Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0010494

Physical Location & Seq

Genomic Coordinates Forward (+)

7496148 .. 7505963

Gene Structure 9816 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g08140.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2649 bp

ATGGGGAGCACAGGTGAGTCTGATCGAAAACGGCGTCACTTTAACTCCTTATCGCCCATGGCTGCTACTGCTAAGAAGCAGCCCATTTTGCCCATTTCTGAGGACAAAAAGCTTAACATTACTGTCATGCAAGTTCAAAATCAAAATCTATCGCGGAAGTTAGAGACTCAGAAGATGGAGCACTCTATTCTTGAGAATAAATTTTCTCAAATGAAGGACAAACAAAAGGCATATGATTCCATATTAACAGTGGTCAATAAGTCTTGGGAAGAGATGGTTAATGACTTGGAATCTTGTTCCATCCGTACAAGAGAATCGAACAGTCAGAAAGATGCTAAAGACATTTCCATCATGGAAGGTGAGGATCGAACTTGTGTTCAATGTAATGGCGCTTCATCTGCATTGCAGGATGCTTTTCTTAACCGTCTTGCACAAGCAGATGCAACTGAAAGTTCATGTACATATAAAAGTTCTAATCAGATGGAAGAAGATAAAGGTGCTACCGGTGAAAAGACTAAGAATATTGTATGTAATGTTGTAGCTGCAATTGACAACCAGTGGCGTGTGAAGGATGCATTGTATGATGCACTTGTGAAAGAGCTTCCCGAAGATGGCACAAGTAGGCAGAAGACATCGACTGACTTTAAAAATGAAGTTAAGAACTTGAGATTGGCCTTTATCGATATGTTTTTGAAGCACAGAACATTGGCAAGGGAACTGCAGAGCCACCGTGACTTGGATGCAAAGAATAAAGCTGAGCTTAAACGTTTGAAAGGGGAGTTAAAAACTGTAGTTGGTGAATTAGAAGACAGTGATTGTCAACTAAAACAGACAGTTACTACCGCAAAAGGCACAGTTTCCCCAGTTCTAAATGTTGGGAACAAGCATGTTGATAGGGTAAGAGATAAGCAAAAAGATCTGCAAGATATGGAGTCTACTCTCAAGGATCTAATGGACCAAGCTTCATCTCGACTAATGGACATCAAAGGCCTTCATGAAGAAAGGCTAAAAATATTACAGCAGTTATCTAGTTTGCAGAACGTGCTTAAGAATGTGATGTGTATTTCTTCTTCCCAAGCCTATCTCTTGGTGAGAGATCAAATAGAAAAATCAAAGTCAGAAGTTTTTGAGTGCCAGGCCTTATTTGAGAAACTACAGGCTGAGAAGGATAATCTTGTGTGGAGGGAGAGGGAGCTTAATGTCAAGAGTGACATTGCTGATGTTTTTCGAAGATCTTCTGCAGTTGTTGAATCTAGAATTTCTGATCTAGGTGCAGAAATACAGAAACAGATTGGGGAAAGAAAAATGATTGAAGCCAAGCTCGAAGAGGCATCAAGAGAACCAGGAAGAAAAGAAATCATTAAAGAATTTAAAGCTTTGGTTTCATCATTTCCTGAGAAAATGGGCACCATGCAAGCTCAATTACGTAAATACAAAGAGGCTGCTTCTGATTTTCATTCTTTGAAGGCTGATGTGCAGTCTCTATCCAGCATCCTTGATAGGAAGGTGAAAGAGTGTGAGACTTTATCTGCCAGATCCAAAGATCAAGACGCTGAGATACAAAAGTTGAATGTTGTGGTCCAAGATTTAAAGGAAAGCGAGTCAGAGTTAAATCTGATTTTGGAAATGTATAGACGTGAGTTGACTGATTCAAGGGATGTATTGGAAGCTAGAGATTCAGAATGCAAGGCATGGGCTCATGTTGAAAGTTTGAAGTCCTCTCTTGACGAACGCAACTTGGAATTACGGGTTAAGAGAGCAAACGAAGCTGAGGCTATTTCTCAACAAAGGCTAGCTGCTGCTGAAGCTGAGATTGCTGACTTGAGACAGAAATTTGAAGCTTCCAAAAGGGATATTTTGAGACTTTCTGATGTTCTGAAATCCAAAAATGAAGAAAATGAGGCATACTTATCTGAAATTGAGACAATTGGACAGGCATATGATGATATGCAAACGCAAAACCAACATCTACTGCAGCAAATTACCGAGAGAGATGACTATAACATTAAGCTTGTTCTAGAGGGGGTAAGGGCAAGACAACAGCAGAATGCTGTACTCATGGACAATAGGAAAATGGAGCGGGAGATTCAACAAGGCCATCATTCTCTTAATTTCTATAACATGAAAGCCGCTCGAATCGAAGATCAGTTGAAAATATGCAAGGATCATGTTCAGAAAGTAGCAGAAGATAAGTTGCAAAAACAAATTACGTTGGAAAATACTCAAAAGAGATTGTTAGAAGTCCGAAGGCAATCTCAGCAGTTACGGGAGGCTTTAGCCGCATCACAATCTAAAGTTGGAGAAAGTCGAAAGGGTCTGTCAGAGCTGCAGTTGGAACTAGAGAAGGAACGGTTTGAAAAGAGAAGAAAAGAGGAGGAACTGGAAGTTTTAAAAAGAAAGGCTTCACGGCTTCGAGCAGAGACGGAGGCTTCATCAATTGTTGAAAAGCTTCAACAGGAACTTGGAGAATACAAGGAGATACTGAAGTGTGATGTCTGCCTTGACAGGACAAAACAGGTTGTCATTACAAAATGCTATCACTTGTTCTGCAACCCTTGTGTGAAAAAAGTACTTGAAACTCGACAGAGGAAGTGCCCGAGGTGTGCCGTGAGCTTTGGACCTAATGATGTAAAACCTGTATACATCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0002376 GO:0003006 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0006325 GO:0006464 GO:0006513 GO:0006807 GO:0006950 GO:0006952 GO:0006955 GO:0006996 GO:0007275 GO:0007346 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009620 GO:0009653 GO:0009791 GO:0009814 GO:0009817 GO:0009965 GO:0009987 GO:0010016 GO:0010154 GO:0010162 GO:0010228 GO:0010389 GO:0010390 GO:0010431 GO:0010564 GO:0016043 GO:0016567 GO:0016569 GO:0016570 GO:0016574 GO:0016740 GO:0019538 GO:0019787 GO:0021700 GO:0022414 GO:0022611 GO:0032446 GO:0032501 GO:0032502 GO:0032504 GO:0033523 GO:0036211 GO:0042802 GO:0042803 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0045087 GO:0046983 GO:0048316 GO:0048366 GO:0048367 GO:0048518 GO:0048522 GO:0048608 GO:0048609 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051276 GO:0051301 GO:0051302 GO:0051704 GO:0051707 GO:0051726 GO:0051781 GO:0061458 GO:0065007 GO:0070647 GO:0071695 GO:0071704 GO:0071840 GO:0098542 GO:0099402 GO:0140096 GO:1901564 GO:1901987 GO:1901990 GO:1902749 GO:1905392

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

zf-C3HC4 zf-C3HC4_2 zf-C3HC4_3

Protein Analysis

883

Amino Acids

101.28

Weight (kDa)

7.93

Isoelectric Point (pI)

51.51

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010494)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G44950 AT2G44950
fragaria_vesca	FvH4_7g09510 FvH4_7g09510 FvH4_7g09510
malus_domestica	MD02G1218200.v1.1 MD07G1098900.v1.1
prunus_persica	Prupe.2G122900_v2.0.a1
pyrus_communis	pycom07g08140 pycom12652g00010
rosa_chinensis	RchiOBHm_Chr1g0346311
rosa_laevigata	RLG00000028806
rosa_multiflora	Rmu_co8504721.1_g000001 Rmu_sc0003363.1_g000041
rosa_roxburghii	Rroxscaffold_4G00308720
rosa_rugosa	Rorug01G0179100
rosa_samantha	Rh1AG198500 Rh1BG164500 Rh1CG183800 Rh1DG195200
rosa_wichuraiana	Rw1G016680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1406
AccBSI	CCGCTC	2 cut(s)	2080, 2132
AccI	GTMKAC	2 cut(s)	935, 2640
AccII	CGCG	1 cut(s)	154
AciI	CCGC	5 cut(s)	154, 843, 2080, 2130, 2280
AclI	AACGTT	1 cut(s)	766
AclWI	GGATC	4 cut(s)	372, 954, 1530, 2172
AcsI	RAATTY	4 cut(s)	200, 1257, 1367, 1832
AcuI	CTGAAG	2 cut(s)	1824, 2504
AcyI	GRCGYC	1 cut(s)	34
AfaI	GTAC	4 cut(s)	307, 460, 2055, 2571
AfiI	CCNNNNNNNGG	2 cut(s)	611, 736
AflII	CTTAAG	1 cut(s)	1046
AgeI	ACCGGT	1 cut(s)	503
AjiI	CACGTC	1 cut(s)	1637
AjnI	CCWGG	2 cut(s)	1134, 1342
AjuI	GAANNNNNNNTTGG	2 cut(s)	653, 685
Alw21I	GWGCWC	2 cut(s)	11, 183
Alw26I	GTCTC	7 cut(s)	158, 1485, 1514, 1819, 1855, 1916, 2414
AlwI	GGATC	4 cut(s)	372, 954, 1530, 2172
Ama87I	CYCGRG	1 cut(s)	2596
AoxI	GGCC	4 cut(s)	672, 988, 1137, 2095
ApeKI	GCWGC	8 cut(s)	62, 79, 542, 1442, 1796, 1799, 1975, 2326
ApoI	RAATTY	4 cut(s)	200, 1257, 1367, 1832
ArsI	GACNNNNNNTTYG	2 cut(s)	19, 51
AsiGI	ACCGGT	1 cut(s)	503
Asp700I	GAANNNNTTC	3 cut(s)	1234, 2401, 2448
AspLEI	GCGC	1 cut(s)	392
AspS9I	GGNCC	3 cut(s)	955, 1579, 2618
AsuHPI	GGTGA	6 cut(s)	26, 371, 518, 809, 1102, 1519
AsuII	TTCGAA	1 cut(s)	1228
AsuNHI	GCTAGC	1 cut(s)	1792
AvaI	CYCGRG	1 cut(s)	2596
AvaII	GGWCC	3 cut(s)	955, 1579, 2618
BaeGI	GKGCMC	2 cut(s)	1409, 2597
BaeI	ACNNNNGTAYC	4 cut(s)	1550, 1583, 2471, 2504
BanI	GGYRCC	1 cut(s)	1406
BanII	GRGCYC	1 cut(s)	1699
BarI	GAAGNNNNNNTAC	4 cut(s)	376, 408, 1054, 1086
BbsI	GAAGAC	2 cut(s)	635, 813
Bbv12I	GWGCWC	2 cut(s)	11, 183
BbvCI	CCTCAGC	1 cut(s)	1770
BbvI	GCAGC	8 cut(s)	49, 91, 529, 1429, 1783, 1786, 1987, 2313
BccI	CCATC	7 cut(s)	169, 268, 308, 356, 475, 605, 2106
BceAI	ACGGC	3 cut(s)	47, 2423, 2591
BciT130I	CCWGG	2 cut(s)	1136, 1344
BcoDI	GTCTC	7 cut(s)	158, 1485, 1514, 1819, 1855, 1916, 2414
BfaI	CTAG	7 cut(s)	1029, 1254, 1268, 1671, 1793, 2018, 2339
BfmI	CTRYAG	6 cut(s)	719, 789, 1154, 1239, 1973, 2327
BfoI	RGCGCY	1 cut(s)	393
BfrI	CTTAAG	1 cut(s)	1046
BglII	AGATCT	2 cut(s)	916, 1232
BlpI	GCTNAGC	1 cut(s)	756
BmcAI	AGTACT	1 cut(s)	2571
Bme1390I	CCNGG	2 cut(s)	1136, 1344
Bme18I	GGWCC	3 cut(s)	955, 1579, 2618
BmeT110I	CYCGRG	1 cut(s)	2596
BmgBI	CACGTC	1 cut(s)	1637
BmgT120I	GGNCC	3 cut(s)	955, 1579, 2618
BmiI	GGNNCC	1 cut(s)	1408
BmrFI	CCNGG	2 cut(s)	1136, 1344
BmrI	ACTGGG	1 cut(s)	857
BmsI	GCATC	9 cut(s)	322, 400, 430, 562, 574, 730, 1340, 1500, 2291
BmtI	GCTAGC	1 cut(s)	1796
BmuI	ACTGGG	1 cut(s)	857
BpiI	GAAGAC	2 cut(s)	635, 813
Bpu10I	CCTNAGC	1 cut(s)	1770
Bpu1102I	GCTNAGC	1 cut(s)	756
Bpu14I	TTCGAA	1 cut(s)	1228
BpuEI	CTTGAG	4 cut(s)	212, 685, 926, 1843
Bsa29I	ATCGAT	1 cut(s)	681
BsaAI	YACGTR	1 cut(s)	1427
BsaHI	GRCGYC	1 cut(s)	34
BsaJI	CCNNGG	2 cut(s)	57, 2597
BsaWI	WCCGGW	1 cut(s)	503
BsaXI	ACNNNNNCTCC	3 cut(s)	28, 29, 59
Bsc4I	CCNNNNNNNGG	2 cut(s)	611, 736
Bse118I	RCCGGY	1 cut(s)	503
Bse1I	ACTGG	3 cut(s)	556, 863, 2385
Bse3DI	GCAATG	2 cut(s)	401, 1212
BseBI	CCWGG	2 cut(s)	1136, 1344
BseCI	ATCGAT	1 cut(s)	681
BseDI	CCNNGG	2 cut(s)	57, 2597
BseGI	GGATG	6 cut(s)	300, 415, 577, 745, 1491, 1663
BseLI	CCNNNNNNNGG	2 cut(s)	611, 736
BseMI	GCAATG	2 cut(s)	401, 1212
BseMII	CTCAG	9 cut(s)	90, 182, 747, 1152, 1386, 1545, 1761, 1800, 2270
BseNI	ACTGG	3 cut(s)	556, 863, 2385
BseRI	GAGGAG	1 cut(s)	2387
BseSI	GKGCMC	2 cut(s)	1409, 2597
BseXI	GCAGC	8 cut(s)	49, 91, 529, 1429, 1783, 1786, 1987, 2313
BsgI	GTGCAG	2 cut(s)	1293, 1496
Bsh1236I	CGCG	1 cut(s)	154
BshFI	GGCC	4 cut(s)	674, 990, 1139, 2097
BshNI	GGYRCC	1 cut(s)	1406
BshTI	ACCGGT	1 cut(s)	503
BshVI	ATCGAT	1 cut(s)	681
BsiHKAI	GWGCWC	2 cut(s)	11, 183
BsiHKCI	CYCGRG	1 cut(s)	2596
BsiSI	CCGG	1 cut(s)	504
BslI	CCNNNNNNNGG	2 cut(s)	611, 736
BsmAI	GTCTC	7 cut(s)	158, 1485, 1514, 1819, 1855, 1916, 2414
BsmBI	CGTCTC	1 cut(s)	2414
BsmI	GAATGC	2 cut(s)	1688, 2053
BsnI	GGCC	4 cut(s)	674, 990, 1139, 2097
BsoBI	CYCGRG	1 cut(s)	2596
Bsp119I	TTCGAA	1 cut(s)	1228
Bsp1286I	GDGCHC	5 cut(s)	11, 183, 1409, 1699, 2597
Bsp1407I	TGTACA	1 cut(s)	458
Bsp1720I	GCTNAGC	1 cut(s)	756
Bsp19I	CCATGG	1 cut(s)	57
BspACI	CCGC	5 cut(s)	154, 843, 2080, 2130, 2280
BspANI	GGCC	4 cut(s)	674, 990, 1139, 2097
BspCNI	CTCAG	9 cut(s)	91, 181, 748, 1153, 1387, 1546, 1762, 1801, 2269
BspDI	ATCGAT	1 cut(s)	681
BspFNI	CGCG	1 cut(s)	154
BspHI	TCATGA	1 cut(s)	994
BspLI	GGNNCC	1 cut(s)	1408
BspMAI	CTGCAG	4 cut(s)	723, 1243, 1977, 2331
BspOI	GCTAGC	1 cut(s)	1796
BspPI	GGATC	4 cut(s)	372, 954, 1530, 2172
BspT104I	TTCGAA	1 cut(s)	1228
BspT107I	GGYRCC	1 cut(s)	1406
BspTI	CTTAAG	1 cut(s)	1046
BsrBI	CCGCTC	2 cut(s)	2080, 2132
BsrDI	GCAATG	2 cut(s)	401, 1212
BsrFI	RCCGGY	1 cut(s)	503
BsrGI	TGTACA	1 cut(s)	458
BsrI	ACTGG	3 cut(s)	556, 863, 2385
BssAI	RCCGGY	1 cut(s)	503
BssECI	CCNNGG	2 cut(s)	57, 2597
BssNAI	GTATAC	1 cut(s)	2641
BssNI	GRCGYC	1 cut(s)	34
BssT1I	CCWWGG	1 cut(s)	57
Bst1107I	GTATAC	1 cut(s)	2641
Bst2UI	CCWGG	2 cut(s)	1136, 1344
Bst6I	CTCTTC	2 cut(s)	264, 1320
BstACI	GRCGYC	1 cut(s)	34
BstAFI	CTTAAG	1 cut(s)	1046
BstAPI	GCANNNNNTGC	1 cut(s)	1042
BstAUI	TGTACA	1 cut(s)	458
BstBAI	YACGTR	1 cut(s)	1427
BstBI	TTCGAA	1 cut(s)	1228
BstC8I	GCNNGC	2 cut(s)	1416, 1794
BstDSI	CCRYGG	1 cut(s)	57
BstF5I	GGATG	6 cut(s)	300, 415, 577, 745, 1491, 1663
BstFNI	CGCG	1 cut(s)	154
BstH2I	RGCGCY	1 cut(s)	393
BstHHI	GCGC	1 cut(s)	392
BstMAI	GTCTC	7 cut(s)	158, 1485, 1514, 1819, 1855, 1916, 2414
BstMWI	GCNNNNNNNGC	9 cut(s)	68, 88, 398, 1042, 1766, 1805, 1814, 2257, 2279
BstNI	CCWGG	2 cut(s)	1136, 1344
BstNSI	RCATGY	1 cut(s)	890
BstSCI	CCNGG	2 cut(s)	1134, 1342
BstSFI	CTRYAG	6 cut(s)	719, 789, 1154, 1239, 1973, 2327
BstSLI	GKGCMC	2 cut(s)	1409, 2597
BstSNI	TACGTA	1 cut(s)	1427
BstUI	CGCG	1 cut(s)	154
BstV1I	GCAGC	8 cut(s)	49, 91, 529, 1429, 1783, 1786, 1987, 2313
BstV2I	GAAGAC	2 cut(s)	635, 813
BstX2I	RGATCY	4 cut(s)	916, 946, 1232, 1535
BstYI	RGATCY	4 cut(s)	916, 946, 1232, 1535
BstZ17I	GTATAC	1 cut(s)	2641
Bsu15I	ATCGAT	1 cut(s)	681
BsuRI	GGCC	4 cut(s)	674, 990, 1139, 2097
BsuTUI	ATCGAT	1 cut(s)	681
BtgI	CCRYGG	1 cut(s)	57
BtrI	CACGTC	1 cut(s)	1637
BtsCI	GGATG	6 cut(s)	300, 415, 577, 745, 1491, 1663
BtsIMutI	CAGTG	3 cut(s)	255, 563, 817
Cac8I	GCNNGC	2 cut(s)	1416, 1794
CciI	TCATGA	1 cut(s)	994
CfoI	GCGC	1 cut(s)	392
Cfr10I	RCCGGY	1 cut(s)	503
Cfr13I	GGNCC	3 cut(s)	955, 1579, 2618
ClaI	ATCGAT	1 cut(s)	681
CseI	GACGC	2 cut(s)	23, 1559
Csp6I	GTAC	4 cut(s)	306, 459, 2054, 2570
CspAI	ACCGGT	1 cut(s)	503
CviQI	GTAC	4 cut(s)	306, 459, 2054, 2570
DraI	TTTAAA	4 cut(s)	646, 1372, 1590, 2391
Eam1104I	CTCTTC	2 cut(s)	264, 1320
EarI	CTCTTC	2 cut(s)	264, 1320
Eco105I	TACGTA	1 cut(s)	1427
Eco130I	CCWWGG	1 cut(s)	57
Eco147I	AGGCCT	2 cut(s)	990, 1139
Eco24I	GRGCYC	1 cut(s)	1699
Eco47I	GGWCC	3 cut(s)	955, 1579, 2618
Eco57I	CTGAAG	2 cut(s)	1824, 2504
Eco88I	CYCGRG	1 cut(s)	2596
EcoRII	CCWGG	2 cut(s)	1134, 1342
EcoT14I	CCWWGG	1 cut(s)	57
EcoT22I	ATGCAT	1 cut(s)	577
EcoT38I	GRGCYC	1 cut(s)	1699
ErhI	CCWWGG	1 cut(s)	57
Esp3I	CGTCTC	1 cut(s)	2414
FalI	AAGNNNNNCTT	4 cut(s)	744, 776, 2386, 2418
FauI	CCCGC	1 cut(s)	2073
FauNDI	CATATG	2 cut(s)	232, 1939
FblI	GTMKAC	2 cut(s)	935, 2640
FokI	GGATG	6 cut(s)	287, 422, 584, 752, 1478, 1670
FriOI	GRGCYC	1 cut(s)	1699
FspBI	CTAG	7 cut(s)	1029, 1254, 1268, 1671, 1793, 2018, 2339
GlaI	GCGC	1 cut(s)	391
HaeII	RGCGCY	1 cut(s)	393
HaeIII	GGCC	4 cut(s)	674, 990, 1139, 2097
HapII	CCGG	1 cut(s)	504
HgaI	GACGC	2 cut(s)	23, 1559
HhaI	GCGC	1 cut(s)	392
Hin1I	GRCGYC	1 cut(s)	34
Hin6I	GCGC	1 cut(s)	390
HinP1I	GCGC	1 cut(s)	390
HincII	GTYRAC	2 cut(s)	821, 1644
HindII	GTYRAC	2 cut(s)	821, 1644
HindIII	AAGCTT	6 cut(s)	110, 960, 1374, 1839, 2009, 2447
HpaII	CCGG	1 cut(s)	504
HphI	GGTGA	6 cut(s)	26, 371, 518, 809, 1102, 1519
Hpy166II	GTNNAC	4 cut(s)	821, 936, 1644, 2641
Hpy8I	GTNNAC	4 cut(s)	821, 936, 1644, 2641
HpyAV	CCTTC	9 cut(s)	208, 350, 562, 1001, 1159, 1459, 1498, 2241, 2338
HpyCH4IV	ACGT	5 cut(s)	766, 1041, 1426, 1636, 2210
HpyF10VI	GCNNNNNNNGC	9 cut(s)	68, 88, 398, 1042, 1766, 1805, 1814, 2257, 2279
HpySE526I	ACGT	5 cut(s)	766, 1041, 1426, 1636, 2210
Hsp92I	GRCGYC	1 cut(s)	34
HspAI	GCGC	1 cut(s)	390
LmnI	GCTCC	4 cut(s)	6, 178, 1192, 2077
Lsp1109I	GCAGC	8 cut(s)	49, 91, 529, 1429, 1783, 1786, 1987, 2313
LweI	GCATC	9 cut(s)	322, 400, 430, 562, 574, 730, 1340, 1500, 2291
MaeI	CTAG	7 cut(s)	1029, 1254, 1268, 1671, 1793, 2018, 2339
MaeII	ACGT	5 cut(s)	766, 1041, 1426, 1636, 2210
MaeIII	GTNAC	5 cut(s)	35, 731, 835, 1208, 2262
MbiI	CCGCTC	2 cut(s)	2080, 2132
MfeI	CAATTG	3 cut(s)	546, 1926, 2436
MflI	RGATCY	4 cut(s)	916, 946, 1232, 1535
MhlI	GDGCHC	5 cut(s)	11, 183, 1409, 1699, 2597
MlyI	GAGTC	4 cut(s)	26, 160, 941, 1610
MmeI	TCCRAC	3 cut(s)	2193, 2278, 2313
Mph1103I	ATGCAT	1 cut(s)	577
MroXI	GAANNNNTTC	3 cut(s)	1234, 2401, 2448
MspCI	CTTAAG	1 cut(s)	1046
MspI	CCGG	1 cut(s)	504
MspR9I	CCNGG	2 cut(s)	1136, 1344
MunI	CAATTG	3 cut(s)	546, 1926, 2436
Mva1269I	GAATGC	2 cut(s)	1688, 2053
MvaI	CCWGG	2 cut(s)	1136, 1344
MvnI	CGCG	1 cut(s)	154
MwoI	GCNNNNNNNGC	9 cut(s)	68, 88, 398, 1042, 1766, 1805, 1814, 2257, 2279
NcoI	CCATGG	1 cut(s)	57
NdeI	CATATG	2 cut(s)	232, 1939
NheI	GCTAGC	1 cut(s)	1792
NlaIV	GGNNCC	1 cut(s)	1408
NmuCI	GTSAC	3 cut(s)	35, 731, 1208
NsiI	ATGCAT	1 cut(s)	577
NspI	RCATGY	1 cut(s)	890
NspV	TTCGAA	1 cut(s)	1228
PagI	TCATGA	1 cut(s)	994
PceI	AGGCCT	2 cut(s)	990, 1139
PcsI	WCGNNNNNNNCGW	1 cut(s)	31
PctI	GAATGC	2 cut(s)	1688, 2053
PdmI	GAANNNNTTC	3 cut(s)	1234, 2401, 2448
PfeI	GAWTC	8 cut(s)	236, 290, 314, 1250, 1649, 1676, 2086, 2136
PinAI	ACCGGT	1 cut(s)	503
PleI	GAGTC	4 cut(s)	25, 160, 940, 1609
PpsI	GAGTC	4 cut(s)	25, 160, 940, 1609
Ppu21I	YACGTR	1 cut(s)	1427
Psp1406I	AACGTT	1 cut(s)	766
Psp6I	CCWGG	2 cut(s)	1134, 1342
PspGI	CCWGG	2 cut(s)	1134, 1342
PspN4I	GGNNCC	1 cut(s)	1408
PspPI	GGNCC	3 cut(s)	955, 1579, 2618
PstI	CTGCAG	4 cut(s)	723, 1243, 1977, 2331
PsuI	RGATCY	4 cut(s)	916, 946, 1232, 1535
RsaI	GTAC	4 cut(s)	307, 460, 2055, 2571
RsaNI	GTAC	4 cut(s)	306, 459, 2054, 2570
Sau96I	GGNCC	3 cut(s)	955, 1579, 2618
ScaI	AGTACT	1 cut(s)	2571
SchI	GAGTC	4 cut(s)	26, 160, 941, 1610
ScrFI	CCNGG	2 cut(s)	1136, 1344
SduI	GDGCHC	5 cut(s)	11, 183, 1409, 1699, 2597
SfaNI	GCATC	9 cut(s)	322, 400, 430, 562, 574, 730, 1340, 1500, 2291
SfcI	CTRYAG	6 cut(s)	719, 789, 1154, 1239, 1973, 2327
SfuI	TTCGAA	1 cut(s)	1228
SinI	GGWCC	3 cut(s)	955, 1579, 2618
SmlI	CTYRAG	5 cut(s)	191, 664, 941, 1046, 1822
SmoI	CTYRAG	5 cut(s)	191, 664, 941, 1046, 1822
SnaBI	TACGTA	1 cut(s)	1427
SseBI	AGGCCT	2 cut(s)	990, 1139
SsiI	CCGC	5 cut(s)	154, 843, 2080, 2130, 2280
SspI	AATATT	2 cut(s)	523, 1014
SspMI	CTAG	7 cut(s)	1029, 1254, 1268, 1671, 1793, 2018, 2339
StuI	AGGCCT	2 cut(s)	990, 1139
StyD4I	CCNGG	2 cut(s)	1134, 1342
StyI	CCWWGG	1 cut(s)	57
TaiI	ACGT	5 cut(s)	769, 1044, 1429, 1639, 2213
TatI	WGTACW	3 cut(s)	458, 2053, 2569
TauI	GCSGC	2 cut(s)	2132, 2282
TfiI	GAWTC	8 cut(s)	236, 290, 314, 1250, 1649, 1676, 2086, 2136
TscAI	CASTG	3 cut(s)	255, 563, 817
TseFI	GTSAC	3 cut(s)	35, 731, 1208
TseI	GCWGC	8 cut(s)	62, 79, 542, 1442, 1796, 1799, 1975, 2326
Tsp45I	GTSAC	3 cut(s)	35, 731, 1208
TspGWI	ACGGA	2 cut(s)	293, 2438
TspRI	CASTG	3 cut(s)	255, 563, 817
Vha464I	CTTAAG	1 cut(s)	1046
VpaK11BI	GGWCC	3 cut(s)	955, 1579, 2618
XapI	RAATTY	4 cut(s)	200, 1257, 1367, 1832
XbaI	TCTAGA	2 cut(s)	1253, 2017
XceI	RCATGY	1 cut(s)	890
XcmI	CCANNNNNNNNNTGG	1 cut(s)	247
XmiI	GTMKAC	2 cut(s)	935, 2640
XmnI	GAANNNNTTC	3 cut(s)	1234, 2401, 2448
XspI	CTAG	7 cut(s)	1029, 1254, 1268, 1671, 1793, 2018, 2339
ZrmI	AGTACT	1 cut(s)	2571
Zsp2I	ATGCAT	1 cut(s)	577

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.