	2541
BsrDI	GCAATG	2 cut(s)	1718, 2931
BsrGI	TGTACA	3 cut(s)	426, 2752, 3168
BssECI	CCNNGG	7 cut(s)	5, 111, 1311, 1354, 1671, 2460, 3154
BssNI	GRCGYC	2 cut(s)	296, 1903
BssT1I	CCWWGG	4 cut(s)	1311, 1354, 2460, 3154
Bst2UI	CCWGG	3 cut(s)	88, 112, 1672
Bst4CI	ACNGT	6 cut(s)	327, 431, 1845, 1871, 1982, 3438
Bst6I	CTCTTC	2 cut(s)	3026, 3336
BstACI	GRCGYC	2 cut(s)	296, 1903
BstAPI	GCANNNNNTGC	2 cut(s)	763, 1871
BstAUI	TGTACA	3 cut(s)	426, 2752, 3168
BstDSI	CCRYGG	2 cut(s)	1311, 1354
BstFNI	CGCG	1 cut(s)	3423
BstH2I	RGCGCY	3 cut(s)	152, 299, 1906
BstHHI	GCGC	6 cut(s)	151, 298, 498, 1506, 1905, 3425
BstMAI	GTCTC	7 cut(s)	184, 382, 446, 768, 2582, 2747, 3556
BstMWI	GCNNNNNNNGC	9 cut(s)	763, 1073, 1343, 1871, 2699, 2746, 3033, 3042, 3556
BstNI	CCWGG	3 cut(s)	88, 112, 1672
BstNSI	RCATGY	3 cut(s)	1305, 2641, 2896
BstSCI	CCNGG	3 cut(s)	86, 110, 1670
BstSFI	CTRYAG	4 cut(s)	152, 366, 2223, 3545
BstSLI	GKGCMC	1 cut(s)	1521
BstUI	CGCG	1 cut(s)	3423
BstV1I	GCAGC	7 cut(s)	138, 212, 1085, 1654, 1664, 2522, 3390
BstV2I	GAAGAC	1 cut(s)	2902
BstX2I	RGATCY	4 cut(s)	685, 859, 950, 3231
BstYI	RGATCY	4 cut(s)	685, 859, 950, 3231
BsuRI	GGCC	7 cut(s)	1063, 1219, 1353, 2033, 2055, 2348, 2849
BtgI	CCRYGG	2 cut(s)	1311, 1354
BtsI	GCAGTG	2 cut(s)	128, 2700
BtsIMutI	CAGTG	9 cut(s)	128, 614, 822, 1295, 1379, 1519, 1876, 2046, 2700
BveI	ACCTGC	1 cut(s)	1943
CaiI	CAGNNNCTG	1 cut(s)	3553
CciI	TCATGA	1 cut(s)	1509
CfoI	GCGC	6 cut(s)	151, 298, 498, 1506, 1905, 3425
Cfr13I	GGNCC	2 cut(s)	2848, 3030
CseI	GACGC	4 cut(s)	2342, 2729, 3440, 3515
CspCI	CAANNNNNGTGG	2 cut(s)	735, 770
DinI	GGCGCC	2 cut(s)	297, 1904
DraI	TTTAAA	2 cut(s)	600, 3442
DraIII	CACNNNGTG	1 cut(s)	1008
EaeI	YGGCCR	1 cut(s)	1351
Eam1104I	CTCTTC	2 cut(s)	3026, 3336
EarI	CTCTTC	2 cut(s)	3026, 3336
Ecl136II	GAGCTC	2 cut(s)	1678, 3069
Eco130I	CCWWGG	4 cut(s)	1311, 1354, 2460, 3154
Eco147I	AGGCCT	1 cut(s)	2348
Eco24I	GRGCYC	2 cut(s)	1680, 3071
Eco31I	GGTCTC	1 cut(s)	446
Eco32I	GATATC	1 cut(s)	1115
Eco47I	GGWCC	1 cut(s)	3030
Eco53kI	GAGCTC	2 cut(s)	1678, 3069
Eco57I	CTGAAG	6 cut(s)	1477, 1968, 2070, 2508, 2999, 3007
EcoICRI	GAGCTC	2 cut(s)	1678, 3069
EcoRII	CCWGG	3 cut(s)	86, 110, 1670
EcoRV	GATATC	1 cut(s)	1115
EcoT14I	CCWWGG	4 cut(s)	1311, 1354, 2460, 3154
EcoT22I	ATGCAT	1 cut(s)	2311
EcoT38I	GRGCYC	2 cut(s)	1680, 3071
EgeI	GGCGCC	2 cut(s)	297, 1904
EheI	GGCGCC	2 cut(s)	297, 1904
ErhI	CCWWGG	4 cut(s)	1311, 1354, 2460, 3154
Esp3I	CGTCTC	1 cut(s)	2747
FaqI	GGGAC	1 cut(s)	730
FauI	CCCGC	1 cut(s)	3041
FauNDI	CATATG	1 cut(s)	557
FbaI	TGATCA	2 cut(s)	79, 3496
Fnu4HI	GCNGC	8 cut(s)	152, 201, 1074, 1653, 1668, 2536, 2539, 3404
FriOI	GRGCYC	2 cut(s)	1680, 3071
Fsp4HI	GCNGC	8 cut(s)	152, 201, 1074, 1653, 1668, 2536, 2539, 3404
FspBI	CTAG	7 cut(s)	1994, 2406, 2939, 2999, 3155, 3306, 3371
FspI	TGCGCA	1 cut(s)	497
GlaI	GCGC	6 cut(s)	150, 297, 497, 1505, 1904, 3424
GluI	GCNGC	8 cut(s)	152, 201, 1074, 1653, 1668, 2536, 2539, 3404
GsuI	CTGGAG	4 cut(s)	94, 638, 1764, 2756
HaeII	RGCGCY	3 cut(s)	152, 299, 1906
HaeIII	GGCC	7 cut(s)	1063, 1219, 1353, 2033, 2055, 2348, 2849
HapII	CCGG	2 cut(s)	134, 1832
HgaI	GACGC	4 cut(s)	2342, 2729, 3440, 3515
HhaI	GCGC	6 cut(s)	151, 298, 498, 1506, 1905, 3425
Hin1I	GRCGYC	2 cut(s)	296, 1903
Hin6I	GCGC	6 cut(s)	149, 296, 496, 1504, 1903, 3423
HinP1I	GCGC	6 cut(s)	149, 296, 496, 1504, 1903, 3423
HincII	GTYRAC	1 cut(s)	2230
HindII	GTYRAC	1 cut(s)	2230
HindIII	AAGCTT	1 cut(s)	2037
HinfI	GANTC	9 cut(s)	577, 776, 1610, 1637, 1828, 2291, 3106, 3531, 3578
HpaI	GTTAAC	1 cut(s)	2230
HpaII	CCGG	2 cut(s)	134, 1832
Hpy166II	GTNNAC	9 cut(s)	427, 1295, 1958, 2230, 2252, 2755, 2829, 3171, 3193
Hpy8I	GTNNAC	9 cut(s)	427, 1295, 1958, 2230, 2252, 2755, 2829, 3171, 3193
HpyCH4III	ACNGT	6 cut(s)	327, 431, 1845, 1871, 1982, 3438
HpyF10VI	GCNNNNNNNGC	9 cut(s)	763, 1073, 1343, 1871, 2699, 2746, 3033, 3042, 3556
Hsp92I	GRCGYC	2 cut(s)	296, 1903
HspAI	GCGC	6 cut(s)	149, 296, 496, 1504, 1903, 3423
KasI	GGCGCC	2 cut(s)	295, 1902
Kpn2I	TCCGGA	1 cut(s)	1831
Ksp22I	TGATCA	2 cut(s)	79, 3496
KspAI	GTTAAC	1 cut(s)	2230
LmnI	GCTCC	8 cut(s)	344, 771, 1675, 1927, 2426, 2737, 3074, 3355
Lsp1109I	GCAGC	7 cut(s)	138, 212, 1085, 1654, 1664, 2522, 3390
LweI	GCATC	4 cut(s)	753, 1515, 2676, 3559
MaeI	CTAG	7 cut(s)	1994, 2406, 2939, 2999, 3155, 3306, 3371
MaeIII	GTNAC	9 cut(s)	622, 1638, 2116, 2566, 2768, 3160, 3373, 3452, 3488
MbiI	CCGCTC	1 cut(s)	2541
MfeI	CAATTG	1 cut(s)	1143
MflI	RGATCY	4 cut(s)	685, 859, 950, 3231
MhlI	GDGCHC	7 cut(s)	616, 1521, 1680, 1932, 2363, 3071, 3352
MlsI	TGGCCA	1 cut(s)	1353
MluNI	TGGCCA	1 cut(s)	1353
Mly113I	GGCGCC	2 cut(s)	296, 1903
MlyI	GAGTC	4 cut(s)	770, 1646, 1837, 3540
MmeI	TCCRAC	1 cut(s)	928
Mox20I	TGGCCA	1 cut(s)	1353
Mph1103I	ATGCAT	1 cut(s)	2311
MroI	TCCGGA	1 cut(s)	1831
MroXI	GAANNNNTTC	1 cut(s)	2413
MscI	TGGCCA	1 cut(s)	1353
MslI	CAYNNNNRTG	4 cut(s)	636, 1300, 1941, 2971
Msp20I	TGGCCA	1 cut(s)	1353
MspA1I	CMGCKG	2 cut(s)	2123, 3027
MspI	CCGG	2 cut(s)	134, 1832
MspR9I	CCNGG	3 cut(s)	88, 112, 1672
MssI	GTTTAAAC	1 cut(s)	3442
MunI	CAATTG	1 cut(s)	1143
Mva1269I	GAATGC	1 cut(s)	145
MvaI	CCWGG	3 cut(s)	88, 112, 1672
MvnI	CGCG	1 cut(s)	3423
MwoI	GCNNNNNNNGC	9 cut(s)	763, 1073, 1343, 1871, 2699, 2746, 3033, 3042, 3556
NarI	GGCGCC	2 cut(s)	296, 1903
NcoI	CCATGG	2 cut(s)	1311, 1354
NdeI	CATATG	1 cut(s)	557
NlaIV	GGNNCC	8 cut(s)	297, 687, 1342, 1904, 2151, 2416, 3032, 3233
NmeAIII	GCCGAG	4 cut(s)	30, 1659, 2081, 3021
NmuCI	GTSAC	7 cut(s)	622, 1638, 2116, 3160, 3373, 3452, 3488
NsbI	TGCGCA	1 cut(s)	497
NsiI	ATGCAT	1 cut(s)	2311
NspI	RCATGY	3 cut(s)	1305, 2641, 2896
PaeI	GCATGC	1 cut(s)	2641
PagI	TCATGA	1 cut(s)	1509
PceI	AGGCCT	1 cut(s)	2348
PciI	ACATGT	1 cut(s)	2892
PcsI	WCGNNNNNNNCGW	1 cut(s)	287
PctI	GAATGC	1 cut(s)	145
PdmI	GAANNNNTTC	1 cut(s)	2413
PfeI	GAWTC	4 cut(s)	577, 1610, 2291, 3106
PkrI	GCNGC	8 cut(s)	153, 202, 1075, 1654, 1669, 2537, 2540, 3405
PleI	GAGTC	4 cut(s)	770, 1645, 1836, 3539
PluTI	GGCGCC	2 cut(s)	299, 1906
PmeI	GTTTAAAC	1 cut(s)	3442
PpsI	GAGTC	4 cut(s)	770, 1645, 1836, 3539
PscI	ACATGT	1 cut(s)	2892
PshBI	ATTAAT	3 cut(s)	2066, 2397, 2514
Psp124BI	GAGCTC	2 cut(s)	1680, 3071
Psp6I	CCWGG	3 cut(s)	86, 110, 1670
PspGI	CCWGG	3 cut(s)	86, 110, 1670
PspN4I	GGNNCC	8 cut(s)	297, 687, 1342, 1904, 2151, 2416, 3032, 3233
PspPI	GGNCC	2 cut(s)	2848, 3030
PstI	CTGCAG	2 cut(s)	156, 2227
PstNI	CAGNNNCTG	1 cut(s)	3553
PsuI	RGATCY	4 cut(s)	685, 859, 950, 3231
PvuII	CAGCTG	2 cut(s)	2123, 3027
RseI	CAYNNNNRTG	4 cut(s)	636, 1300, 1941, 2971
SacI	GAGCTC	2 cut(s)	1680, 3071
SatI	GCNGC	8 cut(s)	152, 201, 1074, 1653, 1668, 2536, 2539, 3404
Sau96I	GGNCC	2 cut(s)	2848, 3030
ScaI	AGTACT	3 cut(s)	509, 925, 1447
SchI	GAGTC	4 cut(s)	770, 1646, 1837, 3540
ScrFI	CCNGG	3 cut(s)	88, 112, 1672
SduI	GDGCHC	7 cut(s)	616, 1521, 1680, 1932, 2363, 3071, 3352
SfaNI	GCATC	4 cut(s)	753, 1515, 2676, 3559
SfcI	CTRYAG	4 cut(s)	152, 366, 2223, 3545
SfoI	GGCGCC	2 cut(s)	297, 1904
SinI	GGWCC	1 cut(s)	3030
SmiMI	CAYNNNNRTG	4 cut(s)	636, 1300, 1941, 2971
SphI	GCATGC	1 cut(s)	2641
SseBI	AGGCCT	1 cut(s)	2348
SsiI	CCGC	6 cut(s)	143, 1344, 2424, 2539, 3034, 3421
SspDI	GGCGCC	2 cut(s)	295, 1902
SspI	AATATT	1 cut(s)	2468
SspMI	CTAG	7 cut(s)	1994, 2406, 2939, 2999, 3155, 3306, 3371
SstI	GAGCTC	2 cut(s)	1680, 3071
StuI	AGGCCT	1 cut(s)	2348
StyD4I	CCNGG	3 cut(s)	86, 110, 1670
StyI	CCWWGG	4 cut(s)	1311, 1354, 2460, 3154
TaaI	ACNGT	6 cut(s)	327, 431, 1845, 1871, 1982, 3438
TaqI	TCGA	6 cut(s)	182, 412, 885, 1468, 2257, 2949
TatI	WGTACW	8 cut(s)	42, 426, 507, 923, 1197, 1445, 2752, 3168
TauI	GCSGC	1 cut(s)	2541
TfiI	GAWTC	4 cut(s)	577, 1610, 2291, 3106
TscAI	CASTG	9 cut(s)	128, 621, 829, 1302, 1386, 1526, 1876, 2053, 2700
TseFI	GTSAC	7 cut(s)	622, 1638, 2116, 3160, 3373, 3452, 3488
TseI	GCWGC	7 cut(s)	151, 200, 1073, 1652, 1667, 2535, 3403
Tsp45I	GTSAC	7 cut(s)	622, 1638, 2116, 3160, 3373, 3452, 3488
TspGWI	ACGGA	2 cut(s)	279, 2287
TspRI	CASTG	9 cut(s)	128, 621, 829, 1302, 1386, 1526, 1876, 2053, 2700
VpaK11BI	GGWCC	1 cut(s)	3030
VspI	ATTAAT	3 cut(s)	2066, 2397, 2514
XapI	RAATTY	6 cut(s)	205, 595, 646, 659, 797, 1556
XbaI	TCTAGA	2 cut(s)	1993, 2998
XceI	RCATGY	3 cut(s)	1305, 2641, 2896
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1597
XmaJI	CCTAGG	1 cut(s)	3154
XmnI	GAANNNNTTC	1 cut(s)	2413
XspI	CTAG	7 cut(s)	1994, 2406, 2939, 2999, 3155, 3306, 3371
ZrmI	AGTACT	3 cut(s)	509, 925, 1447
Zsp2I	ATGCAT	1 cut(s)	2311

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.