Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0011910

Physical Location & Seq

Genomic Coordinates Reverse (-)

16432819 .. 16435486

Gene Structure 2668 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g20132.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2502 bp

ATGACCAACCCAAAACCTCCAGACCAACCCCAACTCCTCGAAACCATCACCAACCTCCTAACCACCACCAAACCCCCAAACCTCCAATCCCTCAAACCCTACATTCCCCACCTGACCGAGCCCCTCCTCCTCTCTCTCCTCCGCTCCAAAACCCTAGCCTCCAACCCCACCACACTCCTCTCCTTCTTCCACTGGGCCCACTCCCACCTCCCCCTCCTCTCCCAAACCCCTCGCCCCCTCCTCACCCTCCTCCCCTCTCTCTTCTCCCACAACAAATTCTCCGACGCCAAAACCCTCCTCGTCAATTTCATCTCCTCCGATAACCACAACCGCCTCCACCGCCTCCTCCTCCGCCCCGACGCCGCCGTCCCCAGCCGCTCCAAGGCCCTCCTCGACACCTCCATCGGCGCCTACCTCCACGTCGGCAAGGCGCACCTCGCCGCGCAGCTCTTCACCAAGATGAAGAAGCTGCGGTACCGGCCGAATGTGCTCACCTGTAATAGTTTGATTATGGCTCTCGTGAGATGTAACACCTCTCATTCTATCGCATTGTGTAGGGAGATAGTTAGGGATGCGATTCGGTTAGGTGTTGGTGTTAATACTAGGACTTTTAATGTGTTGATATATGCGGATTGCTTGGAGAATAAGTTTAGGGATGCGGTTGAGTTGCTGAGTAAGATGAGTGAGTTTGGATGTGTTGCGGATAGTGTGAGCTATAATACGGTTTTGGATTGGTTGTGTAAGAAGGGGCAGTTGAGTGAGGCGAGGGATTTGTTAATGGAAATGAGGATGAGAGGGGTGTTGCCGAGTAGGAACACGTATAATATTTTGGTTTTTGGGTATTGTAAGTTGGGAATGTTGGAGGAGGCTAGGCAGGTGGTGGAGTTGATGAGGCAGAATGAGTTGTTGCCGGATGTTTGGACGTATAATATGTTGGTTAGTGGGTTTTGTGGAGCCGGGAGGATTAAGGAGGCGATGAGGGTGAGGGATGAGATGGAGAAGTTGAAGCTGGTGCCGGATGTTGTCACGTATAATACGTTGATTGATGGGTGTTTTGAGTGGGATGATGAATACAAGGCGTTGGAGTTGCTTGAGGAGATGGGTGAACGGGGAGTGAGGGCAAATGAAGTTACTCATAATATAATGGTGAAGTGGTATTGTAAGGAAGGGAAGATGGACGAAGCAAGTGAAACTATCAGGAAAATGAAGGAAGATGGGTTTGCTCCTTCTTGTGTCACTTACAATACTTTGATTAGTGGGTATTGCAAAGCAGGGAAAATGAAAGAAGCGTTTACTATGATGGATGAGATGGGTAGGAAAGGTTTGAATATGGACACTTACACCCTCAATACCATTCTTCACACATTTTGCAGTCAGAAGAAGCTAGACAAGGCATTTACATTGTTTCATACTTCGGTTGAGAGGGGTTATATACTTGATGAGGTGACCTATGGAACTCTGATCATGGGATGCTTTAAGAACGAAAATCCAGACAAGGCTTTGGAGCTTTGGAAAGAGATGAAGGAGAAACAGGTCCTTCCTAGCATTGTCACTTACAATTCTATAATTAGAGGACTATGCCAGTGTGGGAAAACCGATCAAGCATTTGACAAGTTGAACGAGCTTGTAACAACGGGTCTAGTCCCTGATGAAACTACATACAACACGATAATTCATGGCTATTGCCATGAGGGTCAGGTTGAGAAAGCAATCCAGTTGCACAACAAAATGGTTGAGATATCATTGACACCGGATGTCTTTACATGTAATATTCTTCTTTCTGGACTGTGCAGTCAGGGTATGTTAGAAAAAGCTCTTAAGCTTTTTAACACCTGGATTTCTAAAGGAAAGGACGTCGATGCAGTTACATACAACATATTGATCTCCGGCCTTTGCAAAGAAAGGAGGTTTGATGATGTTTTTGGTCTTTATGCTGACATGAAAGAAAAGAAATTAGCTCCTGACCGGTATACATATAGTGCCATTCTTGATGCATTTACTGATACTGGTAATGTTAAGGAAGCAGAAGAGTTTATATCAAAAATGGTTGAAATGGGGAACTTACAGGATTGGTCCTTTAAATTAGACAAGGGACCAGATGGGGTGACCTGTGAATCTTCAGTAGAATCTGATTCAACCTCACTAGCTTATTCAGACCAGATCAGTCAGTTGTGTATGCAAGGTAAATACAAGGATGCAATCAACATTTTGCGAGAGTCGAAGCAGAAAGGTATCACTTTAACTAAAGATGTTTATATACATGTAATGGAAGGTTTGATTAAAAGGCGAAAACGCACATCAAAGGTTGCTGGAACAAGGGAATATAGTCTCGCCTCTTGGGGTGACGACCACGAGTCCAGTACAGCAAAAACATGTGTTGAAGGATGCTCATCATTCCTAAAAGCTGCTATCAAGTGGTCTGCAGAACTTGGTGCACCTAGGGCTGGGGCATACATGTTATGCCAGCTAACTATATGTACTTTGGATCTCCTGAGGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0006139 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0016070 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

834

Amino Acids

94.17

Weight (kDa)

7.85

Isoelectric Point (pI)

29.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	135 - 174	8.5e-06	PPR repeat family
PPR_long	PF17177	168 - 302	2.7e-06	Pentacotripeptide-repeat region of PRORP
PPR_1	PF12854	231 - 263	1.1e-07	PPR repeat
PPR_2	PF13041	235 - 283	4.3e-16	PPR repeat family
PPR	PF01535	237 - 267	3.1e-07	PPR repeat
PPR_3	PF13812	258 - 315	1.1e-07	Pentatricopeptide repeat domain
PPR_1	PF12854	265 - 298	7.2e-09	PPR repeat
PPR	PF01535	273 - 300	2.3e-06	PPR repeat
PPR_2	PF13041	273 - 317	7.4e-12	PPR repeat family
PPR_3	PF13812	293 - 351	1.7e-08	Pentatricopeptide repeat domain
PPR_1	PF12854	301 - 333	3.2e-12	PPR repeat
PPR_2	PF13041	304 - 352	5.8e-16	PPR repeat family
PPR_3	PF13812	328 - 387	3.4e-08	Pentatricopeptide repeat domain
PPR	PF01535	342 - 372	4.9e-06	PPR repeat
PPR_long	PF17177	358 - 453	4.9e-08	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	359 - 388	5.5e-06	PPR repeat family
TPR_24	PF23276	360 - 470	8.5e-10	Fungal tetratrico peptide repeats
PPR_3	PF13812	363 - 421	1.7e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	370 - 403	6e-08	PPR repeat
PPR_2	PF13041	375 - 422	1.5e-14	PPR repeat family
PPR	PF01535	377 - 407	3.1e-07	PPR repeat
PPR_1	PF12854	406 - 437	1.6e-14	PPR repeat
PPR_2	PF13041	409 - 457	1.3e-16	PPR repeat family
PPR	PF01535	412 - 442	8.6e-11	PPR repeat
TPR_24	PF23276	413 - 507	6.7e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	440 - 470	5.9e-06	PPR repeat
PPR_2	PF13041	445 - 493	4.4e-09	PPR repeat family
PPR_long	PF17177	457 - 625	9.8e-13	Pentacotripeptide-repeat region of PRORP
PPR_3	PF13812	468 - 524	3.1e-10	Pentatricopeptide repeat domain
PPR_1	PF12854	476 - 508	7.2e-07	PPR repeat
PPR_2	PF13041	480 - 528	5.7e-16	PPR repeat family
PPR	PF01535	482 - 511	2.4e-08	PPR repeat
PPR_1	PF12854	511 - 541	4.3e-09	PPR repeat
PPR_2	PF13041	514 - 563	9.7e-16	PPR repeat family
TPR_24	PF23276	530 - 646	6.5e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	546 - 578	5.1e-12	PPR repeat
PPR_2	PF13041	549 - 597	1.3e-17	PPR repeat family
PPR	PF01535	553 - 579	3.3e-08	PPR repeat
PPR_1	PF12854	582 - 610	9.1e-08	PPR repeat
PPR_2	PF13041	584 - 633	8.2e-16	PPR repeat family
PPR_3	PF13812	615 - 667	2e-06	Pentatricopeptide repeat domain
PPR_1	PF12854	617 - 647	4.4e-07	PPR repeat
PPR_2	PF13041	620 - 666	3e-16	PPR repeat family
PPR	PF01535	622 - 651	2.6e-07	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011910)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G16880
fragaria_vesca	FvH4_7g20132
malus_domestica	MD01G1131000.v1.1 MD07G1179000.v1.1
prunus_persica	Prupe.2G218100_v2.0.a1 Prupe.2G218100_v2.0.a1
pyrus_communis	pycom01g13980 pycom07g17270
rosa_chinensis	RchiOBHm_Chr1g0364091
rosa_laevigata	RLG00000027517
rosa_multiflora	Rmu_sc0000071.1_g000021 Rmu_sc0011704.1_g000001
rosa_roxburghii	Rroxscaffold_4G00292650
rosa_rugosa	Rorug01G0313500
rosa_samantha	Rh1AG320900 Rh1BG284100 Rh1CG300500 Rh1DG315500
rosa_wichuraiana	Rw1G028450

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	865
AasI	GACNNNNNNGTC	2 cut(s)	365, 1791
AatII	GACGTC	1 cut(s)	1857
Acc36I	ACCTGC	1 cut(s)	865
Acc65I	GGTACC	1 cut(s)	474
AccB1I	GGYRCC	3 cut(s)	407, 474, 1012
AccBSI	CCGCTC	2 cut(s)	144, 378
AccI	GTMKAC	1 cut(s)	1970
AccII	CGCG	1 cut(s)	443
AclWI	GGATC	1 cut(s)	2493
AcoI	YGGCCR	1 cut(s)	479
AcsI	RAATTY	1 cut(s)	275
AcuI	CTGAAG	1 cut(s)	2103
AcyI	GRCGYC	4 cut(s)	285, 360, 408, 1854
AfaI	GTAC	3 cut(s)	476, 2362, 2479
AfiI	CCNNNNNNNGG	2 cut(s)	382, 2444
AflII	CTTAAG	1 cut(s)	1817
AflIII	ACRYGT	5 cut(s)	816, 1763, 2260, 2372, 2454
AgeI	ACCGGT	1 cut(s)	1965
AgsI	TTSAA	6 cut(s)	1006, 1327, 1618, 2051, 2136, 2381
AhdI	GACNNNNNGTC	1 cut(s)	2353
AjiI	CACGTC	1 cut(s)	421
AjnI	CCWGG	1 cut(s)	1832
Alw21I	GWGCWC	2 cut(s)	492, 2437
Alw26I	GTCTC	1 cut(s)	2333
Alw44I	GTGCAC	1 cut(s)	2433
AlwI	GGATC	1 cut(s)	2493
AoxI	GGCC	4 cut(s)	195, 384, 479, 1888
ApaI	GGGCCC	1 cut(s)	199
ApaLI	GTGCAC	1 cut(s)	2433
ApeKI	GCWGC	3 cut(s)	445, 469, 2405
ApoI	RAATTY	1 cut(s)	275
AsiGI	ACCGGT	1 cut(s)	1965
Asp718I	GGTACC	1 cut(s)	474
AspA2I	CCTAGG	1 cut(s)	2438
AspLEI	GCGC	3 cut(s)	410, 433, 445
AspS9I	GGNCC	6 cut(s)	195, 196, 385, 1534, 2073, 2093
AsuC2I	CCSGG	1 cut(s)	958
AvaII	GGWCC	3 cut(s)	1534, 2073, 2093
AvrII	CCTAGG	1 cut(s)	2438
AxyI	CCTNAGG	1 cut(s)	2492
BaeGI	GKGCMC	2 cut(s)	199, 2437
BanI	GGYRCC	3 cut(s)	407, 474, 1012
BanII	GRGCYC	2 cut(s)	123, 199
BarI	GAAGNNNNNNTAC	2 cut(s)	458, 490
BauI	CACGAG	2 cut(s)	518, 2351
Bbv12I	GWGCWC	2 cut(s)	492, 2437
BbvI	GCAGC	3 cut(s)	456, 457, 2392
BceAI	ACGGC	1 cut(s)	350
BciT130I	CCWGG	1 cut(s)	1834
BclI	TGATCA	1 cut(s)	1461
BcnI	CCSGG	1 cut(s)	958
BcoDI	GTCTC	1 cut(s)	2333
BfaI	CTAG	8 cut(s)	155, 603, 870, 1385, 1542, 1640, 2144, 2439
BfmI	CTRYAG	1 cut(s)	2421
BfoI	RGCGCY	1 cut(s)	411
BfrI	CTTAAG	1 cut(s)	1817
BfuAI	ACCTGC	1 cut(s)	865
BisI	GCNGC	6 cut(s)	363, 376, 441, 446, 470, 2406
BlnI	CCTAGG	1 cut(s)	2438
BlsI	GCNGC	6 cut(s)	364, 377, 442, 447, 471, 2407
Bme1390I	CCNGG	2 cut(s)	958, 1834
Bme18I	GGWCC	3 cut(s)	1534, 2073, 2093
BmeRI	GACNNNNNGTC	1 cut(s)	2353
BmgBI	CACGTC	1 cut(s)	421
BmgT120I	GGNCC	6 cut(s)	195, 196, 385, 1534, 2073, 2093
BmiI	GGNNCC	6 cut(s)	197, 409, 476, 955, 1014, 2094
BmrFI	CCNGG	2 cut(s)	958, 1834
BmrI	ACTGGG	1 cut(s)	202
BmsI	GCATC	7 cut(s)	562, 646, 1460, 1849, 1981, 2185, 2375
BmuI	ACTGGG	1 cut(s)	202
BpuEI	CTTGAG	1 cut(s)	1112
BpuMI	CCSGG	1 cut(s)	958
BsaAI	YACGTR	2 cut(s)	819, 1029
BsaBI	GATNNNNATC	1 cut(s)	2389
BsaHI	GRCGYC	4 cut(s)	285, 360, 408, 1854
BsaJI	CCNNGG	2 cut(s)	381, 2438
BsaWI	WCCGGW	2 cut(s)	1750, 1965
BsaXI	ACNNNNNCTCC	6 cut(s)	18, 48, 263, 293, 632, 662
Bsc4I	CCNNNNNNNGG	2 cut(s)	382, 2444
Bse118I	RCCGGY	2 cut(s)	477, 1965
Bse1I	ACTGG	5 cut(s)	197, 1582, 1714, 2011, 2358
Bse21I	CCTNAGG	1 cut(s)	2492
Bse8I	GATNNNNATC	1 cut(s)	2389
BseBI	CCWGG	1 cut(s)	1834
BseDI	CCNNGG	2 cut(s)	381, 2438
BseJI	GATNNNNATC	1 cut(s)	2389
BseLI	CCNNNNNNNGG	2 cut(s)	382, 2444
BseMII	CTCAG	2 cut(s)	662, 2483
BseNI	ACTGG	5 cut(s)	197, 1582, 1714, 2011, 2358
BseSI	GKGCMC	2 cut(s)	199, 2437
BseX3I	CGGCCG	1 cut(s)	479
BseXI	GCAGC	3 cut(s)	456, 457, 2392
BseYI	CCCAGC	2 cut(s)	371, 2444
BsgI	GTGCAG	1 cut(s)	1810
Bsh1236I	CGCG	1 cut(s)	443
Bsh1285I	CGRYCG	1 cut(s)	482
BshFI	GGCC	4 cut(s)	197, 386, 481, 1890
BshNI	GGYRCC	3 cut(s)	407, 474, 1012
BshTI	ACCGGT	1 cut(s)	1965
BsiEI	CGRYCG	1 cut(s)	482
BsiHKAI	GWGCWC	2 cut(s)	492, 2437
BsiSI	CCGG	7 cut(s)	478, 911, 957, 1016, 1751, 1887, 1966
BslFI	GGGAC	3 cut(s)	353, 1628, 2106
BslI	CCNNNNNNNGG	2 cut(s)	382, 2444
BsmAI	GTCTC	1 cut(s)	2333
BsmFI	GGGAC	3 cut(s)	353, 1628, 2106
BsnI	GGCC	4 cut(s)	197, 386, 481, 1890
Bsp120I	GGGCCC	1 cut(s)	195
Bsp1286I	GDGCHC	4 cut(s)	123, 199, 492, 2437
Bsp143I	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
BspANI	GGCC	4 cut(s)	197, 386, 481, 1890
BspCNI	CTCAG	2 cut(s)	663, 2484
BspFNI	CGCG	1 cut(s)	443
BspLI	GGNNCC	6 cut(s)	197, 409, 476, 955, 1014, 2094
BspMAI	CTGCAG	1 cut(s)	2425
BspMI	ACCTGC	1 cut(s)	865
BspPI	GGATC	1 cut(s)	2493
BspQI	GCTCTTC	1 cut(s)	455
BspT107I	GGYRCC	3 cut(s)	407, 474, 1012
BspTI	CTTAAG	1 cut(s)	1817
BsrBI	CCGCTC	2 cut(s)	144, 378
BsrFI	RCCGGY	2 cut(s)	477, 1965
BsrI	ACTGG	5 cut(s)	197, 1582, 1714, 2011, 2358
BssAI	RCCGGY	2 cut(s)	477, 1965
BssECI	CCNNGG	2 cut(s)	381, 2438
BssMI	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
BssNAI	GTATAC	1 cut(s)	1971
BssNI	GRCGYC	4 cut(s)	285, 360, 408, 1854
BssSI	CACGAG	2 cut(s)	518, 2351
BssT1I	CCWWGG	2 cut(s)	381, 2438
Bst1107I	GTATAC	1 cut(s)	1971
Bst2BI	CACGAG	2 cut(s)	518, 2351
Bst2UI	CCWGG	1 cut(s)	1834
Bst4CI	ACNGT	2 cut(s)	724, 1788
Bst6I	CTCTTC	3 cut(s)	266, 455, 2022
BstACI	GRCGYC	4 cut(s)	285, 360, 408, 1854
BstAFI	CTTAAG	1 cut(s)	1817
BstBAI	YACGTR	2 cut(s)	819, 1029
BstC8I	GCNNGC	1 cut(s)	2465
BstDEI	CTNAG	2 cut(s)	671, 2492
BstEII	GGTNACC	2 cut(s)	1444, 2104
BstFNI	CGCG	1 cut(s)	443
BstH2I	RGCGCY	1 cut(s)	411
BstHHI	GCGC	3 cut(s)	410, 433, 445
BstKTI	GATC	5 cut(s)	1464, 1600, 1884, 2163, 2488
BstMAI	GTCTC	1 cut(s)	2333
BstMBI	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
BstMCI	CGRYCG	1 cut(s)	482
BstMWI	GCNNNNNNNGC	5 cut(s)	339, 437, 478, 487, 2441
BstNI	CCWGG	1 cut(s)	1834
BstNSI	RCATGY	4 cut(s)	1767, 2264, 2376, 2458
BstPI	GGTNACC	2 cut(s)	1444, 2104
BstSCI	CCNGG	2 cut(s)	956, 1832
BstSFI	CTRYAG	1 cut(s)	2421
BstSLI	GKGCMC	2 cut(s)	199, 2437
BstUI	CGCG	1 cut(s)	443
BstV1I	GCAGC	3 cut(s)	456, 457, 2392
BstX2I	RGATCY	1 cut(s)	2485
BstYI	RGATCY	1 cut(s)	2485
BstZ17I	GTATAC	1 cut(s)	1971
BstZI	CGGCCG	1 cut(s)	479
Bsu36I	CCTNAGG	1 cut(s)	2492
BsuRI	GGCC	4 cut(s)	197, 386, 481, 1890
BtgZI	GCGATG	1 cut(s)	989
BtrI	CACGTC	1 cut(s)	421
BtsIMutI	CAGTG	2 cut(s)	190, 1589
BveI	ACCTGC	1 cut(s)	865
Cac8I	GCNNGC	1 cut(s)	2465
CfoI	GCGC	3 cut(s)	410, 433, 445
Cfr10I	RCCGGY	2 cut(s)	477, 1965
Cfr13I	GGNCC	6 cut(s)	195, 196, 385, 1534, 2073, 2093
CseI	GACGC	2 cut(s)	293, 368
Csp6I	GTAC	3 cut(s)	475, 2361, 2478
CspAI	ACCGGT	1 cut(s)	1965
CviAII	CATG	8 cut(s)	1465, 1676, 1688, 1764, 1939, 2261, 2373, 2455
CviQI	GTAC	3 cut(s)	475, 2361, 2478
DdeI	CTNAG	2 cut(s)	671, 2492
DinI	GGCGCC	1 cut(s)	409
DpnI	GATC	5 cut(s)	1463, 1599, 1883, 2162, 2487
DpnII	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
DraI	TTTAAA	1 cut(s)	2080
DrdI	GACNNNNNNGTC	2 cut(s)	365, 1791
DriI	GACNNNNNGTC	1 cut(s)	2353
DseDI	GACNNNNNNGTC	2 cut(s)	365, 1791
EaeI	YGGCCR	1 cut(s)	479
EagI	CGGCCG	1 cut(s)	479
Eam1104I	CTCTTC	3 cut(s)	266, 455, 2022
Eam1105I	GACNNNNNGTC	1 cut(s)	2353
EarI	CTCTTC	3 cut(s)	266, 455, 2022
EciI	GGCGGA	1 cut(s)	341
EclXI	CGGCCG	1 cut(s)	479
Eco130I	CCWWGG	2 cut(s)	381, 2438
Eco24I	GRGCYC	2 cut(s)	123, 199
Eco32I	GATATC	1 cut(s)	1740
Eco47I	GGWCC	3 cut(s)	1534, 2073, 2093
Eco52I	CGGCCG	1 cut(s)	479
Eco57I	CTGAAG	1 cut(s)	2103
Eco81I	CCTNAGG	1 cut(s)	2492
Eco91I	GGTNACC	2 cut(s)	1444, 2104
EcoO109I	RGGNCCY	2 cut(s)	385, 1534
EcoO65I	GGTNACC	2 cut(s)	1444, 2104
EcoRII	CCWGG	1 cut(s)	1832
EcoRV	GATATC	1 cut(s)	1740
EcoT14I	CCWWGG	2 cut(s)	381, 2438
EcoT22I	ATGCAT	1 cut(s)	1996
EcoT38I	GRGCYC	2 cut(s)	123, 199
EgeI	GGCGCC	1 cut(s)	409
EheI	GGCGCC	1 cut(s)	409
ErhI	CCWWGG	2 cut(s)	381, 2438
FaeI	CATG	8 cut(s)	1468, 1679, 1691, 1767, 1942, 2264, 2376, 2458
FaqI	GGGAC	3 cut(s)	353, 1628, 2106
FatI	CATG	8 cut(s)	1464, 1675, 1687, 1763, 1938, 2260, 2372, 2454
FbaI	TGATCA	1 cut(s)	1461
FblI	GTMKAC	1 cut(s)	1970
Fnu4HI	GCNGC	6 cut(s)	363, 376, 441, 446, 470, 2406
FriOI	GRGCYC	2 cut(s)	123, 199
Fsp4HI	GCNGC	6 cut(s)	363, 376, 441, 446, 470, 2406
FspBI	CTAG	8 cut(s)	155, 603, 870, 1385, 1542, 1640, 2144, 2439
GlaI	GCGC	3 cut(s)	409, 432, 444
GluI	GCNGC	6 cut(s)	363, 376, 441, 446, 470, 2406
GsaI	CCCAGC	2 cut(s)	375, 2448
HaeII	RGCGCY	1 cut(s)	411
HaeIII	GGCC	4 cut(s)	197, 386, 481, 1890
HapII	CCGG	7 cut(s)	478, 911, 957, 1016, 1751, 1887, 1966
HgaI	GACGC	2 cut(s)	293, 368
HhaI	GCGC	3 cut(s)	410, 433, 445
Hin1I	GRCGYC	4 cut(s)	285, 360, 408, 1854
Hin1II	CATG	8 cut(s)	1468, 1679, 1691, 1767, 1942, 2264, 2376, 2458
Hin6I	GCGC	3 cut(s)	408, 431, 443
HinP1I	GCGC	3 cut(s)	408, 431, 443
HindIII	AAGCTT	1 cut(s)	1820
HinfI	GANTC	6 cut(s)	577, 2114, 2126, 2132, 2216, 2354
HpaII	CCGG	7 cut(s)	478, 911, 957, 1016, 1751, 1887, 1966
Hpy166II	GTNNAC	4 cut(s)	1106, 1293, 1971, 2435
Hpy188I	TCNGA	6 cut(s)	283, 319, 1377, 1461, 2131, 2155
Hpy188III	TCNNGA	8 cut(s)	20, 520, 1198, 1490, 1782, 1961, 1988, 2491
Hpy8I	GTNNAC	4 cut(s)	1106, 1293, 1971, 2435
Hpy99I	CGWCG	4 cut(s)	287, 362, 425, 1859
HpyAV	CCTTC	9 cut(s)	193, 739, 1160, 1201, 1236, 1516, 1547, 2264, 2375
HpyCH4III	ACNGT	2 cut(s)	724, 1788
HpyCH4IV	ACGT	6 cut(s)	420, 818, 923, 1028, 1037, 1854
HpyF10VI	GCNNNNNNNGC	5 cut(s)	339, 437, 478, 487, 2441
HpyF3I	CTNAG	2 cut(s)	671, 2492
HpySE526I	ACGT	6 cut(s)	420, 818, 923, 1028, 1037, 1854
Hsp92I	GRCGYC	4 cut(s)	285, 360, 408, 1854
Hsp92II	CATG	8 cut(s)	1468, 1679, 1691, 1767, 1942, 2264, 2376, 2458
HspAI	GCGC	3 cut(s)	408, 431, 443
KasI	GGCGCC	1 cut(s)	407
KpnI	GGTACC	1 cut(s)	478
Ksp22I	TGATCA	1 cut(s)	1461
Kzo9I	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
LguI	GCTCTTC	1 cut(s)	455
LmnI	GCTCC	6 cut(s)	149, 383, 953, 1228, 1504, 1963
Lsp1109I	GCAGC	3 cut(s)	456, 457, 2392
LweI	GCATC	7 cut(s)	562, 646, 1460, 1849, 1981, 2185, 2375
MaeI	CTAG	8 cut(s)	155, 603, 870, 1385, 1542, 1640, 2144, 2439
MaeII	ACGT	6 cut(s)	420, 818, 923, 1028, 1037, 1854
MalI	GATC	5 cut(s)	1463, 1599, 1883, 2162, 2487
MbiI	CCGCTC	2 cut(s)	144, 378
MboI	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
MflI	RGATCY	1 cut(s)	2485
MhlI	GDGCHC	4 cut(s)	123, 199, 492, 2437
MluCI	AATT	7 cut(s)	275, 304, 1558, 1566, 1671, 1952, 2081
Mly113I	GGCGCC	1 cut(s)	408
MlyI	GAGTC	2 cut(s)	2225, 2363
MmeI	TCCRAC	4 cut(s)	186, 306, 840, 1062
Mph1103I	ATGCAT	1 cut(s)	1996
MslI	CAYNNNNRTG	1 cut(s)	458
MspCI	CTTAAG	1 cut(s)	1817
MspI	CCGG	7 cut(s)	478, 911, 957, 1016, 1751, 1887, 1966
MspR9I	CCNGG	2 cut(s)	958, 1834
MvaI	CCWGG	1 cut(s)	1834
MvnI	CGCG	1 cut(s)	443
MwoI	GCNNNNNNNGC	5 cut(s)	339, 437, 478, 487, 2441
NarI	GGCGCC	1 cut(s)	408
NciI	CCSGG	1 cut(s)	958
NdeII	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
NlaIII	CATG	8 cut(s)	1468, 1679, 1691, 1767, 1942, 2264, 2376, 2458
NlaIV	GGNNCC	6 cut(s)	197, 409, 476, 955, 1014, 2094
NmeAIII	GCCGAG	1 cut(s)	831
NmuCI	GTSAC	6 cut(s)	1024, 1234, 1444, 1549, 2104, 2342
NsiI	ATGCAT	1 cut(s)	1996
NspI	RCATGY	4 cut(s)	1767, 2264, 2376, 2458
PaqCI	CACCTGC	1 cut(s)	865
PciI	ACATGT	4 cut(s)	1763, 2260, 2372, 2454
PciSI	GCTCTTC	1 cut(s)	455
PcsI	WCGNNNNNNNCGW	1 cut(s)	1034
PfeI	GAWTC	4 cut(s)	577, 2114, 2126, 2132
PinAI	ACCGGT	1 cut(s)	1965
PkrI	GCNGC	6 cut(s)	364, 377, 442, 447, 471, 2407
PleI	GAGTC	2 cut(s)	2224, 2362
PluTI	GGCGCC	1 cut(s)	411
PpsI	GAGTC	2 cut(s)	2224, 2362
Ppu21I	YACGTR	2 cut(s)	819, 1029
PpuMI	RGGWCCY	1 cut(s)	1534
PscI	ACATGT	4 cut(s)	1763, 2260, 2372, 2454
Psp5II	RGGWCCY	1 cut(s)	1534
Psp6I	CCWGG	1 cut(s)	1832
PspEI	GGTNACC	2 cut(s)	1444, 2104
PspFI	CCCAGC	2 cut(s)	371, 2444
PspGI	CCWGG	1 cut(s)	1832
PspN4I	GGNNCC	6 cut(s)	197, 409, 476, 955, 1014, 2094
PspOMI	GGGCCC	1 cut(s)	195
PspPI	GGNCC	6 cut(s)	195, 196, 385, 1534, 2073, 2093
PspPPI	RGGWCCY	1 cut(s)	1534
PstI	CTGCAG	1 cut(s)	2425
PsuI	RGATCY	1 cut(s)	2485
RsaI	GTAC	3 cut(s)	476, 2362, 2479
RsaNI	GTAC	3 cut(s)	475, 2361, 2478
RseI	CAYNNNNRTG	1 cut(s)	458
SapI	GCTCTTC	1 cut(s)	455
SatI	GCNGC	6 cut(s)	363, 376, 441, 446, 470, 2406
Sau3AI	GATC	5 cut(s)	1461, 1597, 1881, 2160, 2485
Sau96I	GGNCC	6 cut(s)	195, 196, 385, 1534, 2073, 2093
SchI	GAGTC	2 cut(s)	2225, 2363
ScrFI	CCNGG	2 cut(s)	958, 1834
SduI	GDGCHC	4 cut(s)	123, 199, 492, 2437
SfaNI	GCATC	7 cut(s)	562, 646, 1460, 1849, 1981, 2185, 2375
SfcI	CTRYAG	1 cut(s)	2421
SfoI	GGCGCC	1 cut(s)	409
SinI	GGWCC	3 cut(s)	1534, 2073, 2093
SmiMI	CAYNNNNRTG	1 cut(s)	458
SmlI	CTYRAG	2 cut(s)	1091, 1817
SmoI	CTYRAG	2 cut(s)	1091, 1817
Sse9I	AATT	7 cut(s)	275, 304, 1558, 1566, 1671, 1952, 2081
SspDI	GGCGCC	1 cut(s)	407
SspI	AATATT	2 cut(s)	826, 1771
SspMI	CTAG	8 cut(s)	155, 603, 870, 1385, 1542, 1640, 2144, 2439
StyD4I	CCNGG	2 cut(s)	956, 1832
StyI	CCWWGG	2 cut(s)	381, 2438
TaaI	ACNGT	2 cut(s)	724, 1788
TaiI	ACGT	6 cut(s)	423, 821, 926, 1031, 1040, 1857
TaqI	TCGA	4 cut(s)	39, 393, 1857, 2219
TaqII	GACCGA	1 cut(s)	131
TasI	AATT	7 cut(s)	275, 304, 1558, 1566, 1671, 1952, 2081
TatI	WGTACW	2 cut(s)	2360, 2477
TauI	GCSGC	3 cut(s)	365, 378, 443
TfiI	GAWTC	4 cut(s)	577, 2114, 2126, 2132
TscAI	CASTG	2 cut(s)	197, 1589
TseFI	GTSAC	6 cut(s)	1024, 1234, 1444, 1549, 2104, 2342
TseI	GCWGC	3 cut(s)	445, 469, 2405
Tsp45I	GTSAC	6 cut(s)	1024, 1234, 1444, 1549, 2104, 2342
TspRI	CASTG	2 cut(s)	197, 1589
Vha464I	CTTAAG	1 cut(s)	1817
VneI	GTGCAC	1 cut(s)	2433
VpaK11BI	GGWCC	3 cut(s)	1534, 2073, 2093
XapI	RAATTY	1 cut(s)	275
XceI	RCATGY	4 cut(s)	1767, 2264, 2376, 2458
XmaJI	CCTAGG	1 cut(s)	2438
XmiI	GTMKAC	1 cut(s)	1970
XspI	CTAG	8 cut(s)	155, 603, 870, 1385, 1542, 1640, 2144, 2439
ZraI	GACGTC	1 cut(s)	1855
Zsp2I	ATGCAT	1 cut(s)	1996

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.