FvH4_6g51780

TruB family pseudouridylate synthase (N terminal domain)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0014138
Physical Location & Seq
Reverse (-)
38321263 .. 38324646
3384 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g51780.t1

Sequence Viewer

Length: 1512 bp
ATGGCTAAACCAGTCTCACTGTCTCTTCTCTTCCTTCGCCCCACTACACTCTCCCGCCTTCTCCCTCACCCCCACCCAACTCTCACCCGCGCCAGAACCCGCCCCCTCCTCTCTCTCCCATGCCGCCCCAATACGCCGTCGTTTTCAACCACCTCCACTCCATTCCCTCTCCAGTACGACCTCATCATCAACCGCCCCACCCAGTCCTCCCTCGACCGCCTTCCCGCCCGCGCCGCCAATCCCGATAAAAACAACTCCTCCATTTCCGACTCCGATTCTTCGCCGGAGAAGCCCAACGAATTAGGCTTCGACAACTGGCTGGACCAGAAGCTCAGCGACGATCCGATGGAGAAGTCGAAGAGGAAGTACTACAACAAGAGGAGGAAGCGGATGTACGGCGGCGATTCGGAGGAGGAGGAGGAGAAGCGGCGGGAGGAGGAGAGGCTGGTGGAGCTGAAGCCGGAGGTGGTGGAGTTCAACACTTTGCATAAGAGAGAGGAGGAGCTTTACTTCTACGACACGTTTGCGTATCCGTGGGAGAAGGACAAGCATTACAAGATGGTGTACCGGCTCGAGAAGAAGTACTATCCTGATCAGTGTCTAGATAAGGCCTTTCTCGAACCCGGCGAAAAGAATCCACCTAATAAGAAGAAGATAGAGCATGATGATAAAGGAATGGTGTTCTTTGAGGAGGGGAAGGTGAGAGAACCGGTTGCGGCGAAAGATGTTAAGGAGAAGAAGGTGGAGGAGTTTTTCAAGTGTTTGAAGAAAGGCCCCAGTGAAGAGGAGGGGGAGCCGTATTTGCTGACGAGGAGTAGTGAGCTGCCTCCCAGGTGGGACGGGCCGTATGGGACTGTGGTTTTGGTGAACAAACCGAAAGGATGGACATCTTTTACAGTTTGTGGGAAGCTGCGGCGCCTGGTCAAAGTGAAGAAGGTAGGGCATGCCGGAACGCTTGATCCGATGGCAACTGGATTGTTAATTGTATGTGTTGGTAAAGCTACTAAGGTTGTGGACAGCTATCAGGGTATGACCAAGGGTTACAGTGGAGTTTTCCGTTTGGGGGAGGCTACTTCGACTTGGGATGCTGATTCACCGGTCATTCAGCGCGAGCCATGGGAGCATATCAAAGATGAAGATATAAAGAAAGCTGCTGCATCCTTTTGTGGAGAGATATGGCAAGTACCTCCAATGTTTTCTGCCATCAAAGTTGGAGGTGAAAAGATGTATGAGAAGGCAAGGAGAGGAGAAAGCATTGAGCTCTCACCCAGACGGATATCAATATATCAGTTTGATATTGAGCGCAGCTTAGATGACAGACAAAACTTGATTTTCCGGGTTACTTGCTCTAAAGGGACATATATTAGATCTCTATGTGCCGATTTGGGGAAAGCTCTCGGCAGTTGTGCTCATTTAACTGCTCTTCGAAGAGATTCAATTGGGGAATATTCTGCAGATAATGCATGGGACTTCAAAGAGCTGGAGGATGCAATTACCAAAACGTATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TruB_C_2 TruB_N

Protein Analysis

504

Amino Acids

57.77

Weight (kDa)

8.67

Isoelectric Point (pI)

53.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TruB_N PF01509 305 - 455 1.3e-53 TruB family pseudouridylate synthase (N terminal domain)
TruB_C_2 PF16198 456 - 499 2.1e-09 tRNA pseudouridylate synthase B C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014138)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14460
fragaria_vesca FvH4_6g51780 FvH4_6g51780
malus_domestica MD17G1022100.v1.1
prunus_persica Prupe.3G294000_v2.0.a1
pyrus_communis pycom17g01920
rosa_chinensis RchiOBHm_Chr2g0173311
rosa_laevigata RLG00000022178
rosa_multiflora Rmu_sc0010961.1_g000005
rosa_roxburghii Rroxscaffold_2G00079060
rosa_rugosa Rorug02G0567200 Rorug02G0567300
rosa_samantha Rh2AG647600 Rh2BG658100 Rh2CG623500 Rh2DG671900
rosa_wichuraiana Rw2G053160

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 915
AccII CGCG 3 cut(s) 90, 231, 1110
AclWI GGATC 2 cut(s) 335, 953
AcuI CTGAAG 1 cut(s) 476
AcyI GRCGYC 1 cut(s) 916
AfaI GTAC 6 cut(s) 176, 368, 395, 566, 584, 1185
AfiI CCNNNNNNNGG 2 cut(s) 1063, 1386
AflIII ACRYGT 1 cut(s) 519
AgeI ACCGGT 2 cut(s) 709, 1096
AgsI TTSAA 6 cut(s) 147, 478, 757, 766, 1437, 1474
AjnI CCWGG 2 cut(s) 830, 918
AjuI GAANNNNNNNTTGG 1 cut(s) 1490
AloI GAACNNNNNNTCC 2 cut(s) 943, 975
Alw21I GWGCWC 2 cut(s) 1263, 1411
Alw26I GTCTC 2 cut(s) 19, 27
AlwI GGATC 2 cut(s) 335, 953
Ama87I CYCGRG 1 cut(s) 572
AoxI GGCC 3 cut(s) 609, 772, 842
ApeKI GCWGC 5 cut(s) 823, 910, 1151, 1154, 1305
ArsI GACNNNNNNTTYG 2 cut(s) 844, 876
AsiGI ACCGGT 2 cut(s) 709, 1096
Asp700I GAANNNNTTC 1 cut(s) 1432
AspLEI GCGC 5 cut(s) 92, 233, 918, 1110, 1305
AspS9I GGNCC 3 cut(s) 322, 773, 842
AsuC2I CCSGG 2 cut(s) 624, 1337
AsuHPI GGTGA 7 cut(s) 59, 76, 712, 877, 1086, 1229, 1257
AsuII TTCGAA 1 cut(s) 1426
AvaI CYCGRG 1 cut(s) 572
AvaII GGWCC 1 cut(s) 322
BanI GGYRCC 1 cut(s) 915
BanII GRGCYC 1 cut(s) 1263
BarI GAAGNNNNNNTAC 4 cut(s) 350, 377, 382, 409
Bbv12I GWGCWC 2 cut(s) 1263, 1411
BbvI GCAGC 5 cut(s) 810, 897, 1138, 1141, 1317
BccI CCATC 5 cut(s) 340, 553, 876, 958, 1211
BceAI ACGGC 4 cut(s) 121, 412, 781, 829
BcgI CGANNNNNNTGC 2 cut(s) 506, 540
BciT130I CCWGG 2 cut(s) 832, 920
BciVI GTATCC 1 cut(s) 540
BclI TGATCA 1 cut(s) 592
BcnI CCSGG 2 cut(s) 624, 1337
BcoDI GTCTC 2 cut(s) 19, 27
BfaI CTAG 2 cut(s) 602, 1510
BfmI CTRYAG 1 cut(s) 1452
BfoI RGCGCY 1 cut(s) 919
BfuI GTATCC 1 cut(s) 540
BglII AGATCT 1 cut(s) 1367
BlpI GCTNAGC 1 cut(s) 332
BmcAI AGTACT 2 cut(s) 368, 584
Bme1390I CCNGG 4 cut(s) 624, 832, 920, 1337
Bme18I GGWCC 1 cut(s) 322
BmeT110I CYCGRG 1 cut(s) 572
BmgT120I GGNCC 3 cut(s) 322, 773, 842
BmiI GGNNCC 3 cut(s) 775, 795, 917
BmrFI CCNGG 4 cut(s) 624, 832, 920, 1337
BmrI ACTGGG 2 cut(s) 196, 771
BmsI GCATC 3 cut(s) 1075, 1166, 1477
BmuI ACTGGG 2 cut(s) 196, 771
BpmI CTGGAG 2 cut(s) 155, 1502
Bpu1102I GCTNAGC 1 cut(s) 332
Bpu14I TTCGAA 1 cut(s) 1426
BpuMI CCSGG 2 cut(s) 624, 1337
BsaBI GATNNNNATC 1 cut(s) 886
BsaHI GRCGYC 1 cut(s) 916
BsaJI CCNNGG 4 cut(s) 533, 830, 1035, 1115
BsaWI WCCGGW 2 cut(s) 709, 1096
BsaXI ACNNNNNCTCC 4 cut(s) 142, 172, 242, 272
Bsc4I CCNNNNNNNGG 2 cut(s) 1063, 1386
Bse118I RCCGGY 3 cut(s) 567, 709, 1096
Bse1I ACTGG 6 cut(s) 11, 172, 202, 320, 777, 976
Bse8I GATNNNNATC 1 cut(s) 886
BseBI CCWGG 2 cut(s) 832, 920
BseDI CCNNGG 4 cut(s) 533, 830, 1035, 1115
BseGI GGATG 5 cut(s) 396, 887, 1090, 1157, 1492
BseJI GATNNNNATC 1 cut(s) 886
BseLI CCNNNNNNNGG 2 cut(s) 1063, 1386
BseMII CTCAG 1 cut(s) 346
BseNI ACTGG 6 cut(s) 11, 172, 202, 320, 777, 976
BseXI GCAGC 5 cut(s) 810, 897, 1138, 1141, 1317
Bsh1236I CGCG 3 cut(s) 90, 231, 1110
Bsh1285I CGRYCG 1 cut(s) 217
BshFI GGCC 3 cut(s) 611, 774, 844
BshNI GGYRCC 1 cut(s) 915
BshTI ACCGGT 2 cut(s) 709, 1096
BsiEI CGRYCG 1 cut(s) 217
BsiHKAI GWGCWC 2 cut(s) 1263, 1411
BsiHKCI CYCGRG 1 cut(s) 572
BsiSI CCGG 8 cut(s) 284, 461, 568, 624, 710, 948, 1097, 1336
BslFI GGGAC 4 cut(s) 851, 865, 1369, 1481
BslI CCNNNNNNNGG 2 cut(s) 1063, 1386
BsmAI GTCTC 2 cut(s) 19, 27
BsmFI GGGAC 4 cut(s) 851, 865, 1369, 1481
BsnI GGCC 3 cut(s) 611, 774, 844
BsoBI CYCGRG 1 cut(s) 572
Bsp119I TTCGAA 1 cut(s) 1426
Bsp1286I GDGCHC 2 cut(s) 1263, 1411
Bsp143I GATC 4 cut(s) 340, 592, 958, 1367
Bsp1720I GCTNAGC 1 cut(s) 332
Bsp19I CCATGG 1 cut(s) 1115
BspANI GGCC 3 cut(s) 611, 774, 844
BspCNI CTCAG 1 cut(s) 345
BspFNI CGCG 3 cut(s) 90, 231, 1110
BspLI GGNNCC 3 cut(s) 775, 795, 917
BspMAI CTGCAG 1 cut(s) 1456
BspPI GGATC 2 cut(s) 335, 953
BspQI GCTCTTC 1 cut(s) 1428
BspT104I TTCGAA 1 cut(s) 1426
BspT107I GGYRCC 1 cut(s) 915
BsrFI RCCGGY 3 cut(s) 567, 709, 1096
BsrI ACTGG 6 cut(s) 11, 172, 202, 320, 777, 976
BssAI RCCGGY 3 cut(s) 567, 709, 1096
BssECI CCNNGG 4 cut(s) 533, 830, 1035, 1115
BssMI GATC 4 cut(s) 340, 592, 958, 1367
BssNI GRCGYC 1 cut(s) 916
BssT1I CCWWGG 2 cut(s) 1035, 1115
Bst2UI CCWGG 2 cut(s) 832, 920
Bst4CI ACNGT 4 cut(s) 21, 856, 898, 1046
Bst6I CTCTTC 6 cut(s) 30, 35, 353, 777, 1423, 1428
BstACI GRCGYC 1 cut(s) 916
BstAPI GCANNNNNTGC 1 cut(s) 1460
BstBI TTCGAA 1 cut(s) 1426
BstC8I GCNNGC 3 cut(s) 229, 945, 1112
BstDEI CTNAG 3 cut(s) 332, 1005, 1309
BstDSI CCRYGG 2 cut(s) 533, 1115
BstF5I GGATG 5 cut(s) 396, 887, 1090, 1157, 1492
BstFNI CGCG 3 cut(s) 90, 231, 1110
BstH2I RGCGCY 1 cut(s) 919
BstHHI GCGC 5 cut(s) 92, 233, 918, 1110, 1305
BstKTI GATC 4 cut(s) 343, 595, 961, 1370
BstMAI GTCTC 2 cut(s) 19, 27
BstMBI GATC 4 cut(s) 340, 592, 958, 1367
BstMCI CGRYCG 1 cut(s) 217
BstMWI GCNNNNNNNGC 6 cut(s) 233, 289, 451, 802, 1120, 1460
BstNI CCWGG 2 cut(s) 832, 920
BstNSI RCATGY 1 cut(s) 947
BstSCI CCNGG 4 cut(s) 622, 830, 918, 1335
BstSFI CTRYAG 1 cut(s) 1452
BstUI CGCG 3 cut(s) 90, 231, 1110
BstV1I GCAGC 5 cut(s) 810, 897, 1138, 1141, 1317
BstX2I RGATCY 1 cut(s) 1367
BstYI RGATCY 1 cut(s) 1367
BsuI GTATCC 1 cut(s) 540
BsuRI GGCC 3 cut(s) 611, 774, 844
BtgI CCRYGG 2 cut(s) 533, 1115
BtsCI GGATG 5 cut(s) 396, 887, 1090, 1157, 1492
BtsIMutI CAGTG 4 cut(s) 17, 602, 784, 1051
Cac8I GCNNGC 3 cut(s) 229, 945, 1112
CfoI GCGC 5 cut(s) 92, 233, 918, 1110, 1305
Cfr10I RCCGGY 3 cut(s) 567, 709, 1096
Cfr13I GGNCC 3 cut(s) 322, 773, 842
Csp6I GTAC 6 cut(s) 175, 367, 394, 565, 583, 1184
CspAI ACCGGT 2 cut(s) 709, 1096
CviAII CATG 5 cut(s) 120, 662, 944, 1116, 1464
CviQI GTAC 6 cut(s) 175, 367, 394, 565, 583, 1184
DdeI CTNAG 3 cut(s) 332, 1005, 1309
DinI GGCGCC 1 cut(s) 917
DpnI GATC 4 cut(s) 342, 594, 960, 1369
DpnII GATC 4 cut(s) 340, 592, 958, 1367
Eam1104I CTCTTC 6 cut(s) 30, 35, 353, 777, 1423, 1428
EarI CTCTTC 6 cut(s) 30, 35, 353, 777, 1423, 1428
Ecl136II GAGCTC 1 cut(s) 1261
Eco130I CCWWGG 2 cut(s) 1035, 1115
Eco147I AGGCCT 1 cut(s) 611
Eco24I GRGCYC 1 cut(s) 1263
Eco32I GATATC 1 cut(s) 1278
Eco47I GGWCC 1 cut(s) 322
Eco53kI GAGCTC 1 cut(s) 1261
Eco57I CTGAAG 1 cut(s) 476
Eco88I CYCGRG 1 cut(s) 572
EcoICRI GAGCTC 1 cut(s) 1261
EcoO109I RGGNCCY 1 cut(s) 773
EcoRII CCWGG 2 cut(s) 830, 918
EcoRV GATATC 1 cut(s) 1278
EcoT14I CCWWGG 2 cut(s) 1035, 1115
EcoT22I ATGCAT 1 cut(s) 1465
EcoT38I GRGCYC 1 cut(s) 1263
EgeI GGCGCC 1 cut(s) 917
EheI GGCGCC 1 cut(s) 917
ErhI CCWWGG 2 cut(s) 1035, 1115
FaeI CATG 5 cut(s) 123, 665, 947, 1119, 1467
FaqI GGGAC 4 cut(s) 851, 865, 1369, 1481
FatI CATG 5 cut(s) 119, 661, 943, 1115, 1463
FauI CCCGC 6 cut(s) 62, 95, 107, 232, 236, 423
FbaI TGATCA 1 cut(s) 592
FokI GGATG 5 cut(s) 403, 894, 1097, 1144, 1499
FriOI GRGCYC 1 cut(s) 1263
FspBI CTAG 2 cut(s) 602, 1510
GlaI GCGC 5 cut(s) 91, 232, 917, 1109, 1304
GsuI CTGGAG 2 cut(s) 155, 1502
HaeII RGCGCY 1 cut(s) 919
HaeIII GGCC 3 cut(s) 611, 774, 844
HapII CCGG 8 cut(s) 284, 461, 568, 624, 710, 948, 1097, 1336
HhaI GCGC 5 cut(s) 92, 233, 918, 1110, 1305
Hin1I GRCGYC 1 cut(s) 916
Hin1II CATG 5 cut(s) 123, 665, 947, 1119, 1467
Hin6I GCGC 5 cut(s) 90, 231, 916, 1108, 1303
HinP1I GCGC 5 cut(s) 90, 231, 916, 1108, 1303
HinfI GANTC 6 cut(s) 269, 275, 404, 634, 1091, 1433
HpaII CCGG 8 cut(s) 284, 461, 568, 624, 710, 948, 1097, 1336
HphI GGTGA 7 cut(s) 59, 76, 712, 877, 1086, 1229, 1257
Hpy166II GTNNAC 3 cut(s) 565, 868, 1015
Hpy188I TCNGA 5 cut(s) 268, 274, 345, 409, 963
Hpy188III TCNNGA 5 cut(s) 242, 574, 590, 602, 617
Hpy8I GTNNAC 3 cut(s) 565, 868, 1015
Hpy99I CGWCG 2 cut(s) 142, 341
HpyAV CCTTC 8 cut(s) 44, 68, 230, 535, 691, 733, 928, 1228
HpyCH4III ACNGT 4 cut(s) 21, 856, 898, 1046
HpyCH4IV ACGT 2 cut(s) 521, 1502
HpyCH4V TGCA 5 cut(s) 487, 1157, 1454, 1463, 1490
HpyF10VI GCNNNNNNNGC 6 cut(s) 233, 289, 451, 802, 1120, 1460
HpyF3I CTNAG 3 cut(s) 332, 1005, 1309
HpySE526I ACGT 2 cut(s) 521, 1502
Hsp92I GRCGYC 1 cut(s) 916
Hsp92II CATG 5 cut(s) 123, 665, 947, 1119, 1467
HspAI GCGC 5 cut(s) 90, 231, 916, 1108, 1303
KasI GGCGCC 1 cut(s) 915
Ksp22I TGATCA 1 cut(s) 592
Kzo9I GATC 4 cut(s) 340, 592, 958, 1367
LguI GCTCTTC 1 cut(s) 1428
LmnI GCTCC 4 cut(s) 451, 502, 793, 1120
Lsp1109I GCAGC 5 cut(s) 810, 897, 1138, 1141, 1317
LweI GCATC 3 cut(s) 1075, 1166, 1477
MaeI CTAG 2 cut(s) 602, 1510
MaeII ACGT 2 cut(s) 521, 1502
MaeIII GTNAC 2 cut(s) 1040, 1339
MalI GATC 4 cut(s) 342, 594, 960, 1369
MboI GATC 4 cut(s) 340, 592, 958, 1367
MfeI CAATTG 1 cut(s) 1437
MflI RGATCY 1 cut(s) 1367
MhlI GDGCHC 2 cut(s) 1263, 1411
MluCI AATT 4 cut(s) 299, 981, 1437, 1491
Mly113I GGCGCC 1 cut(s) 916
MlyI GAGTC 1 cut(s) 263
MmeI TCCRAC 2 cut(s) 291, 1192
Mph1103I ATGCAT 1 cut(s) 1465
MroXI GAANNNNTTC 1 cut(s) 1432
MseI TTAA 3 cut(s) 729, 980, 1415
MspI CCGG 8 cut(s) 284, 461, 568, 624, 710, 948, 1097, 1336
MspR9I CCNGG 4 cut(s) 624, 832, 920, 1337
MunI CAATTG 1 cut(s) 1437
MvaI CCWGG 2 cut(s) 832, 920
MvnI CGCG 3 cut(s) 90, 231, 1110
MwoI GCNNNNNNNGC 6 cut(s) 233, 289, 451, 802, 1120, 1460
NarI GGCGCC 1 cut(s) 916
NciI CCSGG 2 cut(s) 624, 1337
NcoI CCATGG 1 cut(s) 1115
NdeII GATC 4 cut(s) 340, 592, 958, 1367
NlaIII CATG 5 cut(s) 123, 665, 947, 1119, 1467
NlaIV GGNNCC 3 cut(s) 775, 795, 917
NmeAIII GCCGAG 1 cut(s) 1377
NsiI ATGCAT 1 cut(s) 1465
NspI RCATGY 1 cut(s) 947
NspV TTCGAA 1 cut(s) 1426
PaeI GCATGC 1 cut(s) 947
PaeR7I CTCGAG 1 cut(s) 572
PceI AGGCCT 1 cut(s) 611
PciSI GCTCTTC 1 cut(s) 1428
PcsI WCGNNNNNNNCGW 2 cut(s) 624, 959
PdmI GAANNNNTTC 1 cut(s) 1432
PfeI GAWTC 5 cut(s) 275, 404, 634, 1091, 1433
PinAI ACCGGT 2 cut(s) 709, 1096
PleI GAGTC 1 cut(s) 263
PluTI GGCGCC 1 cut(s) 919
PpsI GAGTC 1 cut(s) 263
Psp124BI GAGCTC 1 cut(s) 1263
Psp6I CCWGG 2 cut(s) 830, 918
PspGI CCWGG 2 cut(s) 830, 918
PspN4I GGNNCC 3 cut(s) 775, 795, 917
PspPI GGNCC 3 cut(s) 322, 773, 842
PstI CTGCAG 1 cut(s) 1456
PsuI RGATCY 1 cut(s) 1367
RsaI GTAC 6 cut(s) 176, 368, 395, 566, 584, 1185
RsaNI GTAC 6 cut(s) 175, 367, 394, 565, 583, 1184
SacI GAGCTC 1 cut(s) 1263
SapI GCTCTTC 1 cut(s) 1428
SaqAI TTAA 3 cut(s) 729, 980, 1415
Sau3AI GATC 4 cut(s) 340, 592, 958, 1367
Sau96I GGNCC 3 cut(s) 322, 773, 842
ScaI AGTACT 2 cut(s) 368, 584
SchI GAGTC 1 cut(s) 263
ScrFI CCNGG 4 cut(s) 624, 832, 920, 1337
SduI GDGCHC 2 cut(s) 1263, 1411
SfaNI GCATC 3 cut(s) 1075, 1166, 1477
SfcI CTRYAG 1 cut(s) 1452
SfoI GGCGCC 1 cut(s) 917
Sfr274I CTCGAG 1 cut(s) 572
SfuI TTCGAA 1 cut(s) 1426
SinI GGWCC 1 cut(s) 322
SlaI CTCGAG 1 cut(s) 572
SmlI CTYRAG 1 cut(s) 572
SmoI CTYRAG 1 cut(s) 572
SphI GCATGC 1 cut(s) 947
Sse9I AATT 4 cut(s) 299, 981, 1437, 1491
SseBI AGGCCT 1 cut(s) 611
SspDI GGCGCC 1 cut(s) 915
SspI AATATT 1 cut(s) 1448
SspMI CTAG 2 cut(s) 602, 1510
SstI GAGCTC 1 cut(s) 1263
StuI AGGCCT 1 cut(s) 611
StyD4I CCNGG 4 cut(s) 622, 830, 918, 1335
StyI CCWWGG 2 cut(s) 1035, 1115
TaaI ACNGT 4 cut(s) 21, 856, 898, 1046
TaiI ACGT 2 cut(s) 524, 1505
TaqI TCGA 7 cut(s) 213, 309, 356, 573, 618, 1076, 1426
TasI AATT 4 cut(s) 299, 981, 1437, 1491
TatI WGTACW 2 cut(s) 366, 582
TauI GCSGC 6 cut(s) 126, 236, 402, 430, 719, 916
TfiI GAWTC 5 cut(s) 275, 404, 634, 1091, 1433
Tru1I TTAA 3 cut(s) 729, 980, 1415
Tru9I TTAA 3 cut(s) 729, 980, 1415
TscAI CASTG 4 cut(s) 24, 602, 784, 1051
TseI GCWGC 5 cut(s) 823, 910, 1151, 1154, 1305
TspDTI ATGAA 1 cut(s) 1149
TspGWI ACGGA 3 cut(s) 522, 1046, 1288
TspRI CASTG 4 cut(s) 24, 602, 784, 1051
VpaK11BI GGWCC 1 cut(s) 322
XbaI TCTAGA 1 cut(s) 601
XceI RCATGY 1 cut(s) 947
XhoI CTCGAG 1 cut(s) 572
XmnI GAANNNNTTC 1 cut(s) 1432
XspI CTAG 2 cut(s) 602, 1510
ZrmI AGTACT 2 cut(s) 368, 584
Zsp2I ATGCAT 1 cut(s) 1465
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.