Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0000973

Physical Location & Seq

Genomic Coordinates Forward (+)

13259480 .. 13261804

Gene Structure 2325 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0081800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1929 bp

ATGATCACAGGAAGGCTACCCATGCCAGCACGACTAGTACTCCTTCTACTTCTTGGTTTGTGCAGTGTCGCTTGCCACGCTAATGATGATCCTCATCACTGTGAACCTTCTTCCTGCGGCCACATCCGAAATATAAGTTACCCTTTCCGACTCAATGATGATCCAAAGAAGTGCGGTAAATCAAGGTATACCCTGTCTTGTGAGAACAATGTCACTGTATTACACTTGTATTCAGGAAAATACTATGTGCTTGCCATCAATTATGGAAACGCCACAATCCGAGTTGTGGATGCCAATGTTCGGAAGGGTAACTGCTCTTCAATCCCTCGTAATTCGTTGGCCAGCTATAACTTCAGTGATGAGGATCCATACGACATTCATATGTTGAAAGGTCACGATTATTGGGGGCACACGACGACGTTGGAACTGTCAAAGCCTATAATCTTCATGACCTGTGAAACTCGGCCGGTGAATTCGTATCTCTATATGGATACTGCTCCTTGCATTAATGCAACGAGTGGGCATTCTTTTGTTATCACTGGAGGCTTAAATGCCTCGGATTTGTGGGATTCATGTCGCATAGAGCTGATGGTCTTGACATCATCGTCGATTGGTACAAAGGACGTGAACAGTTCCTATATTGACATCCACAATGAGCTGCTCTATGGTTTTGAACTTTCATGGTTGCGAAGCTACAGTCGACCAAAGAGTTGCTATGTCGACACTGCTACCAACAAAGCACCAGTTTCATTCGCTGTATCTACAATGGCAGTACTTTCGTGGATTGTGGCAAAACCTGTATTCGGAATTCCATGTGTGGTTGTGTTTTTAATCTTGAAGTTGAAAAGACGACATATATCAATGTACAGCGTCATTGAAGAATTCTTACAGAGTCACAACAACCTCATGCCTATACGGTACTCCTACTCCAACATCAAGAAGATGACCAAAGGATTTAAGGATAAATTGGGGGAAGGAGGTTATGGCTCTGTGTACAAAGGAAAGCTTCGGAGCGGTCACCTTGTTGCTGTTAAGATGTTGGGAAATTCCAAAGCTAACGGGCAAGATTTTATGAATGAAGTTGGTACCATTGGAAGAATTCATCATGTAAATGTGGTGCGACTAATTGGCTATTGTGCTGAGGGATCAAAGCGTGCTCTTATATATGAGTACATGTCAAAAGGGTCTCTTGATAAACACATATTTCCTAAGGAAGGACTCATCTCCTTAAGTTGCAAGGAAGCATTTGAAATTTCCCTAGGAGTGGCCCGTGGTATTGATTATCTGCATCAAGGATGTGATATGAAAATTTTGCATTTCGATATCAAGCCACACAACATTCTTCTTGATGATAACTTTGTTCCAAAGATTTCTGACTTTGGGCTAGCAAGATTATGTCCTTTAGACGATAGTAGTTTAACTATGACTGCTGCAAGAGGAACCCTTGGATACATGGCTCCAGAACTGTTTTACAAAAATATAGGAGGTGTCTCGAACAAAGCTGACATCTATAGTTTTGGAAAGTTGCTGATGGAAATTGCAGGGAAAAGAAGGAATTTAAATGCACTTGCAGCAAATACGAGCCAAATTTACTTTCCTTCTTGGGTGTATGACCAGTTCAATGAAGAAAAGGAGGTGGAAATTGAAGATGCCACGGATGAGGAAAAGAAACTAACAAAGAAAATGCTCATGGTAGCATTGTGGTGTATACAAATGAAGCCCAGTGACCGTCCTAATTCGATGAACAAAGTAGTAGAGATGCTTGAAGGAGAAGTTGAATTCATTCAAATGCCTCCAAAGCCTTTACTGTATCCACAAGACACGCCAGTAGTGGATGATGAAGATGATTCGGAAACAACTTTGTCATCATCACTGCCATTGAAAAATGAAGCTCAAGAGTCAATTAGTTCGATTCAAAATCCAAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

Det1

Protein Analysis

642

Amino Acids

71.89

Weight (kDa)

6.83

Isoelectric Point (pI)

46.53

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GUB_WAK_bind	PF13947	34 - 97	3.2e-19	Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr	PF07714	319 - 586	1.5e-42	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	320 - 581	3.7e-45	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10180
fragaria_vesca	FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420
malus_domestica	MD02G1269900.v1.1
prunus_persica	Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1
pyrus_communis	pycom02g23100 pycom02g23110
rosa_chinensis	RchiOBHm_Chr1g0329651
rosa_laevigata	RLG00000029875
rosa_multiflora	Rmu_sc0004805.1_g000003 Rmu_sc0016170.1_g000019
rosa_roxburghii	Rroxscaffold_4G00320810
rosa_rugosa	Rorug01G0081800
rosa_samantha	Rh1AG100200 Rh1BG079500 Rh1CG095800 Rh1DG102300
rosa_wichuraiana	Rw1G007790 Rw1G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	604
Acc65I	GGTACC	1 cut(s)	1085
AccB1I	GGYRCC	1 cut(s)	1085
AccBSI	CCGCTC	1 cut(s)	1014
AccI	GTMKAC	4 cut(s)	188, 700, 720, 1708
AciI	CCGC	3 cut(s)	117, 174, 1014
AclWI	GGATC	5 cut(s)	83, 155, 359, 372, 1153
AcoI	YGGCCR	3 cut(s)	118, 339, 464
AcuI	CTGAAG	1 cut(s)	337
AfaI	GTAC	8 cut(s)	39, 616, 774, 866, 920, 995, 1087, 1172
AfiI	CCNNNNNNNGG	5 cut(s)	286, 300, 803, 1214, 1264
AflII	CTTAAG	1 cut(s)	1228
AflIII	ACRYGT	1 cut(s)	1173
AhlI	ACTAGT	1 cut(s)	34
AjiI	CACGTC	1 cut(s)	625
AjuI	GAANNNNNNNTTGG	2 cut(s)	1578, 1610
AluBI	AGCT	8 cut(s)	345, 586, 658, 693, 1006, 1055, 1502, 1892
AluI	AGCT	8 cut(s)	345, 586, 658, 693, 1006, 1055, 1502, 1892
Alw21I	GWGCWC	1 cut(s)	1159
Alw26I	GTCTC	2 cut(s)	1191, 1495
AlwI	GGATC	5 cut(s)	83, 155, 359, 372, 1153
AoxI	GGCC	4 cut(s)	118, 339, 464, 1266
ApeKI	GCWGC	3 cut(s)	658, 1430, 1571
ArsI	GACNNNNNNTTYG	2 cut(s)	682, 714
AseI	ATTAAT	1 cut(s)	507
Asp700I	GAANNNNTTC	1 cut(s)	1782
Asp718I	GGTACC	1 cut(s)	1085
AspA2I	CCTAGG	1 cut(s)	1258
AspS9I	GGNCC	1 cut(s)	1267
AsuHPI	GGTGA	2 cut(s)	481, 1010
AsuNHI	GCTAGC	1 cut(s)	1384
AvrII	CCTAGG	1 cut(s)	1258
AxyI	CCTNAGG	1 cut(s)	1209
BaeGI	GKGCMC	1 cut(s)	411
BalI	TGGCCA	1 cut(s)	341
BamHI	GGATCC	1 cut(s)	364
BanI	GGYRCC	1 cut(s)	1085
BarI	GAAGNNNNNNTAC	4 cut(s)	301, 333, 870, 902
Bbv12I	GWGCWC	1 cut(s)	1159
BbvCI	CCTCAGC	1 cut(s)	1140
BbvI	GCAGC	3 cut(s)	645, 1417, 1583
BccI	CCATC	3 cut(s)	263, 583, 1525
BcgI	CGANNNNNNTGC	2 cut(s)	759, 793
BciVI	GTATCC	3 cut(s)	484, 1442, 1821
BclI	TGATCA	1 cut(s)	3
BcoDI	GTCTC	2 cut(s)	1191, 1495
BcuI	ACTAGT	1 cut(s)	34
BfaI	CTAG	3 cut(s)	35, 1259, 1385
BfmI	CTRYAG	2 cut(s)	694, 1510
BfrI	CTTAAG	1 cut(s)	1228
BfuI	GTATCC	3 cut(s)	484, 1442, 1821
BisI	GCNGC	4 cut(s)	118, 659, 1431, 1572
BlnI	CCTAGG	1 cut(s)	1258
BlsI	GCNGC	4 cut(s)	119, 660, 1432, 1573
BmcAI	AGTACT	2 cut(s)	39, 774
BmgBI	CACGTC	1 cut(s)	625
BmgT120I	GGNCC	1 cut(s)	1267
BmiI	GGNNCC	4 cut(s)	366, 1087, 1441, 1458
BmrI	ACTGGG	1 cut(s)	1716
BmsI	GCATC	4 cut(s)	280, 1297, 1639, 1749
BmtI	GCTAGC	1 cut(s)	1388
BmuI	ACTGGG	1 cut(s)	1716
BpmI	CTGGAG	2 cut(s)	561, 1443
Bpu10I	CCTNAGC	1 cut(s)	1140
BpuEI	CTTGAG	1 cut(s)	1878
BsaBI	GATNNNNATC	2 cut(s)	93, 363
BsaI	GGTCTC	1 cut(s)	1191
BsaJI	CCNNGG	5 cut(s)	555, 1258, 1270, 1444, 1653
BsaXI	ACNNNNNCTCC	4 cut(s)	24, 54, 911, 941
Bsc4I	CCNNNNNNNGG	5 cut(s)	286, 300, 803, 1214, 1264
Bse118I	RCCGGY	1 cut(s)	466
Bse1I	ACTGG	5 cut(s)	544, 743, 1615, 1722, 1826
Bse21I	CCTNAGG	1 cut(s)	1209
Bse8I	GATNNNNATC	2 cut(s)	93, 363
BseDI	CCNNGG	5 cut(s)	555, 1258, 1270, 1444, 1653
BseGI	GGATG	6 cut(s)	123, 295, 645, 1301, 1663, 1840
BseJI	GATNNNNATC	2 cut(s)	93, 363
BseLI	CCNNNNNNNGG	5 cut(s)	286, 300, 803, 1214, 1264
BseMII	CTCAG	1 cut(s)	1131
BseNI	ACTGG	5 cut(s)	544, 743, 1615, 1722, 1826
BseSI	GKGCMC	1 cut(s)	411
BseX3I	CGGCCG	1 cut(s)	464
BseXI	GCAGC	3 cut(s)	645, 1417, 1583
BsgI	GTGCAG	1 cut(s)	82
Bsh1285I	CGRYCG	1 cut(s)	467
BshFI	GGCC	4 cut(s)	120, 341, 466, 1268
BshNI	GGYRCC	1 cut(s)	1085
BsiEI	CGRYCG	1 cut(s)	467
BsiHKAI	GWGCWC	1 cut(s)	1159
BsiSI	CCGG	1 cut(s)	467
BslI	CCNNNNNNNGG	5 cut(s)	286, 300, 803, 1214, 1264
BsmAI	GTCTC	2 cut(s)	1191, 1495
BsmI	GAATGC	1 cut(s)	523
BsnI	GGCC	4 cut(s)	120, 341, 466, 1268
Bso31I	GGTCTC	1 cut(s)	1191
Bsp1286I	GDGCHC	2 cut(s)	411, 1159
Bsp1407I	TGTACA	2 cut(s)	864, 993
Bsp143I	GATC	5 cut(s)	3, 88, 160, 364, 1145
BspACI	CCGC	3 cut(s)	117, 174, 1014
BspANI	GGCC	4 cut(s)	120, 341, 466, 1268
BspCNI	CTCAG	1 cut(s)	1132
BspHI	TCATGA	1 cut(s)	447
BspLI	GGNNCC	4 cut(s)	366, 1087, 1441, 1458
BspOI	GCTAGC	1 cut(s)	1388
BspPI	GGATC	5 cut(s)	83, 155, 359, 372, 1153
BspQI	GCTCTTC	1 cut(s)	322
BspT107I	GGYRCC	1 cut(s)	1085
BspTI	CTTAAG	1 cut(s)	1228
BspTNI	GGTCTC	1 cut(s)	1191
BsrBI	CCGCTC	1 cut(s)	1014
BsrFI	RCCGGY	1 cut(s)	466
BsrGI	TGTACA	2 cut(s)	864, 993
BsrI	ACTGG	5 cut(s)	544, 743, 1615, 1722, 1826
BssAI	RCCGGY	1 cut(s)	466
BssECI	CCNNGG	5 cut(s)	555, 1258, 1270, 1444, 1653
BssMI	GATC	5 cut(s)	3, 88, 160, 364, 1145
BssNAI	GTATAC	2 cut(s)	189, 1709
BssT1I	CCWWGG	2 cut(s)	1258, 1444
Bst1107I	GTATAC	2 cut(s)	189, 1709
Bst4CI	ACNGT	9 cut(s)	101, 217, 429, 632, 698, 918, 1467, 1730, 1809
Bst6I	CTCTTC	1 cut(s)	322
BstAFI	CTTAAG	1 cut(s)	1228
BstAUI	TGTACA	2 cut(s)	864, 993
BstC8I	GCNNGC	6 cut(s)	27, 73, 252, 343, 1155, 1386
BstDEI	CTNAG	2 cut(s)	1140, 1209
BstDSI	CCRYGG	2 cut(s)	1270, 1653
BstEII	GGTNACC	1 cut(s)	1016
BstENI	CCTNNNNNAGG	1 cut(s)	1212
BstF5I	GGATG	6 cut(s)	123, 295, 645, 1301, 1663, 1840
BstKTI	GATC	5 cut(s)	6, 91, 163, 367, 1148
BstMAI	GTCTC	2 cut(s)	1191, 1495
BstMBI	GATC	5 cut(s)	3, 88, 160, 364, 1145
BstMCI	CGRYCG	1 cut(s)	467
BstMWI	GCNNNNNNNGC	4 cut(s)	22, 77, 1571, 1798
BstNSI	RCATGY	1 cut(s)	1177
BstPI	GGTNACC	1 cut(s)	1016
BstSFI	CTRYAG	2 cut(s)	694, 1510
BstSLI	GKGCMC	1 cut(s)	411
BstV1I	GCAGC	3 cut(s)	645, 1417, 1583
BstX2I	RGATCY	1 cut(s)	364
BstYI	RGATCY	1 cut(s)	364
BstZ17I	GTATAC	2 cut(s)	189, 1709
BstZI	CGGCCG	1 cut(s)	464
Bsu36I	CCTNAGG	1 cut(s)	1209
BsuI	GTATCC	3 cut(s)	484, 1442, 1821
BsuRI	GGCC	4 cut(s)	120, 341, 466, 1268
BtgI	CCRYGG	2 cut(s)	1270, 1653
BtrI	CACGTC	1 cut(s)	625
BtsCI	GGATG	6 cut(s)	123, 295, 645, 1301, 1663, 1840
BtsI	GCAGTG	3 cut(s)	70, 723, 1871
BtsIMutI	CAGTG	8 cut(s)	70, 97, 213, 361, 537, 723, 1729, 1871
Cac8I	GCNNGC	6 cut(s)	27, 73, 252, 343, 1155, 1386
CciI	TCATGA	1 cut(s)	447
Cfr10I	RCCGGY	1 cut(s)	466
Cfr13I	GGNCC	1 cut(s)	1267
CseI	GACGC	1 cut(s)	859
Csp6I	GTAC	8 cut(s)	38, 615, 773, 865, 919, 994, 1086, 1171
CviQI	GTAC	8 cut(s)	38, 615, 773, 865, 919, 994, 1086, 1171
DdeI	CTNAG	2 cut(s)	1140, 1209
DpnI	GATC	5 cut(s)	5, 90, 162, 366, 1147
DpnII	GATC	5 cut(s)	3, 88, 160, 364, 1145
DraI	TTTAAA	1 cut(s)	1560
DrdI	GACNNNNNNGTC	1 cut(s)	604
DseDI	GACNNNNNNGTC	1 cut(s)	604
EaeI	YGGCCR	3 cut(s)	118, 339, 464
EagI	CGGCCG	1 cut(s)	464
Eam1104I	CTCTTC	1 cut(s)	322
EarI	CTCTTC	1 cut(s)	322
EclXI	CGGCCG	1 cut(s)	464
Eco130I	CCWWGG	2 cut(s)	1258, 1444
Eco31I	GGTCTC	1 cut(s)	1191
Eco32I	GATATC	1 cut(s)	1324
Eco52I	CGGCCG	1 cut(s)	464
Eco57I	CTGAAG	1 cut(s)	337
Eco81I	CCTNAGG	1 cut(s)	1209
Eco91I	GGTNACC	1 cut(s)	1016
EcoNI	CCTNNNNNAGG	1 cut(s)	1212
EcoO65I	GGTNACC	1 cut(s)	1016
EcoRI	GAATTC	5 cut(s)	472, 807, 881, 1098, 1778
EcoRV	GATATC	1 cut(s)	1324
EcoT14I	CCWWGG	2 cut(s)	1258, 1444
ErhI	CCWWGG	2 cut(s)	1258, 1444
FalI	AAGNNNNNCTT	6 cut(s)	127, 159, 990, 1022, 1173, 1205
FauNDI	CATATG	1 cut(s)	381
FbaI	TGATCA	1 cut(s)	3
FblI	GTMKAC	4 cut(s)	188, 700, 720, 1708
Fnu4HI	GCNGC	4 cut(s)	118, 659, 1431, 1572
FokI	GGATG	6 cut(s)	110, 302, 632, 1308, 1670, 1847
Fsp4HI	GCNGC	4 cut(s)	118, 659, 1431, 1572
FspBI	CTAG	3 cut(s)	35, 1259, 1385
GluI	GCNGC	4 cut(s)	118, 659, 1431, 1572
GsuI	CTGGAG	2 cut(s)	561, 1443
HaeIII	GGCC	4 cut(s)	120, 341, 466, 1268
HapII	CCGG	1 cut(s)	467
HgaI	GACGC	1 cut(s)	859
HincII	GTYRAC	2 cut(s)	701, 721
HindII	GTYRAC	2 cut(s)	701, 721
HindIII	AAGCTT	1 cut(s)	1004
HinfI	GANTC	7 cut(s)	150, 569, 892, 1218, 1847, 1898, 1912
HpaII	CCGG	1 cut(s)	467
HphI	GGTGA	2 cut(s)	481, 1010
Hpy166II	GTNNAC	7 cut(s)	104, 189, 628, 701, 721, 994, 1709
Hpy188I	TCNGA	9 cut(s)	128, 149, 281, 303, 559, 806, 1011, 1375, 1852
Hpy8I	GTNNAC	7 cut(s)	104, 189, 628, 701, 721, 994, 1709
Hpy99I	CGWCG	3 cut(s)	418, 421, 610
HpyAV	CCTTC	9 cut(s)	6, 53, 117, 298, 968, 1208, 1545, 1608, 1760
HpyCH4III	ACNGT	9 cut(s)	101, 217, 429, 632, 698, 918, 1467, 1730, 1809
HpyCH4IV	ACGT	2 cut(s)	419, 624
HpyF10VI	GCNNNNNNNGC	4 cut(s)	22, 77, 1571, 1798
HpyF3I	CTNAG	2 cut(s)	1140, 1209
HpySE526I	ACGT	2 cut(s)	419, 624
KpnI	GGTACC	1 cut(s)	1089
Ksp22I	TGATCA	1 cut(s)	3
Kzo9I	GATC	5 cut(s)	3, 88, 160, 364, 1145
LguI	GCTCTTC	1 cut(s)	322
LmnI	GCTCC	3 cut(s)	502, 1011, 1462
Lsp1109I	GCAGC	3 cut(s)	645, 1417, 1583
LweI	GCATC	4 cut(s)	280, 1297, 1639, 1749
MaeI	CTAG	3 cut(s)	35, 1259, 1385
MaeII	ACGT	2 cut(s)	419, 624
MaeIII	GTNAC	7 cut(s)	137, 211, 308, 392, 893, 1016, 1724
MalI	GATC	5 cut(s)	5, 90, 162, 366, 1147
MbiI	CCGCTC	1 cut(s)	1014
MboI	GATC	5 cut(s)	3, 88, 160, 364, 1145
MflI	RGATCY	1 cut(s)	364
MhlI	GDGCHC	2 cut(s)	411, 1159
MlsI	TGGCCA	1 cut(s)	341
MluNI	TGGCCA	1 cut(s)	341
MlyI	GAGTC	4 cut(s)	144, 901, 1212, 1907
MmeI	TCCRAC	3 cut(s)	172, 402, 954
Mox20I	TGGCCA	1 cut(s)	341
MroXI	GAANNNNTTC	1 cut(s)	1782
MscI	TGGCCA	1 cut(s)	341
MseI	TTAA	9 cut(s)	507, 548, 830, 957, 1032, 1229, 1418, 1559, 1927
MslI	CAYNNNNRTG	6 cut(s)	81, 99, 380, 1110, 1702, 1787
Msp20I	TGGCCA	1 cut(s)	341
MspCI	CTTAAG	1 cut(s)	1228
MspI	CCGG	1 cut(s)	467
Mva1269I	GAATGC	1 cut(s)	523
MwoI	GCNNNNNNNGC	4 cut(s)	22, 77, 1571, 1798
NdeI	CATATG	1 cut(s)	381
NdeII	GATC	5 cut(s)	3, 88, 160, 364, 1145
NheI	GCTAGC	1 cut(s)	1384
NlaIV	GGNNCC	4 cut(s)	366, 1087, 1441, 1458
NmeAIII	GCCGAG	1 cut(s)	442
NmuCI	GTSAC	5 cut(s)	211, 392, 893, 1016, 1724
NspI	RCATGY	1 cut(s)	1177
PagI	TCATGA	1 cut(s)	447
PciI	ACATGT	1 cut(s)	1173
PciSI	GCTCTTC	1 cut(s)	322
PctI	GAATGC	1 cut(s)	523
PdmI	GAANNNNTTC	1 cut(s)	1782
PfeI	GAWTC	3 cut(s)	569, 1847, 1912
PkrI	GCNGC	4 cut(s)	119, 660, 1432, 1573
PleI	GAGTC	4 cut(s)	144, 900, 1212, 1906
PpsI	GAGTC	4 cut(s)	144, 900, 1212, 1906
PscI	ACATGT	1 cut(s)	1173
PshBI	ATTAAT	1 cut(s)	507
PspEI	GGTNACC	1 cut(s)	1016
PspN4I	GGNNCC	4 cut(s)	366, 1087, 1441, 1458
PspPI	GGNCC	1 cut(s)	1267
PsrI	GAACNNNNNNTAC	2 cut(s)	1601, 1633
PsuI	RGATCY	1 cut(s)	364
RsaI	GTAC	8 cut(s)	39, 616, 774, 866, 920, 995, 1087, 1172
RsaNI	GTAC	8 cut(s)	38, 615, 773, 865, 919, 994, 1086, 1171
RseI	CAYNNNNRTG	6 cut(s)	81, 99, 380, 1110, 1702, 1787
SalI	GTCGAC	2 cut(s)	699, 719
SapI	GCTCTTC	1 cut(s)	322
SaqAI	TTAA	9 cut(s)	507, 548, 830, 957, 1032, 1229, 1418, 1559, 1927
SatI	GCNGC	4 cut(s)	118, 659, 1431, 1572
Sau3AI	GATC	5 cut(s)	3, 88, 160, 364, 1145
Sau96I	GGNCC	1 cut(s)	1267
ScaI	AGTACT	2 cut(s)	39, 774
SchI	GAGTC	4 cut(s)	144, 901, 1212, 1907
SduI	GDGCHC	2 cut(s)	411, 1159
SfaNI	GCATC	4 cut(s)	280, 1297, 1639, 1749
SfcI	CTRYAG	2 cut(s)	694, 1510
SmiI	ATTTAAAT	1 cut(s)	1560
SmiMI	CAYNNNNRTG	6 cut(s)	81, 99, 380, 1110, 1702, 1787
SmlI	CTYRAG	2 cut(s)	1228, 1893
SmoI	CTYRAG	2 cut(s)	1228, 1893
SpeI	ACTAGT	1 cut(s)	34
SsiI	CCGC	3 cut(s)	117, 174, 1014
SspMI	CTAG	3 cut(s)	35, 1259, 1385
StyI	CCWWGG	2 cut(s)	1258, 1444
SwaI	ATTTAAAT	1 cut(s)	1560
TaaI	ACNGT	9 cut(s)	101, 217, 429, 632, 698, 918, 1467, 1730, 1809
TaiI	ACGT	2 cut(s)	422, 627
TaqI	TCGA	7 cut(s)	608, 700, 720, 1320, 1493, 1739, 1910
TatI	WGTACW	5 cut(s)	37, 772, 864, 993, 1170
TauI	GCSGC	1 cut(s)	120
TfiI	GAWTC	3 cut(s)	569, 1847, 1912
Tru1I	TTAA	9 cut(s)	507, 548, 830, 957, 1032, 1229, 1418, 1559, 1927
Tru9I	TTAA	9 cut(s)	507, 548, 830, 957, 1032, 1229, 1418, 1559, 1927
TscAI	CASTG	8 cut(s)	70, 104, 220, 361, 544, 730, 1729, 1878
TseFI	GTSAC	5 cut(s)	211, 392, 893, 1016, 1724
TseI	GCWGC	3 cut(s)	658, 1430, 1571
Tsp45I	GTSAC	5 cut(s)	211, 392, 893, 1016, 1724
TspGWI	ACGGA	1 cut(s)	1670
TspRI	CASTG	8 cut(s)	70, 104, 220, 361, 544, 730, 1729, 1878
Vha464I	CTTAAG	1 cut(s)	1228
VspI	ATTAAT	1 cut(s)	507
XagI	CCTNNNNNAGG	1 cut(s)	1212
XceI	RCATGY	1 cut(s)	1177
XmaJI	CCTAGG	1 cut(s)	1258
XmiI	GTMKAC	4 cut(s)	188, 700, 720, 1708
XmnI	GAANNNNTTC	1 cut(s)	1782
XspI	CTAG	3 cut(s)	35, 1259, 1385
ZrmI	AGTACT	2 cut(s)	39, 774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.