Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0010286

Physical Location & Seq

Genomic Coordinates Forward (+)

10852051 .. 10854096

Gene Structure 2046 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1098200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2046 bp

ATGGAAGCTGTAACAGTAACCTCACCGCCTCTCTCTCTGCACCACCACTGCTTCCCGCCAAGCACCCGCATCGCCGCCGCAAACTCTAATGAGTGTAATAAACACCGCCAAACCTTCAAGCGGAAAGCTTTATCATCACGGCGGAAACAAAAGACTCCGACTTTCGAAGAACACGACGCGTTTCCGGACTCCTTGCCGCTCCACACGAAGAACCCACATGCCATTTACAAGGACATACAGAGCTTTGCAAGGAGAAATAAGATCGAGAAGGCCCTGAGTATCTTGGACTACTTGGACCAGCAGGGCATCCCGGTTAACGTCACCACATTCTCCGCCCTCATCGCCGCATGTGTCCGTACAAGGTCGTTGGATCACGGCAAGCAAATCCACACTCATATTCGGATTAATGGGCTCGAAAACAATGACTTTATACGCACAAAGTTGGTAAATATGTACACTAGTTTTGGGTCAGTGGATGATGCACAGAAGCTGTTTGATGAAAGTTCTAGCAAGAACGTGTACTCGTGGAATGCCTTGCTTAGAGGCACTGTCATTGCTGGTGGGAAGCGGTACGGTGATGTTCTTGATACTTATTCGGAAATGCGGGTGTTAGGGGTTGAGTTGAATGTGTATAGTTTCTCTAGTGTGATTAAGAGCTTTGCAGGTGCTTCGGCACTGTCGCAAGGTTTGAAGACGCATGCCCTTTTGGTTAAGAACGGTTTCATCGATAGCGCAATTGTTCGGACCAGTTTGGTTGATTTGTACTTTAAATGTGGCAAGATTAAGCTTGCTCACCGCTTGTTTGAAGAATTTGGTGATAGAGATGTTGTTGTATGGGGAGCCATGATTGCAGGTTTTGCGCATAATAGGCGGCAAAGGGAAGCTTTGGAGTATGTTAGGATGATGGTCGATGAAGGAATAAGGCTGAATTCGGTTATATTGACTAGTATTCTTCCTGTGATTGGGGACGTTGGGGCTCGAAAGCTAGGGCAGGAGGTTCATGCTTTTGTGGTGAAGACGAAAAGCTATTCGAAGCAGATTTTCATTCAGTCTGGCTTGATAGACATGTATTGCAAGTGTGGAGATATGGATGTGGGGCGGCGGGTTTTTTATCATTCTAAGGAGAGGAATACAATTTGCTGGACTGCTTTGATGTCGGGTTATGTTGCAAATGGGAGGCCTGAGCAGGCATTGCGATCGATCATTTGGATGCAGCAGGAAGGGTTTAAGCCAGATTTGGTCACGGTTGCCACCATCCTTCCAGTTTGTGCAGAATTGAAGGATTTGAAAAGAGGGAAGGAGATACATGCATATGCTGTGAAAAATTGTTTCTTGCCCAATGTATCTATAATTTCTTCTTTGATGGTGATGTACTCGAAGTGTGGCATCTTTGAGTACTCCATAAGACTATTCGATGGGATGGAGAACAGAAATATTATTCTTTGGACGGCCATGATTGATTCCTATATTGACAACGGATGCCTCTACGAGGCACTTGGTCTGGTAAGGTCAATGGTCTTATCGAAGCACAGGCCAGATTCCGTTGCAATGGCAAGGATTTTGAATATTTGCAATGGCCTAAAGAATTTGAAGCTTGGGAAAGAAATTCATGGACAAGTTTTGAAGAAGAACTTTGAATCGATCCCTTTTGTTACTGCTGAAATTGTGAAAATGTATGGGCGATGTGGAGCCATTGATCATGCAAAGTCTGTTTTCGATGCAATCCCTGTCAAGGGTTCAATGACTTGGACTGCAATCATAGAGGCTTATGCATACAATGACATGTATCAAGAAGCTATCAATCTGTTCGATCAGATGAGATCTAAAGACTTCACTCCGAACCATTTCACTTTCCAGGTGGTTCTATCTATTTGCGATCGAGCTGGATTTGTTGATGATGCTTGCCGTATCTTCCATTTAATGTCTCGTGTGTACAAAGTTAAGGTATCTGAGGAACAATATTCTCTAATCATTGGACTTCTTGATCGTTTTGGCCGTGTTGAGGAGGCTCAAAGATTTACAACATTGAGTTCATCTCTGTCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3 Pkinase

Protein Analysis

682

Amino Acids

76.86

Weight (kDa)

9.14

Isoelectric Point (pI)

39.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	377 - 424	6.9e-09	PPR repeat family
PPR_2	PF13041	580 - 623	4.4e-10	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010286)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G71460
fragaria_vesca	FvH4_7g09420 FvH4_7g09420 FvH4_7g09420
malus_domestica	MD07G1098200.v1.1
prunus_persica	Prupe.2G122200_v2.0.a1
pyrus_communis	pycom07g08080 pycom12652g00070 pycom12652g00080
rosa_chinensis	RchiOBHm_Chr1g0346071
rosa_laevigata	RLG00000028816
rosa_multiflora	Rmu_sc0009190.1_g000001 Rmu_ssc0000255.1_g000072
rosa_roxburghii	Rroxscaffold_4G00308840
rosa_rugosa	Rorug01G0177800
rosa_samantha	Rh1AG197300 Rh1BG162500 Rh1CG182300 Rh1DG193000
rosa_wichuraiana	Rw1G016350 Rw1G016560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	653
Acc16I	TGCGCA	1 cut(s)	861
Acc36I	ACCTGC	2 cut(s)	653, 842
AccBSI	CCGCTC	1 cut(s)	199
AccII	CGCG	1 cut(s)	179
AccIII	TCCGGA	1 cut(s)	184
AclWI	GGATC	2 cut(s)	378, 1636
AcoI	YGGCCR	2 cut(s)	1449, 1993
AcsI	RAATTY	4 cut(s)	809, 928, 1585, 1605
AfaI	GTAC	8 cut(s)	358, 455, 521, 572, 764, 1373, 1397, 1934
AfiI	CCNNNNNNNGG	6 cut(s)	120, 962, 1489, 1732, 1733, 2002
AflIII	ACRYGT	4 cut(s)	177, 516, 1065, 1782
AhlI	ACTAGT	2 cut(s)	458, 944
AjnI	CCWGG	1 cut(s)	1854
Alw26I	GTCTC	1 cut(s)	1929
AlwI	GGATC	2 cut(s)	378, 1636
AlwNI	CAGNNNCTG	1 cut(s)	490
Aor13HI	TCCGGA	1 cut(s)	184
AoxI	GGCC	6 cut(s)	270, 1178, 1449, 1532, 1576, 1993
ApeKI	GCWGC	1 cut(s)	1213
ApoI	RAATTY	4 cut(s)	809, 928, 1585, 1605
AseI	ATTAAT	1 cut(s)	405
Asp700I	GAANNNNTTC	2 cut(s)	719, 1844
AspLEI	GCGC	2 cut(s)	734, 862
AspS9I	GGNCC	3 cut(s)	271, 295, 744
AsuC2I	CCSGG	1 cut(s)	311
AsuHPI	GGTGA	7 cut(s)	15, 313, 587, 785, 827, 1024, 1378
AsuII	TTCGAA	2 cut(s)	165, 1031
AvaII	GGWCC	2 cut(s)	295, 744
BanII	GRGCYC	2 cut(s)	414, 979
BauI	CACGAG	2 cut(s)	523, 1926
BbsI	GAAGAC	2 cut(s)	698, 1022
BbvI	GCAGC	1 cut(s)	1225
BccI	CCATC	5 cut(s)	898, 1262, 1357, 1409, 1414
BceAI	ACGGC	5 cut(s)	155, 391, 1464, 1890, 1980
BcgI	CGANNNNNNTGC	6 cut(s)	52, 86, 651, 685, 1179, 1213
BciT130I	CCWGG	1 cut(s)	1856
BclI	TGATCA	1 cut(s)	1696
BcnI	CCSGG	1 cut(s)	311
BcoDI	GTCTC	1 cut(s)	1929
BcuI	ACTAGT	2 cut(s)	458, 944
BfaI	CTAG	5 cut(s)	459, 507, 642, 945, 986
BfuAI	ACCTGC	2 cut(s)	653, 842
BglII	AGATCT	1 cut(s)	1820
BisI	GCNGC	7 cut(s)	75, 78, 197, 345, 872, 1100, 1214
BlsI	GCNGC	7 cut(s)	76, 79, 198, 346, 873, 1101, 1215
BmcAI	AGTACT	1 cut(s)	1397
Bme1390I	CCNGG	2 cut(s)	311, 1856
Bme18I	GGWCC	2 cut(s)	295, 744
BmgT120I	GGNCC	3 cut(s)	271, 295, 744
BmiI	GGNNCC	2 cut(s)	841, 1690
BmrFI	CCNGG	2 cut(s)	311, 1856
BmsI	GCATC	8 cut(s)	78, 315, 469, 1200, 1395, 1469, 1708, 1888
BpiI	GAAGAC	2 cut(s)	698, 1022
BplI	GAGNNNNNCTC	1 cut(s)	2020
Bpu10I	CCTNAGC	1 cut(s)	1182
Bpu14I	TTCGAA	2 cut(s)	165, 1031
BpuMI	CCSGG	1 cut(s)	311
Bsa29I	ATCGAT	3 cut(s)	726, 1199, 1640
BsaWI	WCCGGW	1 cut(s)	184
Bsc4I	CCNNNNNNNGG	6 cut(s)	120, 962, 1489, 1732, 1733, 2002
Bse1I	ACTGG	2 cut(s)	747, 1262
Bse3DI	GCAATG	4 cut(s)	552, 1190, 1554, 1579
BseAI	TCCGGA	1 cut(s)	184
BseBI	CCWGG	1 cut(s)	1856
BseCI	ATCGAT	3 cut(s)	726, 1199, 1640
BseGI	GGATG	8 cut(s)	306, 481, 906, 1096, 1215, 1254, 1425, 1484
BseLI	CCNNNNNNNGG	6 cut(s)	120, 962, 1489, 1732, 1733, 2002
BseMI	GCAATG	4 cut(s)	552, 1190, 1554, 1579
BseMII	CTCAG	3 cut(s)	266, 1173, 1941
BseNI	ACTGG	2 cut(s)	747, 1262
BseRI	GAGGAG	1 cut(s)	2018
BseXI	GCAGC	1 cut(s)	1225
BsgI	GTGCAG	2 cut(s)	23, 1290
Bsh1236I	CGCG	1 cut(s)	179
Bsh1285I	CGRYCG	2 cut(s)	1199, 1879
BshFI	GGCC	6 cut(s)	272, 1180, 1451, 1534, 1578, 1995
BshVI	ATCGAT	3 cut(s)	726, 1199, 1640
BsiEI	CGRYCG	2 cut(s)	1199, 1879
BsiSI	CCGG	2 cut(s)	185, 311
BslFI	GGGAC	1 cut(s)	980
BslI	CCNNNNNNNGG	6 cut(s)	120, 962, 1489, 1732, 1733, 2002
BsmAI	GTCTC	1 cut(s)	1929
BsmFI	GGGAC	1 cut(s)	980
BsmI	GAATGC	1 cut(s)	535
BsnI	GGCC	6 cut(s)	272, 1180, 1451, 1534, 1578, 1995
Bsp119I	TTCGAA	2 cut(s)	165, 1031
Bsp1286I	GDGCHC	2 cut(s)	414, 979
Bsp13I	TCCGGA	1 cut(s)	184
Bsp1407I	TGTACA	2 cut(s)	453, 1932
BspANI	GGCC	6 cut(s)	272, 1180, 1451, 1534, 1578, 1995
BspCNI	CTCAG	3 cut(s)	267, 1174, 1942
BspDI	ATCGAT	3 cut(s)	726, 1199, 1640
BspEI	TCCGGA	1 cut(s)	184
BspFNI	CGCG	1 cut(s)	179
BspLI	GGNNCC	2 cut(s)	841, 1690
BspMI	ACCTGC	2 cut(s)	653, 842
BspPI	GGATC	2 cut(s)	378, 1636
BspT104I	TTCGAA	2 cut(s)	165, 1031
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	4 cut(s)	552, 1190, 1554, 1579
BsrGI	TGTACA	2 cut(s)	453, 1932
BsrI	ACTGG	2 cut(s)	747, 1262
BssSI	CACGAG	2 cut(s)	523, 1926
Bst2BI	CACGAG	2 cut(s)	523, 1926
Bst2UI	CCWGG	1 cut(s)	1856
Bst4CI	ACNGT	6 cut(s)	16, 550, 575, 678, 719, 1246
BstAPI	GCANNNNNTGC	2 cut(s)	857, 1192
BstAUI	TGTACA	2 cut(s)	453, 1932
BstBI	TTCGAA	2 cut(s)	165, 1031
BstC8I	GCNNGC	5 cut(s)	380, 699, 789, 1188, 1903
BstDEI	CTNAG	5 cut(s)	275, 539, 1119, 1182, 1950
BstENI	CCTNNNNNAGG	1 cut(s)	1487
BstF5I	GGATG	8 cut(s)	306, 481, 906, 1096, 1215, 1254, 1425, 1484
BstFNI	CGCG	1 cut(s)	179
BstHHI	GCGC	2 cut(s)	734, 862
BstMAI	GTCTC	1 cut(s)	1929
BstMCI	CGRYCG	2 cut(s)	1199, 1879
BstMWI	GCNNNNNNNGC	5 cut(s)	341, 848, 857, 868, 1192
BstNI	CCWGG	1 cut(s)	1856
BstNSI	RCATGY	6 cut(s)	221, 351, 701, 1069, 1310, 1786
BstSCI	CCNGG	2 cut(s)	309, 1854
BstUI	CGCG	1 cut(s)	179
BstV1I	GCAGC	1 cut(s)	1225
BstV2I	GAAGAC	2 cut(s)	698, 1022
BstX2I	RGATCY	1 cut(s)	1820
BstYI	RGATCY	1 cut(s)	1820
Bsu15I	ATCGAT	3 cut(s)	726, 1199, 1640
BsuRI	GGCC	6 cut(s)	272, 1180, 1451, 1534, 1578, 1995
BsuTUI	ATCGAT	3 cut(s)	726, 1199, 1640
BtgZI	GCGATG	3 cut(s)	55, 325, 1696
BtsCI	GGATG	8 cut(s)	306, 481, 906, 1096, 1215, 1254, 1425, 1484
BtsI	GCAGTG	1 cut(s)	46
BtsIMutI	CAGTG	4 cut(s)	46, 477, 546, 674
BveI	ACCTGC	2 cut(s)	653, 842
Cac8I	GCNNGC	5 cut(s)	380, 699, 789, 1188, 1903
CaiI	CAGNNNCTG	1 cut(s)	490
CfoI	GCGC	2 cut(s)	734, 862
Cfr13I	GGNCC	3 cut(s)	271, 295, 744
ClaI	ATCGAT	3 cut(s)	726, 1199, 1640
CseI	GACGC	2 cut(s)	185, 703
Csp6I	GTAC	8 cut(s)	357, 454, 520, 571, 763, 1372, 1396, 1933
CviQI	GTAC	8 cut(s)	357, 454, 520, 571, 763, 1372, 1396, 1933
DdeI	CTNAG	5 cut(s)	275, 539, 1119, 1182, 1950
DraI	TTTAAA	1 cut(s)	769
EaeI	YGGCCR	2 cut(s)	1449, 1993
EciI	GGCGGA	2 cut(s)	157, 322
Eco147I	AGGCCT	1 cut(s)	1180
Eco24I	GRGCYC	2 cut(s)	414, 979
Eco47I	GGWCC	2 cut(s)	295, 744
EcoNI	CCTNNNNNAGG	1 cut(s)	1487
EcoO109I	RGGNCCY	1 cut(s)	271
EcoRI	GAATTC	1 cut(s)	928
EcoRII	CCWGG	1 cut(s)	1854
EcoT22I	ATGCAT	2 cut(s)	1312, 1774
EcoT38I	GRGCYC	2 cut(s)	414, 979
FalI	AAGNNNNNCTT	4 cut(s)	868, 900, 1616, 1648
FaqI	GGGAC	1 cut(s)	980
FauI	CCCGC	4 cut(s)	63, 74, 597, 1095
FauNDI	CATATG	1 cut(s)	1312
FbaI	TGATCA	1 cut(s)	1696
Fnu4HI	GCNGC	7 cut(s)	75, 78, 197, 345, 872, 1100, 1214
FokI	GGATG	8 cut(s)	293, 488, 913, 1103, 1222, 1241, 1432, 1491
FriOI	GRGCYC	2 cut(s)	414, 979
Fsp4HI	GCNGC	7 cut(s)	75, 78, 197, 345, 872, 1100, 1214
FspBI	CTAG	5 cut(s)	459, 507, 642, 945, 986
FspI	TGCGCA	1 cut(s)	861
GlaI	GCGC	2 cut(s)	733, 861
GluI	GCNGC	7 cut(s)	75, 78, 197, 345, 872, 1100, 1214
HaeIII	GGCC	6 cut(s)	272, 1180, 1451, 1534, 1578, 1995
HapII	CCGG	2 cut(s)	185, 311
HgaI	GACGC	2 cut(s)	185, 703
HhaI	GCGC	2 cut(s)	734, 862
Hin6I	GCGC	2 cut(s)	732, 860
HinP1I	GCGC	2 cut(s)	732, 860
HincII	GTYRAC	1 cut(s)	316
HindII	GTYRAC	1 cut(s)	316
HindIII	AAGCTT	4 cut(s)	126, 785, 882, 1592
HinfI	GANTC	5 cut(s)	154, 188, 1460, 1538, 1637
HpaI	GTTAAC	1 cut(s)	316
HpaII	CCGG	2 cut(s)	185, 311
HphI	GGTGA	7 cut(s)	15, 313, 587, 785, 827, 1024, 1378
Hpy166II	GTNNAC	4 cut(s)	316, 456, 520, 1933
Hpy188I	TCNGA	7 cut(s)	159, 402, 598, 744, 1815, 1839, 1951
Hpy188III	TCNNGA	5 cut(s)	185, 265, 584, 1790, 1982
Hpy8I	GTNNAC	4 cut(s)	316, 456, 520, 1933
Hpy99I	CGWCG	1 cut(s)	179
HpyAV	CCTTC	7 cut(s)	124, 262, 908, 1214, 1268, 1273, 1291
HpyCH4III	ACNGT	6 cut(s)	16, 550, 575, 678, 719, 1246
HpyCH4IV	ACGT	3 cut(s)	318, 516, 969
HpyF10VI	GCNNNNNNNGC	5 cut(s)	341, 848, 857, 868, 1192
HpyF3I	CTNAG	5 cut(s)	275, 539, 1119, 1182, 1950
HpySE526I	ACGT	3 cut(s)	318, 516, 969
HspAI	GCGC	2 cut(s)	732, 860
Kpn2I	TCCGGA	1 cut(s)	184
Ksp22I	TGATCA	1 cut(s)	1696
KspAI	GTTAAC	1 cut(s)	316
LmnI	GCTCC	3 cut(s)	204, 839, 1688
Lsp1109I	GCAGC	1 cut(s)	1225
LweI	GCATC	8 cut(s)	78, 315, 469, 1200, 1395, 1469, 1708, 1888
MaeI	CTAG	5 cut(s)	459, 507, 642, 945, 986
MaeII	ACGT	3 cut(s)	318, 516, 969
MaeIII	GTNAC	5 cut(s)	10, 16, 319, 1240, 1651
MbiI	CCGCTC	1 cut(s)	199
MfeI	CAATTG	1 cut(s)	735
MflI	RGATCY	1 cut(s)	1820
MhlI	GDGCHC	2 cut(s)	414, 979
MluI	ACGCGT	1 cut(s)	177
MlyI	GAGTC	2 cut(s)	148, 182
MmeI	TCCRAC	2 cut(s)	182, 348
Mph1103I	ATGCAT	2 cut(s)	1312, 1774
MroI	TCCGGA	1 cut(s)	184
MroXI	GAANNNNTTC	2 cut(s)	719, 1844
MseI	TTAA	9 cut(s)	315, 405, 651, 711, 768, 783, 1227, 1919, 1941
MslI	CAYNNNNRTG	2 cut(s)	1208, 1311
MspI	CCGG	2 cut(s)	185, 311
MspR9I	CCNGG	2 cut(s)	311, 1856
MunI	CAATTG	1 cut(s)	735
Mva1269I	GAATGC	1 cut(s)	535
MvaI	CCWGG	1 cut(s)	1856
MvnI	CGCG	1 cut(s)	179
MwoI	GCNNNNNNNGC	5 cut(s)	341, 848, 857, 868, 1192
NciI	CCSGG	1 cut(s)	311
NdeI	CATATG	1 cut(s)	1312
NlaIV	GGNNCC	2 cut(s)	841, 1690
NmuCI	GTSAC	2 cut(s)	319, 1240
NsbI	TGCGCA	1 cut(s)	861
NsiI	ATGCAT	2 cut(s)	1312, 1774
NspI	RCATGY	6 cut(s)	221, 351, 701, 1069, 1310, 1786
NspV	TTCGAA	2 cut(s)	165, 1031
PaeI	GCATGC	1 cut(s)	701
PaqCI	CACCTGC	1 cut(s)	653
PceI	AGGCCT	1 cut(s)	1180
PciI	ACATGT	2 cut(s)	1065, 1782
PcsI	WCGNNNNNNNCGW	3 cut(s)	171, 723, 1993
PctI	GAATGC	1 cut(s)	535
PdmI	GAANNNNTTC	2 cut(s)	719, 1844
PfeI	GAWTC	3 cut(s)	1460, 1538, 1637
PkrI	GCNGC	7 cut(s)	76, 79, 198, 346, 873, 1101, 1215
Ple19I	CGATCG	2 cut(s)	1199, 1879
PleI	GAGTC	2 cut(s)	148, 182
PpsI	GAGTC	2 cut(s)	148, 182
PscI	ACATGT	2 cut(s)	1065, 1782
PshBI	ATTAAT	1 cut(s)	405
Psp6I	CCWGG	1 cut(s)	1854
PspGI	CCWGG	1 cut(s)	1854
PspN4I	GGNNCC	2 cut(s)	841, 1690
PspPI	GGNCC	3 cut(s)	271, 295, 744
PstNI	CAGNNNCTG	1 cut(s)	490
PsuI	RGATCY	1 cut(s)	1820
PvuI	CGATCG	2 cut(s)	1199, 1879
RsaI	GTAC	8 cut(s)	358, 455, 521, 572, 764, 1373, 1397, 1934
RsaNI	GTAC	8 cut(s)	357, 454, 520, 571, 763, 1372, 1396, 1933
RseI	CAYNNNNRTG	2 cut(s)	1208, 1311
SaqAI	TTAA	9 cut(s)	315, 405, 651, 711, 768, 783, 1227, 1919, 1941
SatI	GCNGC	7 cut(s)	75, 78, 197, 345, 872, 1100, 1214
Sau96I	GGNCC	3 cut(s)	271, 295, 744
ScaI	AGTACT	1 cut(s)	1397
SchI	GAGTC	2 cut(s)	148, 182
ScrFI	CCNGG	2 cut(s)	311, 1856
SduI	GDGCHC	2 cut(s)	414, 979
SfaNI	GCATC	8 cut(s)	78, 315, 469, 1200, 1395, 1469, 1708, 1888
SfuI	TTCGAA	2 cut(s)	165, 1031
SinI	GGWCC	2 cut(s)	295, 744
SmiMI	CAYNNNNRTG	2 cut(s)	1208, 1311
SpeI	ACTAGT	2 cut(s)	458, 944
SphI	GCATGC	1 cut(s)	701
SseBI	AGGCCT	1 cut(s)	1180
SspI	AATATT	3 cut(s)	1435, 1567, 1961
SspMI	CTAG	5 cut(s)	459, 507, 642, 945, 986
StuI	AGGCCT	1 cut(s)	1180
StyD4I	CCNGG	2 cut(s)	309, 1854
TaaI	ACNGT	6 cut(s)	16, 550, 575, 678, 719, 1246
TaiI	ACGT	3 cut(s)	321, 519, 972
TatI	WGTACW	6 cut(s)	453, 519, 762, 1371, 1395, 1932
TauI	GCSGC	6 cut(s)	77, 80, 199, 347, 874, 1102
TfiI	GAWTC	3 cut(s)	1460, 1538, 1637
Tru1I	TTAA	9 cut(s)	315, 405, 651, 711, 768, 783, 1227, 1919, 1941
Tru9I	TTAA	9 cut(s)	315, 405, 651, 711, 768, 783, 1227, 1919, 1941
TscAI	CASTG	4 cut(s)	53, 477, 553, 681
TseFI	GTSAC	2 cut(s)	319, 1240
TseI	GCWGC	1 cut(s)	1213
Tsp45I	GTSAC	2 cut(s)	319, 1240
TspDTI	ATGAA	7 cut(s)	513, 712, 927, 989, 1033, 1598, 2022
TspGWI	ACGGA	3 cut(s)	344, 1491, 1531
TspRI	CASTG	4 cut(s)	53, 477, 553, 681
VpaK11BI	GGWCC	2 cut(s)	295, 744
VspI	ATTAAT	1 cut(s)	405
XagI	CCTNNNNNAGG	1 cut(s)	1487
XapI	RAATTY	4 cut(s)	809, 928, 1585, 1605
XceI	RCATGY	6 cut(s)	221, 351, 701, 1069, 1310, 1786
XmnI	GAANNNNTTC	2 cut(s)	719, 1844
XspI	CTAG	5 cut(s)	459, 507, 642, 945, 986
ZrmI	AGTACT	1 cut(s)	1397
Zsp2I	ATGCAT	2 cut(s)	1312, 1774

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.