Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0010494

Physical Location & Seq

Genomic Coordinates Forward (+)

24617895 .. 24619775

Gene Structure 1881 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0179100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1437 bp

ATGAAGCAATCGGCAGAGCTAGTGTTCATCCCATCCCCAGGCATTGGCCACCTCGTGGCTACGGTGGAGGTCGCAAAGCTCCTCCTGTCTCGAGATGATCAACTCTTCATCACCGTCCTCATCATAAAGTTCCCGTTCAGCTTAGACGGCACCGATGCCTACGTTGAGTCCTTCGCGGACTCTTCCATATCACATCGAATCAAGTTCATCAACCTCCCACAGCAGAATATGGAGACACAAGGTAATAGCACCATCAACTTCTTGAACTTCATTGACAATCAGCAAACCAACGTTAAAGATGTTGTCGCCAAACTCATCGAGTCCGAGAACAAGAATCGACTCGCCGGGTTTGTCATCGACATGTTTTGTACCTCTATGATCGACATAGCCAACGAATTAGGGGTTCCTACCTACATGTTTTTCACATCCCCCGCCTCCATGCTCGGGCTCATGTTCCACCTTCAAGCACTTCGTGATGATCACAACAAGGACTGCATTGAATTCAAGGACTCAACTGCTGATTTGGTGGTCTCGAGTTACTCCAACCCCTTGCCAATTGCTAGAATTTTACCTAGTTTCCTTTTCGAAAAGGAGACCGGTAACAGGTCCCTCAACTTGGCCAAAAGGTTTAGAGATGTCAAGGGTATTTTGATAAATACATTCACAGAGCTGGAGTCGCATGCCCTTCTTTCTCTCAGTTCCGATGGTAAGATCCCTCCGGTGTATCCGGCGGGACCCATACTAAACGTGAAGAGCGATGACAACAATGACCAAGTGGATTCGAAGCAGTCGAAGCAAAAGTCTGATATCTTGAAATGGCTCGATGATCAGCCTCCGTCGTCTGTAGTGTTTTTGTGCTTCGGGAGTATGGGAAGCTTCAGTGAAGACCAGGTGAAAGAGATTGCCTGCGCATTGGAGCATGCAGGGTTTCGGTTCTTGTGGTCCCTACGTCAGCCTCCACCAAAGGGAAAGATTGGAATGCCCAGCGACTATGCCGATCACACAGGGGTGTTACCTGAAGGGTTTCTTGATCGAACGGCTGGGGTCGGAAAAGTTATAGGGTGGGCGCCACAAGTTGCCATATTAGCCCACCCGGCAGTCGGAGGTTTTGTCTCTCACTGTGGGTGGAATTCCACTCTGGAGAGCTTGTGGTTTGGAGTGCCGGTTGCCACGTGGCCCTTGTATGCCGAGCAACAAGCAAATGCATTTCAGCTAGTTACGGAACTAGGGATAGCCGTGGAAATTGATATGAGTTATAGGAAGGATGGTCTAGTTGTTGTGACTGCAGAGAAGATTGAGAGTGGAATAAAGGAGTTAATGGAGCTTGATAGTGATGTAAGGAAGAGGGTGAAACAGATGAGTGATAGTAGCAAGAAAGCTTTGATAGATGGGGGGTCCTCATATGATGCGTTGGGACACTTCATTGATCAAATTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006325 GO:0006464 GO:0006513 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009814 GO:0009817 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010162 GO:0010228 GO:0010389 GO:0010390 GO:0010431 GO:0010564 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0016740 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022611 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033523 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051276 GO:0051301 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0051781 GO:0061458 GO:0065007 GO:0070647 GO:0071695 GO:0071704 GO:0071840 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901987 GO:1901990 GO:1902749 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

478

Amino Acids

52.75

Weight (kDa)

5.11

Isoelectric Point (pI)

47.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UDPGT	PF00201	261 - 418	8.9e-24	UDP-glucoronosyl and UDP-glucosyl transferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44950 AT2G44950
fragaria_vesca	FvH4_7g09510 FvH4_7g09510 FvH4_7g09510
malus_domestica	MD02G1218200.v1.1 MD07G1098900.v1.1
prunus_persica	Prupe.2G122900_v2.0.a1
pyrus_communis	pycom07g08140 pycom12652g00010
rosa_chinensis	RchiOBHm_Chr1g0346311
rosa_laevigata	RLG00000028806
rosa_multiflora	Rmu_co8504721.1_g000001 Rmu_sc0003363.1_g000041
rosa_roxburghii	Rroxscaffold_4G00308720
rosa_rugosa	Rorug01G0179100
rosa_samantha	Rh1AG198500 Rh1BG164500 Rh1CG183800 Rh1DG195200
rosa_wichuraiana	Rw1G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	910
AccB1I	GGYRCC	2 cut(s)	149, 1066
AccB7I	CCANNNNNTGG	2 cut(s)	44, 55
AccII	CGCG	1 cut(s)	176
AciI	CCGC	3 cut(s)	176, 432, 731
AclI	AACGTT	1 cut(s)	291
AclWI	GGATC	1 cut(s)	706
AcoI	YGGCCR	2 cut(s)	46, 618
AcsI	RAATTY	4 cut(s)	500, 564, 1129, 1431
AcuI	CTGAAG	2 cut(s)	862, 1038
AcvI	CACGTG	1 cut(s)	1173
AcyI	GRCGYC	1 cut(s)	1067
AdeI	CACNNNGTG	2 cut(s)	55, 473
AfaI	GTAC	1 cut(s)	370
AfiI	CCNNNNNNNGG	8 cut(s)	38, 44, 55, 444, 603, 616, 965, 1100
AflIII	ACRYGT	2 cut(s)	360, 414
AgeI	ACCGGT	1 cut(s)	596
AgsI	TTSAA	5 cut(s)	265, 464, 500, 505, 814
AjnI	CCWGG	2 cut(s)	37, 888
AleI	CACNNNNGTG	1 cut(s)	1007
AluBI	AGCT	9 cut(s)	19, 79, 141, 670, 876, 1146, 1213, 1324, 1379
AluI	AGCT	9 cut(s)	19, 79, 141, 670, 876, 1146, 1213, 1324, 1379
Alw26I	GTCTC	5 cut(s)	93, 227, 535, 587, 1117
AlwI	GGATC	1 cut(s)	706
Ama87I	CYCGRG	3 cut(s)	90, 443, 532
AoxI	GGCC	3 cut(s)	46, 618, 1175
ApoI	RAATTY	4 cut(s)	500, 564, 1129, 1431
ArsI	GACNNNNNNTTYG	2 cut(s)	785, 817
AsiGI	ACCGGT	1 cut(s)	596
Asp700I	GAANNNNTTC	1 cut(s)	1023
AspLEI	GCGC	2 cut(s)	911, 1069
AspS9I	GGNCC	5 cut(s)	606, 734, 942, 1176, 1395
AsuC2I	CCSGG	2 cut(s)	346, 1094
AsuHPI	GGTGA	3 cut(s)	103, 904, 1360
AsuII	TTCGAA	2 cut(s)	585, 782
AvaI	CYCGRG	3 cut(s)	90, 443, 532
AvaII	GGWCC	4 cut(s)	606, 734, 942, 1395
BalI	TGGCCA	2 cut(s)	48, 620
BanI	GGYRCC	2 cut(s)	149, 1066
BanII	GRGCYC	1 cut(s)	450
BauI	CACGAG	1 cut(s)	53
BbrPI	CACGTG	1 cut(s)	1173
BbsI	GAAGAC	1 cut(s)	891
BccI	CCATC	5 cut(s)	40, 260, 698, 1259, 1382
BceAI	ACGGC	3 cut(s)	163, 1053, 1220
BciT130I	CCWGG	2 cut(s)	39, 890
BciVI	GTATCC	1 cut(s)	735
BclI	TGATCA	4 cut(s)	97, 478, 826, 1426
BcnI	CCSGG	2 cut(s)	346, 1094
BcoDI	GTCTC	5 cut(s)	93, 227, 535, 587, 1117
BfaI	CTAG	6 cut(s)	20, 561, 573, 1214, 1226, 1271
BfmI	CTRYAG	2 cut(s)	843, 1284
BfoI	RGCGCY	1 cut(s)	1070
BfuI	GTATCC	1 cut(s)	735
BglI	GCCNNNNNGGC	1 cut(s)	1094
Bme1390I	CCNGG	4 cut(s)	39, 346, 890, 1094
Bme18I	GGWCC	4 cut(s)	606, 734, 942, 1395
BmeT110I	CYCGRG	3 cut(s)	90, 443, 532
BmgT120I	GGNCC	5 cut(s)	606, 734, 942, 1176, 1395
BmiI	GGNNCC	8 cut(s)	151, 405, 608, 735, 736, 944, 1068, 1396
BmrFI	CCNGG	4 cut(s)	39, 346, 890, 1094
BmsI	GCATC	2 cut(s)	145, 1396
BpiI	GAAGAC	1 cut(s)	891
BpmI	CTGGAG	2 cut(s)	692, 1160
Bpu14I	TTCGAA	2 cut(s)	585, 782
BpuMI	CCSGG	2 cut(s)	346, 1094
BsaAI	YACGTR	1 cut(s)	1173
BsaHI	GRCGYC	1 cut(s)	1067
BsaI	GGTCTC	2 cut(s)	535, 587
BsaJI	CCNNGG	2 cut(s)	37, 1236
BsaWI	WCCGGW	2 cut(s)	596, 718
BsaXI	ACNNNNNCTCC	6 cut(s)	1095, 1125, 1133, 1149, 1163, 1179
Bsc4I	CCNNNNNNNGG	8 cut(s)	38, 44, 55, 444, 603, 616, 965, 1100
Bse118I	RCCGGY	2 cut(s)	596, 1162
BseBI	CCWGG	2 cut(s)	39, 890
BseDI	CCNNGG	2 cut(s)	37, 1236
BseGI	GGATG	4 cut(s)	27, 32, 425, 1270
BseLI	CCNNNNNNNGG	8 cut(s)	38, 44, 55, 444, 603, 616, 965, 1100
BseMII	CTCAG	1 cut(s)	709
BseRI	GAGGAG	1 cut(s)	71
BseYI	CCCAGC	2 cut(s)	983, 1040
Bsh1236I	CGCG	1 cut(s)	176
BshFI	GGCC	3 cut(s)	48, 620, 1177
BshNI	GGYRCC	2 cut(s)	149, 1066
BshTI	ACCGGT	1 cut(s)	596
BsiHKCI	CYCGRG	3 cut(s)	90, 443, 532
BsiSI	CCGG	6 cut(s)	345, 597, 719, 728, 1094, 1163
BslFI	GGGAC	4 cut(s)	592, 747, 928, 1428
BslI	CCNNNNNNNGG	8 cut(s)	38, 44, 55, 444, 603, 616, 965, 1100
BsmAI	GTCTC	5 cut(s)	93, 227, 535, 587, 1117
BsmFI	GGGAC	4 cut(s)	592, 747, 928, 1428
BsmI	GAATGC	1 cut(s)	984
BsnI	GGCC	3 cut(s)	48, 620, 1177
Bso31I	GGTCTC	2 cut(s)	535, 587
BsoBI	CYCGRG	3 cut(s)	90, 443, 532
Bsp119I	TTCGAA	2 cut(s)	585, 782
Bsp1286I	GDGCHC	1 cut(s)	450
Bsp143I	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
BspACI	CCGC	3 cut(s)	176, 432, 731
BspANI	GGCC	3 cut(s)	48, 620, 1177
BspCNI	CTCAG	1 cut(s)	708
BspFNI	CGCG	1 cut(s)	176
BspLI	GGNNCC	8 cut(s)	151, 405, 608, 735, 736, 944, 1068, 1396
BspMAI	CTGCAG	1 cut(s)	1288
BspPI	GGATC	1 cut(s)	706
BspQI	GCTCTTC	1 cut(s)	746
BspT104I	TTCGAA	2 cut(s)	585, 782
BspT107I	GGYRCC	2 cut(s)	149, 1066
BspTNI	GGTCTC	2 cut(s)	535, 587
BsrFI	RCCGGY	2 cut(s)	596, 1162
BssAI	RCCGGY	2 cut(s)	596, 1162
BssECI	CCNNGG	2 cut(s)	37, 1236
BssMI	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
BssNI	GRCGYC	1 cut(s)	1067
BssSI	CACGAG	1 cut(s)	53
Bst2BI	CACGAG	1 cut(s)	53
Bst2UI	CCWGG	2 cut(s)	39, 890
Bst4CI	ACNGT	3 cut(s)	64, 115, 1121
Bst6I	CTCTTC	4 cut(s)	110, 187, 746, 1337
BstACI	GRCGYC	1 cut(s)	1067
BstBAI	YACGTR	1 cut(s)	1173
BstBI	TTCGAA	2 cut(s)	585, 782
BstC8I	GCNNGC	3 cut(s)	681, 907, 921
BstDEI	CTNAG	2 cut(s)	142, 695
BstDSI	CCRYGG	1 cut(s)	1236
BstF5I	GGATG	4 cut(s)	27, 32, 425, 1270
BstFNI	CGCG	1 cut(s)	176
BstH2I	RGCGCY	1 cut(s)	1070
BstHHI	GCGC	2 cut(s)	911, 1069
BstKTI	GATC	8 cut(s)	100, 381, 481, 714, 829, 1000, 1033, 1429
BstMAI	GTCTC	5 cut(s)	93, 227, 535, 587, 1117
BstMBI	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
BstMWI	GCNNNNNNNGC	5 cut(s)	147, 676, 793, 1085, 1094
BstNI	CCWGG	2 cut(s)	39, 890
BstNSI	RCATGY	4 cut(s)	364, 418, 683, 923
BstSCI	CCNGG	4 cut(s)	37, 344, 888, 1092
BstSFI	CTRYAG	2 cut(s)	843, 1284
BstUI	CGCG	1 cut(s)	176
BstV2I	GAAGAC	1 cut(s)	891
BstX2I	RGATCY	1 cut(s)	711
BstYI	RGATCY	1 cut(s)	711
BsuI	GTATCC	1 cut(s)	735
BsuRI	GGCC	3 cut(s)	48, 620, 1177
BtgI	CCRYGG	1 cut(s)	1236
BtgZI	GCGATG	1 cut(s)	771
BtsCI	GGATG	4 cut(s)	27, 32, 425, 1270
BtsIMutI	CAGTG	2 cut(s)	886, 1117
Cac8I	GCNNGC	3 cut(s)	681, 907, 921
CfoI	GCGC	2 cut(s)	911, 1069
Cfr10I	RCCGGY	2 cut(s)	596, 1162
Cfr13I	GGNCC	5 cut(s)	606, 734, 942, 1176, 1395
CsiI	ACCWGGT	1 cut(s)	888
Csp6I	GTAC	1 cut(s)	369
CspAI	ACCGGT	1 cut(s)	596
CviAII	CATG	6 cut(s)	361, 415, 439, 451, 680, 920
CviQI	GTAC	1 cut(s)	369
DdeI	CTNAG	2 cut(s)	142, 695
DinI	GGCGCC	1 cut(s)	1068
DpnI	GATC	8 cut(s)	99, 380, 480, 713, 828, 999, 1032, 1428
DpnII	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
DraIII	CACNNNGTG	2 cut(s)	55, 473
EaeI	YGGCCR	2 cut(s)	46, 618
Eam1104I	CTCTTC	4 cut(s)	110, 187, 746, 1337
EarI	CTCTTC	4 cut(s)	110, 187, 746, 1337
Eco24I	GRGCYC	1 cut(s)	450
Eco31I	GGTCTC	2 cut(s)	535, 587
Eco32I	GATATC	1 cut(s)	808
Eco47I	GGWCC	4 cut(s)	606, 734, 942, 1395
Eco57I	CTGAAG	2 cut(s)	862, 1038
Eco72I	CACGTG	1 cut(s)	1173
Eco88I	CYCGRG	3 cut(s)	90, 443, 532
EcoO109I	RGGNCCY	3 cut(s)	606, 734, 1395
EcoRI	GAATTC	2 cut(s)	500, 1129
EcoRII	CCWGG	2 cut(s)	37, 888
EcoRV	GATATC	1 cut(s)	808
EcoT22I	ATGCAT	1 cut(s)	1207
EcoT38I	GRGCYC	1 cut(s)	450
EgeI	GGCGCC	1 cut(s)	1068
EheI	GGCGCC	1 cut(s)	1068
FaeI	CATG	6 cut(s)	364, 418, 442, 454, 683, 923
FalI	AAGNNNNNCTT	2 cut(s)	1011, 1043
FaqI	GGGAC	4 cut(s)	592, 747, 928, 1428
FatI	CATG	6 cut(s)	360, 414, 438, 450, 679, 919
FauI	CCCGC	2 cut(s)	439, 724
FauNDI	CATATG	1 cut(s)	1402
FbaI	TGATCA	4 cut(s)	97, 478, 826, 1426
FokI	GGATG	4 cut(s)	14, 19, 412, 1277
FriOI	GRGCYC	1 cut(s)	450
FspBI	CTAG	6 cut(s)	20, 561, 573, 1214, 1226, 1271
FspI	TGCGCA	1 cut(s)	910
GlaI	GCGC	2 cut(s)	910, 1068
GsaI	CCCAGC	2 cut(s)	987, 1044
GsuI	CTGGAG	2 cut(s)	692, 1160
HaeII	RGCGCY	1 cut(s)	1070
HaeIII	GGCC	3 cut(s)	48, 620, 1177
HapII	CCGG	6 cut(s)	345, 597, 719, 728, 1094, 1163
HhaI	GCGC	2 cut(s)	911, 1069
Hin1I	GRCGYC	1 cut(s)	1067
Hin1II	CATG	6 cut(s)	364, 418, 442, 454, 683, 923
Hin6I	GCGC	2 cut(s)	909, 1067
HinP1I	GCGC	2 cut(s)	909, 1067
HindIII	AAGCTT	2 cut(s)	874, 1377
HinfI	GANTC	9 cut(s)	167, 179, 198, 320, 334, 339, 509, 674, 779
HpaII	CCGG	6 cut(s)	345, 597, 719, 728, 1094, 1163
HphI	GGTGA	3 cut(s)	103, 904, 1360
Hpy188I	TCNGA	5 cut(s)	325, 703, 805, 1049, 1103
Hpy188III	TCNNGA	9 cut(s)	90, 92, 262, 473, 532, 811, 862, 1028, 1139
Hpy99I	CGWCG	1 cut(s)	841
HpyAV	CCTTC	5 cut(s)	181, 470, 695, 1013, 1255
HpyCH4III	ACNGT	3 cut(s)	64, 115, 1121
HpyCH4IV	ACGT	5 cut(s)	162, 291, 747, 949, 1172
HpyCH4V	TGCA	4 cut(s)	495, 923, 1205, 1286
HpyF10VI	GCNNNNNNNGC	5 cut(s)	147, 676, 793, 1085, 1094
HpyF3I	CTNAG	2 cut(s)	142, 695
HpySE526I	ACGT	5 cut(s)	162, 291, 747, 949, 1172
Hsp92I	GRCGYC	1 cut(s)	1067
Hsp92II	CATG	6 cut(s)	364, 418, 442, 454, 683, 923
HspAI	GCGC	2 cut(s)	909, 1067
KasI	GGCGCC	1 cut(s)	1066
KflI	GGGWCCC	1 cut(s)	734
Ksp22I	TGATCA	4 cut(s)	97, 478, 826, 1426
Kzo9I	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
LguI	GCTCTTC	1 cut(s)	746
LmnI	GCTCC	3 cut(s)	84, 916, 1321
LweI	GCATC	2 cut(s)	145, 1396
MabI	ACCWGGT	1 cut(s)	888
MaeI	CTAG	6 cut(s)	20, 561, 573, 1214, 1226, 1271
MaeII	ACGT	5 cut(s)	162, 291, 747, 949, 1172
MaeIII	GTNAC	5 cut(s)	536, 599, 1011, 1216, 1279
MalI	GATC	8 cut(s)	99, 380, 480, 713, 828, 999, 1032, 1428
MboI	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
MboII	GAAGA	6 cut(s)	97, 174, 763, 896, 1303, 1354
MfeI	CAATTG	1 cut(s)	555
MflI	RGATCY	1 cut(s)	711
MhlI	GDGCHC	1 cut(s)	450
MlsI	TGGCCA	2 cut(s)	48, 620
MluCI	AATT	7 cut(s)	395, 500, 555, 564, 1129, 1242, 1431
MluNI	TGGCCA	2 cut(s)	48, 620
Mly113I	GGCGCC	1 cut(s)	1067
MlyI	GAGTC	6 cut(s)	173, 176, 329, 333, 503, 683
MmeI	TCCRAC	3 cut(s)	567, 1027, 1081
Mox20I	TGGCCA	2 cut(s)	48, 620
Mph1103I	ATGCAT	1 cut(s)	1207
MroXI	GAANNNNTTC	1 cut(s)	1023
MscI	TGGCCA	2 cut(s)	48, 620
MseI	TTAA	3 cut(s)	294, 1316, 1435
MslI	CAYNNNNRTG	2 cut(s)	359, 1007
Msp20I	TGGCCA	2 cut(s)	48, 620
MspI	CCGG	6 cut(s)	345, 597, 719, 728, 1094, 1163
MspR9I	CCNGG	4 cut(s)	39, 346, 890, 1094
MunI	CAATTG	1 cut(s)	555
Mva1269I	GAATGC	1 cut(s)	984
MvaI	CCWGG	2 cut(s)	39, 890
MvnI	CGCG	1 cut(s)	176
MwoI	GCNNNNNNNGC	5 cut(s)	147, 676, 793, 1085, 1094
NarI	GGCGCC	1 cut(s)	1067
NciI	CCSGG	2 cut(s)	346, 1094
NdeI	CATATG	1 cut(s)	1402
NdeII	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
NlaIII	CATG	6 cut(s)	364, 418, 442, 454, 683, 923
NlaIV	GGNNCC	8 cut(s)	151, 405, 608, 735, 736, 944, 1068, 1396
NmeAIII	GCCGAG	1 cut(s)	1213
NmuCI	GTSAC	1 cut(s)	1279
NsbI	TGCGCA	1 cut(s)	910
NsiI	ATGCAT	1 cut(s)	1207
NspI	RCATGY	4 cut(s)	364, 418, 683, 923
NspV	TTCGAA	2 cut(s)	585, 782
OliI	CACNNNNGTG	1 cut(s)	1007
PaeI	GCATGC	2 cut(s)	683, 923
PaeR7I	CTCGAG	2 cut(s)	90, 532
PciI	ACATGT	2 cut(s)	360, 414
PciSI	GCTCTTC	1 cut(s)	746
PcsI	WCGNNNNNNNCGW	2 cut(s)	753, 788
PctI	GAATGC	1 cut(s)	984
PdmI	GAANNNNTTC	1 cut(s)	1023
PfeI	GAWTC	3 cut(s)	198, 334, 779
PflMI	CCANNNNNTGG	2 cut(s)	44, 55
PinAI	ACCGGT	1 cut(s)	596
PleI	GAGTC	6 cut(s)	173, 175, 328, 333, 503, 682
PluTI	GGCGCC	1 cut(s)	1070
PmaCI	CACGTG	1 cut(s)	1173
PmlI	CACGTG	1 cut(s)	1173
PpsI	GAGTC	6 cut(s)	173, 175, 328, 333, 503, 682
Ppu21I	YACGTR	1 cut(s)	1173
PpuMI	RGGWCCY	3 cut(s)	606, 734, 1395
PscI	ACATGT	2 cut(s)	360, 414
Psp1406I	AACGTT	1 cut(s)	291
Psp5II	RGGWCCY	3 cut(s)	606, 734, 1395
Psp6I	CCWGG	2 cut(s)	37, 888
PspCI	CACGTG	1 cut(s)	1173
PspFI	CCCAGC	2 cut(s)	983, 1040
PspGI	CCWGG	2 cut(s)	37, 888
PspN4I	GGNNCC	8 cut(s)	151, 405, 608, 735, 736, 944, 1068, 1396
PspPI	GGNCC	5 cut(s)	606, 734, 942, 1176, 1395
PspPPI	RGGWCCY	3 cut(s)	606, 734, 1395
PstI	CTGCAG	1 cut(s)	1288
PsuI	RGATCY	1 cut(s)	711
RsaI	GTAC	1 cut(s)	370
RsaNI	GTAC	1 cut(s)	369
RseI	CAYNNNNRTG	2 cut(s)	359, 1007
SapI	GCTCTTC	1 cut(s)	746
SaqAI	TTAA	3 cut(s)	294, 1316, 1435
Sau3AI	GATC	8 cut(s)	97, 378, 478, 711, 826, 997, 1030, 1426
Sau96I	GGNCC	5 cut(s)	606, 734, 942, 1176, 1395
SchI	GAGTC	6 cut(s)	173, 176, 329, 333, 503, 683
ScrFI	CCNGG	4 cut(s)	39, 346, 890, 1094
SduI	GDGCHC	1 cut(s)	450
SexAI	ACCWGGT	1 cut(s)	888
SfaNI	GCATC	2 cut(s)	145, 1396
SfcI	CTRYAG	2 cut(s)	843, 1284
SfoI	GGCGCC	1 cut(s)	1068
Sfr274I	CTCGAG	2 cut(s)	90, 532
SfuI	TTCGAA	2 cut(s)	585, 782
SinI	GGWCC	4 cut(s)	606, 734, 942, 1395
SlaI	CTCGAG	2 cut(s)	90, 532
SmiMI	CAYNNNNRTG	2 cut(s)	359, 1007
SmlI	CTYRAG	2 cut(s)	90, 532
SmoI	CTYRAG	2 cut(s)	90, 532
SphI	GCATGC	2 cut(s)	683, 923
Sse9I	AATT	7 cut(s)	395, 500, 555, 564, 1129, 1242, 1431
SsiI	CCGC	3 cut(s)	176, 432, 731
SspDI	GGCGCC	1 cut(s)	1066
SspMI	CTAG	6 cut(s)	20, 561, 573, 1214, 1226, 1271
StyD4I	CCNGG	4 cut(s)	37, 344, 888, 1092
TaaI	ACNGT	3 cut(s)	64, 115, 1121
TaiI	ACGT	5 cut(s)	165, 294, 750, 952, 1175
TasI	AATT	7 cut(s)	395, 500, 555, 564, 1129, 1242, 1431
TfiI	GAWTC	3 cut(s)	198, 334, 779
Tru1I	TTAA	3 cut(s)	294, 1316, 1435
Tru9I	TTAA	3 cut(s)	294, 1316, 1435
TscAI	CASTG	2 cut(s)	886, 1124
TseFI	GTSAC	1 cut(s)	1279
Tsp45I	GTSAC	1 cut(s)	1279
TspDTI	ATGAA	6 cut(s)	16, 17, 97, 196, 259, 1411
TspGWI	ACGGA	2 cut(s)	825, 1235
TspRI	CASTG	2 cut(s)	886, 1124
Van91I	CCANNNNNTGG	2 cut(s)	44, 55
VpaK11BI	GGWCC	4 cut(s)	606, 734, 942, 1395
XapI	RAATTY	4 cut(s)	500, 564, 1129, 1431
XceI	RCATGY	4 cut(s)	364, 418, 683, 923
XhoI	CTCGAG	2 cut(s)	90, 532
XmnI	GAANNNNTTC	1 cut(s)	1023
XspI	CTAG	6 cut(s)	20, 561, 573, 1214, 1226, 1271
Zsp2I	ATGCAT	1 cut(s)	1207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.