Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004805.1

Orthogroup ID

OG0000973

Physical Location & Seq

Genomic Coordinates Forward (+)

25315 .. 34254

Gene Structure 8940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004805.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1692 bp

atgttcagaagccacaatgttgccaccagaattttcgaccgccaaatttcatctccggctcccggctctgctgttcactatgctaggcgattttacgagaatttagtccctaattataccatatatgaagttgagtgcccggaccatctgttccgtaaattcactgaggatggtcagtacctcgtatgtttcagtagaaatcatcagaaattgattgtttatagacctacctggctttcctactcctgcaaaggagactgcacttgtactgatcttcctccgaaagcgaggaggttcgagagcttctttacgcagctgtacagtgtgtcactcccttgtagcaatgagcttatatgcaaggacttctttctttacatggagagtaaccgctacggactctttgctacttctactggacaaatccatgatgcaatgtctgttggaggagctgtagtgggagtcccatctatagagaagataacctttcacctcttgagattggaggatggagttgtactggatcagaggtcctttcaccatgattttattaacctggcccataatgcgggcgcctttttgtatgatgatttactggcaattgtgtcccttcgctaccaaacactacacattctgcaaatcagagactctggataccttgttgatatacgagcaattgggacatattgtcgtgaagatgacgagctttttctcaactcacacgtgcagaatattcacgaaacagcagttgctagctttcatagtggcctcaaacagcggttgctttctttcatatttagaggaatgtggaatgaagaaacagatccgactttgagggtccaaggcctgaagaagaagttctatttccatttccaagactatgttgacttgattatctggaaggtacaattcttggaccggcaccacctgctaataaagtttggtagtgtagagggagtgatatcacgcaatactgatctccacccagccttttttgcggtatataacatggagacgactgaaattgtagcttttcatcagaattcggcagatgagctttatctcttgtttgagcagttctatgatcacttccacgcaacatcgagaaattcatatacaatgaattttgtgtcatctcactcaaataacatgcatgctcgggagcaactgagatgtgtcaaaaataaagcaagtagttctttgcagtttgtgaagaagatgctagcctctttgccttttaattgccaatcgcagagcccttctccctactttgaccaatctctttttcgatttgatgagaagttaatttctgcaactgatcggcataggcagtcaacagatcatcctatcaagttcatcttaagaaggcaaccgtgtaccctcaaatttaagattaaaccaggtccagaagctgtaacggtgtcgttctctagtcccttcctccggcgtcaagcagacgtaacgaagttgaaggaatcagctgagctctgctgccgttgtatggaagaagaggtggctgaggacgagaagaagtaccggtgcttctccgatgagggtttggttgtccgactggcttctctttatatcaaagctgaagccttcgctaaggagggaatgcttcaagtcaaatgttggatgatgtttgggataaaactgggaaagcacgtaagaagttatttcccaattcggctgtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006259 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009987 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

ko04120 map04120

Pfam Domains

Protein Families

Det1

Protein Analysis

563

Amino Acids

65.47

Weight (kDa)

8.35

Isoelectric Point (pI)

51.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000973)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G10180
fragaria_vesca	FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420 FvH4_7g04420
malus_domestica	MD02G1269900.v1.1
prunus_persica	Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1 Prupe.2G049900_v2.0.a1
pyrus_communis	pycom02g23100 pycom02g23110
rosa_chinensis	RchiOBHm_Chr1g0329651
rosa_laevigata	RLG00000029875
rosa_multiflora	Rmu_sc0004805.1_g000003 Rmu_sc0016170.1_g000019
rosa_roxburghii	Rroxscaffold_4G00320810
rosa_rugosa	Rorug01G0081800
rosa_samantha	Rh1AG100200 Rh1BG079500 Rh1CG095800 Rh1DG102300
rosa_wichuraiana	Rw1G007790 Rw1G007860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	933
Acc36I	ACCTGC	1 cut(s)	933
AccB1I	GGYRCC	2 cut(s)	569, 918
AciI	CCGC	5 cut(s)	40, 388, 566, 775, 995
AclWI	GGATC	2 cut(s)	528, 815
AcsI	RAATTY	8 cut(s)	30, 45, 100, 158, 1039, 1105, 1120, 1382
AcuI	CTGAAG	2 cut(s)	866, 1611
AcvI	CACGTG	1 cut(s)	721
AcyI	GRCGYC	2 cut(s)	570, 1444
AfaI	GTAC	7 cut(s)	179, 268, 320, 516, 903, 1375, 1532
AfiI	CCNNNNNNNGG	4 cut(s)	62, 565, 1440, 1498
AflII	CTTAAG	1 cut(s)	1357
AflIII	ACRYGT	1 cut(s)	718
AgeI	ACCGGT	1 cut(s)	1533
AgsI	TTSAA	2 cut(s)	1468, 1619
AhdI	GACNNNNNGTC	1 cut(s)	684
AjnI	CCWGG	3 cut(s)	230, 552, 1396
AjuI	GAANNNNNNNTTGG	2 cut(s)	1266, 1298
AloI	GAACNNNNNNTCC	2 cut(s)	134, 166
Alw21I	GWGCWC	1 cut(s)	1485
Alw26I	GTCTC	3 cut(s)	249, 636, 1004
AlwI	GGATC	2 cut(s)	528, 815
AlwNI	CAGNNNCTG	1 cut(s)	1409
Ama87I	CYCGRG	1 cut(s)	1155
AoxI	GGCC	3 cut(s)	555, 763, 841
ApeKI	GCWGC	2 cut(s)	313, 1488
ApoI	RAATTY	8 cut(s)	30, 45, 100, 158, 1039, 1105, 1120, 1382
AsiGI	ACCGGT	1 cut(s)	1533
Asp700I	GAANNNNTTC	1 cut(s)	854
AspLEI	GCGC	1 cut(s)	572
AspS9I	GGNCC	6 cut(s)	142, 528, 556, 835, 913, 1400
AsuC2I	CCSGG	2 cut(s)	63, 140
AsuHPI	GGTGA	2 cut(s)	479, 527
AsuNHI	GCTAGC	2 cut(s)	749, 1219
AvaI	CYCGRG	1 cut(s)	1155
AvaII	GGWCC	5 cut(s)	142, 528, 835, 913, 1400
BaeGI	GKGCMC	1 cut(s)	140
BanI	GGYRCC	2 cut(s)	569, 918
BanII	GRGCYC	2 cut(s)	1256, 1485
BarI	GAAGNNNNNNTAC	2 cut(s)	1523, 1555
BbrPI	CACGTG	1 cut(s)	721
Bbv12I	GWGCWC	1 cut(s)	1485
BbvCI	CCTCAGC	1 cut(s)	1515
BbvI	GCAGC	2 cut(s)	325, 1475
BccI	CCATC	4 cut(s)	153, 164, 472, 500
BceAI	ACGGC	1 cut(s)	1476
BciT130I	CCWGG	3 cut(s)	232, 554, 1398
BciVI	GTATCC	1 cut(s)	644
BclI	TGATCA	1 cut(s)	1081
BcnI	CCSGG	2 cut(s)	63, 140
BcoDI	GTCTC	3 cut(s)	249, 636, 1004
BfaI	CTAG	4 cut(s)	84, 750, 1220, 1428
BfmI	CTRYAG	2 cut(s)	450, 468
BfoI	RGCGCY	1 cut(s)	573
BfrI	CTTAAG	1 cut(s)	1357
BfuAI	ACCTGC	1 cut(s)	933
BfuI	GTATCC	1 cut(s)	644
BisI	GCNGC	2 cut(s)	314, 1489
BlpI	GCTNAGC	1 cut(s)	1479
BlsI	GCNGC	2 cut(s)	315, 1490
Bme1390I	CCNGG	5 cut(s)	63, 140, 232, 554, 1398
Bme18I	GGWCC	5 cut(s)	142, 528, 835, 913, 1400
BmeRI	GACNNNNNGTC	1 cut(s)	684
BmeT110I	CYCGRG	1 cut(s)	1155
BmgT120I	GGNCC	6 cut(s)	142, 528, 556, 835, 913, 1400
BmiI	GGNNCC	4 cut(s)	60, 571, 836, 920
BmrFI	CCNGG	5 cut(s)	63, 140, 232, 554, 1398
BmrI	ACTGGG	1 cut(s)	1661
BmsI	GCATC	2 cut(s)	418, 1206
BmtI	GCTAGC	2 cut(s)	753, 1223
BmuI	ACTGGG	1 cut(s)	1661
BplI	GAGNNNNNCTC	2 cut(s)	1243, 1275
Bpu10I	CCTNAGC	2 cut(s)	1515, 1602
Bpu1102I	GCTNAGC	1 cut(s)	1479
BpuEI	CTTGAG	1 cut(s)	514
BpuMI	CCSGG	2 cut(s)	63, 140
BsaAI	YACGTR	2 cut(s)	721, 1663
BsaHI	GRCGYC	2 cut(s)	570, 1444
BsaJI	CCNNGG	1 cut(s)	838
BsaWI	WCCGGW	1 cut(s)	1533
BsaXI	ACNNNNNCTCC	4 cut(s)	435, 438, 465, 468
Bsc4I	CCNNNNNNNGG	4 cut(s)	62, 565, 1440, 1498
Bse118I	RCCGGY	2 cut(s)	915, 1533
Bse1I	ACTGG	5 cut(s)	418, 522, 597, 1572, 1656
Bse3DI	GCAATG	2 cut(s)	349, 438
BseBI	CCWGG	3 cut(s)	232, 554, 1398
BseDI	CCNNGG	1 cut(s)	838
BseGI	GGATG	4 cut(s)	175, 511, 1339, 1638
BseLI	CCNNNNNNNGG	4 cut(s)	62, 565, 1440, 1498
BseMI	GCAATG	2 cut(s)	349, 438
BseMII	CTCAG	4 cut(s)	156, 1157, 1470, 1506
BseNI	ACTGG	5 cut(s)	418, 522, 597, 1572, 1656
BseRI	GAGGAG	2 cut(s)	304, 459
BseSI	GKGCMC	1 cut(s)	140
BseXI	GCAGC	2 cut(s)	325, 1475
BseYI	CCCAGC	1 cut(s)	982
BsgI	GTGCAG	2 cut(s)	244, 743
Bsh1285I	CGRYCG	1 cut(s)	40
BshFI	GGCC	3 cut(s)	557, 765, 843
BshNI	GGYRCC	2 cut(s)	569, 918
BshTI	ACCGGT	1 cut(s)	1533
BsiEI	CGRYCG	1 cut(s)	40
BsiHKAI	GWGCWC	1 cut(s)	1485
BsiHKCI	CYCGRG	1 cut(s)	1155
BsiSI	CCGG	6 cut(s)	56, 63, 140, 916, 1441, 1534
BslFI	GGGAC	5 cut(s)	92, 446, 589, 691, 1416
BslI	CCNNNNNNNGG	4 cut(s)	62, 565, 1440, 1498
BsmAI	GTCTC	3 cut(s)	249, 636, 1004
BsmBI	CGTCTC	1 cut(s)	1004
BsmFI	GGGAC	5 cut(s)	92, 446, 589, 691, 1416
BsmI	GAATGC	1 cut(s)	1617
BsnI	GGCC	3 cut(s)	557, 765, 843
BsoBI	CYCGRG	1 cut(s)	1155
Bsp1286I	GDGCHC	3 cut(s)	140, 1256, 1485
Bsp1407I	TGTACA	1 cut(s)	318
Bsp143I	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
Bsp1720I	GCTNAGC	1 cut(s)	1479
BspACI	CCGC	5 cut(s)	40, 388, 566, 775, 995
BspANI	GGCC	3 cut(s)	557, 765, 843
BspCNI	CTCAG	4 cut(s)	157, 1158, 1471, 1507
BspLI	GGNNCC	4 cut(s)	60, 571, 836, 920
BspMI	ACCTGC	1 cut(s)	933
BspOI	GCTAGC	2 cut(s)	753, 1223
BspPI	GGATC	2 cut(s)	528, 815
BspT107I	GGYRCC	2 cut(s)	569, 918
BspTI	CTTAAG	1 cut(s)	1357
BsrDI	GCAATG	2 cut(s)	349, 438
BsrFI	RCCGGY	2 cut(s)	915, 1533
BsrGI	TGTACA	1 cut(s)	318
BsrI	ACTGG	5 cut(s)	418, 522, 597, 1572, 1656
BssAI	RCCGGY	2 cut(s)	915, 1533
BssECI	CCNNGG	1 cut(s)	838
BssMI	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
BssNI	GRCGYC	2 cut(s)	570, 1444
BssT1I	CCWWGG	1 cut(s)	838
Bst2UI	CCWGG	3 cut(s)	232, 554, 1398
Bst4CI	ACNGT	3 cut(s)	323, 1371, 1417
Bst6I	CTCTTC	1 cut(s)	1500
BstACI	GRCGYC	2 cut(s)	570, 1444
BstAFI	CTTAAG	1 cut(s)	1357
BstAPI	GCANNNNNTGC	1 cut(s)	925
BstAUI	TGTACA	1 cut(s)	318
BstBAI	YACGTR	2 cut(s)	721, 1663
BstC8I	GCNNGC	4 cut(s)	568, 751, 1152, 1221
BstDEI	CTNAG	5 cut(s)	165, 1166, 1479, 1515, 1602
BstF5I	GGATG	4 cut(s)	175, 511, 1339, 1638
BstH2I	RGCGCY	1 cut(s)	573
BstHHI	GCGC	1 cut(s)	572
BstKTI	GATC	7 cut(s)	274, 523, 823, 976, 1084, 1318, 1339
BstMAI	GTCTC	3 cut(s)	249, 636, 1004
BstMBI	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
BstMCI	CGRYCG	1 cut(s)	40
BstMWI	GCNNNNNNNGC	3 cut(s)	563, 925, 992
BstNI	CCWGG	3 cut(s)	232, 554, 1398
BstNSI	RCATGY	2 cut(s)	1150, 1154
BstSCI	CCNGG	5 cut(s)	61, 138, 230, 552, 1396
BstSFI	CTRYAG	2 cut(s)	450, 468
BstSLI	GKGCMC	1 cut(s)	140
BstV1I	GCAGC	2 cut(s)	325, 1475
BstX2I	RGATCY	1 cut(s)	820
BstYI	RGATCY	1 cut(s)	820
BsuI	GTATCC	1 cut(s)	644
BsuRI	GGCC	3 cut(s)	557, 765, 843
BtsCI	GGATG	4 cut(s)	175, 511, 1339, 1638
BtsIMutI	CAGTG	2 cut(s)	162, 328
BveI	ACCTGC	1 cut(s)	933
Cac8I	GCNNGC	4 cut(s)	568, 751, 1152, 1221
CaiI	CAGNNNCTG	1 cut(s)	1409
CfoI	GCGC	1 cut(s)	572
Cfr10I	RCCGGY	2 cut(s)	915, 1533
Cfr13I	GGNCC	6 cut(s)	142, 528, 556, 835, 913, 1400
CseI	GACGC	1 cut(s)	1433
CsiI	ACCWGGT	1 cut(s)	1396
Csp6I	GTAC	7 cut(s)	178, 267, 319, 515, 902, 1374, 1531
CspAI	ACCGGT	1 cut(s)	1533
CviAII	CATG	6 cut(s)	376, 425, 539, 1006, 1147, 1151
CviQI	GTAC	7 cut(s)	178, 267, 319, 515, 902, 1374, 1531
DdeI	CTNAG	5 cut(s)	165, 1166, 1479, 1515, 1602
DinI	GGCGCC	1 cut(s)	571
DpnI	GATC	7 cut(s)	273, 522, 822, 975, 1083, 1317, 1338
DpnII	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
DriI	GACNNNNNGTC	1 cut(s)	684
Eam1104I	CTCTTC	1 cut(s)	1500
Eam1105I	GACNNNNNGTC	1 cut(s)	684
EarI	CTCTTC	1 cut(s)	1500
Ecl136II	GAGCTC	1 cut(s)	1483
Eco130I	CCWWGG	1 cut(s)	838
Eco147I	AGGCCT	1 cut(s)	843
Eco24I	GRGCYC	2 cut(s)	1256, 1485
Eco32I	GATATC	1 cut(s)	960
Eco47I	GGWCC	5 cut(s)	142, 528, 835, 913, 1400
Eco53kI	GAGCTC	1 cut(s)	1483
Eco57I	CTGAAG	2 cut(s)	866, 1611
Eco72I	CACGTG	1 cut(s)	721
Eco88I	CYCGRG	1 cut(s)	1155
EcoICRI	GAGCTC	1 cut(s)	1483
EcoO109I	RGGNCCY	1 cut(s)	528
EcoRI	GAATTC	1 cut(s)	1039
EcoRII	CCWGG	3 cut(s)	230, 552, 1396
EcoRV	GATATC	1 cut(s)	960
EcoT14I	CCWWGG	1 cut(s)	838
EcoT22I	ATGCAT	1 cut(s)	1152
EcoT38I	GRGCYC	2 cut(s)	1256, 1485
EgeI	GGCGCC	1 cut(s)	571
EheI	GGCGCC	1 cut(s)	571
ErhI	CCWWGG	1 cut(s)	838
Esp3I	CGTCTC	1 cut(s)	1004
FaeI	CATG	6 cut(s)	379, 428, 542, 1009, 1150, 1154
FalI	AAGNNNNNCTT	8 cut(s)	350, 382, 467, 499, 1180, 1212, 1340, 1372
FaqI	GGGAC	5 cut(s)	92, 446, 589, 691, 1416
FatI	CATG	6 cut(s)	375, 424, 538, 1005, 1146, 1150
FauI	CCCGC	1 cut(s)	559
FbaI	TGATCA	1 cut(s)	1081
Fnu4HI	GCNGC	2 cut(s)	314, 1489
FokI	GGATG	4 cut(s)	182, 518, 1326, 1645
FriOI	GRGCYC	2 cut(s)	1256, 1485
Fsp4HI	GCNGC	2 cut(s)	314, 1489
FspBI	CTAG	4 cut(s)	84, 750, 1220, 1428
GlaI	GCGC	1 cut(s)	571
GluI	GCNGC	2 cut(s)	314, 1489
GsaI	CCCAGC	1 cut(s)	986
HaeII	RGCGCY	1 cut(s)	573
HaeIII	GGCC	3 cut(s)	557, 765, 843
HapII	CCGG	6 cut(s)	56, 63, 140, 916, 1441, 1534
HgaI	GACGC	1 cut(s)	1433
HhaI	GCGC	1 cut(s)	572
Hin1I	GRCGYC	2 cut(s)	570, 1444
Hin1II	CATG	6 cut(s)	379, 428, 542, 1009, 1150, 1154
Hin6I	GCGC	1 cut(s)	570
HinP1I	GCGC	1 cut(s)	570
HincII	GTYRAC	2 cut(s)	883, 1332
HindII	GTYRAC	2 cut(s)	883, 1332
HinfI	GANTC	4 cut(s)	396, 459, 644, 1472
HpaII	CCGG	6 cut(s)	56, 63, 140, 916, 1441, 1534
HphI	GGTGA	2 cut(s)	479, 527
Hpy166II	GTNNAC	4 cut(s)	76, 883, 1332, 1374
Hpy188I	TCNGA	9 cut(s)	8, 207, 282, 525, 641, 825, 1038, 1546, 1565
Hpy188III	TCNNGA	9 cut(s)	298, 493, 648, 689, 734, 895, 1101, 1157, 1403
Hpy8I	GTNNAC	4 cut(s)	76, 883, 1332, 1374
HpyAV	CCTTC	7 cut(s)	617, 892, 1266, 1356, 1444, 1462, 1606
HpyCH4III	ACNGT	3 cut(s)	323, 1371, 1417
HpyCH4IV	ACGT	3 cut(s)	720, 1455, 1662
HpyCH4V	TGCA	9 cut(s)	249, 261, 357, 431, 634, 724, 1150, 1201, 1310
HpyF10VI	GCNNNNNNNGC	3 cut(s)	563, 925, 992
HpyF3I	CTNAG	5 cut(s)	165, 1166, 1479, 1515, 1602
HpySE526I	ACGT	3 cut(s)	720, 1455, 1662
Hsp92I	GRCGYC	2 cut(s)	570, 1444
Hsp92II	CATG	6 cut(s)	379, 428, 542, 1009, 1150, 1154
HspAI	GCGC	1 cut(s)	570
KasI	GGCGCC	1 cut(s)	569
Ksp22I	TGATCA	1 cut(s)	1081
Kzo9I	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
LmnI	GCTCC	3 cut(s)	64, 446, 1159
Lsp1109I	GCAGC	2 cut(s)	325, 1475
LweI	GCATC	2 cut(s)	418, 1206
MabI	ACCWGGT	1 cut(s)	1396
MaeI	CTAG	4 cut(s)	84, 750, 1220, 1428
MaeII	ACGT	3 cut(s)	720, 1455, 1662
MaeIII	GTNAC	4 cut(s)	327, 383, 1411, 1456
MalI	GATC	7 cut(s)	273, 522, 822, 975, 1083, 1317, 1338
MboI	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
MfeI	CAATTG	2 cut(s)	597, 672
MflI	RGATCY	1 cut(s)	820
MhlI	GDGCHC	3 cut(s)	140, 1256, 1485
Mly113I	GGCGCC	1 cut(s)	570
MlyI	GAGTC	3 cut(s)	390, 468, 638
MmeI	TCCRAC	4 cut(s)	421, 848, 1588, 1610
Mph1103I	ATGCAT	1 cut(s)	1152
MroXI	GAANNNNTTC	1 cut(s)	854
MseI	TTAA	6 cut(s)	549, 1236, 1301, 1358, 1386, 1392
MspA1I	CMGCKG	3 cut(s)	316, 775, 1478
MspCI	CTTAAG	1 cut(s)	1357
MspI	CCGG	6 cut(s)	56, 63, 140, 916, 1441, 1534
MspR9I	CCNGG	5 cut(s)	63, 140, 232, 554, 1398
MunI	CAATTG	2 cut(s)	597, 672
Mva1269I	GAATGC	1 cut(s)	1617
MvaI	CCWGG	3 cut(s)	232, 554, 1398
MwoI	GCNNNNNNNGC	3 cut(s)	563, 925, 992
NarI	GGCGCC	1 cut(s)	570
NciI	CCSGG	2 cut(s)	63, 140
NdeII	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
NheI	GCTAGC	2 cut(s)	749, 1219
NlaIII	CATG	6 cut(s)	379, 428, 542, 1009, 1150, 1154
NlaIV	GGNNCC	4 cut(s)	60, 571, 836, 920
NmuCI	GTSAC	1 cut(s)	327
NsiI	ATGCAT	1 cut(s)	1152
NspI	RCATGY	2 cut(s)	1150, 1154
PaeI	GCATGC	1 cut(s)	1154
PaqCI	CACCTGC	1 cut(s)	933
PceI	AGGCCT	1 cut(s)	843
PctI	GAATGC	1 cut(s)	1617
PdmI	GAANNNNTTC	1 cut(s)	854
PfeI	GAWTC	1 cut(s)	1472
PinAI	ACCGGT	1 cut(s)	1533
PkrI	GCNGC	2 cut(s)	315, 1490
PleI	GAGTC	3 cut(s)	390, 467, 638
PluTI	GGCGCC	1 cut(s)	573
PmaCI	CACGTG	1 cut(s)	721
PmlI	CACGTG	1 cut(s)	721
PpsI	GAGTC	3 cut(s)	390, 467, 638
Ppu21I	YACGTR	2 cut(s)	721, 1663
PpuMI	RGGWCCY	1 cut(s)	528
Psp124BI	GAGCTC	1 cut(s)	1485
Psp5II	RGGWCCY	1 cut(s)	528
Psp6I	CCWGG	3 cut(s)	230, 552, 1396
PspCI	CACGTG	1 cut(s)	721
PspFI	CCCAGC	1 cut(s)	982
PspGI	CCWGG	3 cut(s)	230, 552, 1396
PspN4I	GGNNCC	4 cut(s)	60, 571, 836, 920
PspPI	GGNCC	6 cut(s)	142, 528, 556, 835, 913, 1400
PspPPI	RGGWCCY	1 cut(s)	528
PstNI	CAGNNNCTG	1 cut(s)	1409
PsuI	RGATCY	1 cut(s)	820
PvuII	CAGCTG	2 cut(s)	316, 1478
RsaI	GTAC	7 cut(s)	179, 268, 320, 516, 903, 1375, 1532
RsaNI	GTAC	7 cut(s)	178, 267, 319, 515, 902, 1374, 1531
SacI	GAGCTC	1 cut(s)	1485
SaqAI	TTAA	6 cut(s)	549, 1236, 1301, 1358, 1386, 1392
SatI	GCNGC	2 cut(s)	314, 1489
Sau3AI	GATC	7 cut(s)	271, 520, 820, 973, 1081, 1315, 1336
Sau96I	GGNCC	6 cut(s)	142, 528, 556, 835, 913, 1400
SchI	GAGTC	3 cut(s)	390, 468, 638
ScrFI	CCNGG	5 cut(s)	63, 140, 232, 554, 1398
SduI	GDGCHC	3 cut(s)	140, 1256, 1485
SexAI	ACCWGGT	1 cut(s)	1396
SfaNI	GCATC	2 cut(s)	418, 1206
SfcI	CTRYAG	2 cut(s)	450, 468
SfoI	GGCGCC	1 cut(s)	571
SinI	GGWCC	5 cut(s)	142, 528, 835, 913, 1400
SmlI	CTYRAG	2 cut(s)	493, 1357
SmoI	CTYRAG	2 cut(s)	493, 1357
SphI	GCATGC	1 cut(s)	1154
SseBI	AGGCCT	1 cut(s)	843
SsiI	CCGC	5 cut(s)	40, 388, 566, 775, 995
SspDI	GGCGCC	1 cut(s)	569
SspI	AATATT	1 cut(s)	730
SspMI	CTAG	4 cut(s)	84, 750, 1220, 1428
SstI	GAGCTC	1 cut(s)	1485
StuI	AGGCCT	1 cut(s)	843
StyD4I	CCNGG	5 cut(s)	61, 138, 230, 552, 1396
StyI	CCWWGG	1 cut(s)	838
TaaI	ACNGT	3 cut(s)	323, 1371, 1417
TaiI	ACGT	3 cut(s)	723, 1458, 1665
TaqI	TCGA	4 cut(s)	36, 297, 1100, 1285
TatI	WGTACW	3 cut(s)	266, 318, 514
TfiI	GAWTC	1 cut(s)	1472
Tru1I	TTAA	6 cut(s)	549, 1236, 1301, 1358, 1386, 1392
Tru9I	TTAA	6 cut(s)	549, 1236, 1301, 1358, 1386, 1392
TscAI	CASTG	2 cut(s)	169, 328
TseFI	GTSAC	1 cut(s)	327
TseI	GCWGC	2 cut(s)	313, 1488
Tsp45I	GTSAC	1 cut(s)	327
TspDTI	ATGAA	9 cut(s)	39, 141, 746, 778, 825, 1022, 1098, 1133, 1342
TspGWI	ACGGA	2 cut(s)	143, 408
TspRI	CASTG	2 cut(s)	169, 328
Vha464I	CTTAAG	1 cut(s)	1357
VpaK11BI	GGWCC	5 cut(s)	142, 528, 835, 913, 1400
XapI	RAATTY	8 cut(s)	30, 45, 100, 158, 1039, 1105, 1120, 1382
XceI	RCATGY	2 cut(s)	1150, 1154
XmnI	GAANNNNTTC	1 cut(s)	854
XspI	CTAG	4 cut(s)	84, 750, 1220, 1428
Zsp2I	ATGCAT	1 cut(s)	1152

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.