Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G27870 AT3G27870 AT3G27870 |
| fragaria_vesca | FvH4_6g50810 |
| malus_domestica | MD09G1032100.v1.1 MD17G1033800.v1.1 |
| prunus_persica | Prupe.3G285900_v2.0.a1 Prupe.3G285900_v2.0.a1 |
| pyrus_communis | pycom111g02540 |
| rosa_chinensis | RchiOBHm_Chr2g0172201 |
| rosa_laevigata | RLG00000022092 |
| rosa_multiflora | Rmu_ssc0000252.1_g000050 |
| rosa_roxburghii | Rroxscaffold_2G00080090 |
| rosa_rugosa | Rorug02G0557000 Rorug02G0557100 Rorug02G0557200 |
| rosa_samantha | Rh2AG632600 Rh2BG646200 Rh2DG660800 |
| rosa_wichuraiana | Rw2G052370 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 3146 |
| Acc36I | ACCTGC | 2 cut(s) | 1940, 2878 |
| AccB1I | GGYRCC | 2 cut(s) | 301, 328 |
| AccBSI | CCGCTC | 1 cut(s) | 2737 |
| AccI | GTMKAC | 1 cut(s) | 200 |
| AccII | CGCG | 2 cut(s) | 1798, 1980 |
| AciI | CCGC | 8 cut(s) | 13, 1798, 1900, 1978, 2690, 2737, 3031, 3550 |
| AclWI | GGATC | 5 cut(s) | 860, 964, 1920, 3223, 3236 |
| AcoI | YGGCCR | 5 cut(s) | 1258, 1351, 1513, 2697, 3106 |
| AcsI | RAATTY | 4 cut(s) | 652, 665, 1553, 2462 |
| AcuI | CTGAAG | 6 cut(s) | 143, 626, 1965, 2045, 3004, 3566 |
| AcyI | GRCGYC | 2 cut(s) | 302, 329 |
| AfaI | GTAC | 9 cut(s) | 515, 731, 931, 1161, 1294, 1434, 2751, 2888, 3167 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 99, 100, 643, 1189, 1412, 1855, 2178, 2731, 3037 |
| AflII | CTTAAG | 1 cut(s) | 775 |
| AflIII | ACRYGT | 2 cut(s) | 1301, 2889 |
| AhlI | ACTAGT | 1 cut(s) | 1445 |
| AjiI | CACGTC | 1 cut(s) | 1236 |
| AjnI | CCWGG | 4 cut(s) | 1260, 1667, 2172, 3108 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 605, 637, 2637, 2669 |
| AleI | CACNNNNGTG | 1 cut(s) | 845 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 95, 127 |
| Alw21I | GWGCWC | 6 cut(s) | 504, 1929, 1986, 3068, 3349, 3543 |
| Alw26I | GTCTC | 6 cut(s) | 452, 774, 1488, 3301, 3491, 3514 |
| Alw44I | GTGCAC | 1 cut(s) | 500 |
| AlwI | GGATC | 5 cut(s) | 860, 964, 1920, 3223, 3236 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1343 |
| AoxI | GGCC | 8 cut(s) | 1217, 1258, 1351, 1513, 2028, 2697, 2844, 3106 |
| ApaLI | GTGCAC | 1 cut(s) | 500 |
| ApeKI | GCWGC | 4 cut(s) | 206, 1073, 1649, 1664 |
| ApoI | RAATTY | 4 cut(s) | 652, 665, 1553, 2462 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2025, 2057 |
| AseI | ATTAAT | 2 cut(s) | 2394, 2511 |
| AspA2I | CCTAGG | 1 cut(s) | 3151 |
| AspLEI | GCGC | 4 cut(s) | 304, 331, 2775, 3322 |
| AspS9I | GGNCC | 3 cut(s) | 691, 2845, 3027 |
| AsuC2I | CCSGG | 1 cut(s) | 3419 |
| AsuII | TTCGAA | 1 cut(s) | 1692 |
| AvaII | GGWCC | 2 cut(s) | 691, 3027 |
| AvrII | CCTAGG | 1 cut(s) | 3151 |
| BaeGI | GKGCMC | 3 cut(s) | 504, 1381, 2760 |
| BalI | TGGCCA | 5 cut(s) | 1260, 1353, 1515, 2699, 3108 |
| BamHI | GGATCC | 1 cut(s) | 3228 |
| BanI | GGYRCC | 2 cut(s) | 301, 328 |
| BanII | GRGCYC | 2 cut(s) | 1986, 3068 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1938, 1970 |
| BbsI | GAAGAC | 3 cut(s) | 23, 2133, 2899 |
| Bbv12I | GWGCWC | 6 cut(s) | 504, 1929, 1986, 3068, 3349, 3543 |
| BbvI | GCAGC | 4 cut(s) | 218, 1060, 1651, 1661 |
| BceAI | ACGGC | 2 cut(s) | 219, 2520 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 832, 866 |
| BciT130I | CCWGG | 4 cut(s) | 1262, 1669, 2174, 3110 |
| BciVI | GTATCC | 2 cut(s) | 24, 2991 |
| BclI | TGATCA | 2 cut(s) | 678, 2947 |
| BcnI | CCSGG | 1 cut(s) | 3419 |
| BcoDI | GTCTC | 6 cut(s) | 452, 774, 1488, 3301, 3491, 3514 |
| BcuI | ACTAGT | 1 cut(s) | 1445 |
| BfaI | CTAG | 6 cut(s) | 1446, 2415, 3152, 3368, 3536, 3564 |
| BfmI | CTRYAG | 4 cut(s) | 861, 1163, 2220, 2767 |
| BfoI | RGCGCY | 2 cut(s) | 305, 332 |
| BfrI | CTTAAG | 1 cut(s) | 775 |
| BfuAI | ACCTGC | 2 cut(s) | 1940, 2878 |
| BfuI | GTATCC | 2 cut(s) | 24, 2991 |
| BisI | GCNGC | 6 cut(s) | 207, 1074, 1650, 1665, 1901, 2738 |
| BlnI | CCTAGG | 1 cut(s) | 3151 |
| BlsI | GCNGC | 6 cut(s) | 208, 1075, 1651, 1666, 1902, 2739 |
| BmcAI | AGTACT | 2 cut(s) | 515, 931 |
| Bme1390I | CCNGG | 5 cut(s) | 1262, 1669, 2174, 3110, 3419 |
| Bme18I | GGWCC | 2 cut(s) | 691, 3027 |
| BmgBI | CACGTC | 1 cut(s) | 1236 |
| BmgT120I | GGNCC | 3 cut(s) | 691, 2845, 3027 |
| BmiI | GGNNCC | 7 cut(s) | 303, 330, 693, 2148, 3029, 3230, 3292 |
| BmrFI | CCNGG | 5 cut(s) | 1262, 1669, 2174, 3110, 3419 |
| BmrI | ACTGGG | 4 cut(s) | 1749, 2211, 3047, 3345 |
| BmsI | GCATC | 4 cut(s) | 759, 840, 1512, 2673 |
| BmuI | ACTGGG | 4 cut(s) | 1749, 2211, 3047, 3345 |
| BpiI | GAAGAC | 3 cut(s) | 23, 2133, 2899 |
| BpmI | CTGGAG | 1 cut(s) | 3017 |
| Bpu10I | CCTNAGC | 1 cut(s) | 363 |
| Bpu14I | TTCGAA | 1 cut(s) | 1692 |
| BpuEI | CTTGAG | 3 cut(s) | 100, 2456, 2960 |
| BpuMI | CCSGG | 1 cut(s) | 3419 |
| BsaBI | GATNNNNATC | 1 cut(s) | 2276 |
| BsaHI | GRCGYC | 2 cut(s) | 302, 329 |
| BsaI | GGTCTC | 2 cut(s) | 452, 3491 |
| BsaJI | CCNNGG | 9 cut(s) | 657, 1311, 1354, 1668, 1920, 2172, 2457, 3099, 3151 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 853, 883, 2367, 2397 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 99, 100, 643, 1189, 1412, 1855, 2178, 2731, 3037 |
| Bse3DI | GCAATG | 2 cut(s) | 1578, 1715 |
| Bse8I | GATNNNNATC | 1 cut(s) | 2276 |
| BseBI | CCWGG | 4 cut(s) | 1262, 1669, 2174, 3110 |
| BseDI | CCNNGG | 9 cut(s) | 657, 1311, 1354, 1668, 1920, 2172, 2457, 3099, 3151 |
| BseJI | GATNNNNATC | 1 cut(s) | 2276 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 99, 100, 643, 1189, 1412, 1855, 2178, 2731, 3037 |
| BseMI | GCAATG | 2 cut(s) | 1578, 1715 |
| BseMII | CTCAG | 2 cut(s) | 3509, 3515 |
| BseRI | GAGGAG | 2 cut(s) | 3005, 3368 |
| BseSI | GKGCMC | 3 cut(s) | 504, 1381, 2760 |
| BseXI | GCAGC | 4 cut(s) | 218, 1060, 1651, 1661 |
| BseYI | CCCAGC | 3 cut(s) | 1895, 2177, 2419 |
| BsgI | GTGCAG | 2 cut(s) | 1881, 2946 |
| Bsh1236I | CGCG | 2 cut(s) | 1798, 1980 |
| BshFI | GGCC | 8 cut(s) | 1219, 1260, 1353, 1515, 2030, 2699, 2846, 3108 |
| BshNI | GGYRCC | 2 cut(s) | 301, 328 |
| BsiHKAI | GWGCWC | 6 cut(s) | 504, 1929, 1986, 3068, 3349, 3543 |
| BsiSI | CCGG | 1 cut(s) | 3418 |
| BslFI | GGGAC | 1 cut(s) | 736 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 99, 100, 643, 1189, 1412, 1855, 2178, 2731, 3037 |
| BsmAI | GTCTC | 6 cut(s) | 452, 774, 1488, 3301, 3491, 3514 |
| BsmBI | CGTCTC | 2 cut(s) | 1488, 3301 |
| BsmFI | GGGAC | 1 cut(s) | 736 |
| BsmI | GAATGC | 1 cut(s) | 862 |
| BsnI | GGCC | 8 cut(s) | 1219, 1260, 1353, 1515, 2030, 2699, 2846, 3108 |
| Bso31I | GGTCTC | 2 cut(s) | 452, 3491 |
| Bsp119I | TTCGAA | 1 cut(s) | 1692 |
| Bsp1286I | GDGCHC | 8 cut(s) | 504, 1381, 1929, 1986, 2760, 3068, 3349, 3543 |
| Bsp1407I | TGTACA | 2 cut(s) | 2749, 3165 |
| Bsp19I | CCATGG | 3 cut(s) | 1311, 1354, 3099 |
| BspACI | CCGC | 8 cut(s) | 13, 1798, 1900, 1978, 2690, 2737, 3031, 3550 |
| BspANI | GGCC | 8 cut(s) | 1219, 1260, 1353, 1515, 2030, 2699, 2846, 3108 |
| BspCNI | CTCAG | 2 cut(s) | 3510, 3516 |
| BspFNI | CGCG | 2 cut(s) | 1798, 1980 |
| BspHI | TCATGA | 2 cut(s) | 1506, 3451 |
| BspLI | GGNNCC | 7 cut(s) | 303, 330, 693, 2148, 3029, 3230, 3292 |
| BspMAI | CTGCAG | 1 cut(s) | 2224 |
| BspMI | ACCTGC | 2 cut(s) | 1940, 2878 |
| BspPI | GGATC | 5 cut(s) | 860, 964, 1920, 3223, 3236 |
| BspT104I | TTCGAA | 1 cut(s) | 1692 |
| BspT107I | GGYRCC | 2 cut(s) | 301, 328 |
| BspTI | CTTAAG | 1 cut(s) | 775 |
| BspTNI | GGTCTC | 2 cut(s) | 452, 3491 |
| BsrBI | CCGCTC | 1 cut(s) | 2737 |
| BsrDI | GCAATG | 2 cut(s) | 1578, 1715 |
| BsrGI | TGTACA | 2 cut(s) | 2749, 3165 |
| BssECI | CCNNGG | 9 cut(s) | 657, 1311, 1354, 1668, 1920, 2172, 2457, 3099, 3151 |
| BssNAI | GTATAC | 1 cut(s) | 201 |
| BssNI | GRCGYC | 2 cut(s) | 302, 329 |
| BssT1I | CCWWGG | 7 cut(s) | 657, 1311, 1354, 1920, 2457, 3099, 3151 |
| Bst1107I | GTATAC | 1 cut(s) | 201 |
| Bst2UI | CCWGG | 4 cut(s) | 1262, 1669, 2174, 3110 |
| Bst4CI | ACNGT | 4 cut(s) | 1042, 1868, 3290, 3435 |
| Bst6I | CTCTTC | 1 cut(s) | 3023 |
| BstACI | GRCGYC | 2 cut(s) | 302, 329 |
| BstAFI | CTTAAG | 1 cut(s) | 775 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1073, 1343 |
| BstAUI | TGTACA | 2 cut(s) | 2749, 3165 |
| BstBI | TTCGAA | 1 cut(s) | 1692 |
| BstDEI | CTNAG | 7 cut(s) | 363, 786, 1780, 2252, 2424, 3518, 3524 |
| BstDSI | CCRYGG | 3 cut(s) | 1311, 1354, 3099 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1853 |
| BstFNI | CGCG | 2 cut(s) | 1798, 1980 |
| BstH2I | RGCGCY | 2 cut(s) | 305, 332 |
| BstHHI | GCGC | 4 cut(s) | 304, 331, 2775, 3322 |
| BstMAI | GTCTC | 6 cut(s) | 452, 774, 1488, 3301, 3491, 3514 |
| BstNI | CCWGG | 4 cut(s) | 1262, 1669, 2174, 3110 |
| BstNSI | RCATGY | 4 cut(s) | 620, 1305, 2638, 2893 |
| BstSCI | CCNGG | 5 cut(s) | 1260, 1667, 2172, 3108, 3417 |
| BstSFI | CTRYAG | 4 cut(s) | 861, 1163, 2220, 2767 |
| BstSLI | GKGCMC | 3 cut(s) | 504, 1381, 2760 |
| BstUI | CGCG | 2 cut(s) | 1798, 1980 |
| BstV1I | GCAGC | 4 cut(s) | 218, 1060, 1651, 1661 |
| BstV2I | GAAGAC | 3 cut(s) | 23, 2133, 2899 |
| BstX2I | RGATCY | 3 cut(s) | 865, 956, 3228 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3100 |
| BstYI | RGATCY | 3 cut(s) | 865, 956, 3228 |
| BstZ17I | GTATAC | 1 cut(s) | 201 |
| BsuI | GTATCC | 2 cut(s) | 24, 2991 |
| BsuRI | GGCC | 8 cut(s) | 1219, 1260, 1353, 1515, 2030, 2699, 2846, 3108 |
| BtgI | CCRYGG | 3 cut(s) | 1311, 1354, 3099 |
| BtrI | CACGTC | 1 cut(s) | 1236 |
| BtsI | GCAGTG | 2 cut(s) | 681, 1341 |
| BveI | ACCTGC | 2 cut(s) | 1940, 2878 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1343 |
| CciI | TCATGA | 2 cut(s) | 1506, 3451 |
| CfoI | GCGC | 4 cut(s) | 304, 331, 2775, 3322 |
| Cfr13I | GGNCC | 3 cut(s) | 691, 2845, 3027 |
| CseI | GACGC | 2 cut(s) | 161, 3437 |
| Csp6I | GTAC | 9 cut(s) | 514, 730, 930, 1160, 1293, 1433, 2750, 2887, 3166 |
| CviQI | GTAC | 9 cut(s) | 514, 730, 930, 1160, 1293, 1433, 2750, 2887, 3166 |
| DdeI | CTNAG | 7 cut(s) | 363, 786, 1780, 2252, 2424, 3518, 3524 |
| DinI | GGCGCC | 2 cut(s) | 303, 330 |
| DraI | TTTAAA | 4 cut(s) | 310, 606, 670, 3439 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 3146 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 3146 |
| EaeI | YGGCCR | 5 cut(s) | 1258, 1351, 1513, 2697, 3106 |
| Eam1104I | CTCTTC | 1 cut(s) | 3023 |
| EarI | CTCTTC | 1 cut(s) | 3023 |
| EciI | GGCGGA | 1 cut(s) | 28 |
| Ecl136II | GAGCTC | 2 cut(s) | 1984, 3066 |
| Eco130I | CCWWGG | 7 cut(s) | 657, 1311, 1354, 1920, 2457, 3099, 3151 |
| Eco24I | GRGCYC | 2 cut(s) | 1986, 3068 |
| Eco31I | GGTCTC | 2 cut(s) | 452, 3491 |
| Eco32I | GATATC | 2 cut(s) | 991, 1115 |
| Eco47I | GGWCC | 2 cut(s) | 691, 3027 |
| Eco53kI | GAGCTC | 2 cut(s) | 1984, 3066 |
| Eco57I | CTGAAG | 6 cut(s) | 143, 626, 1965, 2045, 3004, 3566 |
| EcoICRI | GAGCTC | 2 cut(s) | 1984, 3066 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1853 |
| EcoO109I | RGGNCCY | 1 cut(s) | 691 |
| EcoRII | CCWGG | 4 cut(s) | 1260, 1667, 2172, 3108 |
| EcoRV | GATATC | 2 cut(s) | 991, 1115 |
| EcoT14I | CCWWGG | 7 cut(s) | 657, 1311, 1354, 1920, 2457, 3099, 3151 |
| EcoT22I | ATGCAT | 1 cut(s) | 622 |
| EcoT38I | GRGCYC | 2 cut(s) | 1986, 3068 |
| EgeI | GGCGCC | 2 cut(s) | 303, 330 |
| EheI | GGCGCC | 2 cut(s) | 303, 330 |
| ErhI | CCWWGG | 7 cut(s) | 657, 1311, 1354, 1920, 2457, 3099, 3151 |
| Esp3I | CGTCTC | 2 cut(s) | 1488, 3301 |
| FaqI | GGGAC | 1 cut(s) | 736 |
| FauI | CCCGC | 1 cut(s) | 3038 |
| FbaI | TGATCA | 2 cut(s) | 678, 2947 |
| FblI | GTMKAC | 1 cut(s) | 200 |
| Fnu4HI | GCNGC | 6 cut(s) | 207, 1074, 1650, 1665, 1901, 2738 |
| FriOI | GRGCYC | 2 cut(s) | 1986, 3068 |
| Fsp4HI | GCNGC | 6 cut(s) | 207, 1074, 1650, 1665, 1901, 2738 |
| FspBI | CTAG | 6 cut(s) | 1446, 2415, 3152, 3368, 3536, 3564 |
| GlaI | GCGC | 4 cut(s) | 303, 330, 2774, 3321 |
| GluI | GCNGC | 6 cut(s) | 207, 1074, 1650, 1665, 1901, 2738 |
| GsaI | CCCAGC | 3 cut(s) | 1899, 2181, 2423 |
| GsuI | CTGGAG | 1 cut(s) | 3017 |
| HaeII | RGCGCY | 2 cut(s) | 305, 332 |
| HaeIII | GGCC | 8 cut(s) | 1219, 1260, 1353, 1515, 2030, 2699, 2846, 3108 |
| HapII | CCGG | 1 cut(s) | 3418 |
| HgaI | GACGC | 2 cut(s) | 161, 3437 |
| HhaI | GCGC | 4 cut(s) | 304, 331, 2775, 3322 |
| Hin1I | GRCGYC | 2 cut(s) | 302, 329 |
| Hin6I | GCGC | 4 cut(s) | 302, 329, 2773, 3320 |
| HinP1I | GCGC | 4 cut(s) | 302, 329, 2773, 3320 |
| HincII | GTYRAC | 4 cut(s) | 1753, 2227, 2867, 3139 |
| HindII | GTYRAC | 4 cut(s) | 1753, 2227, 2867, 3139 |
| HindIII | AAGCTT | 2 cut(s) | 1883, 2165 |
| HinfI | GANTC | 3 cut(s) | 782, 1634, 1825 |
| HpaI | GTTAAC | 1 cut(s) | 2227 |
| HpaII | CCGG | 1 cut(s) | 3418 |
| Hpy99I | CGWCG | 1 cut(s) | 3386 |
| HpyCH4III | ACNGT | 4 cut(s) | 1042, 1868, 3290, 3435 |
| HpyCH4IV | ACGT | 2 cut(s) | 1235, 2628 |
| HpyF3I | CTNAG | 7 cut(s) | 363, 786, 1780, 2252, 2424, 3518, 3524 |
| HpySE526I | ACGT | 2 cut(s) | 1235, 2628 |
| Hsp92I | GRCGYC | 2 cut(s) | 302, 329 |
| HspAI | GCGC | 4 cut(s) | 302, 329, 2773, 3320 |
| KasI | GGCGCC | 2 cut(s) | 301, 328 |
| Ksp22I | TGATCA | 2 cut(s) | 678, 2947 |
| KspAI | GTTAAC | 1 cut(s) | 2227 |
| LmnI | GCTCC | 7 cut(s) | 350, 1672, 1851, 1924, 2734, 3071, 3352 |
| Lsp1109I | GCAGC | 4 cut(s) | 218, 1060, 1651, 1661 |
| LweI | GCATC | 4 cut(s) | 759, 840, 1512, 2673 |
| MaeI | CTAG | 6 cut(s) | 1446, 2415, 3152, 3368, 3536, 3564 |
| MaeII | ACGT | 2 cut(s) | 1235, 2628 |
| MaeIII | GTNAC | 8 cut(s) | 833, 1304, 1415, 2041, 2113, 2563, 3157, 3370 |
| MbiI | CCGCTC | 1 cut(s) | 2737 |
| MflI | RGATCY | 3 cut(s) | 865, 956, 3228 |
| MhlI | GDGCHC | 8 cut(s) | 504, 1381, 1929, 1986, 2760, 3068, 3349, 3543 |
| MlsI | TGGCCA | 5 cut(s) | 1260, 1353, 1515, 2699, 3108 |
| MluNI | TGGCCA | 5 cut(s) | 1260, 1353, 1515, 2699, 3108 |
| Mly113I | GGCGCC | 2 cut(s) | 302, 329 |
| MlyI | GAGTC | 2 cut(s) | 776, 1834 |
| MmeI | TCCRAC | 3 cut(s) | 934, 1707, 3023 |
| Mox20I | TGGCCA | 5 cut(s) | 1260, 1353, 1515, 2699, 3108 |
| Mph1103I | ATGCAT | 1 cut(s) | 622 |
| MscI | TGGCCA | 5 cut(s) | 1260, 1353, 1515, 2699, 3108 |
| MslI | CAYNNNNRTG | 7 cut(s) | 132, 507, 845, 1300, 1938, 2780, 2968 |
| Msp20I | TGGCCA | 5 cut(s) | 1260, 1353, 1515, 2699, 3108 |
| MspA1I | CMGCKG | 2 cut(s) | 2120, 3024 |
| MspCI | CTTAAG | 1 cut(s) | 775 |
| MspI | CCGG | 1 cut(s) | 3418 |
| MspR9I | CCNGG | 5 cut(s) | 1262, 1669, 2174, 3110, 3419 |
| MssI | GTTTAAAC | 1 cut(s) | 3439 |
| Mva1269I | GAATGC | 1 cut(s) | 862 |
| MvaI | CCWGG | 4 cut(s) | 1262, 1669, 2174, 3110 |
| MvnI | CGCG | 2 cut(s) | 1798, 1980 |
| NarI | GGCGCC | 2 cut(s) | 302, 329 |
| NciI | CCSGG | 1 cut(s) | 3419 |
| NcoI | CCATGG | 3 cut(s) | 1311, 1354, 3099 |
| NlaIV | GGNNCC | 7 cut(s) | 303, 330, 693, 2148, 3029, 3230, 3292 |
| NmuCI | GTSAC | 5 cut(s) | 833, 1415, 2041, 3157, 3370 |
| NsiI | ATGCAT | 1 cut(s) | 622 |
| NspI | RCATGY | 4 cut(s) | 620, 1305, 2638, 2893 |
| NspV | TTCGAA | 1 cut(s) | 1692 |
| OliI | CACNNNNGTG | 1 cut(s) | 845 |
| PaeI | GCATGC | 2 cut(s) | 620, 2638 |
| PagI | TCATGA | 2 cut(s) | 1506, 3451 |
| PciI | ACATGT | 2 cut(s) | 1301, 2889 |
| PctI | GAATGC | 1 cut(s) | 862 |
| PfeI | GAWTC | 1 cut(s) | 1634 |
| PkrI | GCNGC | 6 cut(s) | 208, 1075, 1651, 1666, 1902, 2739 |
| PleI | GAGTC | 2 cut(s) | 776, 1833 |
| PluTI | GGCGCC | 2 cut(s) | 305, 332 |
| PmeI | GTTTAAAC | 1 cut(s) | 3439 |
| PpsI | GAGTC | 2 cut(s) | 776, 1833 |
| PpuMI | RGGWCCY | 1 cut(s) | 691 |
| PscI | ACATGT | 2 cut(s) | 1301, 2889 |
| PshBI | ATTAAT | 2 cut(s) | 2394, 2511 |
| Psp124BI | GAGCTC | 2 cut(s) | 1986, 3068 |
| Psp5II | RGGWCCY | 1 cut(s) | 691 |
| Psp6I | CCWGG | 4 cut(s) | 1260, 1667, 2172, 3108 |
| PspFI | CCCAGC | 3 cut(s) | 1895, 2177, 2419 |
| PspGI | CCWGG | 4 cut(s) | 1260, 1667, 2172, 3108 |
| PspN4I | GGNNCC | 7 cut(s) | 303, 330, 693, 2148, 3029, 3230, 3292 |
| PspPI | GGNCC | 3 cut(s) | 691, 2845, 3027 |
| PspPPI | RGGWCCY | 1 cut(s) | 691 |
| PstI | CTGCAG | 1 cut(s) | 2224 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1343 |
| PsuI | RGATCY | 3 cut(s) | 865, 956, 3228 |
| PvuII | CAGCTG | 2 cut(s) | 2120, 3024 |
| RsaI | GTAC | 9 cut(s) | 515, 731, 931, 1161, 1294, 1434, 2751, 2888, 3167 |
| RsaNI | GTAC | 9 cut(s) | 514, 730, 930, 1160, 1293, 1433, 2750, 2887, 3166 |
| RseI | CAYNNNNRTG | 7 cut(s) | 132, 507, 845, 1300, 1938, 2780, 2968 |
| SacI | GAGCTC | 2 cut(s) | 1986, 3068 |
| SatI | GCNGC | 6 cut(s) | 207, 1074, 1650, 1665, 1901, 2738 |
| Sau96I | GGNCC | 3 cut(s) | 691, 2845, 3027 |
| ScaI | AGTACT | 2 cut(s) | 515, 931 |
| SchI | GAGTC | 2 cut(s) | 776, 1834 |
| ScrFI | CCNGG | 5 cut(s) | 1262, 1669, 2174, 3110, 3419 |
| SduI | GDGCHC | 8 cut(s) | 504, 1381, 1929, 1986, 2760, 3068, 3349, 3543 |
| SfaNI | GCATC | 4 cut(s) | 759, 840, 1512, 2673 |
| SfcI | CTRYAG | 4 cut(s) | 861, 1163, 2220, 2767 |
| SfoI | GGCGCC | 2 cut(s) | 303, 330 |
| SfuI | TTCGAA | 1 cut(s) | 1692 |
| SinI | GGWCC | 2 cut(s) | 691, 3027 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 132, 507, 845, 1300, 1938, 2780, 2968 |
| SmlI | CTYRAG | 4 cut(s) | 115, 775, 2471, 2975 |
| SmoI | CTYRAG | 4 cut(s) | 115, 775, 2471, 2975 |
| SpeI | ACTAGT | 1 cut(s) | 1445 |
| SphI | GCATGC | 2 cut(s) | 620, 2638 |
| SsiI | CCGC | 8 cut(s) | 13, 1798, 1900, 1978, 2690, 2737, 3031, 3550 |
| SspDI | GGCGCC | 2 cut(s) | 301, 328 |
| SspI | AATATT | 1 cut(s) | 1841 |
| SspMI | CTAG | 6 cut(s) | 1446, 2415, 3152, 3368, 3536, 3564 |
| SstI | GAGCTC | 2 cut(s) | 1986, 3068 |
| StyD4I | CCNGG | 5 cut(s) | 1260, 1667, 2172, 3108, 3417 |
| StyI | CCWWGG | 7 cut(s) | 657, 1311, 1354, 1920, 2457, 3099, 3151 |
| TaaI | ACNGT | 4 cut(s) | 1042, 1868, 3290, 3435 |
| TaiI | ACGT | 2 cut(s) | 1238, 2631 |
| TaqI | TCGA | 9 cut(s) | 67, 188, 418, 545, 1331, 1599, 1692, 2053, 2312 |
| TatI | WGTACW | 6 cut(s) | 513, 729, 929, 1432, 2749, 3165 |
| TauI | GCSGC | 2 cut(s) | 1903, 2740 |
| TfiI | GAWTC | 1 cut(s) | 1634 |
| TseFI | GTSAC | 5 cut(s) | 833, 1415, 2041, 3157, 3370 |
| TseI | GCWGC | 4 cut(s) | 206, 1073, 1649, 1664 |
| Tsp45I | GTSAC | 5 cut(s) | 833, 1415, 2041, 3157, 3370 |
| TspGWI | ACGGA | 5 cut(s) | 20, 2108, 2714, 3107, 3283 |
| Vha464I | CTTAAG | 1 cut(s) | 775 |
| VneI | GTGCAC | 1 cut(s) | 500 |
| VpaK11BI | GGWCC | 2 cut(s) | 691, 3027 |
| VspI | ATTAAT | 2 cut(s) | 2394, 2511 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1853 |
| XapI | RAATTY | 4 cut(s) | 652, 665, 1553, 2462 |
| XceI | RCATGY | 4 cut(s) | 620, 1305, 2638, 2893 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3097 |
| XmaJI | CCTAGG | 1 cut(s) | 3151 |
| XmiI | GTMKAC | 1 cut(s) | 200 |
| XspI | CTAG | 6 cut(s) | 1446, 2415, 3152, 3368, 3536, 3564 |
| ZrmI | AGTACT | 2 cut(s) | 515, 931 |
| Zsp2I | ATGCAT | 1 cut(s) | 622 |