FvH4_7g14840
ERF Family

belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
13012162 .. 13014548
2387 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g14840.t1

Sequence Viewer

Length: 1329 bp
ATGAGACGAACTCCGTCGTACGGACGCCGCCGCAACACCAGCTCCGATGCTGGGACCACCCCTGACCGCCTCCCCTACGCATCACCTGCCCCCTCATCTTACTCTAACGCCTCATCCACTGCAAGCAAGTCCAGTGCAGTCGCCGTCGCCGCTCGCTCCGTCGTCGGAGTCTTCGTCGGCTGCTTCACTCCTCCCGACACCAGAAGCTCGGCCAGCTTTGCCGACTCCTCCGAGGAGTTTAAACCTCCTTCCGTGTTTTCGGATAACTCTGGAGCTGGGAGTGAGAGGAGACGCGCCTCTGGTTCGAGCCGGGGAGTTTACTCTAGTACGAATAACTCGAGACATGAGAGACAGGCTGGGAATGTGAAGTTCACGATGGATGAAATCTATAGGGCCACTAAGAACTTCTCTCCCTCGGTCAAGATCGGACAAGGCGGCTTTGGGACGGTGTACAAGGGGACGCTTGAAGATGGGACATCAGTTGCCATTAAGCGTGCCAAAAAGAGTGTGTATGACAAGCATTTGGGTGTGGAGTTCCAGAGCGAGATTCAAATGCTGTCGCAGGTGGAGCATTTGAACCTGGTCAAGTTTTATGGGTATGTGGAGTATGAAGATGAGAAAGTTGTGGTTGTGGAGTATGTTCCTAATGGAACCCTTAGACAACATTTGGATTGTATGCAAGGCGACATTCTTGACCTTACGGCGCGGCTTGACATTGCAATCGATGTGGCTCATGCTGTCACCTATCTTCATATGTACACAGATCATCCGATAATCCATAGGGACATAAAGTCTTCCAACATTCTCCTAACAGAGAACTTAAGAGCAAAAGTAGCTGACTTTGGTTTTGCTAGGCTTGCTGCTGATAGTGATTCAGGTGCTACTCATGTGTCTACTCAAGTTAAAGGAACCGCTGGCTACTTGGACCCCGAGTACCTCAGAACCTATCAACTTACAGATAAGAGTGATGTTTACTCATTTGGTGTGTTACTAGTTGAACTGGTTACAGGCAGGCGTCCGATTGAACCAAAACGGGAACTCAAGGAACGGATAACTGCAAAATGGGCTATGAAGAAGTTTAGTGATGGAGACGCTATTCTAATTTTGGATCCCAGGCTGGAAAAGAATGCAGCCAACAATTTAGCCATTGAAAAGATTCTTGAACTATCCTTGCAATGCTTGGCTCAACGTAGACAGCACCGGCCTAGCATGAAGAGGTGCGCGGAGATCCTCTGGAGCATCCGCAAGGACTATAAAGAGATGTTAGCTCCAGATTTTCGCTCATCTTCCACCCGTTCGCAGAGGAGCACTTCAACAAGAGAAGGGTGA

Protein Analysis

443

Amino Acids

49.07

Weight (kDa)

9.23

Isoelectric Point (pI)

49.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 139 - 412 1.8e-50 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 141 - 410 2e-49 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 94, 553
Acc36I ACCTGC 2 cut(s) 94, 553
AccBSI CCGCTC 1 cut(s) 152
AccI GTMKAC 2 cut(s) 893, 1192
AccII CGCG 3 cut(s) 294, 706, 1223
AciI CCGC 9 cut(s) 28, 31, 67, 150, 435, 706, 912, 1223, 1243
AclWI GGATC 3 cut(s) 1103, 1116, 1222
AcoI YGGCCR 1 cut(s) 210
AcyI GRCGYC 2 cut(s) 25, 1015
AfaI GTAC 5 cut(s) 20, 328, 452, 758, 935
AfiI CCNNNNNNNGG 2 cut(s) 20, 51
AflII CTTAAG 1 cut(s) 820
AgsI TTSAA 8 cut(s) 467, 551, 577, 998, 1025, 1151, 1163, 1314
AhdI GACNNNNNGTC 1 cut(s) 790
AhlI ACTAGT 1 cut(s) 991
AjnI CCWGG 2 cut(s) 579, 1112
AluBI AGCT 6 cut(s) 42, 207, 216, 275, 836, 1268
AluI AGCT 6 cut(s) 42, 207, 216, 275, 836, 1268
Alw21I GWGCWC 1 cut(s) 1310
Alw26I GTCTC 4 cut(s) 283, 334, 343, 1083
AlwI GGATC 3 cut(s) 1103, 1116, 1222
Ama87I CYCGRG 2 cut(s) 337, 929
AoxI GGCC 3 cut(s) 210, 393, 1202
ApeKI GCWGC 3 cut(s) 180, 860, 1130
ArsI GACNNNNNNTTYG 2 cut(s) 830, 862
Asp700I GAANNNNTTC 1 cut(s) 1155
AspLEI GCGC 3 cut(s) 296, 706, 1223
AspS9I GGNCC 3 cut(s) 54, 393, 925
AsuC2I CCSGG 1 cut(s) 311
AsuHPI GGTGA 2 cut(s) 75, 733
AvaI CYCGRG 2 cut(s) 337, 929
AvaII GGWCC 2 cut(s) 54, 925
BamHI GGATCC 1 cut(s) 1108
BbsI GAAGAC 2 cut(s) 163, 786
Bbv12I GWGCWC 1 cut(s) 1310
BbvI GCAGC 3 cut(s) 167, 847, 1142
BccI CCATC 3 cut(s) 370, 464, 1079
BceAI ACGGC 2 cut(s) 128, 717
BciT130I CCWGG 2 cut(s) 581, 1114
BcnI CCSGG 1 cut(s) 311
BcoDI GTCTC 4 cut(s) 283, 334, 343, 1083
BcuI ACTAGT 1 cut(s) 991
BfaI CTAG 4 cut(s) 324, 852, 992, 1206
BfmI CTRYAG 1 cut(s) 388
BfrI CTTAAG 1 cut(s) 820
BfuAI ACCTGC 2 cut(s) 94, 553
BisI GCNGC 8 cut(s) 28, 31, 150, 181, 436, 707, 861, 1131
BlsI GCNGC 8 cut(s) 29, 32, 151, 182, 437, 708, 862, 1132
Bme1390I CCNGG 3 cut(s) 311, 581, 1114
Bme18I GGWCC 2 cut(s) 54, 925
BmeRI GACNNNNNGTC 1 cut(s) 790
BmeT110I CYCGRG 2 cut(s) 337, 929
BmgT120I GGNCC 3 cut(s) 54, 393, 925
BmiI GGNNCC 5 cut(s) 55, 652, 910, 927, 1110
BmrFI CCNGG 3 cut(s) 311, 581, 1114
BmsI GCATC 3 cut(s) 37, 89, 1248
BpiI GAAGAC 2 cut(s) 163, 786
BplI GAGNNNNNCTC 1 cut(s) 27
BpmI CTGGAG 3 cut(s) 291, 1254, 1255
BpuEI CTTGAG 2 cut(s) 882, 1025
BpuMI CCSGG 1 cut(s) 311
Bsa29I ATCGAT 1 cut(s) 723
BsaHI GRCGYC 2 cut(s) 25, 1015
BsaJI CCNNGG 4 cut(s) 231, 310, 414, 1112
BsaXI ACNNNNNCTCC 4 cut(s) 26, 56, 159, 189
Bsc4I CCNNNNNNNGG 2 cut(s) 20, 51
Bse118I RCCGGY 1 cut(s) 1200
Bse1I ACTGG 2 cut(s) 132, 1005
Bse3DI GCAATG 2 cut(s) 714, 1181
BseBI CCWGG 2 cut(s) 581, 1114
BseCI ATCGAT 1 cut(s) 723
BseDI CCNNGG 4 cut(s) 231, 310, 414, 1112
BseGI GGATG 4 cut(s) 113, 385, 766, 1239
BseLI CCNNNNNNNGG 2 cut(s) 20, 51
BseMI GCAATG 2 cut(s) 714, 1181
BseMII CTCAG 1 cut(s) 952
BseNI ACTGG 2 cut(s) 132, 1005
BseRI GAGGAG 5 cut(s) 180, 217, 248, 301, 1318
BseXI GCAGC 3 cut(s) 167, 847, 1142
BseYI CCCAGC 3 cut(s) 50, 275, 356
BsgI GTGCAG 1 cut(s) 156
Bsh1236I CGCG 3 cut(s) 294, 706, 1223
BshFI GGCC 3 cut(s) 212, 395, 1204
BshVI ATCGAT 1 cut(s) 723
BsiHKAI GWGCWC 1 cut(s) 1310
BsiHKCI CYCGRG 2 cut(s) 337, 929
BsiSI CCGG 2 cut(s) 310, 1201
BsiWI CGTACG 1 cut(s) 18
BslFI GGGAC 5 cut(s) 67, 457, 472, 487, 797
BslI CCNNNNNNNGG 2 cut(s) 20, 51
BsmAI GTCTC 4 cut(s) 283, 334, 343, 1083
BsmBI CGTCTC 2 cut(s) 283, 1083
BsmFI GGGAC 5 cut(s) 67, 457, 472, 487, 797
BsmI GAATGC 1 cut(s) 1132
BsnI GGCC 3 cut(s) 212, 395, 1204
BsoBI CYCGRG 2 cut(s) 337, 929
Bsp1286I GDGCHC 1 cut(s) 1310
Bsp1407I TGTACA 2 cut(s) 450, 756
Bsp143I GATC 4 cut(s) 423, 763, 1108, 1227
BspACI CCGC 9 cut(s) 28, 31, 67, 150, 435, 706, 912, 1223, 1243
BspANI GGCC 3 cut(s) 212, 395, 1204
BspCNI CTCAG 1 cut(s) 951
BspDI ATCGAT 1 cut(s) 723
BspFNI CGCG 3 cut(s) 294, 706, 1223
BspLI GGNNCC 5 cut(s) 55, 652, 910, 927, 1110
BspMI ACCTGC 2 cut(s) 94, 553
BspPI GGATC 3 cut(s) 1103, 1116, 1222
BspTI CTTAAG 1 cut(s) 820
BsrBI CCGCTC 1 cut(s) 152
BsrDI GCAATG 2 cut(s) 714, 1181
BsrFI RCCGGY 1 cut(s) 1200
BsrGI TGTACA 2 cut(s) 450, 756
BsrI ACTGG 2 cut(s) 132, 1005
BssAI RCCGGY 1 cut(s) 1200
BssECI CCNNGG 4 cut(s) 231, 310, 414, 1112
BssMI GATC 4 cut(s) 423, 763, 1108, 1227
BssNI GRCGYC 2 cut(s) 25, 1015
Bst2UI CCWGG 2 cut(s) 581, 1114
Bst4CI ACNGT 1 cut(s) 448
Bst6I CTCTTC 1 cut(s) 1208
BstACI GRCGYC 2 cut(s) 25, 1015
BstAFI CTTAAG 1 cut(s) 820
BstAPI GCANNNNNTGC 1 cut(s) 86
BstAUI TGTACA 2 cut(s) 450, 756
BstC8I GCNNGC 7 cut(s) 124, 154, 214, 495, 858, 916, 1013
BstDEI CTNAG 3 cut(s) 399, 656, 938
BstF5I GGATG 4 cut(s) 113, 385, 766, 1239
BstFNI CGCG 3 cut(s) 294, 706, 1223
BstHHI GCGC 3 cut(s) 296, 706, 1223
BstKTI GATC 4 cut(s) 426, 766, 1111, 1230
BstMAI GTCTC 4 cut(s) 283, 334, 343, 1083
BstMBI GATC 4 cut(s) 423, 763, 1108, 1227
BstMWI GCNNNNNNNGC 9 cut(s) 39, 86, 149, 213, 218, 568, 833, 857, 1064
BstNI CCWGG 2 cut(s) 581, 1114
BstSCI CCNGG 3 cut(s) 309, 579, 1112
BstSFI CTRYAG 1 cut(s) 388
BstUI CGCG 3 cut(s) 294, 706, 1223
BstV1I GCAGC 3 cut(s) 167, 847, 1142
BstV2I GAAGAC 2 cut(s) 163, 786
BstX2I RGATCY 2 cut(s) 1108, 1227
BstYI RGATCY 2 cut(s) 1108, 1227
Bsu15I ATCGAT 1 cut(s) 723
BsuRI GGCC 3 cut(s) 212, 395, 1204
BsuTUI ATCGAT 1 cut(s) 723
BtsCI GGATG 4 cut(s) 113, 385, 766, 1239
BtsI GCAGTG 1 cut(s) 117
BtsIMutI CAGTG 2 cut(s) 117, 139
BveI ACCTGC 2 cut(s) 94, 553
Cac8I GCNNGC 7 cut(s) 124, 154, 214, 495, 858, 916, 1013
CfoI GCGC 3 cut(s) 296, 706, 1223
Cfr10I RCCGGY 1 cut(s) 1200
Cfr13I GGNCC 3 cut(s) 54, 393, 925
ClaI ATCGAT 1 cut(s) 723
CseI GACGC 5 cut(s) 33, 300, 469, 1004, 1100
CsiI ACCWGGT 1 cut(s) 579
Csp6I GTAC 5 cut(s) 19, 327, 451, 757, 934
CspCI CAANNNNNGTGG 2 cut(s) 708, 743
CviAII CATG 4 cut(s) 344, 734, 887, 1210
CviQI GTAC 5 cut(s) 19, 327, 451, 757, 934
DdeI CTNAG 3 cut(s) 399, 656, 938
DpnI GATC 4 cut(s) 425, 765, 1110, 1229
DpnII GATC 4 cut(s) 423, 763, 1108, 1227
DraI TTTAAA 1 cut(s) 241
DriI GACNNNNNGTC 1 cut(s) 790
EaeI YGGCCR 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 1208
Eam1105I GACNNNNNGTC 1 cut(s) 790
EarI CTCTTC 1 cut(s) 1208
Eco47I GGWCC 2 cut(s) 54, 925
Eco88I CYCGRG 2 cut(s) 337, 929
EcoRII CCWGG 2 cut(s) 579, 1112
Esp3I CGTCTC 2 cut(s) 283, 1083
FaeI CATG 4 cut(s) 347, 737, 890, 1213
FaqI GGGAC 5 cut(s) 67, 457, 472, 487, 797
FatI CATG 4 cut(s) 343, 733, 886, 1209
FauNDI CATATG 1 cut(s) 753
FblI GTMKAC 2 cut(s) 893, 1192
Fnu4HI GCNGC 8 cut(s) 28, 31, 150, 181, 436, 707, 861, 1131
FokI GGATG 4 cut(s) 100, 392, 753, 1226
Fsp4HI GCNGC 8 cut(s) 28, 31, 150, 181, 436, 707, 861, 1131
FspBI CTAG 4 cut(s) 324, 852, 992, 1206
GlaI GCGC 3 cut(s) 295, 705, 1222
GluI GCNGC 8 cut(s) 28, 31, 150, 181, 436, 707, 861, 1131
GsaI CCCAGC 3 cut(s) 54, 279, 360
GsuI CTGGAG 3 cut(s) 291, 1254, 1255
HaeIII GGCC 3 cut(s) 212, 395, 1204
HapII CCGG 2 cut(s) 310, 1201
HgaI GACGC 5 cut(s) 33, 300, 469, 1004, 1100
HhaI GCGC 3 cut(s) 296, 706, 1223
Hin1I GRCGYC 2 cut(s) 25, 1015
Hin1II CATG 4 cut(s) 347, 737, 890, 1213
Hin6I GCGC 3 cut(s) 294, 704, 1221
HinP1I GCGC 3 cut(s) 294, 704, 1221
HinfI GANTC 5 cut(s) 168, 224, 547, 872, 1156
HpaII CCGG 2 cut(s) 310, 1201
HphI GGTGA 2 cut(s) 75, 733
Hpy166II GTNNAC 7 cut(s) 319, 372, 451, 759, 894, 973, 1193
Hpy188I TCNGA 8 cut(s) 46, 167, 232, 262, 428, 771, 941, 1020
Hpy8I GTNNAC 7 cut(s) 319, 372, 451, 759, 894, 973, 1193
Hpy99I CGWCG 5 cut(s) 19, 149, 164, 167, 179
HpyAV CCTTC 2 cut(s) 258, 1316
HpyCH4III ACNGT 1 cut(s) 448
HpyCH4IV ACGT 1 cut(s) 1189
HpyCH4V TGCA 7 cut(s) 122, 137, 679, 719, 1058, 1130, 1174
HpyF10VI GCNNNNNNNGC 9 cut(s) 39, 86, 149, 213, 218, 568, 833, 857, 1064
HpyF3I CTNAG 3 cut(s) 399, 656, 938
HpySE526I ACGT 1 cut(s) 1189
Hsp92I GRCGYC 2 cut(s) 25, 1015
Hsp92II CATG 4 cut(s) 347, 737, 890, 1213
HspAI GCGC 3 cut(s) 294, 704, 1221
Kzo9I GATC 4 cut(s) 423, 763, 1108, 1227
LmnI GCTCC 7 cut(s) 47, 161, 272, 568, 1236, 1273, 1305
Lsp1109I GCAGC 3 cut(s) 167, 847, 1142
LweI GCATC 3 cut(s) 37, 89, 1248
MabI ACCWGGT 1 cut(s) 579
MaeI CTAG 4 cut(s) 324, 852, 992, 1206
MaeII ACGT 1 cut(s) 1189
MaeIII GTNAC 3 cut(s) 739, 987, 1003
MalI GATC 4 cut(s) 425, 765, 1110, 1229
MbiI CCGCTC 1 cut(s) 152
MboI GATC 4 cut(s) 423, 763, 1108, 1227
MboII GAAGA 8 cut(s) 163, 479, 623, 740, 786, 1084, 1225, 1278
MflI RGATCY 2 cut(s) 1108, 1227
MhlI GDGCHC 1 cut(s) 1310
MluCI AATT 2 cut(s) 1101, 1138
MlyI GAGTC 2 cut(s) 177, 218
MmeI TCCRAC 2 cut(s) 145, 822
MroXI GAANNNNTTC 1 cut(s) 1155
MseI TTAA 4 cut(s) 240, 489, 821, 903
MslI CAYNNNNRTG 1 cut(s) 525
MspA1I CMGCKG 1 cut(s) 914
MspCI CTTAAG 1 cut(s) 820
MspI CCGG 2 cut(s) 310, 1201
MspR9I CCNGG 3 cut(s) 311, 581, 1114
MssI GTTTAAAC 1 cut(s) 241
Mva1269I GAATGC 1 cut(s) 1132
MvaI CCWGG 2 cut(s) 581, 1114
MvnI CGCG 3 cut(s) 294, 706, 1223
MwoI GCNNNNNNNGC 9 cut(s) 39, 86, 149, 213, 218, 568, 833, 857, 1064
NciI CCSGG 1 cut(s) 311
NdeI CATATG 1 cut(s) 753
NdeII GATC 4 cut(s) 423, 763, 1108, 1227
NlaIII CATG 4 cut(s) 347, 737, 890, 1213
NlaIV GGNNCC 5 cut(s) 55, 652, 910, 927, 1110
NmeAIII GCCGAG 1 cut(s) 188
NmuCI GTSAC 1 cut(s) 739
PaeR7I CTCGAG 1 cut(s) 337
PaqCI CACCTGC 2 cut(s) 94, 553
PcsI WCGNNNNNNNCGW 2 cut(s) 171, 335
PctI GAATGC 1 cut(s) 1132
PdmI GAANNNNTTC 1 cut(s) 1155
PfeI GAWTC 3 cut(s) 547, 872, 1156
Pfl23II CGTACG 1 cut(s) 18
PkrI GCNGC 8 cut(s) 29, 32, 151, 182, 437, 708, 862, 1132
PleI GAGTC 2 cut(s) 176, 218
PmeI GTTTAAAC 1 cut(s) 241
PpsI GAGTC 2 cut(s) 176, 218
Psp6I CCWGG 2 cut(s) 579, 1112
PspFI CCCAGC 3 cut(s) 50, 275, 356
PspGI CCWGG 2 cut(s) 579, 1112
PspLI CGTACG 1 cut(s) 18
PspN4I GGNNCC 5 cut(s) 55, 652, 910, 927, 1110
PspPI GGNCC 3 cut(s) 54, 393, 925
PsuI RGATCY 2 cut(s) 1108, 1227
RsaI GTAC 5 cut(s) 20, 328, 452, 758, 935
RsaNI GTAC 5 cut(s) 19, 327, 451, 757, 934
RseI CAYNNNNRTG 1 cut(s) 525
SaqAI TTAA 4 cut(s) 240, 489, 821, 903
SatI GCNGC 8 cut(s) 28, 31, 150, 181, 436, 707, 861, 1131
Sau3AI GATC 4 cut(s) 423, 763, 1108, 1227
Sau96I GGNCC 3 cut(s) 54, 393, 925
SchI GAGTC 2 cut(s) 177, 218
ScrFI CCNGG 3 cut(s) 311, 581, 1114
SduI GDGCHC 1 cut(s) 1310
SexAI ACCWGGT 1 cut(s) 579
SfaNI GCATC 3 cut(s) 37, 89, 1248
SfcI CTRYAG 1 cut(s) 388
Sfr274I CTCGAG 1 cut(s) 337
SinI GGWCC 2 cut(s) 54, 925
SlaI CTCGAG 1 cut(s) 337
SmiMI CAYNNNNRTG 1 cut(s) 525
SmlI CTYRAG 4 cut(s) 337, 820, 897, 1040
SmoI CTYRAG 4 cut(s) 337, 820, 897, 1040
SpeI ACTAGT 1 cut(s) 991
Sse9I AATT 2 cut(s) 1101, 1138
SsiI CCGC 9 cut(s) 28, 31, 67, 150, 435, 706, 912, 1223, 1243
SspMI CTAG 4 cut(s) 324, 852, 992, 1206
StyD4I CCNGG 3 cut(s) 309, 579, 1112
TaaI ACNGT 1 cut(s) 448
TaiI ACGT 1 cut(s) 1192
TaqI TCGA 3 cut(s) 305, 338, 723
TaqII GACCGA 1 cut(s) 406
TasI AATT 2 cut(s) 1101, 1138
TatI WGTACW 2 cut(s) 450, 756
TauI GCSGC 5 cut(s) 30, 33, 152, 438, 709
TfiI GAWTC 3 cut(s) 547, 872, 1156
Tru1I TTAA 4 cut(s) 240, 489, 821, 903
Tru9I TTAA 4 cut(s) 240, 489, 821, 903
TscAI CASTG 2 cut(s) 124, 139
TseFI GTSAC 1 cut(s) 739
TseI GCWGC 3 cut(s) 180, 860, 1130
Tsp45I GTSAC 1 cut(s) 739
TspDTI ATGAA 5 cut(s) 396, 624, 740, 1085, 1226
TspGWI ACGGA 4 cut(s) 36, 148, 241, 1063
TspRI CASTG 2 cut(s) 124, 139
Vha464I CTTAAG 1 cut(s) 820
VpaK11BI GGWCC 2 cut(s) 54, 925
XhoI CTCGAG 1 cut(s) 337
XmiI GTMKAC 2 cut(s) 893, 1192
XmnI GAANNNNTTC 1 cut(s) 1155
XspI CTAG 4 cut(s) 324, 852, 992, 1206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.