Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0010286

Physical Location & Seq

Genomic Coordinates Forward (+)

7463524 .. 7465569

Gene Structure 2046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g08080.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1974 bp

ATGGAAGCTGTAACAGTAACCTCACCGCCTCTCTCTTTGCACCACCACTGCTTCCCGCCAAGCACACGCATCGCCGCCGCCAACTCTAATGACTGTAATAAACACCGCCAAACCTTCAAGCGGAAAGCTTTATCATCACGGCGGAAACAAACGACTCCGACATTCGAGGAACACCACGCGTTTCCGGACTCCTTGCCGCTCCACACGAAGAACCCACATGTCATTTACAAGGACATACAGAGCTTCGCAAGGAGAAATAAGATCGAGAAGGCCCTGAGTATCTTGGACTACTTGGACCAGCAGGGCATCCCGGTTAACGCCACCACATTCTCCGCCCTCATCGCCGCTTGTGTCCGTACAAGGTCGTTGGATCACGGCAAGCAAATCCACACGCATATTCGGATTAACGGGCTCGAAAACAATGACTTTATACGCACAAAGTTGGTAAATATGTACACTAGTTTTGGGTCAGTGGATGATGCACAGAAGCTGTTTGATGAAAGTTCTAGCAAGAACGTGTACTCGTGGAATGCCTTGCTTAGAGGCACTGTCATTGCTGGTGGGAAGCGGTACGGTGATGTTCTTGATACTTATTCGGAAATGCGGGTGTTAGGGGTGGAGTTGAATGTGTATAGTTTCTCTAGTGTGATTAAGAGCTTTGCAGGTGCTTCGGCACTGTCGCAAGGTTTGAAGACGCATGCCCTTTTGGTTAAGAACGGTTTCATTGATAGCGCGATTGTTCGAACGAGTTTGGTTGTTGCATGGGGAGCCATGATTGCAGGTTTTGCGCATAATAGGAGGCAAGGGGAAGCTTTGGAGTATGTTAGGATGATGGTAGATGAAGGAGTAAGGCTGAATTCAGTTATATTGACTAGTATTCTTCCTGTGATTGGGGACGTTGGGGCTCGAAAGCTAGGGCAGGAGCTTCATGCTTTTGTGGTGAAGACAAAAAGCTATTCCAAGCAGATTTTCATTCAGTCTGGCTTGATAGACATGTATTGCAAGTGTGGAGATATGGATATGGGGCGGCGGGTTTTTTATCATTCGAAGGAGAGGAATACAATTTGTTGGACTGCTTTGATGTCAGGTTATGTTGCAAATGGGAGGCCTGAGCAGGCATTGCGATCGATCATTTGGATGCAGCAGGAAGGGTTTAAGCCAGATTTGGTCACGATTGCCACCATCCTTCCAGTTTGTGCAGAATTGAAGGATTTGAAACGAGGGAAGGAGATACATGCGTATGCTGTGAAAAATTGTTTCTTGCCCAATGTATCTATAATTTCTTCTTTGATGGTGATGTACTCGAAGTGTGGCATCTTTGAGTACTCCGTAAGACTATTCGATGGGATGGAGAACAGAAATATTATTCTTTGGACGGCCATGATTGATTCCTATATTGACAACGGATGCCTCTACGAGGCACTTGGTCTGGTAAGGTCAATGGTCTTATCGAAGCACAGGCCAGATTCCGTTGCAATGGCAAGGATTTTGAACATTTGCAATGGCCTAAAGAATTTGAAGCTTGGGAAGGAAATTCATGGACAAGCTTTGAAGAAGAACTTTGAATCCATTCCTTTTGTTACTGCTGAAATTGTGAAAATGTATGGGCAATGTGGAGCCGTTGATCATGCAAAGTCTGTTTTCGATGCAATCCCTGTCAAGGGTTCAATGACTTGGACTGCAATCATAGAGGCTTATGCATACAATGACATGTATCAAGAAGCTATCAATCTGTTCGATCAGATGAGATCTAAAGACTTCACTCCGAACCATTTCACTTTCCAGGTGGTTCTATCTATTTGCTATCGAGCTGGATTTGTTGATGATGCTTGCCGTATCTTCCATTTAATGTCTCATGTGTACAAAGTTAAGGTGTCTGAGGAACAATATTCTCTAATCATTGGACTGATCGATCGTTTTGGCCGCATTGAGGAGGCTCGAAGATTTACAACATTGAGTTCGTCTCTGTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 Pkinase

Protein Analysis

658

Amino Acids

73.89

Weight (kDa)

9.14

Isoelectric Point (pI)

41.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	353 - 400	7e-09	PPR repeat family
PPR_2	PF13041	556 - 601	3.1e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71460
fragaria_vesca	FvH4_7g09420 FvH4_7g09420 FvH4_7g09420
malus_domestica	MD07G1098200.v1.1
prunus_persica	Prupe.2G122200_v2.0.a1
pyrus_communis	pycom07g08080 pycom12652g00070 pycom12652g00080
rosa_chinensis	RchiOBHm_Chr1g0346071
rosa_laevigata	RLG00000028816
rosa_multiflora	Rmu_sc0009190.1_g000001 Rmu_ssc0000255.1_g000072
rosa_roxburghii	Rroxscaffold_4G00308840
rosa_rugosa	Rorug01G0177800
rosa_samantha	Rh1AG197300 Rh1BG162500 Rh1CG182300 Rh1DG193000
rosa_wichuraiana	Rw1G016350 Rw1G016560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	653
Acc16I	TGCGCA	1 cut(s)	789
Acc36I	ACCTGC	2 cut(s)	653, 770
AccBSI	CCGCTC	1 cut(s)	199
AccII	CGCG	2 cut(s)	179, 734
AccIII	TCCGGA	1 cut(s)	184
AclWI	GGATC	1 cut(s)	378
AcoI	YGGCCR	2 cut(s)	1377, 1921
AcsI	RAATTY	3 cut(s)	856, 1513, 1533
AfaI	GTAC	7 cut(s)	358, 455, 521, 572, 1301, 1325, 1862
AfiI	CCNNNNNNNGG	6 cut(s)	120, 890, 1417, 1660, 1661, 1930
AflIII	ACRYGT	5 cut(s)	177, 217, 516, 993, 1710
AhlI	ACTAGT	2 cut(s)	458, 872
AjnI	CCWGG	1 cut(s)	1782
AjuI	GAANNNNNNNTTGG	2 cut(s)	953, 985
AloI	GAACNNNNNNTCC	2 cut(s)	1550, 1582
Alw26I	GTCTC	2 cut(s)	1857, 1968
AlwI	GGATC	1 cut(s)	378
AlwNI	CAGNNNCTG	1 cut(s)	490
Aor13HI	TCCGGA	1 cut(s)	184
AoxI	GGCC	6 cut(s)	270, 1106, 1377, 1460, 1504, 1921
ApeKI	GCWGC	1 cut(s)	1141
ApoI	RAATTY	3 cut(s)	856, 1513, 1533
Asp700I	GAANNNNTTC	3 cut(s)	719, 1569, 1772
AspLEI	GCGC	2 cut(s)	734, 790
AspS9I	GGNCC	2 cut(s)	271, 295
AsuC2I	CCSGG	1 cut(s)	311
AsuHPI	GGTGA	4 cut(s)	15, 587, 952, 1306
AsuII	TTCGAA	2 cut(s)	742, 1046
AvaII	GGWCC	1 cut(s)	295
BaeI	ACNNNNGTAYC	2 cut(s)	1223, 1256
BanII	GRGCYC	2 cut(s)	414, 907
BauI	CACGAG	1 cut(s)	523
BbsI	GAAGAC	2 cut(s)	698, 950
BbvI	GCAGC	1 cut(s)	1153
BccI	CCATC	5 cut(s)	826, 1190, 1285, 1337, 1342
BceAI	ACGGC	5 cut(s)	155, 391, 1392, 1604, 1818
BcgI	CGANNNNNNTGC	6 cut(s)	52, 86, 651, 685, 1107, 1141
BciT130I	CCWGG	1 cut(s)	1784
BclI	TGATCA	1 cut(s)	1624
BcnI	CCSGG	1 cut(s)	311
BcoDI	GTCTC	2 cut(s)	1857, 1968
BcuI	ACTAGT	2 cut(s)	458, 872
BfaI	CTAG	5 cut(s)	459, 507, 642, 873, 914
BfuAI	ACCTGC	2 cut(s)	653, 770
BglII	AGATCT	1 cut(s)	1748
BisI	GCNGC	7 cut(s)	75, 78, 197, 345, 1028, 1142, 1924
BlsI	GCNGC	7 cut(s)	76, 79, 198, 346, 1029, 1143, 1925
BmcAI	AGTACT	1 cut(s)	1325
Bme1390I	CCNGG	2 cut(s)	311, 1784
Bme18I	GGWCC	1 cut(s)	295
BmgT120I	GGNCC	2 cut(s)	271, 295
BmiI	GGNNCC	2 cut(s)	769, 1618
BmrFI	CCNGG	2 cut(s)	311, 1784
BmsI	GCATC	8 cut(s)	78, 315, 469, 1128, 1323, 1397, 1636, 1816
BpiI	GAAGAC	2 cut(s)	698, 950
BplI	GAGNNNNNCTC	1 cut(s)	1948
Bpu10I	CCTNAGC	1 cut(s)	1110
Bpu14I	TTCGAA	2 cut(s)	742, 1046
BpuMI	CCSGG	1 cut(s)	311
Bsa29I	ATCGAT	2 cut(s)	1127, 1911
BsaWI	WCCGGW	1 cut(s)	184
Bsc4I	CCNNNNNNNGG	6 cut(s)	120, 890, 1417, 1660, 1661, 1930
Bse1I	ACTGG	1 cut(s)	1190
Bse3DI	GCAATG	5 cut(s)	552, 1118, 1482, 1507, 1616
BseAI	TCCGGA	1 cut(s)	184
BseBI	CCWGG	1 cut(s)	1784
BseCI	ATCGAT	2 cut(s)	1127, 1911
BseGI	GGATG	7 cut(s)	306, 481, 834, 1143, 1182, 1353, 1412
BseLI	CCNNNNNNNGG	6 cut(s)	120, 890, 1417, 1660, 1661, 1930
BseMI	GCAATG	5 cut(s)	552, 1118, 1482, 1507, 1616
BseMII	CTCAG	3 cut(s)	266, 1101, 1869
BseNI	ACTGG	1 cut(s)	1190
BseRI	GAGGAG	1 cut(s)	1946
BseXI	GCAGC	1 cut(s)	1153
BsgI	GTGCAG	1 cut(s)	1218
Bsh1236I	CGCG	2 cut(s)	179, 734
Bsh1285I	CGRYCG	2 cut(s)	1127, 1915
BshFI	GGCC	6 cut(s)	272, 1108, 1379, 1462, 1506, 1923
BshVI	ATCGAT	2 cut(s)	1127, 1911
BsiEI	CGRYCG	2 cut(s)	1127, 1915
BsiSI	CCGG	2 cut(s)	185, 311
BslFI	GGGAC	1 cut(s)	908
BslI	CCNNNNNNNGG	6 cut(s)	120, 890, 1417, 1660, 1661, 1930
BsmAI	GTCTC	2 cut(s)	1857, 1968
BsmBI	CGTCTC	1 cut(s)	1968
BsmFI	GGGAC	1 cut(s)	908
BsmI	GAATGC	1 cut(s)	535
BsnI	GGCC	6 cut(s)	272, 1108, 1379, 1462, 1506, 1923
Bsp119I	TTCGAA	2 cut(s)	742, 1046
Bsp1286I	GDGCHC	2 cut(s)	414, 907
Bsp13I	TCCGGA	1 cut(s)	184
Bsp1407I	TGTACA	2 cut(s)	453, 1860
Bsp143I	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
BspANI	GGCC	6 cut(s)	272, 1108, 1379, 1462, 1506, 1923
BspCNI	CTCAG	3 cut(s)	267, 1102, 1870
BspDI	ATCGAT	2 cut(s)	1127, 1911
BspEI	TCCGGA	1 cut(s)	184
BspFNI	CGCG	2 cut(s)	179, 734
BspLI	GGNNCC	2 cut(s)	769, 1618
BspMI	ACCTGC	2 cut(s)	653, 770
BspPI	GGATC	1 cut(s)	378
BspT104I	TTCGAA	2 cut(s)	742, 1046
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	5 cut(s)	552, 1118, 1482, 1507, 1616
BsrGI	TGTACA	2 cut(s)	453, 1860
BsrI	ACTGG	1 cut(s)	1190
BssMI	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
BssSI	CACGAG	1 cut(s)	523
Bst2BI	CACGAG	1 cut(s)	523
Bst2UI	CCWGG	1 cut(s)	1784
Bst4CI	ACNGT	6 cut(s)	16, 95, 550, 575, 678, 719
BstAPI	GCANNNNNTGC	2 cut(s)	785, 1120
BstAUI	TGTACA	2 cut(s)	453, 1860
BstBI	TTCGAA	2 cut(s)	742, 1046
BstC8I	GCNNGC	4 cut(s)	380, 699, 1116, 1831
BstDEI	CTNAG	4 cut(s)	275, 539, 1110, 1878
BstENI	CCTNNNNNAGG	1 cut(s)	1415
BstF5I	GGATG	7 cut(s)	306, 481, 834, 1143, 1182, 1353, 1412
BstFNI	CGCG	2 cut(s)	179, 734
BstHHI	GCGC	2 cut(s)	734, 790
BstKTI	GATC	9 cut(s)	264, 373, 1127, 1131, 1627, 1741, 1751, 1911, 1915
BstMAI	GTCTC	2 cut(s)	1857, 1968
BstMBI	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
BstMCI	CGRYCG	2 cut(s)	1127, 1915
BstMWI	GCNNNNNNNGC	5 cut(s)	341, 767, 776, 785, 1120
BstNI	CCWGG	1 cut(s)	1784
BstNSI	RCATGY	5 cut(s)	221, 701, 997, 1238, 1714
BstSCI	CCNGG	2 cut(s)	309, 1782
BstUI	CGCG	2 cut(s)	179, 734
BstV1I	GCAGC	1 cut(s)	1153
BstV2I	GAAGAC	2 cut(s)	698, 950
BstX2I	RGATCY	1 cut(s)	1748
BstYI	RGATCY	1 cut(s)	1748
Bsu15I	ATCGAT	2 cut(s)	1127, 1911
BsuRI	GGCC	6 cut(s)	272, 1108, 1379, 1462, 1506, 1923
BsuTUI	ATCGAT	2 cut(s)	1127, 1911
BtgZI	GCGATG	2 cut(s)	55, 325
BtsCI	GGATG	7 cut(s)	306, 481, 834, 1143, 1182, 1353, 1412
BtsI	GCAGTG	1 cut(s)	46
BtsIMutI	CAGTG	4 cut(s)	46, 477, 546, 674
BveI	ACCTGC	2 cut(s)	653, 770
Cac8I	GCNNGC	4 cut(s)	380, 699, 1116, 1831
CaiI	CAGNNNCTG	1 cut(s)	490
CfoI	GCGC	2 cut(s)	734, 790
Cfr13I	GGNCC	2 cut(s)	271, 295
ClaI	ATCGAT	2 cut(s)	1127, 1911
CseI	GACGC	1 cut(s)	703
Csp6I	GTAC	7 cut(s)	357, 454, 520, 571, 1300, 1324, 1861
CviQI	GTAC	7 cut(s)	357, 454, 520, 571, 1300, 1324, 1861
DdeI	CTNAG	4 cut(s)	275, 539, 1110, 1878
DpnI	GATC	9 cut(s)	263, 372, 1126, 1130, 1626, 1740, 1750, 1910, 1914
DpnII	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
EaeI	YGGCCR	2 cut(s)	1377, 1921
EciI	GGCGGA	2 cut(s)	157, 322
Eco147I	AGGCCT	1 cut(s)	1108
Eco24I	GRGCYC	2 cut(s)	414, 907
Eco47I	GGWCC	1 cut(s)	295
EcoNI	CCTNNNNNAGG	1 cut(s)	1415
EcoO109I	RGGNCCY	1 cut(s)	271
EcoRI	GAATTC	1 cut(s)	856
EcoRII	CCWGG	1 cut(s)	1782
EcoT22I	ATGCAT	1 cut(s)	1702
EcoT38I	GRGCYC	2 cut(s)	414, 907
Esp3I	CGTCTC	1 cut(s)	1968
FalI	AAGNNNNNCTT	2 cut(s)	1544, 1576
FaqI	GGGAC	1 cut(s)	908
FauI	CCCGC	3 cut(s)	63, 597, 1023
FbaI	TGATCA	1 cut(s)	1624
Fnu4HI	GCNGC	7 cut(s)	75, 78, 197, 345, 1028, 1142, 1924
FokI	GGATG	7 cut(s)	293, 488, 841, 1150, 1169, 1360, 1419
FriOI	GRGCYC	2 cut(s)	414, 907
Fsp4HI	GCNGC	7 cut(s)	75, 78, 197, 345, 1028, 1142, 1924
FspBI	CTAG	5 cut(s)	459, 507, 642, 873, 914
FspI	TGCGCA	1 cut(s)	789
GlaI	GCGC	2 cut(s)	733, 789
GluI	GCNGC	7 cut(s)	75, 78, 197, 345, 1028, 1142, 1924
HaeIII	GGCC	6 cut(s)	272, 1108, 1379, 1462, 1506, 1923
HapII	CCGG	2 cut(s)	185, 311
HgaI	GACGC	1 cut(s)	703
HhaI	GCGC	2 cut(s)	734, 790
Hin6I	GCGC	2 cut(s)	732, 788
HinP1I	GCGC	2 cut(s)	732, 788
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HindIII	AAGCTT	4 cut(s)	126, 810, 1520, 1545
HinfI	GANTC	5 cut(s)	154, 188, 1388, 1466, 1565
HpaI	GTTAAC	1 cut(s)	316
HpaII	CCGG	2 cut(s)	185, 311
HphI	GGTGA	4 cut(s)	15, 587, 952, 1306
Hpy166II	GTNNAC	4 cut(s)	316, 456, 520, 1861
Hpy188I	TCNGA	6 cut(s)	159, 402, 598, 1743, 1767, 1879
Hpy188III	TCNNGA	5 cut(s)	185, 265, 584, 1171, 1718
Hpy8I	GTNNAC	4 cut(s)	316, 456, 520, 1861
HpyAV	CCTTC	9 cut(s)	124, 262, 836, 1042, 1142, 1196, 1201, 1219, 1522
HpyCH4III	ACNGT	6 cut(s)	16, 95, 550, 575, 678, 719
HpyCH4IV	ACGT	2 cut(s)	516, 897
HpyF10VI	GCNNNNNNNGC	5 cut(s)	341, 767, 776, 785, 1120
HpyF3I	CTNAG	4 cut(s)	275, 539, 1110, 1878
HpySE526I	ACGT	2 cut(s)	516, 897
HspAI	GCGC	2 cut(s)	732, 788
Kpn2I	TCCGGA	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	1624
KspAI	GTTAAC	1 cut(s)	316
Kzo9I	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
LmnI	GCTCC	4 cut(s)	204, 767, 922, 1616
Lsp1109I	GCAGC	1 cut(s)	1153
LweI	GCATC	8 cut(s)	78, 315, 469, 1128, 1323, 1397, 1636, 1816
MaeI	CTAG	5 cut(s)	459, 507, 642, 873, 914
MaeII	ACGT	2 cut(s)	516, 897
MaeIII	GTNAC	4 cut(s)	10, 16, 1168, 1579
MalI	GATC	9 cut(s)	263, 372, 1126, 1130, 1626, 1740, 1750, 1910, 1914
MbiI	CCGCTC	1 cut(s)	199
MboI	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
MboII	GAAGA	9 cut(s)	220, 703, 872, 955, 1275, 1564, 1567, 1831, 1953
MflI	RGATCY	1 cut(s)	1748
MhlI	GDGCHC	2 cut(s)	414, 907
MluCI	AATT	8 cut(s)	856, 1062, 1202, 1252, 1278, 1513, 1533, 1590
MluI	ACGCGT	1 cut(s)	177
MlyI	GAGTC	2 cut(s)	148, 182
MmeI	TCCRAC	3 cut(s)	182, 348, 1049
Mph1103I	ATGCAT	1 cut(s)	1702
MroI	TCCGGA	1 cut(s)	184
MroXI	GAANNNNTTC	3 cut(s)	719, 1569, 1772
MseI	TTAA	7 cut(s)	315, 405, 651, 711, 1155, 1847, 1869
MslI	CAYNNNNRTG	2 cut(s)	1136, 1239
MspI	CCGG	2 cut(s)	185, 311
MspR9I	CCNGG	2 cut(s)	311, 1784
Mva1269I	GAATGC	1 cut(s)	535
MvaI	CCWGG	1 cut(s)	1784
MvnI	CGCG	2 cut(s)	179, 734
MwoI	GCNNNNNNNGC	5 cut(s)	341, 767, 776, 785, 1120
NciI	CCSGG	1 cut(s)	311
NdeII	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
NlaIV	GGNNCC	2 cut(s)	769, 1618
NmuCI	GTSAC	1 cut(s)	1168
NsbI	TGCGCA	1 cut(s)	789
NsiI	ATGCAT	1 cut(s)	1702
NspI	RCATGY	5 cut(s)	221, 701, 997, 1238, 1714
NspV	TTCGAA	2 cut(s)	742, 1046
PaeI	GCATGC	1 cut(s)	701
PaqCI	CACCTGC	1 cut(s)	653
PceI	AGGCCT	1 cut(s)	1108
PciI	ACATGT	3 cut(s)	217, 993, 1710
PctI	GAATGC	1 cut(s)	535
PdmI	GAANNNNTTC	3 cut(s)	719, 1569, 1772
PfeI	GAWTC	3 cut(s)	1388, 1466, 1565
PkrI	GCNGC	7 cut(s)	76, 79, 198, 346, 1029, 1143, 1925
Ple19I	CGATCG	2 cut(s)	1127, 1915
PleI	GAGTC	2 cut(s)	148, 182
PpsI	GAGTC	2 cut(s)	148, 182
PscI	ACATGT	3 cut(s)	217, 993, 1710
Psp6I	CCWGG	1 cut(s)	1782
PspGI	CCWGG	1 cut(s)	1782
PspN4I	GGNNCC	2 cut(s)	769, 1618
PspPI	GGNCC	2 cut(s)	271, 295
PstNI	CAGNNNCTG	1 cut(s)	490
PsuI	RGATCY	1 cut(s)	1748
PvuI	CGATCG	2 cut(s)	1127, 1915
RsaI	GTAC	7 cut(s)	358, 455, 521, 572, 1301, 1325, 1862
RsaNI	GTAC	7 cut(s)	357, 454, 520, 571, 1300, 1324, 1861
RseI	CAYNNNNRTG	2 cut(s)	1136, 1239
SaqAI	TTAA	7 cut(s)	315, 405, 651, 711, 1155, 1847, 1869
SatI	GCNGC	7 cut(s)	75, 78, 197, 345, 1028, 1142, 1924
Sau3AI	GATC	9 cut(s)	261, 370, 1124, 1128, 1624, 1738, 1748, 1908, 1912
Sau96I	GGNCC	2 cut(s)	271, 295
ScaI	AGTACT	1 cut(s)	1325
SchI	GAGTC	2 cut(s)	148, 182
ScrFI	CCNGG	2 cut(s)	311, 1784
SduI	GDGCHC	2 cut(s)	414, 907
SfaNI	GCATC	8 cut(s)	78, 315, 469, 1128, 1323, 1397, 1636, 1816
SfuI	TTCGAA	2 cut(s)	742, 1046
SinI	GGWCC	1 cut(s)	295
SmiMI	CAYNNNNRTG	2 cut(s)	1136, 1239
SpeI	ACTAGT	2 cut(s)	458, 872
SphI	GCATGC	1 cut(s)	701
Sse9I	AATT	8 cut(s)	856, 1062, 1202, 1252, 1278, 1513, 1533, 1590
SseBI	AGGCCT	1 cut(s)	1108
SspI	AATATT	2 cut(s)	1363, 1889
SspMI	CTAG	5 cut(s)	459, 507, 642, 873, 914
StuI	AGGCCT	1 cut(s)	1108
StyD4I	CCNGG	2 cut(s)	309, 1782
TaaI	ACNGT	6 cut(s)	16, 95, 550, 575, 678, 719
TaiI	ACGT	2 cut(s)	519, 900
TasI	AATT	8 cut(s)	856, 1062, 1202, 1252, 1278, 1513, 1533, 1590
TatI	WGTACW	5 cut(s)	453, 519, 1299, 1323, 1860
TauI	GCSGC	6 cut(s)	77, 80, 199, 347, 1030, 1926
TfiI	GAWTC	3 cut(s)	1388, 1466, 1565
Tru1I	TTAA	7 cut(s)	315, 405, 651, 711, 1155, 1847, 1869
Tru9I	TTAA	7 cut(s)	315, 405, 651, 711, 1155, 1847, 1869
TscAI	CASTG	4 cut(s)	53, 477, 553, 681
TseFI	GTSAC	1 cut(s)	1168
TseI	GCWGC	1 cut(s)	1141
Tsp45I	GTSAC	1 cut(s)	1168
TspDTI	ATGAA	6 cut(s)	513, 712, 855, 917, 961, 1526
TspGWI	ACGGA	4 cut(s)	344, 1318, 1419, 1459
TspRI	CASTG	4 cut(s)	53, 477, 553, 681
VpaK11BI	GGWCC	1 cut(s)	295
XagI	CCTNNNNNAGG	1 cut(s)	1415
XapI	RAATTY	3 cut(s)	856, 1513, 1533
XceI	RCATGY	5 cut(s)	221, 701, 997, 1238, 1714
XmnI	GAANNNNTTC	3 cut(s)	719, 1569, 1772
XspI	CTAG	5 cut(s)	459, 507, 642, 873, 914
ZrmI	AGTACT	1 cut(s)	1325
Zsp2I	ATGCAT	1 cut(s)	1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.