Rmu_sc0021895.1_g000001
NAC Family

GDP-Man Man(3)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0021895.1
Physical Location & Seq
Forward (+)
1645 .. 4683
3039 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0021895.1_g000001.1.cds

Sequence Viewer

Length: 1392 bp
atgccttaccaattcttcctttggcctctgatcactgttctatccgccttaatcctcagaatctctctacaaattttcaccgccagaagcaaccgccaccgcgccgtcgcattcttccacccctacaccaacgacggcggcggcggcgagagagtgctctggtgcgccgtcaaagccatccaggacgaaaaccccaaccttgactgcgtcgtcttcaccggcgaccacgactcctcccctgactcactcacgtcccgagccgtcgatcgctttggagtcaaactacttcacccaccaaaggtggtgcttctgtacaagcggaaatggatcgaggaagccacgtaccctagattgactatgatcgggcagagcctgggctctgtgtatctatcgtgggaagcattgaccaagttcactccagcttactatttcgacaccagtggatacgccttcacttacccaattgcgaggctatttggttgcagagtcagctgctacacacattaccctacaatcagcttggacatgctctcccgggttcgccagcggagctccatgtacaacaatgatgacttcattgctcggagcaattggttatcgcactgcaagattgtgtactacaatgtgtttagctggatgtatgggactgtaggctcttgtgcacatcttgccatggtcaactcttcgtggactcagtcccatatacagaagctgtggaagattccgcagcgtactaagcgtgtctaccctccttgcgatacttctggacttcaggtgcttcctttggaaagactagctgatcctgcaaaaatcatatctgttgctcagtttcggccagagaaggcacatggtctccaacttgaggcctttgcagttgcaatagggaaattagatgcacacttgcccagacctaagctgcagtttgtgggtagttgtcggaataaatcagatgaggaaagattagaacatctgaaaaataaagcaattgagctgaaggtggacggggacgtggaatttcataaaaatgtcatgtacagggacttggtgcaacttttgggcggagccgttgcagggatccattcaatgacagatgaacacttcggaataagtgttgtggagtatatggctgcaggagccatcccaattgcgcacaattctgctggcccacagatggacattgttttagcagaagatggagagcaaacaggatttcttgcccgcactgttgaggaatatgcagatgccatcctcagtgtcttaaagatgccagaaactgataggctcaagatggctgcagctgcaaggcgacgggctgccagattttctgagcaaaaattctatgaagacttcaaagctgcaatctctccaatactacccagtaattccacataa

Protein Analysis

463

Amino Acids

52.26

Weight (kDa)

8.73

Isoelectric Point (pI)

47.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0011501)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
Acc16I TGCGCA 1 cut(s) 1149
AccI GTMKAC 1 cut(s) 744
AccII CGCG 1 cut(s) 102
AclWI GGATC 4 cut(s) 335, 794, 1069, 1082
AcoI YGGCCR 1 cut(s) 833
AcsI RAATTY 3 cut(s) 72, 1013, 1334
AcuI CTGAAG 2 cut(s) 755, 1013
AfaI GTAC 6 cut(s) 314, 344, 560, 617, 733, 1034
AfiI CCNNNNNNNGG 4 cut(s) 298, 862, 1071, 1171
AgsI TTSAA 2 cut(s) 1083, 1351
AjiI CACGTC 2 cut(s) 252, 1009
AjnI CCWGG 2 cut(s) 180, 372
Alw21I GWGCWC 3 cut(s) 159, 554, 664
Alw26I GTCTC 1 cut(s) 857
Alw44I GTGCAC 1 cut(s) 660
AlwI GGATC 4 cut(s) 335, 794, 1069, 1082
AlwNI CAGNNNCTG 3 cut(s) 373, 712, 1274
Ama87I CYCGRG 2 cut(s) 255, 534
AoxI GGCC 4 cut(s) 23, 833, 864, 1162
ApaLI GTGCAC 1 cut(s) 660
ApeKI GCWGC 9 cut(s) 492, 727, 916, 1127, 1292, 1295, 1298, 1313, 1355
ApoI RAATTY 3 cut(s) 72, 1013, 1334
AspLEI GCGC 3 cut(s) 104, 167, 1150
AspS9I GGNCC 1 cut(s) 1163
AsuC2I CCSGG 2 cut(s) 535, 536
AsuHPI GGTGA 3 cut(s) 70, 208, 281
AvaI CYCGRG 2 cut(s) 255, 534
BaeGI GKGCMC 1 cut(s) 664
BamHI GGATCC 1 cut(s) 1074
BanII GRGCYC 2 cut(s) 380, 554
BbsI GAAGAC 2 cut(s) 205, 1350
Bbv12I GWGCWC 3 cut(s) 159, 554, 664
BbvI GCAGC 9 cut(s) 479, 739, 903, 1114, 1279, 1285, 1300, 1307, 1342
BccI CCATC 6 cut(s) 185, 1145, 1165, 1187, 1253, 1282
BceAI ACGGC 5 cut(s) 89, 151, 152, 245, 1049
BciT130I CCWGG 2 cut(s) 182, 374
BciVI GTATCC 1 cut(s) 437
BclI TGATCA 1 cut(s) 30
BcnI CCSGG 2 cut(s) 535, 536
BcoDI GTCTC 1 cut(s) 857
BfaI CTAG 2 cut(s) 348, 794
BfmI CTRYAG 4 cut(s) 648, 917, 1128, 1293
BfuI GTATCC 1 cut(s) 437
Bme1390I CCNGG 4 cut(s) 182, 374, 535, 536
BmeT110I CYCGRG 2 cut(s) 255, 534
BmgBI CACGTC 2 cut(s) 252, 1009
BmgT120I GGNCC 1 cut(s) 1163
BmiI GGNNCC 3 cut(s) 1063, 1076, 1135
BmrFI CCNGG 4 cut(s) 182, 374, 535, 536
BmrI ACTGGG 1 cut(s) 1371
BmsI GCATC 3 cut(s) 883, 1231, 1254
BmuI ACTGGG 1 cut(s) 1371
BpiI GAAGAC 2 cut(s) 205, 1350
BpmI CTGGAG 1 cut(s) 402
Bpu10I CCTNAGC 1 cut(s) 912
BpuEI CTTGAG 2 cut(s) 881, 1268
BpuMI CCSGG 2 cut(s) 535, 536
BsaAI YACGTR 1 cut(s) 342
BsaI GGTCTC 1 cut(s) 857
BsaJI CCNNGG 3 cut(s) 373, 534, 672
BsaXI ACNNNNNCTCC 8 cut(s) 215, 218, 245, 248, 515, 545, 837, 867
Bsc4I CCNNNNNNNGG 4 cut(s) 298, 862, 1071, 1171
Bse118I RCCGGY 1 cut(s) 218
Bse1I ACTGG 2 cut(s) 438, 1377
Bse3DI GCAATG 1 cut(s) 576
BseBI CCWGG 2 cut(s) 182, 374
BseDI CCNNGG 3 cut(s) 373, 534, 672
BseGI GGATG 4 cut(s) 177, 642, 1137, 1245
BseLI CCNNNNNNNGG 4 cut(s) 298, 862, 1071, 1171
BseMI GCAATG 1 cut(s) 576
BseMII CTCAG 5 cut(s) 70, 707, 839, 1264, 1317
BseNI ACTGG 2 cut(s) 438, 1377
BseRI GAGGAG 1 cut(s) 223
BseSI GKGCMC 1 cut(s) 664
BseXI GCAGC 9 cut(s) 479, 739, 903, 1114, 1279, 1285, 1300, 1307, 1342
Bsh1236I CGCG 1 cut(s) 102
Bsh1285I CGRYCG 1 cut(s) 268
BshFI GGCC 4 cut(s) 25, 835, 866, 1164
BsiEI CGRYCG 1 cut(s) 268
BsiHKAI GWGCWC 3 cut(s) 159, 554, 664
BsiHKCI CYCGRG 2 cut(s) 255, 534
BsiSI CCGG 2 cut(s) 219, 535
BslFI GGGAC 5 cut(s) 238, 658, 682, 1019, 1052
BslI CCNNNNNNNGG 4 cut(s) 298, 862, 1071, 1171
BsmAI GTCTC 1 cut(s) 857
BsmFI GGGAC 5 cut(s) 238, 658, 682, 1019, 1052
BsmI GAATGC 1 cut(s) 110
BsnI GGCC 4 cut(s) 25, 835, 866, 1164
Bso31I GGTCTC 1 cut(s) 857
BsoBI CYCGRG 2 cut(s) 255, 534
Bsp1286I GDGCHC 4 cut(s) 159, 380, 554, 664
Bsp1407I TGTACA 3 cut(s) 312, 558, 1032
Bsp143I GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
Bsp19I CCATGG 1 cut(s) 672
BspANI GGCC 4 cut(s) 25, 835, 866, 1164
BspCNI CTCAG 5 cut(s) 69, 706, 838, 1263, 1318
BspFNI CGCG 1 cut(s) 102
BspLI GGNNCC 3 cut(s) 1063, 1076, 1135
BspMAI CTGCAG 3 cut(s) 921, 1132, 1297
BspPI GGATC 4 cut(s) 335, 794, 1069, 1082
BspTNI GGTCTC 1 cut(s) 857
BsrDI GCAATG 1 cut(s) 576
BsrFI RCCGGY 1 cut(s) 218
BsrGI TGTACA 3 cut(s) 312, 558, 1032
BsrI ACTGG 2 cut(s) 438, 1377
BssAI RCCGGY 1 cut(s) 218
BssECI CCNNGG 3 cut(s) 373, 534, 672
BssMI GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
BssT1I CCWWGG 1 cut(s) 672
Bst2UI CCWGG 2 cut(s) 182, 374
Bst4CI ACNGT 3 cut(s) 37, 649, 1225
Bst6I CTCTTC 1 cut(s) 688
BstAPI GCANNNNNTGC 1 cut(s) 668
BstAUI TGTACA 3 cut(s) 312, 558, 1032
BstBAI YACGTR 1 cut(s) 342
BstC8I GCNNGC 3 cut(s) 545, 1162, 1219
BstDEI CTNAG 7 cut(s) 56, 693, 735, 825, 912, 1250, 1326
BstDSI CCRYGG 1 cut(s) 672
BstF5I GGATG 4 cut(s) 177, 642, 1137, 1245
BstFNI CGCG 1 cut(s) 102
BstHHI GCGC 3 cut(s) 104, 167, 1150
BstKTI GATC 6 cut(s) 33, 268, 330, 363, 802, 1077
BstMAI GTCTC 1 cut(s) 857
BstMBI GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
BstMCI CGRYCG 1 cut(s) 268
BstMWI GCNNNNNNNGC 9 cut(s) 144, 173, 489, 549, 668, 736, 803, 1133, 1298
BstNI CCWGG 2 cut(s) 182, 374
BstNSI RCATGY 1 cut(s) 529
BstSCI CCNGG 4 cut(s) 180, 372, 533, 534
BstSFI CTRYAG 4 cut(s) 648, 917, 1128, 1293
BstSLI GKGCMC 1 cut(s) 664
BstUI CGCG 1 cut(s) 102
BstV1I GCAGC 9 cut(s) 479, 739, 903, 1114, 1279, 1285, 1300, 1307, 1342
BstV2I GAAGAC 2 cut(s) 205, 1350
BstX2I RGATCY 1 cut(s) 1074
BstYI RGATCY 1 cut(s) 1074
BsuI GTATCC 1 cut(s) 437
BsuRI GGCC 4 cut(s) 25, 835, 866, 1164
BtgI CCRYGG 1 cut(s) 672
BtrI CACGTC 2 cut(s) 252, 1009
BtsCI GGATG 4 cut(s) 177, 642, 1137, 1245
BtsI GCAGTG 1 cut(s) 601
BtsIMutI CAGTG 5 cut(s) 33, 445, 601, 1221, 1258
Cac8I GCNNGC 3 cut(s) 545, 1162, 1219
CaiI CAGNNNCTG 3 cut(s) 373, 712, 1274
CfoI GCGC 3 cut(s) 104, 167, 1150
Cfr10I RCCGGY 1 cut(s) 218
Cfr13I GGNCC 1 cut(s) 1163
Cfr9I CCCGGG 1 cut(s) 534
CseI GACGC 1 cut(s) 196
Csp6I GTAC 6 cut(s) 313, 343, 559, 616, 732, 1033
CviAII CATG 5 cut(s) 526, 556, 673, 848, 1030
CviQI GTAC 6 cut(s) 313, 343, 559, 616, 732, 1033
DdeI CTNAG 7 cut(s) 56, 693, 735, 825, 912, 1250, 1326
DpnI GATC 6 cut(s) 32, 267, 329, 362, 801, 1076
DpnII GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EaeI YGGCCR 1 cut(s) 833
Eam1104I CTCTTC 1 cut(s) 688
EarI CTCTTC 1 cut(s) 688
EciI GGCGGA 2 cut(s) 34, 1074
Ecl136II GAGCTC 1 cut(s) 552
Eco130I CCWWGG 1 cut(s) 672
Eco147I AGGCCT 1 cut(s) 866
Eco24I GRGCYC 2 cut(s) 380, 554
Eco31I GGTCTC 1 cut(s) 857
Eco53kI GAGCTC 1 cut(s) 552
Eco57I CTGAAG 2 cut(s) 755, 1013
Eco88I CYCGRG 2 cut(s) 255, 534
EcoICRI GAGCTC 1 cut(s) 552
EcoRII CCWGG 2 cut(s) 180, 372
EcoT14I CCWWGG 1 cut(s) 672
EcoT38I GRGCYC 2 cut(s) 380, 554
ErhI CCWWGG 1 cut(s) 672
FaeI CATG 5 cut(s) 529, 559, 676, 851, 1033
FaqI GGGAC 5 cut(s) 238, 658, 682, 1019, 1052
FatI CATG 5 cut(s) 525, 555, 672, 847, 1029
FauI CCCGC 1 cut(s) 1226
FbaI TGATCA 1 cut(s) 30
FblI GTMKAC 1 cut(s) 744
FokI GGATG 4 cut(s) 164, 649, 1124, 1232
FriOI GRGCYC 2 cut(s) 380, 554
FspBI CTAG 2 cut(s) 348, 794
FspI TGCGCA 1 cut(s) 1149
GlaI GCGC 3 cut(s) 103, 166, 1149
GsuI CTGGAG 1 cut(s) 402
HaeIII GGCC 4 cut(s) 25, 835, 866, 1164
HapII CCGG 2 cut(s) 219, 535
HgaI GACGC 1 cut(s) 196
HhaI GCGC 3 cut(s) 104, 167, 1150
Hin1II CATG 5 cut(s) 529, 559, 676, 851, 1033
Hin6I GCGC 3 cut(s) 102, 165, 1148
HinP1I GCGC 3 cut(s) 102, 165, 1148
HincII GTYRAC 1 cut(s) 679
HindII GTYRAC 1 cut(s) 679
HinfI GANTC 7 cut(s) 60, 230, 242, 276, 486, 691, 721
HpaII CCGG 2 cut(s) 219, 535
HphI GGTGA 3 cut(s) 70, 208, 281
Hpy166II GTNNAC 7 cut(s) 414, 616, 662, 679, 690, 745, 1000
Hpy188I TCNGA 8 cut(s) 30, 59, 585, 939, 949, 972, 1103, 1327
Hpy188III TCNNGA 3 cut(s) 255, 765, 1285
Hpy8I GTNNAC 7 cut(s) 414, 616, 662, 679, 690, 745, 1000
Hpy99I CGWCG 5 cut(s) 110, 137, 212, 266, 1311
HpyAV CCTTC 3 cut(s) 460, 835, 988
HpyCH4III ACNGT 3 cut(s) 37, 649, 1225
HpyCH4IV ACGT 3 cut(s) 251, 341, 1008
HpyF10VI GCNNNNNNNGC 9 cut(s) 144, 173, 489, 549, 668, 736, 803, 1133, 1298
HpyF3I CTNAG 7 cut(s) 56, 693, 735, 825, 912, 1250, 1326
HpySE526I ACGT 3 cut(s) 251, 341, 1008
Hsp92II CATG 5 cut(s) 529, 559, 676, 851, 1033
HspAI GCGC 3 cut(s) 102, 165, 1148
Ksp22I TGATCA 1 cut(s) 30
Kzo9I GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
LmnI GCTCC 5 cut(s) 549, 557, 585, 1061, 1133
Lsp1109I GCAGC 9 cut(s) 479, 739, 903, 1114, 1279, 1285, 1300, 1307, 1342
LweI GCATC 3 cut(s) 883, 1231, 1254
MaeI CTAG 2 cut(s) 348, 794
MaeII ACGT 3 cut(s) 251, 341, 1008
MalI GATC 6 cut(s) 32, 267, 329, 362, 801, 1076
MboI GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
MboII GAAGA 7 cut(s) 7, 106, 205, 675, 730, 1202, 1355
MfeI CAATTG 4 cut(s) 462, 589, 984, 1143
MflI RGATCY 1 cut(s) 1074
MhlI GDGCHC 4 cut(s) 159, 380, 554, 664
MlyI GAGTC 5 cut(s) 224, 236, 285, 495, 685
MmeI TCCRAC 2 cut(s) 880, 917
MseI TTAA 2 cut(s) 50, 1259
MslI CAYNNNNRTG 1 cut(s) 1023
MspA1I CMGCKG 3 cut(s) 492, 547, 1298
MspI CCGG 2 cut(s) 219, 535
MspR9I CCNGG 4 cut(s) 182, 374, 535, 536
MunI CAATTG 4 cut(s) 462, 589, 984, 1143
Mva1269I GAATGC 1 cut(s) 110
MvaI CCWGG 2 cut(s) 182, 374
MvnI CGCG 1 cut(s) 102
MwoI GCNNNNNNNGC 9 cut(s) 144, 173, 489, 549, 668, 736, 803, 1133, 1298
NciI CCSGG 2 cut(s) 535, 536
NcoI CCATGG 1 cut(s) 672
NdeII GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
NlaIII CATG 5 cut(s) 529, 559, 676, 851, 1033
NlaIV GGNNCC 3 cut(s) 1063, 1076, 1135
NsbI TGCGCA 1 cut(s) 1149
NspI RCATGY 1 cut(s) 529
PceI AGGCCT 1 cut(s) 866
PctI GAATGC 1 cut(s) 110
PfeI GAWTC 2 cut(s) 60, 721
PflFI GACNNNGTC 2 cut(s) 206, 694
PfoI TCCNGGA 1 cut(s) 180
Ple19I CGATCG 1 cut(s) 268
PleI GAGTC 5 cut(s) 224, 236, 284, 494, 685
PpsI GAGTC 5 cut(s) 224, 236, 284, 494, 685
Ppu21I YACGTR 1 cut(s) 342
Psp124BI GAGCTC 1 cut(s) 554
Psp6I CCWGG 2 cut(s) 180, 372
PspGI CCWGG 2 cut(s) 180, 372
PspN4I GGNNCC 3 cut(s) 1063, 1076, 1135
PspPI GGNCC 1 cut(s) 1163
PstI CTGCAG 3 cut(s) 921, 1132, 1297
PstNI CAGNNNCTG 3 cut(s) 373, 712, 1274
PsuI RGATCY 1 cut(s) 1074
PsyI GACNNNGTC 2 cut(s) 206, 694
PvuI CGATCG 1 cut(s) 268
PvuII CAGCTG 2 cut(s) 492, 1298
RsaI GTAC 6 cut(s) 314, 344, 560, 617, 733, 1034
RsaNI GTAC 6 cut(s) 313, 343, 559, 616, 732, 1033
RseI CAYNNNNRTG 1 cut(s) 1023
SacI GAGCTC 1 cut(s) 554
SaqAI TTAA 2 cut(s) 50, 1259
Sau3AI GATC 6 cut(s) 30, 265, 327, 360, 799, 1074
Sau96I GGNCC 1 cut(s) 1163
SchI GAGTC 5 cut(s) 224, 236, 285, 495, 685
ScrFI CCNGG 4 cut(s) 182, 374, 535, 536
SduI GDGCHC 4 cut(s) 159, 380, 554, 664
SfaNI GCATC 3 cut(s) 883, 1231, 1254
SfcI CTRYAG 4 cut(s) 648, 917, 1128, 1293
SgrAI CRCCGGYG 1 cut(s) 218
SmaI CCCGGG 1 cut(s) 536
SmiMI CAYNNNNRTG 1 cut(s) 1023
SmlI CTYRAG 2 cut(s) 860, 1283
SmoI CTYRAG 2 cut(s) 860, 1283
SseBI AGGCCT 1 cut(s) 866
SspMI CTAG 2 cut(s) 348, 794
SstI GAGCTC 1 cut(s) 554
StuI AGGCCT 1 cut(s) 866
StyD4I CCNGG 4 cut(s) 180, 372, 533, 534
StyI CCWWGG 1 cut(s) 672
TaaI ACNGT 3 cut(s) 37, 649, 1225
TaiI ACGT 3 cut(s) 254, 344, 1011
TaqI TCGA 3 cut(s) 264, 330, 432
TatI WGTACW 4 cut(s) 312, 558, 615, 1032
TauI GCSGC 3 cut(s) 141, 144, 147
TfiI GAWTC 2 cut(s) 60, 721
Tru1I TTAA 2 cut(s) 50, 1259
Tru9I TTAA 2 cut(s) 50, 1259
TscAI CASTG 5 cut(s) 40, 445, 608, 1228, 1258
TseI GCWGC 9 cut(s) 492, 727, 916, 1127, 1292, 1295, 1298, 1313, 1355
TspDTI ATGAA 4 cut(s) 565, 1007, 1107, 1356
TspMI CCCGGG 1 cut(s) 534
TspRI CASTG 5 cut(s) 40, 445, 608, 1228, 1258
Tth111I GACNNNGTC 2 cut(s) 206, 694
VneI GTGCAC 1 cut(s) 660
XapI RAATTY 3 cut(s) 72, 1013, 1334
XceI RCATGY 1 cut(s) 529
XmaI CCCGGG 1 cut(s) 534
XmiI GTMKAC 1 cut(s) 744
XspI CTAG 2 cut(s) 348, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.