FvH4_7g09420

Pentatricopeptide repeat-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
9056095 .. 9060113
4019 bp
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UTR
Exon/CDS
Intron
FvH4_7g09420.t3

Sequence Viewer

Length: 2052 bp
ATGGAAGGTTTATCAGTAACCTCACCAAGTCTCTTTCTCCAAATCCACTCTTTCCCGCCAAATTTTCACTTCCCGGCCACCGCCACCAACTATGACAACCTCAACACCCCCCACCACCGCGCCTTCAACCTCCACGCTCTGTCACGCCGCCACCGGAAGCCTCCCTCATTCGAAGAACGCGACGCGTTCCCGGAGTCACTACCGCTCCACACGAAGAACCCACGCGCCGTCTACAAGGACATCCAAAGATTCGCCGCACAAAACAAGCTCAACGAGGCTCTCACGATTCTGGACTACCTTGACCAGCAGGGCATCCCGGTCAACGCCACCACATTCTCCCACCTCATCACCGCCTGTGTCCGCACCAGGTCACTCGACACCGGAAAGAAGATTCACAAGTACATTTGGATCAACGGACTCGAAAGCAGCGAGTTTCTGAGGCAGAAATTGGTGAACATGTACACGAGTTTCGGGGCGGTTGATGATGCACACCACCTGTTTGATCAAATGCCTGGGAAGAATGTGTACACGTGGAATGCGTTGCTGAGAGGGACGGTGGTTGCGGGAGGGAAGCGGTACCGGGACGTGCTGGAGACGTATTCGGAGATGAGGGAGCTTGGGGTGGAGATGAATGTGTATAGCTTCTCGAATGTGATCAAGAGCTTTGCGGGAGCCTCGGCTCTTTCGCAGGGTTTGAAGACGCACGCGCTGTTGGTGAAGAATGGTTTGATTGGGAGTGTGATTGTGAGGACGAGTTTGGTGGATATGTATTTCAAATGTGGGAAGATTAAGCTTGCGAGGTTGGTGTTTGAGGAGGTGGGTGAGAGGGATGTGGTTTTGTGGGGAGCTATGATTGCGGGGTTTGCGCATAATAGGCTGCGTAAGGAAGCTTTGCAGCATTTGAGGATAATGGTGGAGGAAGGGATAATGCCGAATTCGGTTATATTGACGAGTGTGCTTCCGGTGATTGGGGAGCTTTCAGCACGAAAGCTTGGGCAGGAAGCGCATGCCTATGTGGTGAAGACAAAGAGCTATTTGAGGCAGGCGTTTGTTCAGTCTGCGTTGATAGATATGTATTGTAAGTGCGGTGACATGGAGATGGGAAGACGGGTGTTTTATAGTTCGGTGGAGAGGAATGCAATTTGTTGGACTGCTTTGATGTCGGGTTACGCTGCAAATGGGAGGCTGGAGCAGGCATTGAGGTCGGTCATTTGGATGCAGCAGGAAGGGTTTAAGCCGGATGTGGTCACGGTTGCCACTGCCCTTCCGGTTTGTGCAGAGTTGAAGGATTTGAAACGAGGGAAGGAGATTCATGCTTATGCTGTGAAGAATTGCTTCTTGCCCAATGTATCTATTGTTTCTTCTTTAATGGTGATGTACTCCAAGTGTGGCGTCTTGGACTACTCTATAAGATTATTTGATGGAATGGAGCAGAGAAATGTTATTACGTGGACAGCCATGATAGATTCCCTTGTCGAAAATGGGTGTCTAGATGGGGCACTTGGTGTCATAAGGTCAATGCTTTTGTCAAAGCACAGACCAGATTCTGTTGCAATGTCAAGGATGTTGGCTATTTGCGGGGGACTAAAGAATTTGAAGCTTGGGAAGGAAATCCATGCACAAGTTTTGAAAAAGAATTTTGACTCCGTCCCTTTTGTTTCTGCTGAACTTGTGAAAATGTATGGGCGCTGTGCAGCAATTGATCATGCAAAGTCATTTTTCGATACAATTCCAGTCAAGGGTTCAATGACACGGACTGCAATCATAGAAGCTTATGGATATGCTGGGATGTATCAAGAAGCTATTAGTCTATTTGATCAGATGAGATCTAAAGACTTGACTCCAAACAATTTCACTTTCCAGGTGGTTCTATCTATTTGTGACCGAGCTGGATTTGTTGATGACGCTTGCCGTATCTTCCATTTGATATCTCGGAGATATAAAATCAGGGTGACTCAAGAACAATACTCTCTACTCATTGGACTTCTTACTCGATCCGGCCGCGTTGAGGAAGCTCAGAGATTTATTCAAATGAGCTCATCTTTAGTATAA

Protein Analysis

684

Amino Acids

76.79

Weight (kDa)

9.26

Isoelectric Point (pI)

38.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 173 - 223 8.9e-07 PPR repeat family
PPR_2 PF13041 379 - 422 1.5e-08 PPR repeat family
PPR_2 PF13041 583 - 625 1.6e-08 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 867
Acc65I GGTACC 1 cut(s) 576
AccB1I GGYRCC 1 cut(s) 576
AccBSI CCGCTC 1 cut(s) 205
AccI GTMKAC 1 cut(s) 231
AccII CGCG 6 cut(s) 120, 180, 185, 225, 707, 2004
AclWI GGATC 2 cut(s) 416, 1989
AcoI YGGCCR 2 cut(s) 75, 1999
AcsI RAATTY 4 cut(s) 61, 934, 1591, 1636
AcvI CACGTG 1 cut(s) 531
AcyI GRCGYC 1 cut(s) 1392
AdeI CACNNNGTG 1 cut(s) 1505
AfaI GTAC 5 cut(s) 401, 461, 527, 578, 1379
AfiI CCNNNNNNNGG 3 cut(s) 968, 1739, 2008
AflIII ACRYGT 3 cut(s) 183, 456, 528
AgsI TTSAA 9 cut(s) 127, 697, 775, 1285, 1294, 1597, 1630, 1746, 2030
AjiI CACGTC 1 cut(s) 586
AjnI CCWGG 3 cut(s) 365, 511, 1860
Alw21I GWGCWC 1 cut(s) 2039
Alw26I GTCTC 2 cut(s) 35, 587
AlwI GGATC 2 cut(s) 416, 1989
AlwNI CAGNNNCTG 1 cut(s) 1547
AoxI GGCC 2 cut(s) 75, 1999
ApeKI GCWGC 6 cut(s) 426, 877, 895, 1172, 1219, 1694
ApoI RAATTY 4 cut(s) 61, 934, 1591, 1636
Asp700I GAANNNNTTC 1 cut(s) 1334
Asp718I GGTACC 1 cut(s) 576
AspLEI GCGC 6 cut(s) 122, 227, 709, 868, 1006, 1689
AsuC2I CCSGG 4 cut(s) 74, 191, 317, 581
AsuII TTCGAA 1 cut(s) 171
BaeGI GKGCMC 1 cut(s) 1501
BanI GGYRCC 1 cut(s) 576
BanII GRGCYC 1 cut(s) 2039
BarI GAAGNNNNNNTAC 2 cut(s) 509, 541
BauI CACGAG 1 cut(s) 463
BbrPI CACGTG 1 cut(s) 531
BbsI GAAGAC 3 cut(s) 704, 1028, 1111
Bbv12I GWGCWC 1 cut(s) 2039
BbvI GCAGC 6 cut(s) 438, 864, 907, 1159, 1231, 1706
BccI CCATC 3 cut(s) 1093, 1415, 1487
BceAI ACGGC 2 cut(s) 212, 1896
BcgI CGANNNNNNTGC 2 cut(s) 1185, 1219
BciT130I CCWGG 3 cut(s) 367, 513, 1862
BclI TGATCA 4 cut(s) 502, 654, 1702, 1816
BcnI CCSGG 4 cut(s) 74, 191, 317, 581
BcoDI GTCTC 2 cut(s) 35, 587
BfaI CTAG 1 cut(s) 1490
BfoI RGCGCY 1 cut(s) 1690
BglII AGATCT 1 cut(s) 1826
BisI GCNGC 9 cut(s) 148, 255, 427, 878, 896, 1173, 1220, 1695, 2002
BlsI GCNGC 9 cut(s) 149, 256, 428, 879, 897, 1174, 1221, 1696, 2003
Bme1390I CCNGG 7 cut(s) 74, 191, 317, 367, 513, 581, 1862
BmgBI CACGTC 1 cut(s) 586
BmiI GGNNCC 2 cut(s) 578, 673
BmrFI CCNGG 7 cut(s) 74, 191, 317, 367, 513, 581, 1862
BmsI GCATC 3 cut(s) 321, 475, 1206
BpiI GAAGAC 3 cut(s) 704, 1028, 1111
BpmI CTGGAG 2 cut(s) 611, 1208
Bpu14I TTCGAA 1 cut(s) 171
BpuEI CTTGAG 1 cut(s) 1941
BpuMI CCSGG 4 cut(s) 74, 191, 317, 581
BsaAI YACGTR 2 cut(s) 531, 1449
BsaHI GRCGYC 1 cut(s) 1392
BsaJI CCNNGG 2 cut(s) 512, 675
BsaWI WCCGGW 4 cut(s) 153, 380, 961, 1267
BsaXI ACNNNNNCTCC 2 cut(s) 189, 219
Bsc4I CCNNNNNNNGG 3 cut(s) 968, 1739, 2008
Bse1I ACTGG 1 cut(s) 1733
Bse3DI GCAATG 1 cut(s) 1560
BseBI CCWGG 3 cut(s) 367, 513, 1862
BseDI CCNNGG 2 cut(s) 512, 675
BseGI GGATG 7 cut(s) 240, 312, 835, 1221, 1246, 1569, 1794
BseLI CCNNNNNNNGG 3 cut(s) 968, 1739, 2008
BseMI GCAATG 1 cut(s) 1560
BseMII CTCAG 3 cut(s) 428, 536, 2030
BseNI ACTGG 1 cut(s) 1733
BseRI GAGGAG 1 cut(s) 827
BseSI GKGCMC 1 cut(s) 1501
BseX3I CGGCCG 1 cut(s) 1999
BseXI GCAGC 6 cut(s) 438, 864, 907, 1159, 1231, 1706
BseYI CCCAGC 1 cut(s) 1784
BsgI GTGCAG 2 cut(s) 1296, 1713
Bsh1236I CGCG 6 cut(s) 120, 180, 185, 225, 707, 2004
Bsh1285I CGRYCG 1 cut(s) 2002
BshFI GGCC 2 cut(s) 77, 2001
BshNI GGYRCC 1 cut(s) 576
BsiEI CGRYCG 1 cut(s) 2002
BsiHKAI GWGCWC 1 cut(s) 2039
BslFI GGGAC 4 cut(s) 565, 596, 1596, 1634
BslI CCNNNNNNNGG 3 cut(s) 968, 1739, 2008
BsmAI GTCTC 2 cut(s) 35, 587
BsmBI CGTCTC 1 cut(s) 587
BsmFI GGGAC 4 cut(s) 565, 596, 1596, 1634
BsmI GAATGC 2 cut(s) 541, 1141
BsnI GGCC 2 cut(s) 77, 2001
Bsp119I TTCGAA 1 cut(s) 171
Bsp1286I GDGCHC 2 cut(s) 1501, 2039
Bsp1407I TGTACA 2 cut(s) 459, 525
Bsp143I GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
BspANI GGCC 2 cut(s) 77, 2001
BspCNI CTCAG 3 cut(s) 429, 537, 2029
BspFNI CGCG 6 cut(s) 120, 180, 185, 225, 707, 2004
BspLI GGNNCC 2 cut(s) 578, 673
BspPI GGATC 2 cut(s) 416, 1989
BspT104I TTCGAA 1 cut(s) 171
BspT107I GGYRCC 1 cut(s) 576
BsrBI CCGCTC 1 cut(s) 205
BsrDI GCAATG 1 cut(s) 1560
BsrGI TGTACA 2 cut(s) 459, 525
BsrI ACTGG 1 cut(s) 1733
BssECI CCNNGG 2 cut(s) 512, 675
BssMI GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
BssNI GRCGYC 1 cut(s) 1392
BssSI CACGAG 1 cut(s) 463
Bst2BI CACGAG 1 cut(s) 463
Bst2UI CCWGG 3 cut(s) 367, 513, 1862
Bst4CI ACNGT 2 cut(s) 556, 1252
BstACI GRCGYC 1 cut(s) 1392
BstAUI TGTACA 2 cut(s) 459, 525
BstBAI YACGTR 2 cut(s) 531, 1449
BstBI TTCGAA 1 cut(s) 171
BstC8I GCNNGC 6 cut(s) 705, 795, 1008, 1044, 1194, 1909
BstDEI CTNAG 3 cut(s) 437, 545, 2016
BstF5I GGATG 7 cut(s) 240, 312, 835, 1221, 1246, 1569, 1794
BstFNI CGCG 6 cut(s) 120, 180, 185, 225, 707, 2004
BstH2I RGCGCY 1 cut(s) 1690
BstHHI GCGC 6 cut(s) 122, 227, 709, 868, 1006, 1689
BstKTI GATC 7 cut(s) 411, 505, 657, 1705, 1819, 1829, 1997
BstMAI GTCTC 2 cut(s) 35, 587
BstMBI GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
BstMCI CGRYCG 1 cut(s) 2002
BstMWI GCNNNNNNNGC 4 cut(s) 854, 863, 874, 1003
BstNI CCWGG 3 cut(s) 367, 513, 1862
BstNSI RCATGY 2 cut(s) 460, 1010
BstSCI CCNGG 7 cut(s) 72, 189, 315, 365, 511, 579, 1860
BstSLI GKGCMC 1 cut(s) 1501
BstUI CGCG 6 cut(s) 120, 180, 185, 225, 707, 2004
BstV1I GCAGC 6 cut(s) 438, 864, 907, 1159, 1231, 1706
BstV2I GAAGAC 3 cut(s) 704, 1028, 1111
BstX2I RGATCY 1 cut(s) 1826
BstYI RGATCY 1 cut(s) 1826
BstZI CGGCCG 1 cut(s) 1999
BsuRI GGCC 2 cut(s) 77, 2001
BtrI CACGTC 1 cut(s) 586
BtsCI GGATG 7 cut(s) 240, 312, 835, 1221, 1246, 1569, 1794
BtsI GCAGTG 1 cut(s) 1257
BtsIMutI CAGTG 1 cut(s) 1257
Cac8I GCNNGC 6 cut(s) 705, 795, 1008, 1044, 1194, 1909
CaiI CAGNNNCTG 1 cut(s) 1547
CfoI GCGC 6 cut(s) 122, 227, 709, 868, 1006, 1689
CseI GACGC 4 cut(s) 191, 709, 1381, 1913
CsiI ACCWGGT 1 cut(s) 365
Csp6I GTAC 5 cut(s) 400, 460, 526, 577, 1378
CviAII CATG 7 cut(s) 457, 1007, 1093, 1313, 1459, 1616, 1706
CviQI GTAC 5 cut(s) 400, 460, 526, 577, 1378
DdeI CTNAG 3 cut(s) 437, 545, 2016
DpnI GATC 7 cut(s) 410, 504, 656, 1704, 1818, 1828, 1996
DpnII GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
DraIII CACNNNGTG 1 cut(s) 1505
EaeI YGGCCR 2 cut(s) 75, 1999
EagI CGGCCG 1 cut(s) 1999
Ecl136II GAGCTC 1 cut(s) 2037
EclXI CGGCCG 1 cut(s) 1999
Eco24I GRGCYC 1 cut(s) 2039
Eco32I GATATC 1 cut(s) 1929
Eco52I CGGCCG 1 cut(s) 1999
Eco53kI GAGCTC 1 cut(s) 2037
Eco72I CACGTG 1 cut(s) 531
EcoICRI GAGCTC 1 cut(s) 2037
EcoRI GAATTC 1 cut(s) 934
EcoRII CCWGG 3 cut(s) 365, 511, 1860
EcoRV GATATC 1 cut(s) 1929
EcoT38I GRGCYC 1 cut(s) 2039
Esp3I CGTCTC 1 cut(s) 587
FaeI CATG 7 cut(s) 460, 1010, 1096, 1316, 1462, 1619, 1709
FalI AAGNNNNNCTT 2 cut(s) 1319, 1351
FaqI GGGAC 4 cut(s) 565, 596, 1596, 1634
FatI CATG 7 cut(s) 456, 1006, 1092, 1312, 1458, 1615, 1705
FauI CCCGC 5 cut(s) 63, 556, 661, 850, 1571
FbaI TGATCA 4 cut(s) 502, 654, 1702, 1816
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 9 cut(s) 148, 255, 427, 878, 896, 1173, 1220, 1695, 2002
FokI GGATG 7 cut(s) 227, 299, 842, 1228, 1253, 1576, 1801
FriOI GRGCYC 1 cut(s) 2039
Fsp4HI GCNGC 9 cut(s) 148, 255, 427, 878, 896, 1173, 1220, 1695, 2002
FspBI CTAG 1 cut(s) 1490
FspI TGCGCA 1 cut(s) 867
GlaI GCGC 6 cut(s) 121, 226, 708, 867, 1005, 1688
GluI GCNGC 9 cut(s) 148, 255, 427, 878, 896, 1173, 1220, 1695, 2002
GsaI CCCAGC 1 cut(s) 1788
GsuI CTGGAG 2 cut(s) 611, 1208
HaeII RGCGCY 1 cut(s) 1690
HaeIII GGCC 2 cut(s) 77, 2001
HgaI GACGC 4 cut(s) 191, 709, 1381, 1913
HhaI GCGC 6 cut(s) 122, 227, 709, 868, 1006, 1689
Hin1I GRCGYC 1 cut(s) 1392
Hin1II CATG 7 cut(s) 460, 1010, 1096, 1316, 1462, 1619, 1709
Hin6I GCGC 6 cut(s) 120, 225, 707, 866, 1004, 1687
HinP1I GCGC 6 cut(s) 120, 225, 707, 866, 1004, 1687
HincII GTYRAC 1 cut(s) 322
HindII GTYRAC 1 cut(s) 322
HindIII AAGCTT 5 cut(s) 791, 888, 989, 1598, 1770
Hpy166II GTNNAC 7 cut(s) 232, 322, 454, 462, 526, 528, 1452
Hpy188I TCNGA 5 cut(s) 438, 604, 1821, 1935, 2019
Hpy188III TCNNGA 7 cut(s) 283, 290, 646, 658, 1490, 1796, 1958
Hpy8I GTNNAC 7 cut(s) 232, 322, 454, 462, 526, 528, 1452
Hpy99I CGWCG 1 cut(s) 185
HpyAV CCTTC 7 cut(s) 133, 914, 1220, 1274, 1279, 1297, 1600
HpyCH4III ACNGT 2 cut(s) 556, 1252
HpyCH4IV ACGT 4 cut(s) 530, 585, 596, 1448
HpyF10VI GCNNNNNNNGC 4 cut(s) 854, 863, 874, 1003
HpyF3I CTNAG 3 cut(s) 437, 545, 2016
HpySE526I ACGT 4 cut(s) 530, 585, 596, 1448
Hsp92I GRCGYC 1 cut(s) 1392
Hsp92II CATG 7 cut(s) 460, 1010, 1096, 1316, 1462, 1619, 1709
HspAI GCGC 6 cut(s) 120, 225, 707, 866, 1004, 1687
KpnI GGTACC 1 cut(s) 580
Ksp22I TGATCA 4 cut(s) 502, 654, 1702, 1816
Kzo9I GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
LmnI GCTCC 7 cut(s) 210, 613, 671, 845, 973, 1189, 1429
Lsp1109I GCAGC 6 cut(s) 438, 864, 907, 1159, 1231, 1706
LweI GCATC 3 cut(s) 321, 475, 1206
MabI ACCWGGT 1 cut(s) 365
MaeI CTAG 1 cut(s) 1490
MaeII ACGT 4 cut(s) 530, 585, 596, 1448
MaeIII GTNAC 9 cut(s) 16, 141, 195, 369, 1088, 1166, 1246, 1880, 1951
MalI GATC 7 cut(s) 410, 504, 656, 1704, 1818, 1828, 1996
MbiI CCGCTC 1 cut(s) 205
MboI GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
MfeI CAATTG 1 cut(s) 1698
MflI RGATCY 1 cut(s) 1826
MhlI GDGCHC 2 cut(s) 1501, 2039
MluI ACGCGT 1 cut(s) 183
MlyI GAGTC 5 cut(s) 203, 411, 1637, 1834, 1948
MmeI TCCRAC 1 cut(s) 1127
MroXI GAANNNNTTC 1 cut(s) 1334
MseI TTAA 3 cut(s) 789, 1233, 1367
MslI CAYNNNNRTG 4 cut(s) 1011, 1097, 1214, 1317
MspR9I CCNGG 7 cut(s) 74, 191, 317, 367, 513, 581, 1862
MunI CAATTG 1 cut(s) 1698
Mva1269I GAATGC 2 cut(s) 541, 1141
MvaI CCWGG 3 cut(s) 367, 513, 1862
MvnI CGCG 6 cut(s) 120, 180, 185, 225, 707, 2004
MwoI GCNNNNNNNGC 4 cut(s) 854, 863, 874, 1003
NciI CCSGG 4 cut(s) 74, 191, 317, 581
NdeII GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
NlaIII CATG 7 cut(s) 460, 1010, 1096, 1316, 1462, 1619, 1709
NlaIV GGNNCC 2 cut(s) 578, 673
NmeAIII GCCGAG 1 cut(s) 656
NmuCI GTSAC 7 cut(s) 141, 195, 369, 1088, 1246, 1880, 1951
NsbI TGCGCA 1 cut(s) 867
NspI RCATGY 2 cut(s) 460, 1010
NspV TTCGAA 1 cut(s) 171
PaeI GCATGC 1 cut(s) 1010
PciI ACATGT 1 cut(s) 456
PcsI WCGNNNNNNNCGW 3 cut(s) 177, 426, 536
PctI GAATGC 2 cut(s) 541, 1141
PdmI GAANNNNTTC 1 cut(s) 1334
PfeI GAWTC 6 cut(s) 249, 286, 391, 1309, 1466, 1544
PflFI GACNNNGTC 1 cut(s) 1646
PfoI TCCNGGA 1 cut(s) 189
PkrI GCNGC 9 cut(s) 149, 256, 428, 879, 897, 1174, 1221, 1696, 2003
PleI GAGTC 5 cut(s) 202, 411, 1637, 1834, 1948
PmaCI CACGTG 1 cut(s) 531
PmlI CACGTG 1 cut(s) 531
PpsI GAGTC 5 cut(s) 202, 411, 1637, 1834, 1948
Ppu21I YACGTR 2 cut(s) 531, 1449
PscI ACATGT 1 cut(s) 456
Psp124BI GAGCTC 1 cut(s) 2039
Psp6I CCWGG 3 cut(s) 365, 511, 1860
PspCI CACGTG 1 cut(s) 531
PspFI CCCAGC 1 cut(s) 1784
PspGI CCWGG 3 cut(s) 365, 511, 1860
PspN4I GGNNCC 2 cut(s) 578, 673
PstNI CAGNNNCTG 1 cut(s) 1547
PsuI RGATCY 1 cut(s) 1826
PsyI GACNNNGTC 1 cut(s) 1646
RsaI GTAC 5 cut(s) 401, 461, 527, 578, 1379
RsaNI GTAC 5 cut(s) 400, 460, 526, 577, 1378
RseI CAYNNNNRTG 4 cut(s) 1011, 1097, 1214, 1317
SacI GAGCTC 1 cut(s) 2039
SaqAI TTAA 3 cut(s) 789, 1233, 1367
SatI GCNGC 9 cut(s) 148, 255, 427, 878, 896, 1173, 1220, 1695, 2002
Sau3AI GATC 7 cut(s) 408, 502, 654, 1702, 1816, 1826, 1994
SchI GAGTC 5 cut(s) 203, 411, 1637, 1834, 1948
ScrFI CCNGG 7 cut(s) 74, 191, 317, 367, 513, 581, 1862
SduI GDGCHC 2 cut(s) 1501, 2039
SexAI ACCWGGT 1 cut(s) 365
SfaNI GCATC 3 cut(s) 321, 475, 1206
SfuI TTCGAA 1 cut(s) 171
SmiMI CAYNNNNRTG 4 cut(s) 1011, 1097, 1214, 1317
SmlI CTYRAG 1 cut(s) 1956
SmoI CTYRAG 1 cut(s) 1956
SphI GCATGC 1 cut(s) 1010
SspMI CTAG 1 cut(s) 1490
SstI GAGCTC 1 cut(s) 2039
StyD4I CCNGG 7 cut(s) 72, 189, 315, 365, 511, 579, 1860
TaaI ACNGT 2 cut(s) 556, 1252
TaiI ACGT 4 cut(s) 533, 588, 599, 1451
TaqI TCGA 7 cut(s) 171, 375, 420, 647, 1476, 1722, 1993
TaqII GACCGA 2 cut(s) 1195, 1899
TatI WGTACW 4 cut(s) 399, 459, 525, 1377
TauI GCSGC 3 cut(s) 150, 257, 2004
TfiI GAWTC 6 cut(s) 249, 286, 391, 1309, 1466, 1544
Tru1I TTAA 3 cut(s) 789, 1233, 1367
Tru9I TTAA 3 cut(s) 789, 1233, 1367
TscAI CASTG 1 cut(s) 1264
TseFI GTSAC 7 cut(s) 141, 195, 369, 1088, 1246, 1880, 1951
TseI GCWGC 6 cut(s) 426, 877, 895, 1172, 1219, 1694
Tsp45I GTSAC 7 cut(s) 141, 195, 369, 1088, 1246, 1880, 1951
TspDTI ATGAA 2 cut(s) 644, 1301
TspGWI ACGGA 3 cut(s) 429, 1636, 1768
TspRI CASTG 1 cut(s) 1264
Tth111I GACNNNGTC 1 cut(s) 1646
XapI RAATTY 4 cut(s) 61, 934, 1591, 1636
XbaI TCTAGA 1 cut(s) 1489
XceI RCATGY 2 cut(s) 460, 1010
XmiI GTMKAC 1 cut(s) 231
XmnI GAANNNNTTC 1 cut(s) 1334
XspI CTAG 1 cut(s) 1490
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.