FvH4_7g24680
NAC Family

GDP-Man Man(3)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
19036686 .. 19040058
3373 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g24680.t1

Sequence Viewer

Length: 1395 bp
ATGGCTGCTTACCGATTCTTCATCTGGCCTCTCATCACTCTCCTATCCGCCTTACTCCTCAAAATCTCCCTCCAAATATTCACCGCCAGAAACCACCGCAAGCGCGCCGTCGCCTTCTTCCACCCCTACACCAACGACGGCGGCGGCGGCGAGCGTGTCCTCTGGTGCGCTGTCAAAGCCATCCAGGACGAAAACCCCAACCTCGACTGCCTCGTCTTCACCGGCGACCACGACTCCTCCCCTGACTCCCTCACTTCCCGCGCCGTCGATCGCTTCGGAGTCAAACTGCTCCGCCCACCACAGGTGGTGCATCTGAACAAGCGGAAATGGATCGAGGAGGCTACGTATCCGAGATTGACTATGATCGGGCAGAGCTTGGGCTCTGTGTATCTGTCATGGGAGGCATTGACTAAGTACACTCCAGATTACTATTTCGACACGAGTGGATATGCATTTACATATCCAATTGCGAGGCTGTTTGGTTGTAGAGTCATCTGTTATACACATTACCCTACAATCAGCTTGGACATGCTCTCTCGGGTTCGACAGCGGAGCTCCATGTACAACAATGATGACTTCGTTGCTCGCAGTGAGTGGTTGTCACGGTGCAAGGTTGTGTATTACAATGTGTTTAGCTGGATGTACGGGATTGTAGGCTCGTGTGCTCATCTGGCCATGGTGAACTCTTCGTGGACTCAGGCGCATATACAGAAGCTGTGGAAGATTCCGCAGCGTATTAAGCGAGTGTACCCTCCTTGCGATACTTCTGGACTTCAGGTGCTTCCTTTGGAAAGACCAGCTGATCCTGCAAAAATCATATCTGTTGCTCAGTTTCGGCCAGAGAAGGCACATGGTCTCCAACTTGAGGCCTTTGCAGTTGCCGTAGGGAAATTAGATGCACACTTGCCCAGACCTAAGCTGCAGTTTGTGGGTAGTTGTCGGAATAAATCAGATGAGGAAAGACTAGAACATCTGAAAAATAAAGCAATTGAGCTGAAGGTGGATGGGGATGTGGAATTTCATAAAAATGTCATGTACAGGGACTTGGTACAACTTTTGGGTGGTGCCGTTGCAGGAATTCATTCAATGACAGATGAACACTTTGGAATAAGTGTTGTGGAGTATATGGCTGCAGGAGCCATCCCAATTGCACACAATTCTGCCGGCCCACAGATGGACATTGTTCTAGCAGAAGATGGAGAGCAAACAGGATTCCTTGCCCGCACTGTGGATGAATATGCAGATGCCATCCTCAGTGTCATAAAGATGCCAGAAACTGAGAGGTTCAAGATGGCTGCAGCTGCAAGGCGACGGGCTGCCAGATTTTCTGAGCAAAGATTTTATGAAGATTTCAAAGCTGCAATCTCTCCGATACTACCCAGTAATTCCACATAA

Protein Analysis

465

Amino Acids

52.5

Weight (kDa)

8.84

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALG11_N PF15924 35 - 240 6.9e-89 ALG11 mannosyltransferase N-terminus
Glycos_transf_1 PF00534 265 - 437 2.6e-23 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 271 - 421 3.3e-12 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011501)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 212
AccB1I GGYRCC 1 cut(s) 1064
AccII CGCG 2 cut(s) 105, 261
AclWI GGATC 2 cut(s) 338, 797
AcoI YGGCCR 2 cut(s) 672, 836
AcsI RAATTY 2 cut(s) 1016, 1077
AcuI CTGAAG 2 cut(s) 758, 1016
AfaI GTAC 6 cut(s) 416, 563, 644, 749, 1037, 1050
AfiI CCNNNNNNNGG 4 cut(s) 301, 865, 1174, 1228
AgsI TTSAA 3 cut(s) 1086, 1288, 1354
AjnI CCWGG 1 cut(s) 183
Alw21I GWGCWC 2 cut(s) 557, 667
Alw26I GTCTC 1 cut(s) 860
AlwI GGATC 2 cut(s) 338, 797
AlwNI CAGNNNCTG 2 cut(s) 715, 1277
Ama87I CYCGRG 1 cut(s) 537
AoxI GGCC 5 cut(s) 26, 672, 836, 867, 1165
ApeKI GCWGC 9 cut(s) 5, 730, 919, 1130, 1295, 1298, 1301, 1316, 1358
ApoI RAATTY 2 cut(s) 1016, 1077
Asp700I GAANNNNTTC 1 cut(s) 1081
AspLEI GCGC 5 cut(s) 105, 107, 170, 263, 703
AspS9I GGNCC 1 cut(s) 1166
AsuHPI GGTGA 3 cut(s) 73, 211, 691
AvaI CYCGRG 1 cut(s) 537
BalI TGGCCA 1 cut(s) 674
BanI GGYRCC 1 cut(s) 1064
BanII GRGCYC 2 cut(s) 383, 557
BauI CACGAG 2 cut(s) 439, 658
BbsI GAAGAC 1 cut(s) 208
Bbv12I GWGCWC 2 cut(s) 557, 667
BbvI GCAGC 8 cut(s) 742, 906, 1117, 1282, 1288, 1303, 1310, 1345
BccI CCATC 7 cut(s) 188, 998, 1148, 1168, 1190, 1256, 1285
BceAI ACGGC 5 cut(s) 92, 154, 248, 866, 1052
BciT130I CCWGG 1 cut(s) 185
BciVI GTATCC 1 cut(s) 357
BcoDI GTCTC 1 cut(s) 860
BfaI CTAG 2 cut(s) 965, 1187
BfmI CTRYAG 3 cut(s) 920, 1131, 1296
BfuI GTATCC 1 cut(s) 357
Bme1390I CCNGG 1 cut(s) 185
BmeT110I CYCGRG 1 cut(s) 537
BmgT120I GGNCC 1 cut(s) 1166
BmiI GGNNCC 2 cut(s) 1066, 1138
BmrFI CCNGG 1 cut(s) 185
BmrI ACTGGG 1 cut(s) 1374
BmsI GCATC 4 cut(s) 319, 886, 1234, 1257
BmuI ACTGGG 1 cut(s) 1374
BpiI GAAGAC 1 cut(s) 208
BpmI CTGGAG 1 cut(s) 405
Bpu10I CCTNAGC 1 cut(s) 915
BpuEI CTTGAG 1 cut(s) 884
BsaAI YACGTR 1 cut(s) 345
BsaI GGTCTC 1 cut(s) 860
BsaJI CCNNGG 1 cut(s) 675
BsaXI ACNNNNNCTCC 8 cut(s) 218, 221, 248, 251, 329, 359, 840, 870
Bsc4I CCNNNNNNNGG 4 cut(s) 301, 865, 1174, 1228
Bse118I RCCGGY 2 cut(s) 221, 1163
Bse1I ACTGG 1 cut(s) 1380
BseBI CCWGG 1 cut(s) 185
BseDI CCNNGG 1 cut(s) 675
BseGI GGATG 7 cut(s) 180, 645, 1009, 1015, 1140, 1237, 1248
BseLI CCNNNNNNNGG 4 cut(s) 301, 865, 1174, 1228
BseMII CTCAG 5 cut(s) 710, 842, 1267, 1269, 1320
BseNI ACTGG 1 cut(s) 1380
BsePI GCGCGC 1 cut(s) 103
BseRI GAGGAG 3 cut(s) 47, 226, 350
BseXI GCAGC 8 cut(s) 742, 906, 1117, 1282, 1288, 1303, 1310, 1345
Bsh1236I CGCG 2 cut(s) 105, 261
Bsh1285I CGRYCG 1 cut(s) 271
BshFI GGCC 5 cut(s) 28, 674, 838, 869, 1167
BshNI GGYRCC 1 cut(s) 1064
BsiEI CGRYCG 1 cut(s) 271
BsiHKAI GWGCWC 2 cut(s) 557, 667
BsiHKCI CYCGRG 1 cut(s) 537
BsiSI CCGG 2 cut(s) 222, 1164
BslFI GGGAC 1 cut(s) 1055
BslI CCNNNNNNNGG 4 cut(s) 301, 865, 1174, 1228
BsmAI GTCTC 1 cut(s) 860
BsmFI GGGAC 1 cut(s) 1055
BsnI GGCC 5 cut(s) 28, 674, 838, 869, 1167
Bso31I GGTCTC 1 cut(s) 860
BsoBI CYCGRG 1 cut(s) 537
Bsp1286I GDGCHC 3 cut(s) 383, 557, 667
Bsp1407I TGTACA 2 cut(s) 561, 1035
Bsp143I GATC 4 cut(s) 268, 330, 363, 802
Bsp19I CCATGG 1 cut(s) 675
BspANI GGCC 5 cut(s) 28, 674, 838, 869, 1167
BspCNI CTCAG 5 cut(s) 709, 841, 1266, 1270, 1321
BspFNI CGCG 2 cut(s) 105, 261
BspLI GGNNCC 2 cut(s) 1066, 1138
BspMAI CTGCAG 3 cut(s) 924, 1135, 1300
BspPI GGATC 2 cut(s) 338, 797
BspT107I GGYRCC 1 cut(s) 1064
BspTNI GGTCTC 1 cut(s) 860
BsrFI RCCGGY 2 cut(s) 221, 1163
BsrGI TGTACA 2 cut(s) 561, 1035
BsrI ACTGG 1 cut(s) 1380
BssAI RCCGGY 2 cut(s) 221, 1163
BssECI CCNNGG 1 cut(s) 675
BssHII GCGCGC 1 cut(s) 103
BssMI GATC 4 cut(s) 268, 330, 363, 802
BssSI CACGAG 2 cut(s) 439, 658
BssT1I CCWWGG 1 cut(s) 675
Bst2BI CACGAG 2 cut(s) 439, 658
Bst2UI CCWGG 1 cut(s) 185
Bst4CI ACNGT 2 cut(s) 606, 1228
Bst6I CTCTTC 1 cut(s) 691
BstAUI TGTACA 2 cut(s) 561, 1035
BstBAI YACGTR 1 cut(s) 345
BstC8I GCNNGC 6 cut(s) 101, 105, 152, 586, 1165, 1222
BstDEI CTNAG 7 cut(s) 411, 696, 828, 915, 1253, 1278, 1329
BstDSI CCRYGG 1 cut(s) 675
BstF5I GGATG 7 cut(s) 180, 645, 1009, 1015, 1140, 1237, 1248
BstFNI CGCG 2 cut(s) 105, 261
BstHHI GCGC 5 cut(s) 105, 107, 170, 263, 703
BstKTI GATC 4 cut(s) 271, 333, 366, 805
BstMAI GTCTC 1 cut(s) 860
BstMBI GATC 4 cut(s) 268, 330, 363, 802
BstMCI CGRYCG 1 cut(s) 271
BstMWI GCNNNNNNNGC 7 cut(s) 147, 176, 671, 739, 806, 1136, 1301
BstNI CCWGG 1 cut(s) 185
BstNSI RCATGY 1 cut(s) 532
BstSCI CCNGG 1 cut(s) 183
BstSFI CTRYAG 3 cut(s) 920, 1131, 1296
BstSNI TACGTA 1 cut(s) 345
BstUI CGCG 2 cut(s) 105, 261
BstV1I GCAGC 8 cut(s) 742, 906, 1117, 1282, 1288, 1303, 1310, 1345
BstV2I GAAGAC 1 cut(s) 208
BsuI GTATCC 1 cut(s) 357
BsuRI GGCC 5 cut(s) 28, 674, 838, 869, 1167
BtgI CCRYGG 1 cut(s) 675
BtsCI GGATG 7 cut(s) 180, 645, 1009, 1015, 1140, 1237, 1248
BtsI GCAGTG 1 cut(s) 595
BtsIMutI CAGTG 3 cut(s) 595, 1224, 1261
Cac8I GCNNGC 6 cut(s) 101, 105, 152, 586, 1165, 1222
CaiI CAGNNNCTG 2 cut(s) 715, 1277
CfoI GCGC 5 cut(s) 105, 107, 170, 263, 703
Cfr10I RCCGGY 2 cut(s) 221, 1163
Cfr13I GGNCC 1 cut(s) 1166
Csp6I GTAC 6 cut(s) 415, 562, 643, 748, 1036, 1049
CviAII CATG 6 cut(s) 396, 529, 559, 676, 851, 1033
CviQI GTAC 6 cut(s) 415, 562, 643, 748, 1036, 1049
DdeI CTNAG 7 cut(s) 411, 696, 828, 915, 1253, 1278, 1329
DpnI GATC 4 cut(s) 270, 332, 365, 804
DpnII GATC 4 cut(s) 268, 330, 363, 802
DrdI GACNNNNNNGTC 1 cut(s) 212
DseDI GACNNNNNNGTC 1 cut(s) 212
EaeI YGGCCR 2 cut(s) 672, 836
Eam1104I CTCTTC 1 cut(s) 691
EarI CTCTTC 1 cut(s) 691
EciI GGCGGA 2 cut(s) 37, 281
Ecl136II GAGCTC 1 cut(s) 555
Eco105I TACGTA 1 cut(s) 345
Eco130I CCWWGG 1 cut(s) 675
Eco147I AGGCCT 1 cut(s) 869
Eco24I GRGCYC 2 cut(s) 383, 557
Eco31I GGTCTC 1 cut(s) 860
Eco53kI GAGCTC 1 cut(s) 555
Eco57I CTGAAG 2 cut(s) 758, 1016
Eco88I CYCGRG 1 cut(s) 537
EcoICRI GAGCTC 1 cut(s) 555
EcoRI GAATTC 1 cut(s) 1077
EcoRII CCWGG 1 cut(s) 183
EcoT14I CCWWGG 1 cut(s) 675
EcoT22I ATGCAT 1 cut(s) 454
EcoT38I GRGCYC 2 cut(s) 383, 557
ErhI CCWWGG 1 cut(s) 675
FaeI CATG 6 cut(s) 399, 532, 562, 679, 854, 1036
FaqI GGGAC 1 cut(s) 1055
FatI CATG 6 cut(s) 395, 528, 558, 675, 850, 1032
FauI CCCGC 2 cut(s) 266, 1229
FokI GGATG 7 cut(s) 167, 652, 1016, 1022, 1127, 1235, 1244
FriOI GRGCYC 2 cut(s) 383, 557
FspBI CTAG 2 cut(s) 965, 1187
GlaI GCGC 5 cut(s) 104, 106, 169, 262, 702
GsuI CTGGAG 1 cut(s) 405
HaeIII GGCC 5 cut(s) 28, 674, 838, 869, 1167
HapII CCGG 2 cut(s) 222, 1164
HhaI GCGC 5 cut(s) 105, 107, 170, 263, 703
Hin1II CATG 6 cut(s) 399, 532, 562, 679, 854, 1036
Hin6I GCGC 5 cut(s) 103, 105, 168, 261, 701
HinP1I GCGC 5 cut(s) 103, 105, 168, 261, 701
HinfI GANTC 8 cut(s) 15, 233, 245, 279, 489, 694, 724, 1212
HpaII CCGG 2 cut(s) 222, 1164
HphI GGTGA 3 cut(s) 73, 211, 691
Hpy166II GTNNAC 4 cut(s) 417, 682, 693, 748
Hpy188I TCNGA 8 cut(s) 278, 315, 351, 942, 952, 975, 1330, 1371
Hpy188III TCNNGA 3 cut(s) 422, 768, 1288
Hpy8I GTNNAC 4 cut(s) 417, 682, 693, 748
Hpy99I CGWCG 4 cut(s) 113, 140, 269, 1314
HpyAV CCTTC 3 cut(s) 124, 838, 991
HpyCH4III ACNGT 2 cut(s) 606, 1228
HpyCH4IV ACGT 1 cut(s) 344
HpyF10VI GCNNNNNNNGC 7 cut(s) 147, 176, 671, 739, 806, 1136, 1301
HpyF3I CTNAG 7 cut(s) 411, 696, 828, 915, 1253, 1278, 1329
HpySE526I ACGT 1 cut(s) 344
Hsp92II CATG 6 cut(s) 399, 532, 562, 679, 854, 1036
HspAI GCGC 5 cut(s) 103, 105, 168, 261, 701
KroI GCCGGC 1 cut(s) 1163
KroNI GCCGGC 1 cut(s) 1165
Kzo9I GATC 4 cut(s) 268, 330, 363, 802
LmnI GCTCC 4 cut(s) 294, 552, 560, 1136
Lsp1109I GCAGC 8 cut(s) 742, 906, 1117, 1282, 1288, 1303, 1310, 1345
LweI GCATC 4 cut(s) 319, 886, 1234, 1257
MaeI CTAG 2 cut(s) 965, 1187
MaeII ACGT 1 cut(s) 344
MaeIII GTNAC 1 cut(s) 600
MalI GATC 4 cut(s) 270, 332, 365, 804
MboI GATC 4 cut(s) 268, 330, 363, 802
MboII GAAGA 7 cut(s) 10, 109, 208, 678, 733, 1205, 1358
MfeI CAATTG 3 cut(s) 465, 987, 1146
MhlI GDGCHC 3 cut(s) 383, 557, 667
MlsI TGGCCA 1 cut(s) 674
MluCI AATT 8 cut(s) 465, 890, 987, 1016, 1077, 1146, 1156, 1384
MluNI TGGCCA 1 cut(s) 674
MlyI GAGTC 5 cut(s) 227, 239, 288, 498, 688
MmeI TCCRAC 2 cut(s) 883, 920
Mox20I TGGCCA 1 cut(s) 674
Mph1103I ATGCAT 1 cut(s) 454
MroNI GCCGGC 1 cut(s) 1163
MroXI GAANNNNTTC 1 cut(s) 1081
MscI TGGCCA 1 cut(s) 674
MseI TTAA 1 cut(s) 738
MslI CAYNNNNRTG 2 cut(s) 1026, 1265
Msp20I TGGCCA 1 cut(s) 674
MspA1I CMGCKG 3 cut(s) 550, 800, 1301
MspI CCGG 2 cut(s) 222, 1164
MspR9I CCNGG 1 cut(s) 185
MunI CAATTG 3 cut(s) 465, 987, 1146
MvaI CCWGG 1 cut(s) 185
MvnI CGCG 2 cut(s) 105, 261
MwoI GCNNNNNNNGC 7 cut(s) 147, 176, 671, 739, 806, 1136, 1301
NaeI GCCGGC 1 cut(s) 1165
NcoI CCATGG 1 cut(s) 675
NdeII GATC 4 cut(s) 268, 330, 363, 802
NgoMIV GCCGGC 1 cut(s) 1163
NlaIII CATG 6 cut(s) 399, 532, 562, 679, 854, 1036
NlaIV GGNNCC 2 cut(s) 1066, 1138
NmuCI GTSAC 1 cut(s) 600
NsiI ATGCAT 1 cut(s) 454
NspI RCATGY 1 cut(s) 532
PauI GCGCGC 1 cut(s) 103
PceI AGGCCT 1 cut(s) 869
PcsI WCGNNNNNNNCGW 1 cut(s) 210
PdiI GCCGGC 1 cut(s) 1165
PdmI GAANNNNTTC 1 cut(s) 1081
PfeI GAWTC 3 cut(s) 15, 724, 1212
PfoI TCCNGGA 1 cut(s) 183
Ple19I CGATCG 1 cut(s) 271
PleI GAGTC 5 cut(s) 227, 239, 287, 497, 688
PpsI GAGTC 5 cut(s) 227, 239, 287, 497, 688
Ppu21I YACGTR 1 cut(s) 345
Psp124BI GAGCTC 1 cut(s) 557
Psp6I CCWGG 1 cut(s) 183
PspGI CCWGG 1 cut(s) 183
PspN4I GGNNCC 2 cut(s) 1066, 1138
PspPI GGNCC 1 cut(s) 1166
PstI CTGCAG 3 cut(s) 924, 1135, 1300
PstNI CAGNNNCTG 2 cut(s) 715, 1277
PteI GCGCGC 1 cut(s) 103
PvuI CGATCG 1 cut(s) 271
PvuII CAGCTG 2 cut(s) 800, 1301
RsaI GTAC 6 cut(s) 416, 563, 644, 749, 1037, 1050
RsaNI GTAC 6 cut(s) 415, 562, 643, 748, 1036, 1049
RseI CAYNNNNRTG 2 cut(s) 1026, 1265
SacI GAGCTC 1 cut(s) 557
SaqAI TTAA 1 cut(s) 738
Sau3AI GATC 4 cut(s) 268, 330, 363, 802
Sau96I GGNCC 1 cut(s) 1166
SchI GAGTC 5 cut(s) 227, 239, 288, 498, 688
ScrFI CCNGG 1 cut(s) 185
SduI GDGCHC 3 cut(s) 383, 557, 667
SfaNI GCATC 4 cut(s) 319, 886, 1234, 1257
SfcI CTRYAG 3 cut(s) 920, 1131, 1296
SgrAI CRCCGGYG 1 cut(s) 221
SmiMI CAYNNNNRTG 2 cut(s) 1026, 1265
SmlI CTYRAG 1 cut(s) 863
SmoI CTYRAG 1 cut(s) 863
SnaBI TACGTA 1 cut(s) 345
Sse9I AATT 8 cut(s) 465, 890, 987, 1016, 1077, 1146, 1156, 1384
SseBI AGGCCT 1 cut(s) 869
SspI AATATT 1 cut(s) 78
SspMI CTAG 2 cut(s) 965, 1187
SstI GAGCTC 1 cut(s) 557
StuI AGGCCT 1 cut(s) 869
StyD4I CCNGG 1 cut(s) 183
StyI CCWWGG 1 cut(s) 675
TaaI ACNGT 2 cut(s) 606, 1228
TaiI ACGT 1 cut(s) 347
TaqI TCGA 5 cut(s) 204, 267, 333, 435, 544
TasI AATT 8 cut(s) 465, 890, 987, 1016, 1077, 1146, 1156, 1384
TatI WGTACW 3 cut(s) 414, 561, 1035
TauI GCSGC 3 cut(s) 144, 147, 150
TfiI GAWTC 3 cut(s) 15, 724, 1212
Tru1I TTAA 1 cut(s) 738
Tru9I TTAA 1 cut(s) 738
TscAI CASTG 3 cut(s) 595, 1231, 1261
TseFI GTSAC 1 cut(s) 600
TseI GCWGC 9 cut(s) 5, 730, 919, 1130, 1295, 1298, 1301, 1316, 1358
Tsp45I GTSAC 1 cut(s) 600
TspDTI ATGAA 6 cut(s) 10, 1010, 1070, 1110, 1248, 1359
TspRI CASTG 3 cut(s) 595, 1231, 1261
XapI RAATTY 2 cut(s) 1016, 1077
XceI RCATGY 1 cut(s) 532
XmnI GAANNNNTTC 1 cut(s) 1081
XspI CTAG 2 cut(s) 965, 1187
Zsp2I ATGCAT 1 cut(s) 454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.