Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00012652

Orthogroup ID

OG0010494

Physical Location & Seq

Genomic Coordinates Reverse (-)

632 .. 9957

Gene Structure 9326 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom12652g00010.17

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2643 bp

ATGGATAGCACAGGTGAGTCTGATCGAAAAAGGCGTCACTTTAGCTCCATATCTCCCATGGCTGCTACTGCTAAGAAGCAGCCCGTTTTGCCCATTTATGAGGACAAAAAGCTTGACGTTAAACTCCTGCAATATCAAATTCAGAAGCTAACGCAGAACTTAGAAACTCAGAAGGTGGAGCACTCTATTCTTGAGAATAAATTTTTTCAAATGAAGGACAAACAAAAGGCATATGATTCCACATTAACAGTGGTCAATAAGTCTTGGGAAGAGATGGTTAATGACTTGGAATCTTGTTCCATCCGTTTAAGAGGATCGAACAATCTGAAAGATGCTGAAGACATTTCCATCAGGGATGATGAGGATCAAAATGGTGCTCCGTCTGCATTGCAGGATGCTTTTCTTGACCGCCTTTCACAAGCAGATGCGACTGAAAGTTCATGTTCATGTAAAAGTTTTAATCAGATGGAAGAAGATAGAGGGACTACCATTGAAAAGACTAAGAAAATTGTAGGTAATGTCATAGCTGCAATTGACAACCAGTGGCGTGTGAAGGATGCATTGCATGATGCACTTGTGAAAGTGCTTCCAGAAGATGGCACAAGTAGGCAGAAGACATCAACTGACTTTAAAAATGAAGTTAAGAACTTGAGATTGGCCTTTATTGATATGTTTTTCGAGCATAGAACGTTGGCAAGGGAATTGCAAAGCGATTGTGACTTCGAAGCAAAACATAAAGCTGAGCTTAAACGTTTGAAATGTGAATTAGAAACCGCGGCTGGTGAATTAAAAGACATTGATCGTCAACTAGACACTCTTAAGCCACAGAAAAATGCTGCAAAAGGCACGGCTTTCCCACTTCCAAATTTTGGGAACAAGCATGTGGATAGAGTCAGAGATAAGCAAAAAGATCTGCAAGATATGGAGTCTACTCTCAAGGATCTAATGGACCAAGCTTCATCTCGGCTAATGGACATCAAAGGCCTTCATGAAGAAAGGATAAAAATATTACAGAAGTTATCTAGCTTGCAGAACATGCTTAAAAATGTAGAGTGTATTTCTTCTTCCCAAGCTTATCTCTTGGTGAGAGATCAAATAGAAAAGTCAAAGTCAGAAGTCTTCGAGTGCCAGGGCTTATTTGAGAAACTACAGGCTGAGAACGATAATCTTTTGTGGAAGGAGAGGGAACTTATTGTCAAGAGTGACATTGCTGATGTTTTTCGAAGATCTTCTGCAGTTGTTGAATCTAGAATTTCTGATTTGGGGATAGAAATACAGAAACAGATTGAGGAAAGAAAATTGATTGAAGCCAAGCTGGAAGAGGCATCAAGAGAACCAGGAAGAAAAGAAATCATTAAAGAATTTAAATCCTTGGTTTCTTCATTTCCTGACAAAATGGGTACCATGCAAGGTCAATTACGTAAATACAAAGAGGCTGCTTCTGACTTTCATTCTTTAAAGGCTGATGTGCAGTCTCTTTCCAGCATCCTTGATAGGAAGGTGAAAGAGTGTGAGACTTTGTATACCCGATCCAAAGATCAAGACACTGAGATACAAAAGTTGAATGCTGTGGTCCAAGATTTAAAGGAAAGTGACTCAGAGTTAAATCTGATTTTGGAAATGTATAGAAATGAGTTGACTGATTCAAGGGATGTCTTGGAATCTAGAGATTCAGAATGCAGAGCATGGGCTCGTGTTGAAAGTTTGAAGTCCTCTCTTGATGAACGCAACTTGGAATTACGAGTTAAGACAGCAAATGAAGCTGAGGCCATTTCTCAACAAAGGCTAGCTGCTGCTGAGGCTGAGATTGCTGACTTGAGACAGAAATTTGAAGCTTACAAAAGGGATATTTTGAGACTTTCTGATATTTTGAAATCCAAAAATGAAGAAAATGGGGCATACTTATCTGAAATTGAGACTATTGGACAGTCGTATGATGATATGCAAACTCAAAACCAACATCTACTGCAGCAAATTACTGAGAGAGATGACTATAACATTAAGCTTGTTTTAGAGGGGGTAAGGGCAAGACAACAGCAGAATGCTGTACTCATGGACAAACGCAAAATGGAGAGGGAGATTCAACTAGGCAATCATTCTCTTAATTTCTACAACATGAAAGCAGCTCGAATTGAAGATCAGTTGAAGATATGCAAAAATCATATTCAGAAAGTAGCAGAAGATAAGTTGCAAAAACAAATTACATTGGAAAATACTCGAAAGAGATTGTTAGAAGTCCGAAGGCAATCTCAGCAGTTATGGGAGGCATTAGATGCGTCACAATCTAAAGTTGAAAAAAGTCACAATGGTCTGTCAGATCTGCAGTTGGAACTTGAGAAGGAAAGGTTTGAAAAGAGAAGAAAAGAGGAGGAATTGGAAGTTTTAAAAAGGAAGGCTTCACAGCTTCGAGCACAGACGGAGGGTTCATCAATTGTTGAAAAGCTTCAACAGGAACTTGGAGAATACAAGGAGATACTGAAGTGTGATGTCTGCCTTGACAGGACAAAACAGGTTGTCATTACAAAATGCTATCACTTGTTCTGCAACCCTTGTGTGAAAAAAGTACTTGAAACTCGACAGAGGAAGTGCCCGAGGTGTTTCATGAGCTTTGGGCCTAATGATGTAAAACCCGTATACATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006325 GO:0006464 GO:0006513 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009814 GO:0009817 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010162 GO:0010228 GO:0010389 GO:0010390 GO:0010431 GO:0010564 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0016740 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022611 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033523 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051276 GO:0051301 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0051781 GO:0061458 GO:0065007 GO:0070647 GO:0071695 GO:0071704 GO:0071840 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901987 GO:1901990 GO:1902749 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

881

Amino Acids

101.83

Weight (kDa)

6.36

Isoelectric Point (pI)

51.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44950 AT2G44950
fragaria_vesca	FvH4_7g09510 FvH4_7g09510 FvH4_7g09510
malus_domestica	MD02G1218200.v1.1 MD07G1098900.v1.1
prunus_persica	Prupe.2G122900_v2.0.a1
pyrus_communis	pycom07g08140 pycom12652g00010
rosa_chinensis	RchiOBHm_Chr1g0346311
rosa_laevigata	RLG00000028806
rosa_multiflora	Rmu_co8504721.1_g000001 Rmu_sc0003363.1_g000041
rosa_roxburghii	Rroxscaffold_4G00308720
rosa_rugosa	Rorug01G0179100
rosa_samantha	Rh1AG198500 Rh1BG164500 Rh1CG183800 Rh1DG195200
rosa_wichuraiana	Rw1G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	1400
AccB1I	GGYRCC	1 cut(s)	1400
AccB7I	CCANNNNNTGG	2 cut(s)	596, 869
AccI	GTMKAC	3 cut(s)	929, 1523, 2634
AccII	CGCG	1 cut(s)	776
AciI	CCGC	3 cut(s)	409, 774, 776
AclI	AACGTT	2 cut(s)	689, 751
AclWI	GGATC	4 cut(s)	322, 372, 948, 1524
AcsI	RAATTY	6 cut(s)	138, 200, 865, 1251, 1361, 1826
AcuI	CTGAAG	2 cut(s)	357, 2498
AcyI	GRCGYC	1 cut(s)	34
AfaI	GTAC	3 cut(s)	1402, 2049, 2565
AfiI	CCNNNNNNNGG	2 cut(s)	596, 869
AflII	CTTAAG	1 cut(s)	818
AjnI	CCWGG	2 cut(s)	1128, 1336
AjuI	GAANNNNNNNTTGG	2 cut(s)	638, 670
Alw21I	GWGCWC	3 cut(s)	183, 379, 2413
Alw26I	GTCTC	5 cut(s)	1479, 1508, 1813, 1849, 1910
AlwI	GGATC	4 cut(s)	322, 372, 948, 1524
Ama87I	CYCGRG	1 cut(s)	2590
AoxI	GGCC	4 cut(s)	657, 982, 1767, 2612
ApeKI	GCWGC	9 cut(s)	62, 79, 527, 836, 1436, 1790, 1793, 1969, 2123
ApoI	RAATTY	6 cut(s)	138, 200, 865, 1251, 1361, 1826
ArsI	GACNNNNNNTTYG	2 cut(s)	19, 51
Asp700I	GAANNNNTTC	2 cut(s)	1228, 2442
Asp718I	GGTACC	1 cut(s)	1400
AspS9I	GGNCC	3 cut(s)	949, 1573, 2612
AsuHPI	GGTGA	4 cut(s)	26, 794, 1096, 1513
AsuII	TTCGAA	2 cut(s)	723, 1222
AsuNHI	GCTAGC	1 cut(s)	1786
AvaI	CYCGRG	1 cut(s)	2590
AvaII	GGWCC	2 cut(s)	949, 1573
BaeGI	GKGCMC	1 cut(s)	2591
BaeI	ACNNNNGTAYC	4 cut(s)	1544, 1577, 2465, 2498
BanI	GGYRCC	1 cut(s)	1400
BanII	GRGCYC	1 cut(s)	1693
BarI	GAAGNNNNNNTAC	2 cut(s)	1048, 1080
BauI	CACGAG	1 cut(s)	1692
BbsI	GAAGAC	3 cut(s)	345, 620, 1111
Bbv12I	GWGCWC	3 cut(s)	183, 379, 2413
BbvCI	CCTCAGC	2 cut(s)	1764, 1797
BbvI	GCAGC	9 cut(s)	49, 91, 514, 823, 1423, 1777, 1780, 1981, 2135
BccI	CCATC	5 cut(s)	268, 308, 356, 460, 590
BceAI	ACGGC	1 cut(s)	864
BciT130I	CCWGG	2 cut(s)	1130, 1338
BcoDI	GTCTC	5 cut(s)	1479, 1508, 1813, 1849, 1910
BfaI	CTAG	6 cut(s)	809, 1023, 1248, 1665, 1787, 2087
BfmI	CTRYAG	4 cut(s)	1148, 1233, 1967, 2321
BfrI	CTTAAG	1 cut(s)	818
BglII	AGATCT	3 cut(s)	910, 1226, 2317
BlpI	GCTNAGC	1 cut(s)	741
BmcAI	AGTACT	1 cut(s)	2565
Bme1390I	CCNGG	2 cut(s)	1130, 1338
Bme18I	GGWCC	2 cut(s)	949, 1573
BmeT110I	CYCGRG	1 cut(s)	2590
BmgT120I	GGNCC	3 cut(s)	949, 1573, 2612
BmiI	GGNNCC	1 cut(s)	1402
BmrFI	CCNGG	2 cut(s)	1130, 1338
BmsI	GCATC	8 cut(s)	322, 385, 415, 547, 559, 1334, 1494, 2263
BmtI	GCTAGC	1 cut(s)	1790
BpiI	GAAGAC	3 cut(s)	345, 620, 1111
Bpu10I	CCTNAGC	2 cut(s)	1764, 1797
Bpu1102I	GCTNAGC	1 cut(s)	741
Bpu14I	TTCGAA	2 cut(s)	723, 1222
BpuEI	CTTGAG	5 cut(s)	212, 670, 920, 1837, 2354
BsaAI	YACGTR	1 cut(s)	1421
BsaBI	GATNNNNATC	1 cut(s)	363
BsaHI	GRCGYC	1 cut(s)	34
BsaJI	CCNNGG	5 cut(s)	57, 774, 1129, 1371, 2591
BsaXI	ACNNNNNCTCC	2 cut(s)	29, 59
Bsc4I	CCNNNNNNNGG	2 cut(s)	596, 869
Bse1I	ACTGG	1 cut(s)	541
Bse3DI	GCAATG	3 cut(s)	386, 560, 1206
Bse8I	GATNNNNATC	1 cut(s)	363
BseBI	CCWGG	2 cut(s)	1130, 1338
BseDI	CCNNGG	5 cut(s)	57, 774, 1129, 1371, 2591
BseGI	GGATG	6 cut(s)	300, 361, 400, 562, 1485, 1657
BseJI	GATNNNNATC	1 cut(s)	363
BseLI	CCNNNNNNNGG	2 cut(s)	596, 869
BseMI	GCAATG	3 cut(s)	386, 560, 1206
BseNI	ACTGG	1 cut(s)	541
BseRI	GAGGAG	1 cut(s)	2381
BseSI	GKGCMC	1 cut(s)	2591
BseXI	GCAGC	9 cut(s)	49, 91, 514, 823, 1423, 1777, 1780, 1981, 2135
BsgI	GTGCAG	1 cut(s)	1490
Bsh1236I	CGCG	1 cut(s)	776
BshFI	GGCC	4 cut(s)	659, 984, 1769, 2614
BshNI	GGYRCC	1 cut(s)	1400
BsiHKAI	GWGCWC	3 cut(s)	183, 379, 2413
BsiHKCI	CYCGRG	1 cut(s)	2590
BslFI	GGGAC	1 cut(s)	496
BslI	CCNNNNNNNGG	2 cut(s)	596, 869
BsmAI	GTCTC	5 cut(s)	1479, 1508, 1813, 1849, 1910
BsmFI	GGGAC	1 cut(s)	496
BsmI	GAATGC	3 cut(s)	1570, 1682, 2047
BsnI	GGCC	4 cut(s)	659, 984, 1769, 2614
BsoBI	CYCGRG	1 cut(s)	2590
Bsp119I	TTCGAA	2 cut(s)	723, 1222
Bsp1286I	GDGCHC	5 cut(s)	183, 379, 1693, 2413, 2591
Bsp1720I	GCTNAGC	1 cut(s)	741
Bsp19I	CCATGG	1 cut(s)	57
BspACI	CCGC	3 cut(s)	409, 774, 776
BspANI	GGCC	4 cut(s)	659, 984, 1769, 2614
BspFNI	CGCG	1 cut(s)	776
BspHI	TCATGA	2 cut(s)	988, 2601
BspLI	GGNNCC	1 cut(s)	1402
BspMAI	CTGCAG	3 cut(s)	1237, 1971, 2325
BspOI	GCTAGC	1 cut(s)	1790
BspPI	GGATC	4 cut(s)	322, 372, 948, 1524
BspT104I	TTCGAA	2 cut(s)	723, 1222
BspT107I	GGYRCC	1 cut(s)	1400
BspTI	CTTAAG	1 cut(s)	818
BsrDI	GCAATG	3 cut(s)	386, 560, 1206
BsrI	ACTGG	1 cut(s)	541
BssECI	CCNNGG	5 cut(s)	57, 774, 1129, 1371, 2591
BssNAI	GTATAC	2 cut(s)	1524, 2635
BssNI	GRCGYC	1 cut(s)	34
BssSI	CACGAG	1 cut(s)	1692
BssT1I	CCWWGG	2 cut(s)	57, 1371
Bst1107I	GTATAC	2 cut(s)	1524, 2635
Bst2BI	CACGAG	1 cut(s)	1692
Bst2UI	CCWGG	2 cut(s)	1130, 1338
Bst4CI	ACNGT	2 cut(s)	250, 1929
Bst6I	CTCTTC	2 cut(s)	264, 1314
BstACI	GRCGYC	1 cut(s)	34
BstAFI	CTTAAG	1 cut(s)	818
BstAPI	GCANNNNNTGC	2 cut(s)	1036, 2273
BstBAI	YACGTR	1 cut(s)	1421
BstBI	TTCGAA	2 cut(s)	723, 1222
BstC8I	GCNNGC	2 cut(s)	1028, 1788
BstDSI	CCRYGG	2 cut(s)	57, 774
BstF5I	GGATG	6 cut(s)	300, 361, 400, 562, 1485, 1657
BstFNI	CGCG	1 cut(s)	776
BstMAI	GTCTC	5 cut(s)	1479, 1508, 1813, 1849, 1910
BstMWI	GCNNNNNNNGC	9 cut(s)	68, 88, 383, 1036, 1760, 1799, 1808, 2251, 2273
BstNI	CCWGG	2 cut(s)	1130, 1338
BstNSI	RCATGY	2 cut(s)	884, 1039
BstSCI	CCNGG	2 cut(s)	1128, 1336
BstSFI	CTRYAG	4 cut(s)	1148, 1233, 1967, 2321
BstSLI	GKGCMC	1 cut(s)	2591
BstSNI	TACGTA	1 cut(s)	1421
BstUI	CGCG	1 cut(s)	776
BstV1I	GCAGC	9 cut(s)	49, 91, 514, 823, 1423, 1777, 1780, 1981, 2135
BstV2I	GAAGAC	3 cut(s)	345, 620, 1111
BstX2I	RGATCY	4 cut(s)	910, 940, 1226, 2317
BstYI	RGATCY	4 cut(s)	910, 940, 1226, 2317
BstZ17I	GTATAC	2 cut(s)	1524, 2635
BsuRI	GGCC	4 cut(s)	659, 984, 1769, 2614
BtgI	CCRYGG	2 cut(s)	57, 774
BtsCI	GGATG	6 cut(s)	300, 361, 400, 562, 1485, 1657
BtsIMutI	CAGTG	3 cut(s)	255, 548, 1545
Cac8I	GCNNGC	2 cut(s)	1028, 1788
CciI	TCATGA	2 cut(s)	988, 2601
Cfr13I	GGNCC	3 cut(s)	949, 1573, 2612
Cfr42I	CCGCGG	1 cut(s)	777
CseI	GACGC	2 cut(s)	23, 2265
Csp6I	GTAC	3 cut(s)	1401, 2048, 2564
CviQI	GTAC	3 cut(s)	1401, 2048, 2564
DraI	TTTAAA	5 cut(s)	631, 1366, 1458, 1584, 2385
Eam1104I	CTCTTC	2 cut(s)	264, 1314
EarI	CTCTTC	2 cut(s)	264, 1314
Eco105I	TACGTA	1 cut(s)	1421
Eco130I	CCWWGG	2 cut(s)	57, 1371
Eco147I	AGGCCT	1 cut(s)	984
Eco24I	GRGCYC	1 cut(s)	1693
Eco47I	GGWCC	2 cut(s)	949, 1573
Eco57I	CTGAAG	2 cut(s)	357, 2498
Eco88I	CYCGRG	1 cut(s)	2590
EcoRII	CCWGG	2 cut(s)	1128, 1336
EcoT14I	CCWWGG	2 cut(s)	57, 1371
EcoT22I	ATGCAT	1 cut(s)	562
EcoT38I	GRGCYC	1 cut(s)	1693
ErhI	CCWWGG	2 cut(s)	57, 1371
FalI	AAGNNNNNCTT	4 cut(s)	729, 761, 2380, 2412
FaqI	GGGAC	1 cut(s)	496
FauNDI	CATATG	1 cut(s)	232
FblI	GTMKAC	3 cut(s)	929, 1523, 2634
FokI	GGATG	6 cut(s)	287, 368, 407, 569, 1472, 1664
FriOI	GRGCYC	1 cut(s)	1693
FspBI	CTAG	6 cut(s)	809, 1023, 1248, 1665, 1787, 2087
HaeIII	GGCC	4 cut(s)	659, 984, 1769, 2614
HgaI	GACGC	2 cut(s)	23, 2265
Hin1I	GRCGYC	1 cut(s)	34
HincII	GTYRAC	2 cut(s)	806, 1638
HindII	GTYRAC	2 cut(s)	806, 1638
HindIII	AAGCTT	6 cut(s)	110, 954, 1071, 1833, 2003, 2441
HphI	GGTGA	4 cut(s)	26, 794, 1096, 1513
Hpy166II	GTNNAC	5 cut(s)	806, 930, 1524, 1638, 2635
Hpy8I	GTNNAC	5 cut(s)	806, 930, 1524, 1638, 2635
HpyAV	CCTTC	9 cut(s)	166, 208, 547, 995, 1171, 1492, 2235, 2332, 2386
HpyCH4III	ACNGT	2 cut(s)	250, 1929
HpyCH4IV	ACGT	4 cut(s)	117, 689, 751, 1420
HpyF10VI	GCNNNNNNNGC	9 cut(s)	68, 88, 383, 1036, 1760, 1799, 1808, 2251, 2273
HpySE526I	ACGT	4 cut(s)	117, 689, 751, 1420
Hsp92I	GRCGYC	1 cut(s)	34
KpnI	GGTACC	1 cut(s)	1404
KspI	CCGCGG	1 cut(s)	777
LmnI	GCTCC	3 cut(s)	50, 178, 382
Lsp1109I	GCAGC	9 cut(s)	49, 91, 514, 823, 1423, 1777, 1780, 1981, 2135
LweI	GCATC	8 cut(s)	322, 385, 415, 547, 559, 1334, 1494, 2263
MaeI	CTAG	6 cut(s)	809, 1023, 1248, 1665, 1787, 2087
MaeII	ACGT	4 cut(s)	117, 689, 751, 1420
MaeIII	GTNAC	6 cut(s)	35, 716, 1202, 1592, 2277, 2300
MfeI	CAATTG	2 cut(s)	531, 2430
MflI	RGATCY	4 cut(s)	910, 940, 1226, 2317
MhlI	GDGCHC	5 cut(s)	183, 379, 1693, 2413, 2591
MlyI	GAGTC	4 cut(s)	26, 900, 935, 1589
MmeI	TCCRAC	1 cut(s)	2307
Mph1103I	ATGCAT	1 cut(s)	562
MroXI	GAANNNNTTC	2 cut(s)	1228, 2442
MslI	CAYNNNNRTG	1 cut(s)	445
MspA1I	CMGCKG	1 cut(s)	776
MspCI	CTTAAG	1 cut(s)	818
MspR9I	CCNGG	2 cut(s)	1130, 1338
MunI	CAATTG	2 cut(s)	531, 2430
Mva1269I	GAATGC	3 cut(s)	1570, 1682, 2047
MvaI	CCWGG	2 cut(s)	1130, 1338
MvnI	CGCG	1 cut(s)	776
MwoI	GCNNNNNNNGC	9 cut(s)	68, 88, 383, 1036, 1760, 1799, 1808, 2251, 2273
NcoI	CCATGG	1 cut(s)	57
NdeI	CATATG	1 cut(s)	232
NheI	GCTAGC	1 cut(s)	1786
NlaIV	GGNNCC	1 cut(s)	1402
NmeAIII	GCCGAG	1 cut(s)	943
NmuCI	GTSAC	6 cut(s)	35, 716, 1202, 1592, 2277, 2300
NsiI	ATGCAT	1 cut(s)	562
NspI	RCATGY	2 cut(s)	884, 1039
NspV	TTCGAA	2 cut(s)	723, 1222
PagI	TCATGA	2 cut(s)	988, 2601
PceI	AGGCCT	1 cut(s)	984
PcsI	WCGNNNNNNNCGW	1 cut(s)	31
PctI	GAATGC	3 cut(s)	1570, 1682, 2047
PdmI	GAANNNNTTC	2 cut(s)	1228, 2442
PfeI	GAWTC	7 cut(s)	236, 290, 1244, 1643, 1661, 1670, 2080
PflMI	CCANNNNNTGG	2 cut(s)	596, 869
PleI	GAGTC	4 cut(s)	25, 899, 934, 1589
PpsI	GAGTC	4 cut(s)	25, 899, 934, 1589
Ppu21I	YACGTR	1 cut(s)	1421
Psp1406I	AACGTT	2 cut(s)	689, 751
Psp6I	CCWGG	2 cut(s)	1128, 1336
PspGI	CCWGG	2 cut(s)	1128, 1336
PspN4I	GGNNCC	1 cut(s)	1402
PspPI	GGNCC	3 cut(s)	949, 1573, 2612
PstI	CTGCAG	3 cut(s)	1237, 1971, 2325
PsuI	RGATCY	4 cut(s)	910, 940, 1226, 2317
RsaI	GTAC	3 cut(s)	1402, 2049, 2565
RsaNI	GTAC	3 cut(s)	1401, 2048, 2564
RseI	CAYNNNNRTG	1 cut(s)	445
SacII	CCGCGG	1 cut(s)	777
Sau96I	GGNCC	3 cut(s)	949, 1573, 2612
ScaI	AGTACT	1 cut(s)	2565
SchI	GAGTC	4 cut(s)	26, 900, 935, 1589
ScrFI	CCNGG	2 cut(s)	1130, 1338
SduI	GDGCHC	5 cut(s)	183, 379, 1693, 2413, 2591
SfaNI	GCATC	8 cut(s)	322, 385, 415, 547, 559, 1334, 1494, 2263
SfcI	CTRYAG	4 cut(s)	1148, 1233, 1967, 2321
Sfr303I	CCGCGG	1 cut(s)	777
SfuI	TTCGAA	2 cut(s)	723, 1222
SgrBI	CCGCGG	1 cut(s)	777
SinI	GGWCC	2 cut(s)	949, 1573
SmiI	ATTTAAAT	1 cut(s)	1366
SmiMI	CAYNNNNRTG	1 cut(s)	445
SmlI	CTYRAG	6 cut(s)	191, 649, 818, 935, 1816, 2333
SmoI	CTYRAG	6 cut(s)	191, 649, 818, 935, 1816, 2333
SnaBI	TACGTA	1 cut(s)	1421
SseBI	AGGCCT	1 cut(s)	984
SsiI	CCGC	3 cut(s)	409, 774, 776
SspI	AATATT	1 cut(s)	1008
SspMI	CTAG	6 cut(s)	809, 1023, 1248, 1665, 1787, 2087
StuI	AGGCCT	1 cut(s)	984
StyD4I	CCNGG	2 cut(s)	1128, 1336
StyI	CCWWGG	2 cut(s)	57, 1371
SwaI	ATTTAAAT	1 cut(s)	1366
TaaI	ACNGT	2 cut(s)	250, 1929
TaiI	ACGT	4 cut(s)	120, 692, 754, 1423
TatI	WGTACW	2 cut(s)	2047, 2563
TauI	GCSGC	1 cut(s)	779
TfiI	GAWTC	7 cut(s)	236, 290, 1244, 1643, 1661, 1670, 2080
TscAI	CASTG	3 cut(s)	255, 548, 1552
TseFI	GTSAC	6 cut(s)	35, 716, 1202, 1592, 2277, 2300
TseI	GCWGC	9 cut(s)	62, 79, 527, 836, 1436, 1790, 1793, 1969, 2123
Tsp45I	GTSAC	6 cut(s)	35, 716, 1202, 1592, 2277, 2300
TspGWI	ACGGA	3 cut(s)	293, 369, 2432
TspRI	CASTG	3 cut(s)	255, 548, 1552
Van91I	CCANNNNNTGG	2 cut(s)	596, 869
Vha464I	CTTAAG	1 cut(s)	818
VpaK11BI	GGWCC	2 cut(s)	949, 1573
XapI	RAATTY	6 cut(s)	138, 200, 865, 1251, 1361, 1826
XbaI	TCTAGA	2 cut(s)	1247, 1664
XceI	RCATGY	2 cut(s)	884, 1039
XcmI	CCANNNNNNNNNTGG	2 cut(s)	55, 247
XmiI	GTMKAC	3 cut(s)	929, 1523, 2634
XmnI	GAANNNNTTC	2 cut(s)	1228, 2442
XspI	CTAG	6 cut(s)	809, 1023, 1248, 1665, 1787, 2087
ZrmI	AGTACT	1 cut(s)	2565
Zsp2I	ATGCAT	1 cut(s)	562

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.