Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000002

Orthogroup ID

OG0011023

Physical Location & Seq

Genomic Coordinates Forward (+)

68364068 .. 68368876

Gene Structure 4809 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug02G0557000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGTCGTTCCTATTACCACCCACTATTGCGCTCAGTTCAGCCTGGTTCTTCAGTTTCAACAACTCCTACTTGATCTACAGGAATGATTCTGATTCCGAGACACGTGGCTTTCTCAGAGTCAACGGATCGAATGTCTTCAGCCCATTAGCAAAGTTCGAAGTGGTGACGGCCAATACTGGGACGGGACTAGTACATATCAGATGCTCTCAGAACAGAAAGTTCCTGCGAAGGAAATTTGAGAGTGATGTGCACCTTACTCCGGAGGCTGATGAACCAGAGGAGGACCAATCCAAATGGTCGTGTACATTATTTGAGCCTCAAGTAGCTGAAGATGGCAACCCCGACAAAGCCCGGTTGTTCCATGTCCAATCAAAACAATATGCAACAGCATGGGACATAGGTGGAGACCGTACTGGAGTAAGGGTCTTGAGGTTATATGGAGAGCAGCATGGTCAGAATATCTTCGATATCATCGACTTGGAGTCATTGGTGATGTTGCCAAACCATGTGGCCTTCAAAGCCAGCAACGGCCTTTACCTTCAGCGTGCGGACAATAATCAGCTCAGGTTCATATCCACCGATAAGGGGATTCCTGAGTCCTGGTTCGAAGTGTCCACGGATGGCCATGGAAGGGTGAAAATCAAGTCCTACCAAAACAATAGCTACTTCAGGTTCGGCGGCGGTGCCTACAGCAACTGGATTTTTGCTGACGGAGGCAGCAACGCCTTGAAACCTCCCACCGAATTTTGGCCAGTCAAGGTCGACAATAGTACGGTCGCTCTCAAATGCTTGAGCAACGACAAATTTTGCGCCCTACACACCTATGAGTTTGATTATACAGACGGTCTGAACGCGCCCGAAACTAGTACCAGCATTTCAAACGTTTCACGCTTCACGCTGGAAGAGCTTGTTTTCTCTAGGAGAATCTACAACACTGACTTCGACCTTAAGAATGCCATAATCTACGGCGAGACCCCGGTCACCATGGCCACCGCAAACGCCAGCAACAACACCTCAGCAGACAACACTGTGGAATTCAAGTTTGCGTACACGGAGAGTAAGAGCAGCACGTGGAGCGCCAGCCACTCGTGGATGGTGGGAGTGAGTGCCACCGCCAGCTTCAAAGTTCCATTCATCGGCGGTACTGAGGTCACTGCTTCCGCAGAATATTCCGGATCATACGAGTGGGGAGAGACAATTACATCAGAAAACACGTTGGAGACCACCTACACGGTTACAGTGCCGGCAAACACTTCGATATCTGTGAGTCTGATGGCGACTAAGGGAACTTGCGACGTGCCTTACTCTTATTATCAGCGGGACGTGCTTTATAACGGTAAAACCGTTGTCTATAAGAAAGATGACGGGCTGTACACGGGTGTTAATTCATACAACTTCCGCTATGAGGTTACAACACTGAAAGAGCCAGAAACTAGAGCTGATTTGCCGACCAGACAGCAGAAGTTGCCTGACCCATCGGTCGACCCCTCCATAGAACAAAAGCTACCTCTGCCCGTGCCGTCTGAATCAACCACCAGAGTGCAAAATAAGGTGACCTCGACCACCACCCCGGAGCAAGAGTTGTCAAAGCTGGGATTAGAAGATGCAGCCAGCTCTGCCATGAAACCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004012 GO:0005215 GO:0005319 GO:0005548 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005802 GO:0005886 GO:0006810 GO:0006811 GO:0006820 GO:0006869 GO:0006900 GO:0006996 GO:0008150 GO:0009987 GO:0010876 GO:0012505 GO:0015711 GO:0015748 GO:0015914 GO:0016020 GO:0016043 GO:0016050 GO:0016192 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0031984 GO:0033036 GO:0034204 GO:0042623 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0045332 GO:0048193 GO:0048194 GO:0051179 GO:0051234 GO:0061024 GO:0065007 GO:0065008 GO:0071702 GO:0071840 GO:0071944 GO:0097035 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cation_ATPase E1-E2_ATPase PhoLip_ATPase_C PhoLip_ATPase_N

Protein Analysis

543

Amino Acids

60.57

Weight (kDa)

5.21

Isoelectric Point (pI)

32.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Agglutinin	PF07468	19 - 136	1.5e-17	Agglutinin domain
Aerolysin	PF01117	314 - 437	1.6e-09	Aerolysin toxin
ETX_MTX2	PF03318	324 - 436	1.7e-08	Clostridium epsilon toxin ETX/Bacillus mosquitocidal toxin MTX2

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011023)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G27870 AT3G27870 AT3G27870
fragaria_vesca	FvH4_6g50810
malus_domestica	MD09G1032100.v1.1 MD17G1033800.v1.1
prunus_persica	Prupe.3G285900_v2.0.a1 Prupe.3G285900_v2.0.a1
pyrus_communis	pycom111g02540
rosa_chinensis	RchiOBHm_Chr2g0172201
rosa_laevigata	RLG00000022092
rosa_multiflora	Rmu_ssc0000252.1_g000050
rosa_roxburghii	Rroxscaffold_2G00080090
rosa_rugosa	Rorug02G0557000 Rorug02G0557100 Rorug02G0557200
rosa_samantha	Rh2AG632600 Rh2BG646200 Rh2DG660800
rosa_wichuraiana	Rw2G052370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1332
AasI	GACNNNNNNGTC	1 cut(s)	1478
AccB1I	GGYRCC	1 cut(s)	683
AccI	GTMKAC	2 cut(s)	762, 1482
AccII	CGCG	1 cut(s)	854
AccIII	TCCGGA	2 cut(s)	259, 1172
AciI	CCGC	9 cut(s)	548, 678, 681, 993, 1113, 1140, 1161, 1318, 1399
AclI	AACGTT	1 cut(s)	882
AclWI	GGATC	2 cut(s)	133, 1183
AcoI	YGGCCR	4 cut(s)	168, 622, 749, 987
AcsI	RAATTY	4 cut(s)	233, 743, 803, 1034
AcuI	CTGAAG	5 cut(s)	34, 121, 348, 524, 652
AcvI	CACGTG	2 cut(s)	104, 1071
AfaI	GTAC	8 cut(s)	192, 304, 412, 772, 868, 1049, 1144, 1373
AfiI	CCNNNNNNNGG	7 cut(s)	177, 259, 585, 631, 747, 1136, 1405
AflII	CTTAAG	1 cut(s)	947
AflIII	ACRYGT	2 cut(s)	101, 1212
AgsI	TTSAA	6 cut(s)	58, 517, 730, 879, 1039, 1123
AhdI	GACNNNNNGTC	1 cut(s)	481
AhlI	ACTAGT	2 cut(s)	187, 863
AjiI	CACGTC	2 cut(s)	1297, 1324
AjnI	CCWGG	2 cut(s)	41, 599
AleI	CACNNNNGTG	1 cut(s)	1538
AluBI	AGCT	9 cut(s)	326, 562, 663, 907, 1119, 1439, 1504, 1591, 1614
AluI	AGCT	9 cut(s)	326, 562, 663, 907, 1119, 1439, 1504, 1591, 1614
Alw21I	GWGCWC	1 cut(s)	252
Alw26I	GTCTC	5 cut(s)	92, 399, 965, 1187, 1214
Alw44I	GTGCAC	1 cut(s)	248
AlwI	GGATC	2 cut(s)	133, 1183
AlwNI	CAGNNNCTG	1 cut(s)	696
Aor13HI	TCCGGA	2 cut(s)	259, 1172
AoxI	GGCC	6 cut(s)	168, 510, 529, 622, 749, 987
ApaLI	GTGCAC	1 cut(s)	248
ApeKI	GCWGC	4 cut(s)	445, 717, 1065, 1607
ApoI	RAATTY	4 cut(s)	233, 743, 803, 1034
Asp700I	GAANNNNTTC	2 cut(s)	134, 461
AspLEI	GCGC	4 cut(s)	31, 812, 856, 1079
AspS9I	GGNCC	1 cut(s)	283
AsuC2I	CCSGG	3 cut(s)	352, 977, 1571
AsuHPI	GGTGA	5 cut(s)	175, 502, 646, 973, 1564
AsuII	TTCGAA	2 cut(s)	156, 606
AvaII	GGWCC	1 cut(s)	283
BaeGI	GKGCMC	1 cut(s)	252
BaeI	ACNNNNGTAYC	2 cut(s)	1134, 1167
BalI	TGGCCA	3 cut(s)	624, 751, 989
BanI	GGYRCC	1 cut(s)	683
BauI	CACGAG	1 cut(s)	1087
BbrPI	CACGTG	2 cut(s)	104, 1071
BbsI	GAAGAC	1 cut(s)	127
Bbv12I	GWGCWC	1 cut(s)	252
BbvCI	CCTCAGC	1 cut(s)	1015
BbvI	GCAGC	4 cut(s)	457, 729, 1077, 1619
BccI	CCATC	5 cut(s)	326, 614, 1087, 1267, 1483
BceAI	ACGGC	4 cut(s)	183, 544, 982, 1504
BcgI	CGANNNNNNTGC	2 cut(s)	1236, 1270
BciT130I	CCWGG	2 cut(s)	43, 601
BcnI	CCSGG	3 cut(s)	352, 977, 1571
BcoDI	GTCTC	5 cut(s)	92, 399, 965, 1187, 1214
BcuI	ACTAGT	2 cut(s)	187, 863
BfaI	CTAG	5 cut(s)	188, 864, 918, 1434, 1630
BfmI	CTRYAG	2 cut(s)	76, 688
BfoI	RGCGCY	1 cut(s)	1080
BfrI	CTTAAG	1 cut(s)	947
BisI	GCNGC	5 cut(s)	446, 679, 718, 1066, 1608
BlsI	GCNGC	5 cut(s)	447, 680, 719, 1067, 1609
Bme1390I	CCNGG	5 cut(s)	43, 352, 601, 977, 1571
Bme18I	GGWCC	1 cut(s)	283
BmeRI	GACNNNNNGTC	1 cut(s)	481
BmgBI	CACGTC	2 cut(s)	1297, 1324
BmgT120I	GGNCC	1 cut(s)	283
BmiI	GGNNCC	1 cut(s)	685
BmrFI	CCNGG	5 cut(s)	43, 352, 601, 977, 1571
BmrI	ACTGGG	1 cut(s)	186
BmsI	GCATC	2 cut(s)	191, 1594
BmuI	ACTGGG	1 cut(s)	186
BoxI	GACNNNNGTC	1 cut(s)	977
BpiI	GAAGAC	1 cut(s)	127
BpmI	CTGGAG	1 cut(s)	435
Bpu10I	CCTNAGC	2 cut(s)	563, 1015
Bpu14I	TTCGAA	2 cut(s)	156, 606
BpuEI	CTTGAG	3 cut(s)	303, 448, 811
BpuMI	CCSGG	3 cut(s)	352, 977, 1571
BsaAI	YACGTR	2 cut(s)	104, 1071
BsaI	GGTCTC	3 cut(s)	399, 965, 1214
BsaJI	CCNNGG	5 cut(s)	615, 625, 975, 984, 1569
BsaWI	WCCGGW	2 cut(s)	259, 1172
BsaXI	ACNNNNNCTCC	4 cut(s)	408, 438, 1565, 1595
Bsc4I	CCNNNNNNNGG	7 cut(s)	177, 259, 585, 631, 747, 1136, 1405
Bse118I	RCCGGY	1 cut(s)	1243
Bse1I	ACTGG	4 cut(s)	181, 418, 701, 752
BseAI	TCCGGA	2 cut(s)	259, 1172
BseBI	CCWGG	2 cut(s)	43, 601
BseDI	CCNNGG	5 cut(s)	615, 625, 975, 984, 1569
BseGI	GGATG	2 cut(s)	625, 1098
BseLI	CCNNNNNNNGG	7 cut(s)	177, 259, 585, 631, 747, 1136, 1405
BseMII	CTCAG	7 cut(s)	46, 127, 221, 577, 585, 1029, 1137
BseNI	ACTGG	4 cut(s)	181, 418, 701, 752
BseRI	GAGGAG	1 cut(s)	293
BseSI	GKGCMC	1 cut(s)	252
BseXI	GCAGC	4 cut(s)	457, 729, 1077, 1619
BseYI	CCCAGC	1 cut(s)	1591
Bsh1236I	CGCG	1 cut(s)	854
Bsh1285I	CGRYCG	2 cut(s)	777, 1482
BshFI	GGCC	6 cut(s)	170, 512, 531, 624, 751, 989
BshNI	GGYRCC	1 cut(s)	683
BsiEI	CGRYCG	2 cut(s)	777, 1482
BsiHKAI	GWGCWC	1 cut(s)	252
BsiSI	CCGG	6 cut(s)	260, 352, 977, 1173, 1244, 1571
BslFI	GGGAC	4 cut(s)	193, 198, 407, 1334
BslI	CCNNNNNNNGG	7 cut(s)	177, 259, 585, 631, 747, 1136, 1405
BsmAI	GTCTC	5 cut(s)	92, 399, 965, 1187, 1214
BsmFI	GGGAC	4 cut(s)	193, 198, 407, 1334
BsmI	GAATGC	1 cut(s)	958
BsnI	GGCC	6 cut(s)	170, 512, 531, 624, 751, 989
Bso31I	GGTCTC	3 cut(s)	399, 965, 1214
Bsp119I	TTCGAA	2 cut(s)	156, 606
Bsp1286I	GDGCHC	1 cut(s)	252
Bsp13I	TCCGGA	2 cut(s)	259, 1172
Bsp1407I	TGTACA	2 cut(s)	302, 1371
Bsp143I	GATC	3 cut(s)	72, 125, 1175
Bsp19I	CCATGG	2 cut(s)	625, 984
BspACI	CCGC	9 cut(s)	548, 678, 681, 993, 1113, 1140, 1161, 1318, 1399
BspANI	GGCC	6 cut(s)	170, 512, 531, 624, 751, 989
BspCNI	CTCAG	7 cut(s)	45, 126, 220, 576, 586, 1028, 1138
BspEI	TCCGGA	2 cut(s)	259, 1172
BspFNI	CGCG	1 cut(s)	854
BspLI	GGNNCC	1 cut(s)	685
BspPI	GGATC	2 cut(s)	133, 1183
BspQI	GCTCTTC	1 cut(s)	897
BspT104I	TTCGAA	2 cut(s)	156, 606
BspT107I	GGYRCC	1 cut(s)	683
BspTI	CTTAAG	1 cut(s)	947
BspTNI	GGTCTC	3 cut(s)	399, 965, 1214
BsrFI	RCCGGY	1 cut(s)	1243
BsrGI	TGTACA	2 cut(s)	302, 1371
BsrI	ACTGG	4 cut(s)	181, 418, 701, 752
BssAI	RCCGGY	1 cut(s)	1243
BssECI	CCNNGG	5 cut(s)	615, 625, 975, 984, 1569
BssMI	GATC	3 cut(s)	72, 125, 1175
BssSI	CACGAG	1 cut(s)	1087
BssT1I	CCWWGG	2 cut(s)	625, 984
Bst2BI	CACGAG	1 cut(s)	1087
Bst2UI	CCWGG	2 cut(s)	43, 601
Bst4CI	ACNGT	8 cut(s)	410, 775, 845, 1030, 1234, 1240, 1337, 1345
Bst6I	CTCTTC	1 cut(s)	897
BstAFI	CTTAAG	1 cut(s)	947
BstAPI	GCANNNNNTGC	1 cut(s)	1465
BstAUI	TGTACA	2 cut(s)	302, 1371
BstBAI	YACGTR	2 cut(s)	104, 1071
BstBI	TTCGAA	2 cut(s)	156, 606
BstC8I	GCNNGC	7 cut(s)	523, 546, 1003, 1081, 1117, 1245, 1612
BstDEI	CTNAG	8 cut(s)	32, 113, 207, 563, 594, 1015, 1146, 1281
BstDSI	CCRYGG	3 cut(s)	615, 625, 984
BstEII	GGTNACC	2 cut(s)	979, 1552
BstF5I	GGATG	2 cut(s)	625, 1098
BstFNI	CGCG	1 cut(s)	854
BstH2I	RGCGCY	1 cut(s)	1080
BstHHI	GCGC	4 cut(s)	31, 812, 856, 1079
BstKTI	GATC	3 cut(s)	75, 128, 1178
BstMAI	GTCTC	5 cut(s)	92, 399, 965, 1187, 1214
BstMBI	GATC	3 cut(s)	72, 125, 1175
BstMCI	CGRYCG	2 cut(s)	777, 1482
BstMWI	GCNNNNNNNGC	7 cut(s)	518, 904, 1074, 1324, 1465, 1510, 1616
BstNI	CCWGG	2 cut(s)	43, 601
BstPAI	GACNNNNGTC	1 cut(s)	977
BstPI	GGTNACC	2 cut(s)	979, 1552
BstSCI	CCNGG	5 cut(s)	41, 350, 599, 975, 1569
BstSFI	CTRYAG	2 cut(s)	76, 688
BstSLI	GKGCMC	1 cut(s)	252
BstUI	CGCG	1 cut(s)	854
BstV1I	GCAGC	4 cut(s)	457, 729, 1077, 1619
BstV2I	GAAGAC	1 cut(s)	127
BsuRI	GGCC	6 cut(s)	170, 512, 531, 624, 751, 989
BtgI	CCRYGG	3 cut(s)	615, 625, 984
BtrI	CACGTC	2 cut(s)	1297, 1324
BtsCI	GGATG	2 cut(s)	625, 1098
BtsI	GCAGTG	1 cut(s)	1152
BtsIMutI	CAGTG	5 cut(s)	933, 1026, 1152, 1245, 1415
Cac8I	GCNNGC	7 cut(s)	523, 546, 1003, 1081, 1117, 1245, 1612
CaiI	CAGNNNCTG	1 cut(s)	696
CfoI	GCGC	4 cut(s)	31, 812, 856, 1079
Cfr10I	RCCGGY	1 cut(s)	1243
Cfr13I	GGNCC	1 cut(s)	283
Csp6I	GTAC	8 cut(s)	191, 303, 411, 771, 867, 1048, 1143, 1372
CspCI	CAANNNNNGTGG	2 cut(s)	489, 524
CviAII	CATG	7 cut(s)	362, 390, 449, 506, 626, 985, 1621
CviQI	GTAC	8 cut(s)	191, 303, 411, 771, 867, 1048, 1143, 1372
DdeI	CTNAG	8 cut(s)	32, 113, 207, 563, 594, 1015, 1146, 1281
DpnI	GATC	3 cut(s)	74, 127, 1177
DpnII	GATC	3 cut(s)	72, 125, 1175
DrdI	GACNNNNNNGTC	1 cut(s)	1478
DriI	GACNNNNNGTC	1 cut(s)	481
DseDI	GACNNNNNNGTC	1 cut(s)	1478
EaeI	YGGCCR	4 cut(s)	168, 622, 749, 987
Eam1104I	CTCTTC	1 cut(s)	897
Eam1105I	GACNNNNNGTC	1 cut(s)	481
EarI	CTCTTC	1 cut(s)	897
Eco130I	CCWWGG	2 cut(s)	625, 984
Eco31I	GGTCTC	3 cut(s)	399, 965, 1214
Eco32I	GATATC	2 cut(s)	469, 1260
Eco47I	GGWCC	1 cut(s)	283
Eco57I	CTGAAG	5 cut(s)	34, 121, 348, 524, 652
Eco72I	CACGTG	2 cut(s)	104, 1071
Eco91I	GGTNACC	2 cut(s)	979, 1552
EcoO65I	GGTNACC	2 cut(s)	979, 1552
EcoRI	GAATTC	1 cut(s)	1034
EcoRII	CCWGG	2 cut(s)	41, 599
EcoRV	GATATC	2 cut(s)	469, 1260
EcoT14I	CCWWGG	2 cut(s)	625, 984
ErhI	CCWWGG	2 cut(s)	625, 984
FaeI	CATG	7 cut(s)	365, 393, 452, 509, 629, 988, 1624
FaqI	GGGAC	4 cut(s)	193, 198, 407, 1334
FatI	CATG	7 cut(s)	361, 389, 448, 505, 625, 984, 1620
FauI	CCCGC	1 cut(s)	1311
FblI	GTMKAC	2 cut(s)	762, 1482
Fnu4HI	GCNGC	5 cut(s)	446, 679, 718, 1066, 1608
FokI	GGATG	2 cut(s)	632, 1105
Fsp4HI	GCNGC	5 cut(s)	446, 679, 718, 1066, 1608
FspBI	CTAG	5 cut(s)	188, 864, 918, 1434, 1630
GlaI	GCGC	4 cut(s)	30, 811, 855, 1078
GluI	GCNGC	5 cut(s)	446, 679, 718, 1066, 1608
GsaI	CCCAGC	1 cut(s)	1595
GsuI	CTGGAG	1 cut(s)	435
HaeII	RGCGCY	1 cut(s)	1080
HaeIII	GGCC	6 cut(s)	170, 512, 531, 624, 751, 989
HapII	CCGG	6 cut(s)	260, 352, 977, 1173, 1244, 1571
HhaI	GCGC	4 cut(s)	31, 812, 856, 1079
Hin1II	CATG	7 cut(s)	365, 393, 452, 509, 629, 988, 1624
Hin6I	GCGC	4 cut(s)	29, 810, 854, 1077
HinP1I	GCGC	4 cut(s)	29, 810, 854, 1077
HincII	GTYRAC	3 cut(s)	121, 763, 1483
HindII	GTYRAC	3 cut(s)	121, 763, 1483
HinfI	GANTC	9 cut(s)	86, 92, 117, 482, 589, 596, 924, 1267, 1526
HpaII	CCGG	6 cut(s)	260, 352, 977, 1173, 1244, 1571
HphI	GGTGA	5 cut(s)	175, 502, 646, 973, 1564
Hpy166II	GTNNAC	8 cut(s)	121, 250, 303, 615, 763, 1050, 1374, 1483
Hpy188III	TCNNGA	4 cut(s)	260, 427, 593, 1173
Hpy8I	GTNNAC	8 cut(s)	121, 250, 303, 615, 763, 1050, 1374, 1483
Hpy99I	CGWCG	1 cut(s)	1298
HpyAV	CCTTC	4 cut(s)	222, 523, 548, 624
HpyCH4III	ACNGT	8 cut(s)	410, 775, 845, 1030, 1234, 1240, 1337, 1345
HpyCH4IV	ACGT	6 cut(s)	103, 882, 1070, 1214, 1296, 1323
HpyCH4V	TGCA	4 cut(s)	250, 383, 1543, 1607
HpyF10VI	GCNNNNNNNGC	7 cut(s)	518, 904, 1074, 1324, 1465, 1510, 1616
HpyF3I	CTNAG	8 cut(s)	32, 113, 207, 563, 594, 1015, 1146, 1281
HpySE526I	ACGT	6 cut(s)	103, 882, 1070, 1214, 1296, 1323
Hsp92II	CATG	7 cut(s)	365, 393, 452, 509, 629, 988, 1624
HspAI	GCGC	4 cut(s)	29, 810, 854, 1077
Kpn2I	TCCGGA	2 cut(s)	259, 1172
KroI	GCCGGC	1 cut(s)	1243
KroNI	GCCGGC	1 cut(s)	1245
Kzo9I	GATC	3 cut(s)	72, 125, 1175
LguI	GCTCTTC	1 cut(s)	897
LmnI	GCTCC	2 cut(s)	1074, 1573
Lsp1109I	GCAGC	4 cut(s)	457, 729, 1077, 1619
LweI	GCATC	2 cut(s)	191, 1594
MaeI	CTAG	5 cut(s)	188, 864, 918, 1434, 1630
MaeII	ACGT	6 cut(s)	103, 882, 1070, 1214, 1296, 1323
MaeIII	GTNAC	6 cut(s)	163, 979, 1150, 1234, 1408, 1552
MalI	GATC	3 cut(s)	74, 127, 1177
MboI	GATC	3 cut(s)	72, 125, 1175
MboII	GAAGA	6 cut(s)	40, 127, 341, 454, 914, 1613
MhlI	GDGCHC	1 cut(s)	252
MlsI	TGGCCA	3 cut(s)	624, 751, 989
MluCI	AATT	6 cut(s)	233, 743, 803, 1034, 1197, 1384
MluNI	TGGCCA	3 cut(s)	624, 751, 989
MlyI	GAGTC	4 cut(s)	126, 491, 605, 1276
MmeI	TCCRAC	1 cut(s)	1197
Mox20I	TGGCCA	3 cut(s)	624, 751, 989
MroI	TCCGGA	2 cut(s)	259, 1172
MroNI	GCCGGC	1 cut(s)	1243
MroXI	GAANNNNTTC	2 cut(s)	134, 461
MscI	TGGCCA	3 cut(s)	624, 751, 989
MseI	TTAA	2 cut(s)	948, 1383
MslI	CAYNNNNRTG	3 cut(s)	822, 1183, 1538
Msp20I	TGGCCA	3 cut(s)	624, 751, 989
MspA1I	CMGCKG	1 cut(s)	1318
MspCI	CTTAAG	1 cut(s)	947
MspI	CCGG	6 cut(s)	260, 352, 977, 1173, 1244, 1571
MspR9I	CCNGG	5 cut(s)	43, 352, 601, 977, 1571
Mva1269I	GAATGC	1 cut(s)	958
MvaI	CCWGG	2 cut(s)	43, 601
MvnI	CGCG	1 cut(s)	854
MwoI	GCNNNNNNNGC	7 cut(s)	518, 904, 1074, 1324, 1465, 1510, 1616
NaeI	GCCGGC	1 cut(s)	1245
NciI	CCSGG	3 cut(s)	352, 977, 1571
NcoI	CCATGG	2 cut(s)	625, 984
NdeII	GATC	3 cut(s)	72, 125, 1175
NgoMIV	GCCGGC	1 cut(s)	1243
NlaIII	CATG	7 cut(s)	365, 393, 452, 509, 629, 988, 1624
NlaIV	GGNNCC	1 cut(s)	685
NmuCI	GTSAC	4 cut(s)	163, 979, 1150, 1552
NspV	TTCGAA	2 cut(s)	156, 606
OliI	CACNNNNGTG	1 cut(s)	1538
PciSI	GCTCTTC	1 cut(s)	897
PcsI	WCGNNNNNNNCGW	2 cut(s)	471, 1341
PctI	GAATGC	1 cut(s)	958
PdiI	GCCGGC	1 cut(s)	1245
PdmI	GAANNNNTTC	2 cut(s)	134, 461
PfeI	GAWTC	5 cut(s)	86, 92, 589, 924, 1526
PkrI	GCNGC	5 cut(s)	447, 680, 719, 1067, 1609
PleI	GAGTC	4 cut(s)	125, 490, 604, 1275
PmaCI	CACGTG	2 cut(s)	104, 1071
PmlI	CACGTG	2 cut(s)	104, 1071
PpsI	GAGTC	4 cut(s)	125, 490, 604, 1275
Ppu21I	YACGTR	2 cut(s)	104, 1071
PshAI	GACNNNNGTC	1 cut(s)	977
PsiI	TTATAA	1 cut(s)	1332
Psp1406I	AACGTT	1 cut(s)	882
Psp6I	CCWGG	2 cut(s)	41, 599
PspCI	CACGTG	2 cut(s)	104, 1071
PspEI	GGTNACC	2 cut(s)	979, 1552
PspFI	CCCAGC	1 cut(s)	1591
PspGI	CCWGG	2 cut(s)	41, 599
PspN4I	GGNNCC	1 cut(s)	685
PspPI	GGNCC	1 cut(s)	283
PsrI	GAACNNNNNNTAC	2 cut(s)	1488, 1520
PstNI	CAGNNNCTG	1 cut(s)	696
RsaI	GTAC	8 cut(s)	192, 304, 412, 772, 868, 1049, 1144, 1373
RsaNI	GTAC	8 cut(s)	191, 303, 411, 771, 867, 1048, 1143, 1372
RseI	CAYNNNNRTG	3 cut(s)	822, 1183, 1538
SalI	GTCGAC	2 cut(s)	761, 1481
SapI	GCTCTTC	1 cut(s)	897
SaqAI	TTAA	2 cut(s)	948, 1383
SatI	GCNGC	5 cut(s)	446, 679, 718, 1066, 1608
Sau3AI	GATC	3 cut(s)	72, 125, 1175
Sau96I	GGNCC	1 cut(s)	283
SchI	GAGTC	4 cut(s)	126, 491, 605, 1276
ScrFI	CCNGG	5 cut(s)	43, 352, 601, 977, 1571
SduI	GDGCHC	1 cut(s)	252
SfaNI	GCATC	2 cut(s)	191, 1594
SfcI	CTRYAG	2 cut(s)	76, 688
SfuI	TTCGAA	2 cut(s)	156, 606
SinI	GGWCC	1 cut(s)	283
SmiMI	CAYNNNNRTG	3 cut(s)	822, 1183, 1538
SmlI	CTYRAG	4 cut(s)	318, 427, 790, 947
SmoI	CTYRAG	4 cut(s)	318, 427, 790, 947
SpeI	ACTAGT	2 cut(s)	187, 863
Sse9I	AATT	6 cut(s)	233, 743, 803, 1034, 1197, 1384
SsiI	CCGC	9 cut(s)	548, 678, 681, 993, 1113, 1140, 1161, 1318, 1399
SspI	AATATT	1 cut(s)	1169
SspMI	CTAG	5 cut(s)	188, 864, 918, 1434, 1630
StyD4I	CCNGG	5 cut(s)	41, 350, 599, 975, 1569
StyI	CCWWGG	2 cut(s)	625, 984
TaaI	ACNGT	8 cut(s)	410, 775, 845, 1030, 1234, 1240, 1337, 1345
TaiI	ACGT	6 cut(s)	106, 885, 1073, 1217, 1299, 1326
TaqII	GACCGA	1 cut(s)	1468
TasI	AATT	6 cut(s)	233, 743, 803, 1034, 1197, 1384
TatI	WGTACW	3 cut(s)	190, 302, 1371
TauI	GCSGC	1 cut(s)	681
TfiI	GAWTC	5 cut(s)	86, 92, 589, 924, 1526
Tru1I	TTAA	2 cut(s)	948, 1383
Tru9I	TTAA	2 cut(s)	948, 1383
TscAI	CASTG	5 cut(s)	940, 1033, 1159, 1245, 1422
TseFI	GTSAC	4 cut(s)	163, 979, 1150, 1552
TseI	GCWGC	4 cut(s)	445, 717, 1065, 1607
Tsp45I	GTSAC	4 cut(s)	163, 979, 1150, 1552
TspDTI	ATGAA	4 cut(s)	285, 559, 1123, 1377
TspGWI	ACGGA	4 cut(s)	138, 632, 726, 1067
TspRI	CASTG	5 cut(s)	940, 1033, 1159, 1245, 1422
Vha464I	CTTAAG	1 cut(s)	947
VneI	GTGCAC	1 cut(s)	248
VpaK11BI	GGWCC	1 cut(s)	283
XapI	RAATTY	4 cut(s)	233, 743, 803, 1034
XmiI	GTMKAC	2 cut(s)	762, 1482
XmnI	GAANNNNTTC	2 cut(s)	134, 461
XspI	CTAG	5 cut(s)	188, 864, 918, 1434, 1630

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.