Light-mediated development protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Det1 | PF09737 | 122 - 473 | 1.9e-129 | De-etiolated protein 1 Det1 |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 738, 942 |
| Acc36I | ACCTGC | 2 cut(s) | 738, 942 |
| AccB1I | GGYRCC | 2 cut(s) | 578, 927 |
| AccIII | TCCGGA | 1 cut(s) | 153 |
| AciI | CCGC | 5 cut(s) | 40, 88, 394, 784, 1004 |
| AclWI | GGATC | 3 cut(s) | 537, 824, 837 |
| AcsI | RAATTY | 7 cut(s) | 100, 112, 158, 1048, 1114, 1129, 1365 |
| AcuI | CTGAAG | 1 cut(s) | 875 |
| AfaI | GTAC | 4 cut(s) | 108, 179, 525, 912 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 62, 291, 449, 508, 574 |
| AflII | CTTAAG | 1 cut(s) | 1340 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 693 |
| AjnI | CCWGG | 2 cut(s) | 230, 290 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 134, 166 |
| AluBI | AGCT | 7 cut(s) | 306, 319, 355, 712, 1037, 1063, 1232 |
| AluI | AGCT | 7 cut(s) | 306, 319, 355, 712, 1037, 1063, 1232 |
| Alw26I | GTCTC | 5 cut(s) | 249, 334, 476, 645, 1013 |
| AlwI | GGATC | 3 cut(s) | 537, 824, 837 |
| Ama87I | CYCGRG | 1 cut(s) | 1164 |
| Aor13HI | TCCGGA | 1 cut(s) | 153 |
| AoxI | GGCC | 2 cut(s) | 772, 850 |
| ApeKI | GCWGC | 1 cut(s) | 68 |
| ApoI | RAATTY | 7 cut(s) | 100, 112, 158, 1048, 1114, 1129, 1365 |
| AseI | ATTAAT | 1 cut(s) | 741 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 863 |
| AspLEI | GCGC | 3 cut(s) | 68, 263, 458 |
| AspS9I | GGNCC | 4 cut(s) | 142, 537, 844, 922 |
| AsuC2I | CCSGG | 2 cut(s) | 63, 140 |
| AsuHPI | GGTGA | 5 cut(s) | 16, 154, 481, 488, 536 |
| AsuNHI | GCTAGC | 1 cut(s) | 1228 |
| AvaI | CYCGRG | 1 cut(s) | 1164 |
| AvaII | GGWCC | 4 cut(s) | 142, 537, 844, 922 |
| BamHI | GGATCC | 1 cut(s) | 829 |
| BanI | GGYRCC | 2 cut(s) | 578, 927 |
| BbvI | GCAGC | 1 cut(s) | 55 |
| BccI | CCATC | 4 cut(s) | 153, 481, 494, 509 |
| BciT130I | CCWGG | 2 cut(s) | 232, 292 |
| BclI | TGATCA | 2 cut(s) | 1090, 1279 |
| BcnI | CCSGG | 2 cut(s) | 63, 140 |
| BcoDI | GTCTC | 5 cut(s) | 249, 334, 476, 645, 1013 |
| BfaI | CTAG | 4 cut(s) | 84, 264, 342, 1229 |
| BfmI | CTRYAG | 2 cut(s) | 322, 731 |
| BfoI | RGCGCY | 2 cut(s) | 69, 459 |
| BfrI | CTTAAG | 1 cut(s) | 1340 |
| BfuAI | ACCTGC | 2 cut(s) | 738, 942 |
| BisI | GCNGC | 1 cut(s) | 69 |
| BlsI | GCNGC | 1 cut(s) | 70 |
| Bme1390I | CCNGG | 4 cut(s) | 63, 140, 232, 292 |
| Bme18I | GGWCC | 4 cut(s) | 142, 537, 844, 922 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 693 |
| BmeT110I | CYCGRG | 1 cut(s) | 1164 |
| BmgT120I | GGNCC | 4 cut(s) | 142, 537, 844, 922 |
| BmiI | GGNNCC | 4 cut(s) | 580, 831, 845, 929 |
| BmrFI | CCNGG | 4 cut(s) | 63, 140, 232, 292 |
| BmsI | GCATC | 1 cut(s) | 1215 |
| BmtI | GCTAGC | 1 cut(s) | 1232 |
| BoxI | GACNNNNGTC | 1 cut(s) | 171 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1252, 1284 |
| BpuMI | CCSGG | 2 cut(s) | 63, 140 |
| BsaAI | YACGTR | 1 cut(s) | 974 |
| BsaI | GGTCTC | 1 cut(s) | 476 |
| BsaJI | CCNNGG | 1 cut(s) | 847 |
| BsaWI | WCCGGW | 1 cut(s) | 153 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 62, 291, 449, 508, 574 |
| Bse118I | RCCGGY | 1 cut(s) | 924 |
| Bse1I | ACTGG | 1 cut(s) | 531 |
| BseAI | TCCGGA | 1 cut(s) | 153 |
| BseBI | CCWGG | 2 cut(s) | 232, 292 |
| BseDI | CCNNGG | 1 cut(s) | 847 |
| BseGI | GGATG | 1 cut(s) | 1322 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 62, 291, 449, 508, 574 |
| BseMII | CTCAG | 4 cut(s) | 437, 478, 494, 1166 |
| BseNI | ACTGG | 1 cut(s) | 531 |
| BseRI | GAGGAG | 3 cut(s) | 45, 48, 465 |
| BseXI | GCAGC | 1 cut(s) | 55 |
| BseYI | CCCAGC | 1 cut(s) | 991 |
| Bsh1285I | CGRYCG | 1 cut(s) | 40 |
| BshFI | GGCC | 2 cut(s) | 774, 852 |
| BshNI | GGYRCC | 2 cut(s) | 578, 927 |
| BsiEI | CGRYCG | 1 cut(s) | 40 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1164 |
| BsiSI | CCGG | 5 cut(s) | 63, 140, 154, 657, 925 |
| BslFI | GGGAC | 3 cut(s) | 455, 598, 700 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 62, 291, 449, 508, 574 |
| BsmAI | GTCTC | 5 cut(s) | 249, 334, 476, 645, 1013 |
| BsmBI | CGTCTC | 1 cut(s) | 1013 |
| BsmFI | GGGAC | 3 cut(s) | 455, 598, 700 |
| BsnI | GGCC | 2 cut(s) | 774, 852 |
| Bso31I | GGTCTC | 1 cut(s) | 476 |
| BsoBI | CYCGRG | 1 cut(s) | 1164 |
| Bsp13I | TCCGGA | 1 cut(s) | 153 |
| Bsp143I | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| BspACI | CCGC | 5 cut(s) | 40, 88, 394, 784, 1004 |
| BspANI | GGCC | 2 cut(s) | 774, 852 |
| BspCNI | CTCAG | 4 cut(s) | 436, 477, 495, 1167 |
| BspEI | TCCGGA | 1 cut(s) | 153 |
| BspLI | GGNNCC | 4 cut(s) | 580, 831, 845, 929 |
| BspMAI | CTGCAG | 1 cut(s) | 735 |
| BspMI | ACCTGC | 2 cut(s) | 738, 942 |
| BspOI | GCTAGC | 1 cut(s) | 1232 |
| BspPI | GGATC | 3 cut(s) | 537, 824, 837 |
| BspT107I | GGYRCC | 2 cut(s) | 578, 927 |
| BspTI | CTTAAG | 1 cut(s) | 1340 |
| BspTNI | GGTCTC | 1 cut(s) | 476 |
| BsrFI | RCCGGY | 1 cut(s) | 924 |
| BsrI | ACTGG | 1 cut(s) | 531 |
| BssAI | RCCGGY | 1 cut(s) | 924 |
| BssECI | CCNNGG | 1 cut(s) | 847 |
| BssMI | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| BssT1I | CCWWGG | 1 cut(s) | 847 |
| Bst2UI | CCWGG | 2 cut(s) | 232, 292 |
| Bst4CI | ACNGT | 3 cut(s) | 173, 326, 754 |
| BstAFI | CTTAAG | 1 cut(s) | 1340 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 934 |
| BstBAI | YACGTR | 1 cut(s) | 974 |
| BstC8I | GCNNGC | 4 cut(s) | 603, 678, 1161, 1230 |
| BstDEI | CTNAG | 4 cut(s) | 423, 464, 503, 1175 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 447 |
| BstF5I | GGATG | 1 cut(s) | 1322 |
| BstH2I | RGCGCY | 2 cut(s) | 69, 459 |
| BstHHI | GCGC | 3 cut(s) | 68, 263, 458 |
| BstKTI | GATC | 7 cut(s) | 277, 532, 832, 985, 1093, 1282, 1322 |
| BstMAI | GTCTC | 5 cut(s) | 249, 334, 476, 645, 1013 |
| BstMBI | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| BstMCI | CGRYCG | 1 cut(s) | 40 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 934, 1001 |
| BstNI | CCWGG | 2 cut(s) | 232, 292 |
| BstNSI | RCATGY | 2 cut(s) | 1159, 1163 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 171 |
| BstSCI | CCNGG | 4 cut(s) | 61, 138, 230, 290 |
| BstSFI | CTRYAG | 2 cut(s) | 322, 731 |
| BstV1I | GCAGC | 1 cut(s) | 55 |
| BstX2I | RGATCY | 1 cut(s) | 829 |
| BstYI | RGATCY | 1 cut(s) | 829 |
| BsuRI | GGCC | 2 cut(s) | 774, 852 |
| BtsCI | GGATG | 1 cut(s) | 1322 |
| BtsI | GCAGTG | 1 cut(s) | 417 |
| BtsIMutI | CAGTG | 3 cut(s) | 331, 417, 472 |
| BveI | ACCTGC | 2 cut(s) | 738, 942 |
| Cac8I | GCNNGC | 4 cut(s) | 603, 678, 1161, 1230 |
| CfoI | GCGC | 3 cut(s) | 68, 263, 458 |
| Cfr10I | RCCGGY | 1 cut(s) | 924 |
| Cfr13I | GGNCC | 4 cut(s) | 142, 537, 844, 922 |
| Csp6I | GTAC | 4 cut(s) | 107, 178, 524, 911 |
| CviAII | CATG | 5 cut(s) | 382, 548, 1015, 1156, 1160 |
| CviQI | GTAC | 4 cut(s) | 107, 178, 524, 911 |
| DdeI | CTNAG | 4 cut(s) | 423, 464, 503, 1175 |
| DpnI | GATC | 7 cut(s) | 276, 531, 831, 984, 1092, 1281, 1321 |
| DpnII | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| DraI | TTTAAA | 1 cut(s) | 313 |
| DriI | GACNNNNNGTC | 1 cut(s) | 693 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 693 |
| Eco130I | CCWWGG | 1 cut(s) | 847 |
| Eco147I | AGGCCT | 1 cut(s) | 852 |
| Eco31I | GGTCTC | 1 cut(s) | 476 |
| Eco47I | GGWCC | 4 cut(s) | 142, 537, 844, 922 |
| Eco57I | CTGAAG | 1 cut(s) | 875 |
| Eco88I | CYCGRG | 1 cut(s) | 1164 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 447 |
| EcoO109I | RGGNCCY | 1 cut(s) | 537 |
| EcoRI | GAATTC | 1 cut(s) | 1048 |
| EcoRII | CCWGG | 2 cut(s) | 230, 290 |
| EcoT14I | CCWWGG | 1 cut(s) | 847 |
| EcoT22I | ATGCAT | 1 cut(s) | 1161 |
| ErhI | CCWWGG | 1 cut(s) | 847 |
| Esp3I | CGTCTC | 1 cut(s) | 1013 |
| FaeI | CATG | 5 cut(s) | 385, 551, 1018, 1159, 1163 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 356, 388, 1189, 1221, 1323, 1355 |
| FaqI | GGGAC | 3 cut(s) | 455, 598, 700 |
| FatI | CATG | 5 cut(s) | 381, 547, 1014, 1155, 1159 |
| FauNDI | CATATG | 1 cut(s) | 185 |
| FbaI | TGATCA | 2 cut(s) | 1090, 1279 |
| Fnu4HI | GCNGC | 1 cut(s) | 69 |
| FokI | GGATG | 1 cut(s) | 1309 |
| Fsp4HI | GCNGC | 1 cut(s) | 69 |
| FspBI | CTAG | 4 cut(s) | 84, 264, 342, 1229 |
| GlaI | GCGC | 3 cut(s) | 67, 262, 457 |
| GluI | GCNGC | 1 cut(s) | 69 |
| GsaI | CCCAGC | 1 cut(s) | 995 |
| HaeII | RGCGCY | 2 cut(s) | 69, 459 |
| HaeIII | GGCC | 2 cut(s) | 774, 852 |
| HapII | CCGG | 5 cut(s) | 63, 140, 154, 657, 925 |
| HhaI | GCGC | 3 cut(s) | 68, 263, 458 |
| Hin1II | CATG | 5 cut(s) | 385, 551, 1018, 1159, 1163 |
| Hin6I | GCGC | 3 cut(s) | 66, 261, 456 |
| HinP1I | GCGC | 3 cut(s) | 66, 261, 456 |
| HincII | GTYRAC | 2 cut(s) | 892, 1315 |
| HindII | GTYRAC | 2 cut(s) | 892, 1315 |
| HinfI | GANTC | 4 cut(s) | 30, 427, 653, 1261 |
| HpaII | CCGG | 5 cut(s) | 63, 140, 154, 657, 925 |
| HphI | GGTGA | 5 cut(s) | 16, 154, 481, 488, 536 |
| Hpy166II | GTNNAC | 4 cut(s) | 76, 220, 892, 1315 |
| Hpy188I | TCNGA | 7 cut(s) | 8, 207, 426, 534, 650, 834, 1047 |
| Hpy188III | TCNNGA | 8 cut(s) | 154, 301, 431, 502, 698, 904, 1110, 1166 |
| Hpy8I | GTNNAC | 4 cut(s) | 76, 220, 892, 1315 |
| Hpy99I | CGWCG | 3 cut(s) | 170, 173, 1027 |
| HpyAV | CCTTC | 6 cut(s) | 348, 626, 901, 1251, 1275, 1339 |
| HpyCH4III | ACNGT | 3 cut(s) | 173, 326, 754 |
| HpyCH4IV | ACGT | 1 cut(s) | 973 |
| HpyCH4V | TGCA | 6 cut(s) | 249, 363, 643, 733, 1159, 1210 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 934, 1001 |
| HpyF3I | CTNAG | 4 cut(s) | 423, 464, 503, 1175 |
| HpySE526I | ACGT | 1 cut(s) | 973 |
| Hsp92II | CATG | 5 cut(s) | 385, 551, 1018, 1159, 1163 |
| HspAI | GCGC | 3 cut(s) | 66, 261, 456 |
| Kpn2I | TCCGGA | 1 cut(s) | 153 |
| Ksp22I | TGATCA | 2 cut(s) | 1090, 1279 |
| Kzo9I | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| LmnI | GCTCC | 1 cut(s) | 1168 |
| Lsp1109I | GCAGC | 1 cut(s) | 55 |
| LweI | GCATC | 1 cut(s) | 1215 |
| MaeI | CTAG | 4 cut(s) | 84, 264, 342, 1229 |
| MaeII | ACGT | 1 cut(s) | 973 |
| MaeIII | GTNAC | 2 cut(s) | 22, 389 |
| MalI | GATC | 7 cut(s) | 276, 531, 831, 984, 1092, 1281, 1321 |
| MboI | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| MboII | GAAGA | 9 cut(s) | 25, 269, 524, 713, 833, 868, 871, 1231, 1234 |
| MfeI | CAATTG | 1 cut(s) | 681 |
| MflI | RGATCY | 1 cut(s) | 829 |
| MlyI | GAGTC | 3 cut(s) | 436, 647, 1270 |
| MmeI | TCCRAC | 2 cut(s) | 427, 857 |
| Mph1103I | ATGCAT | 1 cut(s) | 1161 |
| MroI | TCCGGA | 1 cut(s) | 153 |
| MroXI | GAANNNNTTC | 1 cut(s) | 863 |
| MseI | TTAA | 4 cut(s) | 312, 741, 1341, 1369 |
| MspA1I | CMGCKG | 1 cut(s) | 784 |
| MspCI | CTTAAG | 1 cut(s) | 1340 |
| MspI | CCGG | 5 cut(s) | 63, 140, 154, 657, 925 |
| MspR9I | CCNGG | 4 cut(s) | 63, 140, 232, 292 |
| MunI | CAATTG | 1 cut(s) | 681 |
| MvaI | CCWGG | 2 cut(s) | 232, 292 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 934, 1001 |
| NciI | CCSGG | 2 cut(s) | 63, 140 |
| NdeI | CATATG | 1 cut(s) | 185 |
| NdeII | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| NheI | GCTAGC | 1 cut(s) | 1228 |
| NlaIII | CATG | 5 cut(s) | 385, 551, 1018, 1159, 1163 |
| NlaIV | GGNNCC | 4 cut(s) | 580, 831, 845, 929 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| NsiI | ATGCAT | 1 cut(s) | 1161 |
| NspI | RCATGY | 2 cut(s) | 1159, 1163 |
| PaeI | GCATGC | 1 cut(s) | 1163 |
| PaqCI | CACCTGC | 2 cut(s) | 738, 942 |
| PceI | AGGCCT | 1 cut(s) | 852 |
| PdmI | GAANNNNTTC | 1 cut(s) | 863 |
| PfeI | GAWTC | 1 cut(s) | 30 |
| PkrI | GCNGC | 1 cut(s) | 70 |
| PleI | GAGTC | 3 cut(s) | 435, 647, 1269 |
| PpsI | GAGTC | 3 cut(s) | 435, 647, 1269 |
| Ppu21I | YACGTR | 1 cut(s) | 974 |
| PpuMI | RGGWCCY | 1 cut(s) | 537 |
| PshAI | GACNNNNGTC | 1 cut(s) | 171 |
| PshBI | ATTAAT | 1 cut(s) | 741 |
| Psp5II | RGGWCCY | 1 cut(s) | 537 |
| Psp6I | CCWGG | 2 cut(s) | 230, 290 |
| PspFI | CCCAGC | 1 cut(s) | 991 |
| PspGI | CCWGG | 2 cut(s) | 230, 290 |
| PspN4I | GGNNCC | 4 cut(s) | 580, 831, 845, 929 |
| PspPI | GGNCC | 4 cut(s) | 142, 537, 844, 922 |
| PspPPI | RGGWCCY | 1 cut(s) | 537 |
| PstI | CTGCAG | 1 cut(s) | 735 |
| PsuI | RGATCY | 1 cut(s) | 829 |
| RsaI | GTAC | 4 cut(s) | 108, 179, 525, 912 |
| RsaNI | GTAC | 4 cut(s) | 107, 178, 524, 911 |
| SaqAI | TTAA | 4 cut(s) | 312, 741, 1341, 1369 |
| SatI | GCNGC | 1 cut(s) | 69 |
| Sau3AI | GATC | 7 cut(s) | 274, 529, 829, 982, 1090, 1279, 1319 |
| Sau96I | GGNCC | 4 cut(s) | 142, 537, 844, 922 |
| SchI | GAGTC | 3 cut(s) | 436, 647, 1270 |
| ScrFI | CCNGG | 4 cut(s) | 63, 140, 232, 292 |
| SfaNI | GCATC | 1 cut(s) | 1215 |
| SfcI | CTRYAG | 2 cut(s) | 322, 731 |
| SinI | GGWCC | 4 cut(s) | 142, 537, 844, 922 |
| SmlI | CTYRAG | 1 cut(s) | 1340 |
| SmoI | CTYRAG | 1 cut(s) | 1340 |
| SphI | GCATGC | 1 cut(s) | 1163 |
| SseBI | AGGCCT | 1 cut(s) | 852 |
| SsiI | CCGC | 5 cut(s) | 40, 88, 394, 784, 1004 |
| SspI | AATATT | 1 cut(s) | 739 |
| SspMI | CTAG | 4 cut(s) | 84, 264, 342, 1229 |
| StuI | AGGCCT | 1 cut(s) | 852 |
| StyD4I | CCNGG | 4 cut(s) | 61, 138, 230, 290 |
| StyI | CCWWGG | 1 cut(s) | 847 |
| TaaI | ACNGT | 3 cut(s) | 173, 326, 754 |
| TaiI | ACGT | 1 cut(s) | 976 |
| TaqI | TCGA | 4 cut(s) | 36, 300, 1109, 1294 |
| TatI | WGTACW | 1 cut(s) | 523 |
| TfiI | GAWTC | 1 cut(s) | 30 |
| Tru1I | TTAA | 4 cut(s) | 312, 741, 1341, 1369 |
| Tru9I | TTAA | 4 cut(s) | 312, 741, 1341, 1369 |
| TscAI | CASTG | 3 cut(s) | 331, 424, 472 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| TseI | GCWGC | 1 cut(s) | 68 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 9 cut(s) | 141, 755, 759, 787, 834, 1107, 1142, 1317, 1325 |
| TspGWI | ACGGA | 2 cut(s) | 842, 1040 |
| TspRI | CASTG | 3 cut(s) | 331, 424, 472 |
| Vha464I | CTTAAG | 1 cut(s) | 1340 |
| VpaK11BI | GGWCC | 4 cut(s) | 142, 537, 844, 922 |
| VspI | ATTAAT | 1 cut(s) | 741 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 447 |
| XapI | RAATTY | 7 cut(s) | 100, 112, 158, 1048, 1114, 1129, 1365 |
| XceI | RCATGY | 2 cut(s) | 1159, 1163 |
| XmnI | GAANNNNTTC | 1 cut(s) | 863 |
| XspI | CTAG | 4 cut(s) | 84, 264, 342, 1229 |
| Zsp2I | ATGCAT | 1 cut(s) | 1161 |