Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0010286

Physical Location & Seq

Genomic Coordinates Forward (+)

38239145 .. 38241229

Gene Structure 2085 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57236

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2040 bp

ATGGAAGGTTTATCAGTAGCCTCACCAAGTCTCTCTCTGCAAATCCACTCCTTCCCGCCAAAAACTCGCTTCACCGCCACCGGCGGTGACAACCCTAACAACCACCACGCCTTCAAGCTCCACGCTTTATCACGACGACGCCGAAAACCTCCGAAATTCGAAGAAAACGACGCGTTTCCGGACTCGTTACCGCTCCACACGAAGAACCCACACGCCGTTTACAAGGACATACAAAGATTCGCGAGGCAGAACAAGCTCAACGAGTCCCTGGCGATTCTGGACTACTTGGACCAAAACGGCATCCCCGTCAACGCCACCACATTCTCCCACCTCATCACCGCCTGCGTCCGCACGAGGTCGTTGGACACCGGCAAGAAGATCCACACCTATATTCGGATCAATGGACTCGAAACCAACGAGTTTCTGCGCCGGAAATTGGTGAACATGTACACGAGTTTCGGGTCGGTCGATGATGCACACAACTTGTTCGATGATATGTCTAGCAAGAACGTGTACTCGTGGAACGCGTTGCTTAGAGGGACTGTGGTTGCGGGTGGGAAGCGGTACCGTGATGTTCTCGAGACGTATTCGGAAATGAGGGGGTTGGGGGTGGAGATGAATGTGTATAGTTTCTCTAATGTGATCAAGAGCTTTGCGGGCGCTTCGGCTCTTTCGCAAGGTTTGAGGACGCATGGGCTGTTGGTGAAGAATGGTTTCGTTGATAGTGTGATTGTTGGGACGAGTTTGATTGATATGTACTTCAAATGTGGCAAGATTAAGCTTGCGCGCCAAGTGTTTGAGGAGATGGGTGAGAGGGATGTGGTTTTGTGGGGAGCTATGATTGCAGGTTTTGCGCATAATAGGTTGTACAAGGAAGCTTTGGAGCATTTGAGGATGATGGTGGATGAAGGGATAAGGCCGAATTCGGTTATATTGACTAGTATTCTTCCTGTGATTGGGGAAGTTTCGGCACGAAAGCTTGGGCAGGAAGCGCATGCTTATGTGCTGAAGACAAAGAGTTATTTGAAGCAGGCATTTGTTCAGTCTGCTTTGATAGATATGTATTGCAAATGCGGTGACATGGAGATGGGAAGACGGGTGTTTTATAGTTCAGTGGAGAGGAATGCAATTTGTTGGACTGCTTTGATGTCGGGTTACGCTGCAAATGGGAGGCTTGAGCAGGCATTGAGGTCAGTCATTTGGATGCAGCAGGAAGGGTTTAAGCCGGATGTTGTGACGGTTGCCACTGCCCTTCCAGTTTGTGCAGAGTTGAAGGATTTGAAACGAGGGAAGGAGATTCATGCTTATGCTGTGAAGAATTGCTTCTTGCCCAATGTATCTATTATTTCTTCTTTAATGGTCATGTACTCTAAGTGTGGCGTCTTGGAGTATTCTATAAGATTATTTGATGGTATGGAGCAGAGAAATGTTATTACGTGGACAGCCATGATAGATTCCCATGTCGAAAATGGGTACCTAGATGAGGCACTTGGTGTCATAAGGTCAATGCTTTTGTCAAAGCACAGGCCAGATTCGGTTGCAATGTCAAGGATGTTGGCTATTTGCGGGGGACTAAAGAATTTGAAGCTTGGGAAGGAAATCCATGCACAAGTTTTGAAAAAGAATTTTGAGTCTGTCCATTTTGTTTCTGCTGAACTAGTGAAAATGTATGGGCACTGTGGAGCAATTGATCATGCGAAGTCATTTTTCGATACAATTCCAGTCAAGGGTTCAATGACATGGACTGCAATTATAGAAGCTTATGGATATGCTGGCATGTATCAAGAAGCTATTAGTCTTTTTGATCAGATGAGATCTAATGACTTCACTCCGAACAATTTCACTTTCCAAGTGGTTCTATCTATTTGTGACCGAGCTGAATTTGTTGATGATGCTTGCCGTATCTTCCATTTGATGTCTCGTACATATAAAACCAGGGTATCTCAAGAACAGTACTCTCTACTCATTGCACTTCTTACTCGATCTGGCCGCATTGAGGAAGCTCAGAGATTTATACAAATGAGCTCATCTTTAGTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 Pkinase

Protein Analysis

679

Amino Acids

76.45

Weight (kDa)

9.06

Isoelectric Point (pI)

37.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	375 - 418	1.5e-08	PPR repeat family
PPR_2	PF13041	475 - 519	5e-06	PPR repeat family
PPR_2	PF13041	578 - 621	3.2e-10	PPR repeat family
PPR	PF01535	580 - 608	1.6e-06	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71460
fragaria_vesca	FvH4_7g09420 FvH4_7g09420 FvH4_7g09420
malus_domestica	MD07G1098200.v1.1
prunus_persica	Prupe.2G122200_v2.0.a1
pyrus_communis	pycom07g08080 pycom12652g00070 pycom12652g00080
rosa_chinensis	RchiOBHm_Chr1g0346071
rosa_laevigata	RLG00000028816
rosa_multiflora	Rmu_sc0009190.1_g000001 Rmu_ssc0000255.1_g000072
rosa_roxburghii	Rroxscaffold_4G00308840
rosa_rugosa	Rorug01G0177800
rosa_samantha	Rh1AG197300 Rh1BG162500 Rh1CG182300 Rh1DG193000
rosa_wichuraiana	Rw1G016350 Rw1G016560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	855
Acc36I	ACCTGC	1 cut(s)	836
Acc65I	GGTACC	2 cut(s)	564, 1473
AccB1I	GGYRCC	2 cut(s)	564, 1473
AccBSI	CCGCTC	1 cut(s)	193
AccII	CGCG	4 cut(s)	173, 242, 527, 787
AccIII	TCCGGA	1 cut(s)	178
AclWI	GGATC	2 cut(s)	373, 404
AcoI	YGGCCR	1 cut(s)	1987
AcsI	RAATTY	5 cut(s)	155, 922, 1579, 1624, 1880
AcuI	CTGAAG	1 cut(s)	1028
AcyI	GRCGYC	2 cut(s)	139, 1380
AdeI	CACNNNGTG	1 cut(s)	1493
AfaI	GTAC	9 cut(s)	449, 515, 566, 758, 869, 1367, 1475, 1924, 1955
AfiI	CCNNNNNNNGG	6 cut(s)	393, 436, 956, 1483, 1727, 1996
AflIII	ACRYGT	4 cut(s)	171, 444, 510, 525
AgsI	TTSAA	8 cut(s)	115, 763, 1027, 1273, 1282, 1585, 1618, 1734
AhlI	ACTAGT	2 cut(s)	938, 1657
AjnI	CCWGG	2 cut(s)	267, 1934
Alw21I	GWGCWC	1 cut(s)	2027
Alw26I	GTCTC	3 cut(s)	35, 575, 1923
AlwI	GGATC	2 cut(s)	373, 404
Ama87I	CYCGRG	1 cut(s)	578
Aor13HI	TCCGGA	1 cut(s)	178
AoxI	GGCC	3 cut(s)	917, 1526, 1987
ApeKI	GCWGC	2 cut(s)	1160, 1207
ApoI	RAATTY	5 cut(s)	155, 922, 1579, 1624, 1880
Asp700I	GAANNNNTTC	3 cut(s)	713, 1322, 1838
Asp718I	GGTACC	2 cut(s)	564, 1473
AspLEI	GCGC	6 cut(s)	429, 662, 787, 789, 856, 994
AspS9I	GGNCC	1 cut(s)	289
AsuHPI	GGTGA	8 cut(s)	15, 64, 98, 328, 451, 715, 821, 1088
AsuII	TTCGAA	1 cut(s)	159
AvaI	CYCGRG	1 cut(s)	578
AvaII	GGWCC	1 cut(s)	289
BaeGI	GKGCMC	1 cut(s)	1677
BaeI	ACNNNNGTAYC	2 cut(s)	1923, 1956
BanI	GGYRCC	2 cut(s)	564, 1473
BanII	GRGCYC	1 cut(s)	2027
BauI	CACGAG	3 cut(s)	352, 451, 517
BbsI	GAAGAC	2 cut(s)	1016, 1099
Bbv12I	GWGCWC	1 cut(s)	2027
BbvI	GCAGC	2 cut(s)	1147, 1219
BccI	CCATC	4 cut(s)	799, 892, 1081, 1403
BceAI	ACGGC	3 cut(s)	200, 313, 1884
BciT130I	CCWGG	2 cut(s)	269, 1936
BclI	TGATCA	3 cut(s)	642, 1690, 1804
BcoDI	GTCTC	3 cut(s)	35, 575, 1923
BcuI	ACTAGT	2 cut(s)	938, 1657
BfaI	CTAG	4 cut(s)	501, 939, 1478, 1658
BfoI	RGCGCY	1 cut(s)	663
BfuAI	ACCTGC	1 cut(s)	836
BglII	AGATCT	1 cut(s)	1814
BisI	GCNGC	3 cut(s)	1161, 1208, 1990
BlsI	GCNGC	3 cut(s)	1162, 1209, 1991
BmcAI	AGTACT	1 cut(s)	1955
Bme1390I	CCNGG	2 cut(s)	269, 1936
Bme18I	GGWCC	1 cut(s)	289
BmeT110I	CYCGRG	1 cut(s)	578
BmgT120I	GGNCC	1 cut(s)	289
BmiI	GGNNCC	2 cut(s)	566, 1475
BmrFI	CCNGG	2 cut(s)	269, 1936
BmsI	GCATC	4 cut(s)	309, 463, 1194, 1882
BpiI	GAAGAC	2 cut(s)	1016, 1099
Bpu14I	TTCGAA	1 cut(s)	159
BpuEI	CTTGAG	2 cut(s)	1196, 1929
BsaAI	YACGTR	1 cut(s)	1437
BsaHI	GRCGYC	2 cut(s)	139, 1380
BsaJI	CCNNGG	2 cut(s)	267, 1935
BsaWI	WCCGGW	1 cut(s)	178
Bsc4I	CCNNNNNNNGG	6 cut(s)	393, 436, 956, 1483, 1727, 1996
Bse118I	RCCGGY	2 cut(s)	80, 368
Bse1I	ACTGG	2 cut(s)	1256, 1721
Bse3DI	GCAATG	2 cut(s)	1548, 1965
BseAI	TCCGGA	1 cut(s)	178
BseBI	CCWGG	2 cut(s)	269, 1936
BseDI	CCNNGG	2 cut(s)	267, 1935
BseGI	GGATG	7 cut(s)	300, 823, 900, 910, 1209, 1234, 1557
BseLI	CCNNNNNNNGG	6 cut(s)	393, 436, 956, 1483, 1727, 1996
BseMI	GCAATG	2 cut(s)	1548, 1965
BseMII	CTCAG	1 cut(s)	2018
BseNI	ACTGG	2 cut(s)	1256, 1721
BsePI	GCGCGC	1 cut(s)	785
BseRI	GAGGAG	1 cut(s)	815
BseSI	GKGCMC	1 cut(s)	1677
BseXI	GCAGC	2 cut(s)	1147, 1219
BsgI	GTGCAG	1 cut(s)	1284
Bsh1236I	CGCG	4 cut(s)	173, 242, 527, 787
Bsh1285I	CGRYCG	1 cut(s)	468
BshFI	GGCC	3 cut(s)	919, 1528, 1989
BshNI	GGYRCC	2 cut(s)	564, 1473
BsiEI	CGRYCG	1 cut(s)	468
BsiHKAI	GWGCWC	1 cut(s)	2027
BsiHKCI	CYCGRG	1 cut(s)	578
BsiSI	CCGG	5 cut(s)	81, 179, 369, 430, 1226
BslFI	GGGAC	4 cut(s)	250, 553, 751, 1584
BslI	CCNNNNNNNGG	6 cut(s)	393, 436, 956, 1483, 1727, 1996
BsmAI	GTCTC	3 cut(s)	35, 575, 1923
BsmBI	CGTCTC	1 cut(s)	575
BsmFI	GGGAC	4 cut(s)	250, 553, 751, 1584
BsmI	GAATGC	1 cut(s)	1129
BsnI	GGCC	3 cut(s)	919, 1528, 1989
BsoBI	CYCGRG	1 cut(s)	578
Bsp119I	TTCGAA	1 cut(s)	159
Bsp1286I	GDGCHC	2 cut(s)	1677, 2027
Bsp13I	TCCGGA	1 cut(s)	178
Bsp1407I	TGTACA	2 cut(s)	447, 867
Bsp143I	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
Bsp68I	TCGCGA	1 cut(s)	242
BspANI	GGCC	3 cut(s)	919, 1528, 1989
BspCNI	CTCAG	1 cut(s)	2017
BspEI	TCCGGA	1 cut(s)	178
BspFNI	CGCG	4 cut(s)	173, 242, 527, 787
BspLI	GGNNCC	2 cut(s)	566, 1475
BspMI	ACCTGC	1 cut(s)	836
BspPI	GGATC	2 cut(s)	373, 404
BspT104I	TTCGAA	1 cut(s)	159
BspT107I	GGYRCC	2 cut(s)	564, 1473
BsrBI	CCGCTC	1 cut(s)	193
BsrDI	GCAATG	2 cut(s)	1548, 1965
BsrFI	RCCGGY	2 cut(s)	80, 368
BsrGI	TGTACA	2 cut(s)	447, 867
BsrI	ACTGG	2 cut(s)	1256, 1721
BssAI	RCCGGY	2 cut(s)	80, 368
BssECI	CCNNGG	2 cut(s)	267, 1935
BssHII	GCGCGC	1 cut(s)	785
BssMI	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
BssNI	GRCGYC	2 cut(s)	139, 1380
BssSI	CACGAG	3 cut(s)	352, 451, 517
Bst2BI	CACGAG	3 cut(s)	352, 451, 517
Bst2UI	CCWGG	2 cut(s)	269, 1936
Bst4CI	ACNGT	5 cut(s)	544, 569, 1240, 1679, 1953
BstACI	GRCGYC	2 cut(s)	139, 1380
BstAPI	GCANNNNNTGC	1 cut(s)	851
BstAUI	TGTACA	2 cut(s)	447, 867
BstBAI	YACGTR	1 cut(s)	1437
BstBI	TTCGAA	1 cut(s)	159
BstC8I	GCNNGC	9 cut(s)	343, 658, 783, 787, 996, 1032, 1182, 1774, 1897
BstDEI	CTNAG	3 cut(s)	533, 1371, 2004
BstENI	CCTNNNNNAGG	1 cut(s)	1481
BstF5I	GGATG	7 cut(s)	300, 823, 900, 910, 1209, 1234, 1557
BstFNI	CGCG	4 cut(s)	173, 242, 527, 787
BstH2I	RGCGCY	1 cut(s)	663
BstHHI	GCGC	6 cut(s)	429, 662, 787, 789, 856, 994
BstKTI	GATC	7 cut(s)	381, 399, 645, 1693, 1807, 1817, 1985
BstMAI	GTCTC	3 cut(s)	35, 575, 1923
BstMBI	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
BstMCI	CGRYCG	1 cut(s)	468
BstMWI	GCNNNNNNNGC	5 cut(s)	253, 657, 842, 851, 991
BstNI	CCWGG	2 cut(s)	269, 1936
BstNSI	RCATGY	3 cut(s)	448, 998, 1780
BstSCI	CCNGG	2 cut(s)	267, 1934
BstSLI	GKGCMC	1 cut(s)	1677
BstUI	CGCG	4 cut(s)	173, 242, 527, 787
BstV1I	GCAGC	2 cut(s)	1147, 1219
BstV2I	GAAGAC	2 cut(s)	1016, 1099
BstX2I	RGATCY	2 cut(s)	378, 1814
BstYI	RGATCY	2 cut(s)	378, 1814
BsuRI	GGCC	3 cut(s)	919, 1528, 1989
BtsCI	GGATG	7 cut(s)	300, 823, 900, 910, 1209, 1234, 1557
BtsI	GCAGTG	1 cut(s)	1245
BtsIMutI	CAGTG	3 cut(s)	1119, 1245, 1675
BtuMI	TCGCGA	1 cut(s)	242
BveI	ACCTGC	1 cut(s)	836
Cac8I	GCNNGC	9 cut(s)	343, 658, 783, 787, 996, 1032, 1182, 1774, 1897
CfoI	GCGC	6 cut(s)	429, 662, 787, 789, 856, 994
Cfr10I	RCCGGY	2 cut(s)	80, 368
Cfr13I	GGNCC	1 cut(s)	289
CseI	GACGC	5 cut(s)	147, 179, 334, 697, 1369
Csp6I	GTAC	9 cut(s)	448, 514, 565, 757, 868, 1366, 1474, 1923, 1954
CviQI	GTAC	9 cut(s)	448, 514, 565, 757, 868, 1366, 1474, 1923, 1954
DdeI	CTNAG	3 cut(s)	533, 1371, 2004
DpnI	GATC	7 cut(s)	380, 398, 644, 1692, 1806, 1816, 1984
DpnII	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
DraIII	CACNNNGTG	1 cut(s)	1493
EaeI	YGGCCR	1 cut(s)	1987
Ecl136II	GAGCTC	1 cut(s)	2025
Eco24I	GRGCYC	1 cut(s)	2027
Eco47I	GGWCC	1 cut(s)	289
Eco53kI	GAGCTC	1 cut(s)	2025
Eco57I	CTGAAG	1 cut(s)	1028
Eco88I	CYCGRG	1 cut(s)	578
EcoICRI	GAGCTC	1 cut(s)	2025
EcoNI	CCTNNNNNAGG	1 cut(s)	1481
EcoRI	GAATTC	1 cut(s)	922
EcoRII	CCWGG	2 cut(s)	267, 1934
EcoT38I	GRGCYC	1 cut(s)	2027
Esp3I	CGTCTC	1 cut(s)	575
FalI	AAGNNNNNCTT	2 cut(s)	1307, 1339
FaqI	GGGAC	4 cut(s)	250, 553, 751, 1584
FauI	CCCGC	4 cut(s)	63, 544, 649, 1559
FbaI	TGATCA	3 cut(s)	642, 1690, 1804
Fnu4HI	GCNGC	3 cut(s)	1161, 1208, 1990
FokI	GGATG	7 cut(s)	287, 830, 907, 917, 1216, 1241, 1564
FriOI	GRGCYC	1 cut(s)	2027
Fsp4HI	GCNGC	3 cut(s)	1161, 1208, 1990
FspBI	CTAG	4 cut(s)	501, 939, 1478, 1658
FspI	TGCGCA	1 cut(s)	855
GlaI	GCGC	6 cut(s)	428, 661, 786, 788, 855, 993
GluI	GCNGC	3 cut(s)	1161, 1208, 1990
HaeII	RGCGCY	1 cut(s)	663
HaeIII	GGCC	3 cut(s)	919, 1528, 1989
HapII	CCGG	5 cut(s)	81, 179, 369, 430, 1226
HgaI	GACGC	5 cut(s)	147, 179, 334, 697, 1369
HhaI	GCGC	6 cut(s)	429, 662, 787, 789, 856, 994
Hin1I	GRCGYC	2 cut(s)	139, 1380
Hin6I	GCGC	6 cut(s)	427, 660, 785, 787, 854, 992
HinP1I	GCGC	6 cut(s)	427, 660, 785, 787, 854, 992
HincII	GTYRAC	1 cut(s)	310
HindII	GTYRAC	1 cut(s)	310
HindIII	AAGCTT	5 cut(s)	779, 876, 977, 1586, 1758
HinfI	GANTC	9 cut(s)	182, 237, 263, 274, 405, 1297, 1454, 1532, 1631
HpaII	CCGG	5 cut(s)	81, 179, 369, 430, 1226
HphI	GGTGA	8 cut(s)	15, 64, 98, 328, 451, 715, 821, 1088
Hpy166II	GTNNAC	6 cut(s)	220, 310, 442, 450, 514, 1440
Hpy188I	TCNGA	6 cut(s)	153, 396, 592, 1809, 1833, 2007
Hpy188III	TCNNGA	9 cut(s)	132, 179, 241, 278, 578, 580, 646, 1784, 1946
Hpy8I	GTNNAC	6 cut(s)	220, 310, 442, 450, 514, 1440
Hpy99I	CGWCG	3 cut(s)	138, 141, 173
HpyAV	CCTTC	8 cut(s)	61, 121, 902, 1208, 1262, 1267, 1285, 1588
HpyCH4III	ACNGT	5 cut(s)	544, 569, 1240, 1679, 1953
HpyCH4IV	ACGT	3 cut(s)	510, 584, 1436
HpyF10VI	GCNNNNNNNGC	5 cut(s)	253, 657, 842, 851, 991
HpyF3I	CTNAG	3 cut(s)	533, 1371, 2004
HpySE526I	ACGT	3 cut(s)	510, 584, 1436
Hsp92I	GRCGYC	2 cut(s)	139, 1380
HspAI	GCGC	6 cut(s)	427, 660, 785, 787, 854, 992
Kpn2I	TCCGGA	1 cut(s)	178
KpnI	GGTACC	2 cut(s)	568, 1477
Ksp22I	TGATCA	3 cut(s)	642, 1690, 1804
Kzo9I	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
LmnI	GCTCC	6 cut(s)	123, 198, 833, 883, 1417, 1682
Lsp1109I	GCAGC	2 cut(s)	1147, 1219
LweI	GCATC	4 cut(s)	309, 463, 1194, 1882
MaeI	CTAG	4 cut(s)	501, 939, 1478, 1658
MaeII	ACGT	3 cut(s)	510, 584, 1436
MaeIII	GTNAC	6 cut(s)	86, 186, 1076, 1154, 1234, 1868
MalI	GATC	7 cut(s)	380, 398, 644, 1692, 1806, 1816, 1984
MbiI	CCGCTC	1 cut(s)	193
MboI	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
MfeI	CAATTG	1 cut(s)	1686
MflI	RGATCY	2 cut(s)	378, 1814
MhlI	GDGCHC	2 cut(s)	1677, 2027
MluI	ACGCGT	2 cut(s)	171, 525
MlyI	GAGTC	4 cut(s)	176, 272, 399, 1640
MmeI	TCCRAC	2 cut(s)	342, 1115
MroI	TCCGGA	1 cut(s)	178
MroXI	GAANNNNTTC	3 cut(s)	713, 1322, 1838
MseI	TTAA	3 cut(s)	777, 1221, 1355
MslI	CAYNNNNRTG	4 cut(s)	999, 1085, 1202, 1305
MspI	CCGG	5 cut(s)	81, 179, 369, 430, 1226
MspR9I	CCNGG	2 cut(s)	269, 1936
MunI	CAATTG	1 cut(s)	1686
Mva1269I	GAATGC	1 cut(s)	1129
MvaI	CCWGG	2 cut(s)	269, 1936
MvnI	CGCG	4 cut(s)	173, 242, 527, 787
MwoI	GCNNNNNNNGC	5 cut(s)	253, 657, 842, 851, 991
NdeII	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
NlaIV	GGNNCC	2 cut(s)	566, 1475
NmuCI	GTSAC	4 cut(s)	86, 1076, 1234, 1868
NruI	TCGCGA	1 cut(s)	242
NsbI	TGCGCA	1 cut(s)	855
NspI	RCATGY	3 cut(s)	448, 998, 1780
NspV	TTCGAA	1 cut(s)	159
PaeI	GCATGC	1 cut(s)	998
PaeR7I	CTCGAG	1 cut(s)	578
PauI	GCGCGC	1 cut(s)	785
PciI	ACATGT	1 cut(s)	444
PcsI	WCGNNNNNNNCGW	6 cut(s)	139, 165, 303, 414, 465, 524
PctI	GAATGC	1 cut(s)	1129
PdmI	GAANNNNTTC	3 cut(s)	713, 1322, 1838
PfeI	GAWTC	5 cut(s)	237, 274, 1297, 1454, 1532
PkrI	GCNGC	3 cut(s)	1162, 1209, 1991
PleI	GAGTC	4 cut(s)	176, 271, 399, 1639
PpsI	GAGTC	4 cut(s)	176, 271, 399, 1639
Ppu21I	YACGTR	1 cut(s)	1437
PscI	ACATGT	1 cut(s)	444
Psp124BI	GAGCTC	1 cut(s)	2027
Psp6I	CCWGG	2 cut(s)	267, 1934
PspGI	CCWGG	2 cut(s)	267, 1934
PspN4I	GGNNCC	2 cut(s)	566, 1475
PspPI	GGNCC	1 cut(s)	289
PsuI	RGATCY	2 cut(s)	378, 1814
PteI	GCGCGC	1 cut(s)	785
RruI	TCGCGA	1 cut(s)	242
RsaI	GTAC	9 cut(s)	449, 515, 566, 758, 869, 1367, 1475, 1924, 1955
RsaNI	GTAC	9 cut(s)	448, 514, 565, 757, 868, 1366, 1474, 1923, 1954
RseI	CAYNNNNRTG	4 cut(s)	999, 1085, 1202, 1305
SacI	GAGCTC	1 cut(s)	2027
SaqAI	TTAA	3 cut(s)	777, 1221, 1355
SatI	GCNGC	3 cut(s)	1161, 1208, 1990
Sau3AI	GATC	7 cut(s)	378, 396, 642, 1690, 1804, 1814, 1982
Sau96I	GGNCC	1 cut(s)	289
ScaI	AGTACT	1 cut(s)	1955
SchI	GAGTC	4 cut(s)	176, 272, 399, 1640
ScrFI	CCNGG	2 cut(s)	269, 1936
SduI	GDGCHC	2 cut(s)	1677, 2027
SfaNI	GCATC	4 cut(s)	309, 463, 1194, 1882
Sfr274I	CTCGAG	1 cut(s)	578
SfuI	TTCGAA	1 cut(s)	159
SgrAI	CRCCGGYG	1 cut(s)	80
SinI	GGWCC	1 cut(s)	289
SlaI	CTCGAG	1 cut(s)	578
SmiMI	CAYNNNNRTG	4 cut(s)	999, 1085, 1202, 1305
SmlI	CTYRAG	3 cut(s)	578, 1175, 1944
SmoI	CTYRAG	3 cut(s)	578, 1175, 1944
SpeI	ACTAGT	2 cut(s)	938, 1657
SphI	GCATGC	1 cut(s)	998
SspMI	CTAG	4 cut(s)	501, 939, 1478, 1658
SstI	GAGCTC	1 cut(s)	2027
StyD4I	CCNGG	2 cut(s)	267, 1934
TaaI	ACNGT	5 cut(s)	544, 569, 1240, 1679, 1953
TaiI	ACGT	3 cut(s)	513, 587, 1439
TaqI	TCGA	8 cut(s)	159, 408, 468, 489, 579, 1464, 1710, 1981
TaqII	GACCGA	2 cut(s)	454, 1887
TatI	WGTACW	6 cut(s)	447, 513, 756, 867, 1365, 1953
TauI	GCSGC	1 cut(s)	1992
TfiI	GAWTC	5 cut(s)	237, 274, 1297, 1454, 1532
Tru1I	TTAA	3 cut(s)	777, 1221, 1355
Tru9I	TTAA	3 cut(s)	777, 1221, 1355
TscAI	CASTG	3 cut(s)	1119, 1252, 1682
TseFI	GTSAC	4 cut(s)	86, 1076, 1234, 1868
TseI	GCWGC	2 cut(s)	1160, 1207
Tsp45I	GTSAC	4 cut(s)	86, 1076, 1234, 1868
TspDTI	ATGAA	3 cut(s)	632, 921, 1289
TspRI	CASTG	3 cut(s)	1119, 1252, 1682
VpaK11BI	GGWCC	1 cut(s)	289
XagI	CCTNNNNNAGG	1 cut(s)	1481
XapI	RAATTY	5 cut(s)	155, 922, 1579, 1624, 1880
XceI	RCATGY	3 cut(s)	448, 998, 1780
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1466
XhoI	CTCGAG	1 cut(s)	578
XmnI	GAANNNNTTC	3 cut(s)	713, 1322, 1838
XspI	CTAG	4 cut(s)	501, 939, 1478, 1658
ZrmI	AGTACT	1 cut(s)	1955

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.