Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0010494

Physical Location & Seq

Genomic Coordinates Forward (+)

9126866 .. 9136495

Gene Structure 9630 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g09510.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2646 bp

ATGGGGAGCACCGGTGAGCATGACCGGAAACGGCGTCATATTAGCTCCATATCGTCGCCCACGGCTGCTGCTGCTGCTGCTGCTGCTAAGAAGCAGCCGTTTTTGCCTCTTTCCGAGGATAAGAAGCTTGACATTGCTGTCCTTCAATATCAAAATCAAAAGCTACTACAGAAATTAGAGACTCAAAAGGTCGAGTACTCTGCTCTTGAGAATGAATTGGCCCAGTTGAAGAAGAAACAACTGCCATATGATCCCACACTTATGGTGGTCAACAAGTCTTGGAAAGAGTTGGTTAAAGACTTGGAATCCTGTTCTATCCGTTCAAGAAAGTCAACCTGTCAGGAAGATGTTAAAGACAACCTTGTCGTGCGTGATGGGGCTCTGTCTACCTTGCATGATGCTTTTTTGAACCGCCTTGCACAATCTGGTGCAACTGAAAGTTCATGTACATATAATATTTGTAATAAGATGGAAGAGGATAGAGGAACTACCTTGGAAAATACTCAGAATATTTTAGGTAATATAGTAGCCGCAATTGACAATGTGTGGAATGTGAAGGATGCATTGCACAATGCCCTGTTGAAAGAGCTTCCTGAAAATGGCTTGTCTAGGCAGAGGGCATCCAATGATTTAAGAAATGAAGTTAAGAACTTGAGATTGGCATTCTGCGATAGTCTTCTGAAGCACAGAGGTCTGGCAAGGGAACTGCATAACCGCTGGGACATTGAATCAAAGAATAAAGCAGAGATTAAACGCCTGAAAGGGGAGTTGGAAACCACTCTTGGTGAATTAGAAGAGAATAATCGTCAACTAGCAATTCTAAAAGCAGAGAGGGATTCTACAAAAGGGGCAACTTTCCCTGTCTTAAATTTTCTGAACAAGCCTGTTGATAGGGCCAGAGATAAGCAAAAGGATCTGCAAGATATGGAGTCTACTCTCAAAGAGCTCACGGACCAAGCTTCATGTCGACTAATGGAAATCAAAAGCCTTCATGAAGAACGGATAAAAATATTACAGCAGTTATCTAGTTTGCAGAACATGATGAAGAATGCAAAGTGTATTTCCTCTTCCAAAGCATATCTATTGGTCAAAGATCAAATAGAAAAGTCGAAATCAGAAGTTTTTGAGTGCCAAACCATCATTGAGAAACTACAGGTTGAGAAGGATAATCTTGTGTGGAGGGAGAGGGAACTAAATGTTAAAAATGACATTGTTGATGTTTTGCGGAGATCAGCTGCAGTTGTTGATTCTAGAATTACTGATCTGGGTATAGAGATACAGAAACAGATTGACGAACAGAAAAGGATGGAAGCTAAGCTTGAAGAGGCTTCAAGAGAACCAGGAAGGAAAGAAGTACTTGAAGAATTTAAAGCCTTGGTTTCTTCGTTTCCTGAGCAAATGGGTGCCATGCAAGGTCAATTACGTAAATACAAAGAGGCTGCTTCTGATTTTCATTCTTTGCAGGCTGATGTGCAGTCCCTTTCCAGCATTCTTGATAGGAAGGTGAAAGAGTGTGAAACATTTTCTGCAAAATCCTCTGACCAACTCACTGAGATACAGCAGTTGAAAGCTGTGGTCCAAGATCTAAAGGACACGGAATCAGAGTTAAAGCTGTTTTTGGAAATGTATAGACATGAATTGAGTGACCCAAGGGATGTCATGGAAGCTAGAGATTTGGAGTGCAAGGCATGGGCTCATGTTGAATGTTTAAAATCATCTCTTGATGAACATAATTTAGAATTACGAGTTAAGAAAGCAAATGAAGCTGAGGCCACTTCTCAACAAAGGCTTGCTGCTGTAGAAGCTGAGATTGCTGACCTCAGACAGAGGCTTGAAGCTTCTAAAAGGAATAAGGTGAGACTTGCTGATGTTCTGAAATCCAAGACTGAAGAAAATGAGGCCTACTTGGCTGAAATTGAGACAATTGGACAAGCTTATGATGATATGCAAACTCAAAACCAGCATCTACTGCAGCAAATTACCGAGCGAGATGACTATAACATTAAGCTTGTTTTAGAGGGTGTGAGGGCAAGACAGACACAGAACGCTGTACTCATGGACAAACGTAAGATGGAGAGGGAAATTCAACAAGGCCATGCATCTCTTAATTTCTATGAGATGAAAGCTGCTCGGATCGAAGATCAGTTAAAAATATGCTCAGATCAACTTCAGAGACTAGCAGAACATAAGTTTCAAGGTGCAGTTCAACTGGAGAATACCCAGAAGAGGTTGATGGATGTGAGAAGGTCATCACAGCAAGCTCGGGATTCTCTAGAGGAATCACTGTCTAAAGTTGTTAAGGGTCGGTTGACTCTGTCCGAGATGCAGATAGAACTAGAGAAAGAAAGGCTTAAAAAGAAAAGAATAGAAGAGGAATTAGAAGCTTTGAAAAGAAAAGCCGGTCGGCTTCAAGCACAGACAGAGGGTTTGTCAATTGTTGAAAAACTTCAACAGGAACTTGGAGAATACCGGGAGATATTGAAGTGTGATATCTGCCTTGACAGAACAAAACAGGTTGTCATTACAAAATGCTATCACTTGTTCTGCAATCCCTGCGTGCAAAAAGTAGTTGAATCTCGCCAGAGGAAATGTCCGAAATGTTCCATCAGTTTTGGGCCAAATGACATAAAATCTGTGTACATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006325 GO:0006464 GO:0006513 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009814 GO:0009817 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010162 GO:0010228 GO:0010389 GO:0010390 GO:0010431 GO:0010564 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0016740 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022611 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033523 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051276 GO:0051301 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0051781 GO:0061458 GO:0065007 GO:0070647 GO:0071695 GO:0071704 GO:0071840 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901987 GO:1901990 GO:1902749 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

882

Amino Acids

101.13

Weight (kDa)

7.47

Isoelectric Point (pI)

52.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-C3HC4_3	PF13920	671 - 712	5.4e-07	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4_2	PF13923	672 - 711	9.1e-08	Zinc finger, C3HC4 type (RING finger)
zf-C3HC4	PF00097	673 - 711	1.8e-10	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44950 AT2G44950
fragaria_vesca	FvH4_7g09510 FvH4_7g09510 FvH4_7g09510
malus_domestica	MD02G1218200.v1.1 MD07G1098900.v1.1
prunus_persica	Prupe.2G122900_v2.0.a1
pyrus_communis	pycom07g08140 pycom12652g00010
rosa_chinensis	RchiOBHm_Chr1g0346311
rosa_laevigata	RLG00000028806
rosa_multiflora	Rmu_co8504721.1_g000001 Rmu_sc0003363.1_g000041
rosa_roxburghii	Rroxscaffold_4G00308720
rosa_rugosa	Rorug01G0179100
rosa_samantha	Rh1AG198500 Rh1BG164500 Rh1CG183800 Rh1DG195200
rosa_wichuraiana	Rw1G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	137, 362
AccB1I	GGYRCC	1 cut(s)	1403
AccI	GTMKAC	3 cut(s)	386, 932, 967
AciI	CCGC	4 cut(s)	412, 531, 715, 1225
AclWI	GGATC	3 cut(s)	245, 921, 2141
AcsI	RAATTY	3 cut(s)	868, 1364, 2082
AcuI	CTGAAG	3 cut(s)	701, 1908, 2153
AcyI	GRCGYC	1 cut(s)	34
AfaI	GTAC	5 cut(s)	197, 448, 1356, 2052, 2639
AfiI	CCNNNNNNNGG	3 cut(s)	599, 763, 2226
AgeI	ACCGGT	1 cut(s)	11
AjnI	CCWGG	1 cut(s)	1339
AjuI	GAANNNNNNNTTGG	6 cut(s)	641, 673, 752, 765, 784, 797
Alw21I	GWGCWC	2 cut(s)	11, 948
Alw26I	GTCTC	4 cut(s)	173, 1852, 1913, 2167
AlwI	GGATC	3 cut(s)	245, 921, 2141
Ama87I	CYCGRG	1 cut(s)	2262
AoxI	GGCC	6 cut(s)	219, 894, 1770, 1899, 2092, 2615
ApoI	RAATTY	3 cut(s)	868, 1364, 2082
ArsI	GACNNNNNNTTYG	2 cut(s)	2410, 2442
AsiGI	ACCGGT	1 cut(s)	11
Asp700I	GAANNNNTTC	1 cut(s)	2445
AspS9I	GGNCC	5 cut(s)	220, 894, 952, 1576, 2615
AsuC2I	CCSGG	1 cut(s)	2471
AsuHPI	GGTGA	4 cut(s)	26, 797, 1516, 1867
AvaI	CYCGRG	1 cut(s)	2262
AvaII	GGWCC	2 cut(s)	952, 1576
BaeI	ACNNNNGTAYC	2 cut(s)	1547, 1580
BanI	GGYRCC	1 cut(s)	1403
BanII	GRGCYC	3 cut(s)	382, 948, 1696
BarI	GAAGNNNNNNTAC	2 cut(s)	1051, 1083
BbsI	GAAGAC	1 cut(s)	668
Bbv12I	GWGCWC	2 cut(s)	11, 948
BbvCI	CCTCAGC	1 cut(s)	1767
BccI	CCATC	7 cut(s)	368, 463, 1145, 1300, 2065, 2227, 2612
BceAI	ACGGC	3 cut(s)	47, 78, 82
BcgI	CGANNNNNNTGC	2 cut(s)	182, 216
BciT130I	CCWGG	1 cut(s)	1341
BcnI	CCSGG	1 cut(s)	2471
BcoDI	GTCTC	4 cut(s)	173, 1852, 1913, 2167
BfaI	CTAG	8 cut(s)	609, 812, 1026, 1251, 1668, 2177, 2273, 2336
BfmI	CTRYAG	5 cut(s)	167, 1151, 1236, 1797, 1970
BglI	GCCNNNNNGGC	1 cut(s)	1907
BglII	AGATCT	1 cut(s)	1582
BlpI	GCTNAGC	1 cut(s)	1314
BmcAI	AGTACT	2 cut(s)	197, 1356
Bme1390I	CCNGG	2 cut(s)	1341, 2471
Bme18I	GGWCC	2 cut(s)	952, 1576
BmeT110I	CYCGRG	1 cut(s)	2262
BmgT120I	GGNCC	5 cut(s)	220, 894, 952, 1576, 2615
BmiI	GGNNCC	1 cut(s)	1405
BmrFI	CCNGG	2 cut(s)	1341, 2471
BmrI	ACTGGG	1 cut(s)	217
BmsI	GCATC	6 cut(s)	388, 550, 629, 1972, 2108, 2313
BmuI	ACTGGG	1 cut(s)	217
BpiI	GAAGAC	1 cut(s)	668
BpmI	CTGGAG	1 cut(s)	2231
Bpu10I	CCTNAGC	2 cut(s)	1392, 1767
Bpu1102I	GCTNAGC	1 cut(s)	1314
BpuEI	CTTGAG	2 cut(s)	227, 673
BpuMI	CCSGG	1 cut(s)	2471
BsaAI	YACGTR	1 cut(s)	1424
BsaHI	GRCGYC	1 cut(s)	34
BsaJI	CCNNGG	5 cut(s)	60, 114, 492, 1374, 1649
BsaWI	WCCGGW	2 cut(s)	11, 24
BsaXI	ACNNNNNCTCC	1 cut(s)	28
Bsc4I	CCNNNNNNNGG	3 cut(s)	599, 763, 2226
Bse118I	RCCGGY	2 cut(s)	11, 2399
Bse1I	ACTGG	2 cut(s)	223, 2214
Bse3DI	GCAATG	2 cut(s)	132, 563
BseBI	CCWGG	1 cut(s)	1341
BseDI	CCNNGG	5 cut(s)	60, 114, 492, 1374, 1649
BseGI	GGATG	5 cut(s)	565, 620, 1311, 1660, 2242
BseLI	CCNNNNNNNGG	3 cut(s)	599, 763, 2226
BseMI	GCAATG	2 cut(s)	132, 563
BseMII	CTCAG	7 cut(s)	518, 1383, 1542, 1758, 1797, 1834, 2172
BseNI	ACTGG	2 cut(s)	223, 2214
BseYI	CCCAGC	1 cut(s)	717
BsgI	GTGCAG	2 cut(s)	1493, 2220
Bsh1285I	CGRYCG	1 cut(s)	2404
BshFI	GGCC	6 cut(s)	221, 896, 1772, 1901, 2094, 2617
BshNI	GGYRCC	1 cut(s)	1403
BshTI	ACCGGT	1 cut(s)	11
BsiEI	CGRYCG	1 cut(s)	2404
BsiHKAI	GWGCWC	2 cut(s)	11, 948
BsiHKCI	CYCGRG	1 cut(s)	2262
BsiSI	CCGG	4 cut(s)	12, 25, 2400, 2470
BslFI	GGGAC	2 cut(s)	734, 1462
BslI	CCNNNNNNNGG	3 cut(s)	599, 763, 2226
BsmAI	GTCTC	4 cut(s)	173, 1852, 1913, 2167
BsmFI	GGGAC	2 cut(s)	734, 1462
BsmI	GAATGC	3 cut(s)	662, 1054, 1488
BsnI	GGCC	6 cut(s)	221, 896, 1772, 1901, 2094, 2617
BsoBI	CYCGRG	1 cut(s)	2262
Bsp1286I	GDGCHC	4 cut(s)	11, 382, 948, 1696
Bsp1407I	TGTACA	2 cut(s)	446, 2637
Bsp143I	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
Bsp1720I	GCTNAGC	1 cut(s)	1314
BspACI	CCGC	4 cut(s)	412, 531, 715, 1225
BspANI	GGCC	6 cut(s)	221, 896, 1772, 1901, 2094, 2617
BspCNI	CTCAG	7 cut(s)	517, 1384, 1543, 1759, 1798, 1833, 2171
BspHI	TCATGA	1 cut(s)	991
BspLI	GGNNCC	1 cut(s)	1405
BspMAI	CTGCAG	2 cut(s)	1240, 1974
BspPI	GGATC	3 cut(s)	245, 921, 2141
BspT107I	GGYRCC	1 cut(s)	1403
BsrDI	GCAATG	2 cut(s)	132, 563
BsrFI	RCCGGY	2 cut(s)	11, 2399
BsrGI	TGTACA	2 cut(s)	446, 2637
BsrI	ACTGG	2 cut(s)	223, 2214
BssAI	RCCGGY	2 cut(s)	11, 2399
BssECI	CCNNGG	5 cut(s)	60, 114, 492, 1374, 1649
BssMI	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
BssNI	GRCGYC	1 cut(s)	34
BssT1I	CCWWGG	3 cut(s)	492, 1374, 1649
Bst2UI	CCWGG	1 cut(s)	1341
Bst4CI	ACNGT	1 cut(s)	2286
Bst6I	CTCTTC	6 cut(s)	468, 789, 1072, 1317, 2219, 2364
BstACI	GRCGYC	1 cut(s)	34
BstAPI	GCANNNNNTGC	2 cut(s)	1969, 2553
BstAUI	TGTACA	2 cut(s)	446, 2637
BstBAI	YACGTR	1 cut(s)	1424
BstC8I	GCNNGC	4 cut(s)	1464, 1791, 2259, 2558
BstDEI	CTNAG	9 cut(s)	87, 504, 1314, 1392, 1551, 1767, 1806, 1820, 2158
BstDSI	CCRYGG	1 cut(s)	60
BstF5I	GGATG	5 cut(s)	565, 620, 1311, 1660, 2242
BstKTI	GATC	9 cut(s)	253, 916, 1096, 1232, 1264, 1585, 2136, 2143, 2164
BstMAI	GTCTC	4 cut(s)	173, 1852, 1913, 2167
BstMBI	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
BstMCI	CGRYCG	1 cut(s)	2404
BstNI	CCWGG	1 cut(s)	1341
BstSCI	CCNGG	2 cut(s)	1339, 2469
BstSFI	CTRYAG	5 cut(s)	167, 1151, 1236, 1797, 1970
BstSNI	TACGTA	1 cut(s)	1424
BstV2I	GAAGAC	1 cut(s)	668
BstX2I	RGATCY	2 cut(s)	913, 1582
BstXI	CCANNNNNNTGG	1 cut(s)	262
BstYI	RGATCY	2 cut(s)	913, 1582
BsuRI	GGCC	6 cut(s)	221, 896, 1772, 1901, 2094, 2617
BtgI	CCRYGG	1 cut(s)	60
BtsCI	GGATG	5 cut(s)	565, 620, 1311, 1660, 2242
BtsIMutI	CAGTG	2 cut(s)	1548, 2282
Cac8I	GCNNGC	4 cut(s)	1464, 1791, 2259, 2558
CciI	TCATGA	1 cut(s)	991
Cfr10I	RCCGGY	2 cut(s)	11, 2399
Cfr13I	GGNCC	5 cut(s)	220, 894, 952, 1576, 2615
CseI	GACGC	1 cut(s)	23
Csp6I	GTAC	5 cut(s)	196, 447, 1355, 2051, 2638
CspAI	ACCGGT	1 cut(s)	11
CviQI	GTAC	5 cut(s)	196, 447, 1355, 2051, 2638
DdeI	CTNAG	9 cut(s)	87, 504, 1314, 1392, 1551, 1767, 1806, 1820, 2158
DpnI	GATC	9 cut(s)	252, 915, 1095, 1231, 1263, 1584, 2135, 2142, 2163
DpnII	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
DraI	TTTAAA	2 cut(s)	1369, 1710
DrdI	GACNNNNNNGTC	2 cut(s)	137, 362
DseDI	GACNNNNNNGTC	2 cut(s)	137, 362
Eam1104I	CTCTTC	6 cut(s)	468, 789, 1072, 1317, 2219, 2364
EarI	CTCTTC	6 cut(s)	468, 789, 1072, 1317, 2219, 2364
Ecl136II	GAGCTC	1 cut(s)	946
Eco105I	TACGTA	1 cut(s)	1424
Eco130I	CCWWGG	3 cut(s)	492, 1374, 1649
Eco147I	AGGCCT	1 cut(s)	1901
Eco24I	GRGCYC	3 cut(s)	382, 948, 1696
Eco32I	GATATC	1 cut(s)	2491
Eco47I	GGWCC	2 cut(s)	952, 1576
Eco53kI	GAGCTC	1 cut(s)	946
Eco57I	CTGAAG	3 cut(s)	701, 1908, 2153
Eco88I	CYCGRG	1 cut(s)	2262
EcoICRI	GAGCTC	1 cut(s)	946
EcoRII	CCWGG	1 cut(s)	1339
EcoRV	GATATC	1 cut(s)	2491
EcoT14I	CCWWGG	3 cut(s)	492, 1374, 1649
EcoT22I	ATGCAT	2 cut(s)	565, 2101
EcoT38I	GRGCYC	3 cut(s)	382, 948, 1696
ErhI	CCWWGG	3 cut(s)	492, 1374, 1649
FalI	AAGNNNNNCTT	8 cut(s)	345, 377, 1302, 1334, 1341, 1373, 2334, 2366
FaqI	GGGAC	2 cut(s)	734, 1462
FauNDI	CATATG	1 cut(s)	247
FblI	GTMKAC	3 cut(s)	386, 932, 967
FokI	GGATG	5 cut(s)	572, 607, 1318, 1667, 2249
FriOI	GRGCYC	3 cut(s)	382, 948, 1696
FspBI	CTAG	8 cut(s)	609, 812, 1026, 1251, 1668, 2177, 2273, 2336
GsaI	CCCAGC	1 cut(s)	721
GsuI	CTGGAG	1 cut(s)	2231
HaeIII	GGCC	6 cut(s)	221, 896, 1772, 1901, 2094, 2617
HapII	CCGG	4 cut(s)	12, 25, 2400, 2470
HgaI	GACGC	1 cut(s)	23
Hin1I	GRCGYC	1 cut(s)	34
HincII	GTYRAC	5 cut(s)	271, 333, 809, 968, 2310
HindII	GTYRAC	5 cut(s)	271, 333, 809, 968, 2310
HindIII	AAGCTT	7 cut(s)	125, 957, 1316, 1836, 1932, 2006, 2382
HpaII	CCGG	4 cut(s)	12, 25, 2400, 2470
HphI	GGTGA	4 cut(s)	26, 797, 1516, 1867
Hpy166II	GTNNAC	8 cut(s)	271, 333, 387, 809, 933, 968, 2310, 2638
Hpy8I	GTNNAC	8 cut(s)	271, 333, 387, 809, 933, 968, 2310, 2638
Hpy99I	CGWCG	1 cut(s)	58
HpyAV	CCTTC	7 cut(s)	152, 550, 998, 1156, 1338, 1495, 2238
HpyCH4III	ACNGT	1 cut(s)	2286
HpyCH4IV	ACGT	2 cut(s)	1423, 2065
HpyF3I	CTNAG	9 cut(s)	87, 504, 1314, 1392, 1551, 1767, 1806, 1820, 2158
HpySE526I	ACGT	2 cut(s)	1423, 2065
Hsp92I	GRCGYC	1 cut(s)	34
Kzo9I	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
LmnI	GCTCC	2 cut(s)	6, 50
LweI	GCATC	6 cut(s)	388, 550, 629, 1972, 2108, 2313
MaeI	CTAG	8 cut(s)	609, 812, 1026, 1251, 1668, 2177, 2273, 2336
MaeII	ACGT	2 cut(s)	1423, 2065
MaeIII	GTNAC	1 cut(s)	1643
MalI	GATC	9 cut(s)	252, 915, 1095, 1231, 1263, 1584, 2135, 2142, 2163
MboI	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
MfeI	CAATTG	3 cut(s)	534, 1923, 2433
MflI	RGATCY	2 cut(s)	913, 1582
MhlI	GDGCHC	4 cut(s)	11, 382, 948, 1696
MlyI	GAGTC	3 cut(s)	175, 938, 2305
MmeI	TCCRAC	1 cut(s)	750
Mph1103I	ATGCAT	2 cut(s)	565, 2101
MroXI	GAANNNNTTC	1 cut(s)	2445
MslI	CAYNNNNRTG	1 cut(s)	260
MspA1I	CMGCKG	2 cut(s)	717, 1235
MspI	CCGG	4 cut(s)	12, 25, 2400, 2470
MspR9I	CCNGG	2 cut(s)	1341, 2471
MunI	CAATTG	3 cut(s)	534, 1923, 2433
Mva1269I	GAATGC	3 cut(s)	662, 1054, 1488
MvaI	CCWGG	1 cut(s)	1341
NciI	CCSGG	1 cut(s)	2471
NdeI	CATATG	1 cut(s)	247
NdeII	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
NlaIV	GGNNCC	1 cut(s)	1405
NmuCI	GTSAC	1 cut(s)	1643
NsiI	ATGCAT	2 cut(s)	565, 2101
PagI	TCATGA	1 cut(s)	991
PceI	AGGCCT	1 cut(s)	1901
PctI	GAATGC	3 cut(s)	662, 1054, 1488
PdmI	GAANNNNTTC	1 cut(s)	2445
PfeI	GAWTC	8 cut(s)	305, 728, 836, 1247, 1598, 2267, 2279, 2573
PflFI	GACNNNGTC	1 cut(s)	2314
PinAI	ACCGGT	1 cut(s)	11
PleI	GAGTC	3 cut(s)	175, 937, 2305
PpsI	GAGTC	3 cut(s)	175, 937, 2305
Ppu21I	YACGTR	1 cut(s)	1424
Psp124BI	GAGCTC	1 cut(s)	948
Psp6I	CCWGG	1 cut(s)	1339
PspFI	CCCAGC	1 cut(s)	717
PspGI	CCWGG	1 cut(s)	1339
PspN4I	GGNNCC	1 cut(s)	1405
PspPI	GGNCC	5 cut(s)	220, 894, 952, 1576, 2615
PstI	CTGCAG	2 cut(s)	1240, 1974
PsuI	RGATCY	2 cut(s)	913, 1582
PsyI	GACNNNGTC	1 cut(s)	2314
PvuII	CAGCTG	1 cut(s)	1235
RsaI	GTAC	5 cut(s)	197, 448, 1356, 2052, 2639
RsaNI	GTAC	5 cut(s)	196, 447, 1355, 2051, 2638
RseI	CAYNNNNRTG	1 cut(s)	260
SacI	GAGCTC	1 cut(s)	948
SalI	GTCGAC	1 cut(s)	966
Sau3AI	GATC	9 cut(s)	250, 913, 1093, 1229, 1261, 1582, 2133, 2140, 2161
Sau96I	GGNCC	5 cut(s)	220, 894, 952, 1576, 2615
ScaI	AGTACT	2 cut(s)	197, 1356
SchI	GAGTC	3 cut(s)	175, 938, 2305
ScrFI	CCNGG	2 cut(s)	1341, 2471
SduI	GDGCHC	4 cut(s)	11, 382, 948, 1696
SfaNI	GCATC	6 cut(s)	388, 550, 629, 1972, 2108, 2313
SfcI	CTRYAG	5 cut(s)	167, 1151, 1236, 1797, 1970
SgrAI	CRCCGGYG	1 cut(s)	11
SinI	GGWCC	2 cut(s)	952, 1576
SmiMI	CAYNNNNRTG	1 cut(s)	260
SmlI	CTYRAG	2 cut(s)	206, 652
SmoI	CTYRAG	2 cut(s)	206, 652
SnaBI	TACGTA	1 cut(s)	1424
SseBI	AGGCCT	1 cut(s)	1901
SsiI	CCGC	4 cut(s)	412, 531, 715, 1225
SspI	AATATT	3 cut(s)	457, 511, 1011
SspMI	CTAG	8 cut(s)	609, 812, 1026, 1251, 1668, 2177, 2273, 2336
SstI	GAGCTC	1 cut(s)	948
StuI	AGGCCT	1 cut(s)	1901
StyD4I	CCNGG	2 cut(s)	1339, 2469
StyI	CCWWGG	3 cut(s)	492, 1374, 1649
TaaI	ACNGT	1 cut(s)	2286
TaiI	ACGT	2 cut(s)	1426, 2068
TaqI	TCGA	4 cut(s)	192, 967, 1109, 2136
TatI	WGTACW	5 cut(s)	195, 446, 1354, 2050, 2637
TauI	GCSGC	1 cut(s)	533
TfiI	GAWTC	8 cut(s)	305, 728, 836, 1247, 1598, 2267, 2279, 2573
TscAI	CASTG	2 cut(s)	1555, 2289
TseFI	GTSAC	1 cut(s)	1643
Tsp45I	GTSAC	1 cut(s)	1643
TspGWI	ACGGA	4 cut(s)	308, 965, 1015, 1610
TspRI	CASTG	2 cut(s)	1555, 2289
Tth111I	GACNNNGTC	1 cut(s)	2314
VpaK11BI	GGWCC	2 cut(s)	952, 1576
XapI	RAATTY	3 cut(s)	868, 1364, 2082
XbaI	TCTAGA	2 cut(s)	1250, 2272
XcmI	CCANNNNNNNNNTGG	1 cut(s)	262
XmiI	GTMKAC	3 cut(s)	386, 932, 967
XmnI	GAANNNNTTC	1 cut(s)	2445
XspI	CTAG	8 cut(s)	609, 812, 1026, 1251, 1668, 2177, 2273, 2336
ZrmI	AGTACT	2 cut(s)	197, 1356
Zsp2I	ATGCAT	2 cut(s)	565, 2101

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.