pycom07g20250
NAC Family

GDP-Man Man(3)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
22408533 .. 22410782
2250 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g20250.1

Sequence Viewer

Length: 1311 bp
ATGGCTTACCAATTCGTGATTTGGGGTCTGATCACTGCTCTCTCGGCCCTGATCCTGAGAATCTCCCTCCAAATATCCACCGGCAGAAGCAACAGAAAACGCGCCGTCGCCTTCTTCCACCCCTACACCAATGACGGCGGCGGCGGGGAACGAGTCCTCTGGTGCGCCGTCAAAGCCATCCAGGACGAAAACCCCTCCCTTGACTGCCTCGTCTACACCGGCGACCACGACGCTTCCCCTCACTCCTTGACCGCCCGCGCGGTTGACCGCTTCGGCGTCAACCTCCTCCGCCAACCCAAGGTGGTGCATTTGAGCAAGAGGAAATGGATCGAGGAGGCCACCTACCCGCGGCTGACGATGATTGGGCAGAGCCTCGGCTCTGTCTACCTCTCATGGGAGGCGTTGACGAAGTTCACTCCAACTTTCTACTTCGACACCGCTGGCTATGCCTTCACGTACCCAATTGCCCGGCTGTTTGGTTGCAGGGTTATCTGCTACACCCATTACCCCACAATCAGCTGCGACATGCTCTCCCGGGTCCGCCTGCGGAGTTCCATGTACAACAATGACGACTTCATTGCTCGGAGCAATTGGTTGTCCAGCTGCAAAGTCGTATACTACAATTTGTTTAGCCGGATGTATGGGATTGTAGGATCTTGTGCTCATCTTGCCATGGTTAATTCGTCATGGACTCAGTCCCATATCGAAAAGCTCTGGAGCATTCCACAACGGACTAAGCGGGTCTACCCTCCTTGTGATACATCTGGACTTCAGGCACATGGTCTCCAACTTGAGGCCTTTGCAGTTGCCATAGGTAAATTAGATGCACACTTCCCCAGGCCTAAGCTTCAGTTTGTGGGTAGCTGTCGGAATAAAGCTGATGAGGAAAGAGTACAACGTTTGAAGGATAAAGCAATTGAACTGAAGTTGGACGGGGATGTAGAATTTCATAAAAATGTCATGTACAGGGACTTGGTTCAACTTTTGGGAGGAGCCATTGCAGGAATCCATTCAATGACGGATGAACACTTTGGCATAAGTGTAGTGGAGTATATGGCTGCAGGAGCCATCCCAATTGCACATAACTCTGCCGGCCCGAAAATGGACATTGTTTTACAGGAAGATGGATGGCAAACGGGATTTCTTGCCTGTACTGTGGACGAGTATGCAGATGCCATTCTCAATGTCATAAAGATGCCAGAAATTAAGAGGCTGAAGATGGCTGCAGCTGCGAGAAAACGGGCTGGCAGATATTCGGAGCAAAGATTCTATGAAGATTTCAAAGCTGCAATCTCTCCAGTACTCGCTTAA

Protein Analysis

437

Amino Acids

49.05

Weight (kDa)

9.01

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALG11_N PF15924 34 - 239 3.3e-88 ALG11 mannosyltransferase N-terminus
Glyco_trans_1_4 PF13692 267 - 397 2.8e-10 Glycosyl transferases group 1
Glycos_transf_1 PF00534 270 - 414 4.5e-19 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011501)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 209
AccI GTMKAC 4 cut(s) 213, 384, 615, 744
AccII CGCG 4 cut(s) 102, 258, 260, 349
AclI AACGTT 1 cut(s) 898
AclWI GGATC 3 cut(s) 46, 335, 661
AcsI RAATTY 1 cut(s) 944
AcuI CTGAAG 4 cut(s) 755, 833, 944, 1235
AcyI GRCGYC 1 cut(s) 276
AfaI GTAC 6 cut(s) 458, 560, 894, 965, 1153, 1302
AfiI CCNNNNNNNGG 5 cut(s) 298, 348, 394, 793, 1102
AgsI TTSAA 5 cut(s) 904, 920, 980, 1014, 1282
AjnI CCWGG 2 cut(s) 180, 836
AluBI AGCT 8 cut(s) 519, 603, 712, 847, 864, 878, 1229, 1286
AluI AGCT 8 cut(s) 519, 603, 712, 847, 864, 878, 1229, 1286
Alw21I GWGCWC 1 cut(s) 664
Alw26I GTCTC 1 cut(s) 788
AlwI GGATC 3 cut(s) 46, 335, 661
Ama87I CYCGRG 1 cut(s) 534
AoxI GGCC 5 cut(s) 45, 336, 795, 839, 1093
ApeKI GCWGC 7 cut(s) 519, 603, 1058, 1223, 1226, 1229, 1286
ApoI RAATTY 1 cut(s) 944
Asp700I GAANNNNTTC 1 cut(s) 1009
AspLEI GCGC 3 cut(s) 104, 167, 260
AspS9I GGNCC 3 cut(s) 46, 538, 1094
AsuC2I CCSGG 3 cut(s) 469, 535, 536
AvaI CYCGRG 1 cut(s) 534
AvaII GGWCC 1 cut(s) 538
Bbv12I GWGCWC 1 cut(s) 664
BbvI GCAGC 7 cut(s) 506, 590, 1045, 1210, 1216, 1238, 1273
BccI CCATC 5 cut(s) 185, 1076, 1118, 1122, 1213
BceAI ACGGC 3 cut(s) 89, 151, 152
BcgI CGANNNNNNTGC 2 cut(s) 560, 594
BciT130I CCWGG 2 cut(s) 182, 838
BclI TGATCA 1 cut(s) 30
BcnI CCSGG 3 cut(s) 469, 535, 536
BcoDI GTCTC 1 cut(s) 788
BfmI CTRYAG 2 cut(s) 1059, 1224
BmcAI AGTACT 1 cut(s) 1302
Bme1390I CCNGG 5 cut(s) 182, 469, 535, 536, 838
Bme18I GGWCC 1 cut(s) 538
BmeT110I CYCGRG 1 cut(s) 534
BmgT120I GGNCC 3 cut(s) 46, 538, 1094
BmiI GGNNCC 3 cut(s) 539, 994, 1066
BmrFI CCNGG 5 cut(s) 182, 469, 535, 536, 838
BmsI GCATC 3 cut(s) 814, 1162, 1185
BpmI CTGGAG 2 cut(s) 736, 1281
Bpu10I CCTNAGC 1 cut(s) 843
BpuEI CTTGAG 1 cut(s) 812
BpuMI CCSGG 3 cut(s) 469, 535, 536
BsaAI YACGTR 1 cut(s) 456
BsaHI GRCGYC 1 cut(s) 276
BsaI GGTCTC 1 cut(s) 788
BsaJI CCNNGG 6 cut(s) 297, 347, 373, 534, 672, 836
BsaXI ACNNNNNCTCC 4 cut(s) 515, 545, 768, 798
Bsc4I CCNNNNNNNGG 5 cut(s) 298, 348, 394, 793, 1102
Bse118I RCCGGY 3 cut(s) 80, 218, 1091
Bse1I ACTGG 1 cut(s) 1298
Bse3DI GCAATG 2 cut(s) 576, 996
BseBI CCWGG 2 cut(s) 182, 838
BseDI CCNNGG 6 cut(s) 297, 347, 373, 534, 672, 836
BseGI GGATG 6 cut(s) 177, 642, 943, 1027, 1068, 1133
BseLI CCNNNNNNNGG 5 cut(s) 298, 348, 394, 793, 1102
BseMI GCAATG 2 cut(s) 576, 996
BseMII CTCAG 2 cut(s) 47, 707
BseNI ACTGG 1 cut(s) 1298
BseRI GAGGAG 3 cut(s) 275, 347, 1005
BseXI GCAGC 7 cut(s) 506, 590, 1045, 1210, 1216, 1238, 1273
Bsh1236I CGCG 4 cut(s) 102, 258, 260, 349
BshFI GGCC 5 cut(s) 47, 338, 797, 841, 1095
BsiHKAI GWGCWC 1 cut(s) 664
BsiHKCI CYCGRG 1 cut(s) 534
BsiSI CCGG 6 cut(s) 81, 219, 469, 535, 634, 1092
BslFI GGGAC 2 cut(s) 682, 983
BslI CCNNNNNNNGG 5 cut(s) 298, 348, 394, 793, 1102
BsmAI GTCTC 1 cut(s) 788
BsmFI GGGAC 2 cut(s) 682, 983
BsmI GAATGC 1 cut(s) 720
BsnI GGCC 5 cut(s) 47, 338, 797, 841, 1095
Bso31I GGTCTC 1 cut(s) 788
BsoBI CYCGRG 1 cut(s) 534
Bsp1286I GDGCHC 1 cut(s) 664
Bsp1407I TGTACA 2 cut(s) 558, 963
Bsp143I GATC 4 cut(s) 30, 51, 327, 653
Bsp19I CCATGG 1 cut(s) 672
BspANI GGCC 5 cut(s) 47, 338, 797, 841, 1095
BspCNI CTCAG 2 cut(s) 48, 706
BspFNI CGCG 4 cut(s) 102, 258, 260, 349
BspLI GGNNCC 3 cut(s) 539, 994, 1066
BspMAI CTGCAG 2 cut(s) 1063, 1228
BspPI GGATC 3 cut(s) 46, 335, 661
BspTNI GGTCTC 1 cut(s) 788
BsrDI GCAATG 2 cut(s) 576, 996
BsrFI RCCGGY 3 cut(s) 80, 218, 1091
BsrGI TGTACA 2 cut(s) 558, 963
BsrI ACTGG 1 cut(s) 1298
BssAI RCCGGY 3 cut(s) 80, 218, 1091
BssECI CCNNGG 6 cut(s) 297, 347, 373, 534, 672, 836
BssMI GATC 4 cut(s) 30, 51, 327, 653
BssNAI GTATAC 1 cut(s) 616
BssNI GRCGYC 1 cut(s) 276
BssT1I CCWWGG 2 cut(s) 297, 672
Bst1107I GTATAC 1 cut(s) 616
Bst2UI CCWGG 2 cut(s) 182, 838
Bst4CI ACNGT 1 cut(s) 1156
BstACI GRCGYC 1 cut(s) 276
BstAUI TGTACA 2 cut(s) 558, 963
BstBAI YACGTR 1 cut(s) 456
BstC8I GCNNGC 5 cut(s) 256, 442, 545, 1093, 1246
BstDEI CTNAG 4 cut(s) 56, 693, 735, 843
BstDSI CCRYGG 2 cut(s) 347, 672
BstF5I GGATG 6 cut(s) 177, 642, 943, 1027, 1068, 1133
BstFNI CGCG 4 cut(s) 102, 258, 260, 349
BstHHI GCGC 3 cut(s) 104, 167, 260
BstKTI GATC 4 cut(s) 33, 54, 330, 656
BstMAI GTCTC 1 cut(s) 788
BstMBI GATC 4 cut(s) 30, 51, 327, 653
BstMWI GCNNNNNNNGC 6 cut(s) 44, 173, 446, 668, 1064, 1229
BstNI CCWGG 2 cut(s) 182, 838
BstNSI RCATGY 1 cut(s) 529
BstSCI CCNGG 5 cut(s) 180, 467, 533, 534, 836
BstSFI CTRYAG 2 cut(s) 1059, 1224
BstUI CGCG 4 cut(s) 102, 258, 260, 349
BstV1I GCAGC 7 cut(s) 506, 590, 1045, 1210, 1216, 1238, 1273
BstX2I RGATCY 1 cut(s) 653
BstYI RGATCY 1 cut(s) 653
BstZ17I GTATAC 1 cut(s) 616
BsuRI GGCC 5 cut(s) 47, 338, 797, 841, 1095
BtgI CCRYGG 2 cut(s) 347, 672
BtsCI GGATG 6 cut(s) 177, 642, 943, 1027, 1068, 1133
BtsI GCAGTG 1 cut(s) 33
BtsIMutI CAGTG 1 cut(s) 33
Cac8I GCNNGC 5 cut(s) 256, 442, 545, 1093, 1246
CfoI GCGC 3 cut(s) 104, 167, 260
Cfr10I RCCGGY 3 cut(s) 80, 218, 1091
Cfr13I GGNCC 3 cut(s) 46, 538, 1094
Cfr42I CCGCGG 1 cut(s) 350
Cfr9I CCCGGG 1 cut(s) 534
CseI GACGC 2 cut(s) 239, 265
Csp6I GTAC 6 cut(s) 457, 559, 893, 964, 1152, 1301
CviAII CATG 7 cut(s) 393, 526, 556, 673, 687, 779, 961
CviQI GTAC 6 cut(s) 457, 559, 893, 964, 1152, 1301
DdeI CTNAG 4 cut(s) 56, 693, 735, 843
DpnI GATC 4 cut(s) 32, 53, 329, 655
DpnII GATC 4 cut(s) 30, 51, 327, 653
DrdI GACNNNNNNGTC 1 cut(s) 209
DseDI GACNNNNNNGTC 1 cut(s) 209
EciI GGCGGA 2 cut(s) 278, 530
Eco130I CCWWGG 2 cut(s) 297, 672
Eco147I AGGCCT 2 cut(s) 797, 841
Eco31I GGTCTC 1 cut(s) 788
Eco47I GGWCC 1 cut(s) 538
Eco57I CTGAAG 4 cut(s) 755, 833, 944, 1235
Eco88I CYCGRG 1 cut(s) 534
EcoRII CCWGG 2 cut(s) 180, 836
EcoT14I CCWWGG 2 cut(s) 297, 672
ErhI CCWWGG 2 cut(s) 297, 672
FaeI CATG 7 cut(s) 396, 529, 559, 676, 690, 782, 964
FaqI GGGAC 2 cut(s) 682, 983
FatI CATG 7 cut(s) 392, 525, 555, 672, 686, 778, 960
FauI CCCGC 4 cut(s) 137, 263, 354, 732
FbaI TGATCA 1 cut(s) 30
FblI GTMKAC 4 cut(s) 213, 384, 615, 744
FokI GGATG 6 cut(s) 164, 649, 950, 1034, 1055, 1140
GlaI GCGC 3 cut(s) 103, 166, 259
GsuI CTGGAG 2 cut(s) 736, 1281
HaeIII GGCC 5 cut(s) 47, 338, 797, 841, 1095
HapII CCGG 6 cut(s) 81, 219, 469, 535, 634, 1092
HgaI GACGC 2 cut(s) 239, 265
HhaI GCGC 3 cut(s) 104, 167, 260
Hin1I GRCGYC 1 cut(s) 276
Hin1II CATG 7 cut(s) 396, 529, 559, 676, 690, 782, 964
Hin6I GCGC 3 cut(s) 102, 165, 258
HinP1I GCGC 3 cut(s) 102, 165, 258
HincII GTYRAC 3 cut(s) 265, 280, 405
HindII GTYRAC 3 cut(s) 265, 280, 405
HindIII AAGCTT 1 cut(s) 845
HinfI GANTC 5 cut(s) 60, 153, 691, 1005, 1266
HpaII CCGG 6 cut(s) 81, 219, 469, 535, 634, 1092
Hpy166II GTNNAC 9 cut(s) 214, 265, 280, 385, 405, 414, 616, 745, 1159
Hpy188I TCNGA 4 cut(s) 30, 585, 870, 1258
Hpy188III TCNNGA 4 cut(s) 16, 55, 715, 765
Hpy8I GTNNAC 9 cut(s) 214, 265, 280, 385, 405, 414, 616, 745, 1159
Hpy99I CGWCG 2 cut(s) 110, 233
HpyAV CCTTC 3 cut(s) 121, 460, 898
HpyCH4III ACNGT 1 cut(s) 1156
HpyCH4IV ACGT 2 cut(s) 455, 898
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 173, 446, 668, 1064, 1229
HpyF3I CTNAG 4 cut(s) 56, 693, 735, 843
HpySE526I ACGT 2 cut(s) 455, 898
Hsp92I GRCGYC 1 cut(s) 276
Hsp92II CATG 7 cut(s) 396, 529, 559, 676, 690, 782, 964
HspAI GCGC 3 cut(s) 102, 165, 258
KroI GCCGGC 1 cut(s) 1091
KroNI GCCGGC 1 cut(s) 1093
Ksp22I TGATCA 1 cut(s) 30
KspI CCGCGG 1 cut(s) 350
Kzo9I GATC 4 cut(s) 30, 51, 327, 653
LmnI GCTCC 5 cut(s) 585, 717, 992, 1064, 1258
Lsp1109I GCAGC 7 cut(s) 506, 590, 1045, 1210, 1216, 1238, 1273
LweI GCATC 3 cut(s) 814, 1162, 1185
MaeII ACGT 2 cut(s) 455, 898
MalI GATC 4 cut(s) 32, 53, 329, 655
MboI GATC 4 cut(s) 30, 51, 327, 653
MboII GAAGA 4 cut(s) 106, 1133, 1228, 1286
MfeI CAATTG 4 cut(s) 462, 589, 915, 1074
MflI RGATCY 1 cut(s) 653
MhlI GDGCHC 1 cut(s) 664
MlyI GAGTC 2 cut(s) 162, 685
MmeI TCCRAC 4 cut(s) 443, 811, 848, 909
MroNI GCCGGC 1 cut(s) 1091
MroXI GAANNNNTTC 1 cut(s) 1009
MseI TTAA 3 cut(s) 678, 1206, 1309
MslI CAYNNNNRTG 2 cut(s) 954, 1193
MspA1I CMGCKG 5 cut(s) 349, 440, 519, 603, 1229
MspI CCGG 6 cut(s) 81, 219, 469, 535, 634, 1092
MspR9I CCNGG 5 cut(s) 182, 469, 535, 536, 838
MunI CAATTG 4 cut(s) 462, 589, 915, 1074
Mva1269I GAATGC 1 cut(s) 720
MvaI CCWGG 2 cut(s) 182, 838
MvnI CGCG 4 cut(s) 102, 258, 260, 349
MwoI GCNNNNNNNGC 6 cut(s) 44, 173, 446, 668, 1064, 1229
NaeI GCCGGC 1 cut(s) 1093
NciI CCSGG 3 cut(s) 469, 535, 536
NcoI CCATGG 1 cut(s) 672
NdeII GATC 4 cut(s) 30, 51, 327, 653
NgoMIV GCCGGC 1 cut(s) 1091
NlaIII CATG 7 cut(s) 396, 529, 559, 676, 690, 782, 964
NlaIV GGNNCC 3 cut(s) 539, 994, 1066
NmeAIII GCCGAG 2 cut(s) 23, 354
NspI RCATGY 1 cut(s) 529
PceI AGGCCT 2 cut(s) 797, 841
PctI GAATGC 1 cut(s) 720
PdiI GCCGGC 1 cut(s) 1093
PdmI GAANNNNTTC 1 cut(s) 1009
PfeI GAWTC 3 cut(s) 60, 1005, 1266
PflFI GACNNNGTC 1 cut(s) 694
PfoI TCCNGGA 1 cut(s) 180
PleI GAGTC 2 cut(s) 161, 685
PpsI GAGTC 2 cut(s) 161, 685
Ppu21I YACGTR 1 cut(s) 456
Psp1406I AACGTT 1 cut(s) 898
Psp6I CCWGG 2 cut(s) 180, 836
PspGI CCWGG 2 cut(s) 180, 836
PspN4I GGNNCC 3 cut(s) 539, 994, 1066
PspPI GGNCC 3 cut(s) 46, 538, 1094
PstI CTGCAG 2 cut(s) 1063, 1228
PsuI RGATCY 1 cut(s) 653
PsyI GACNNNGTC 1 cut(s) 694
PvuII CAGCTG 3 cut(s) 519, 603, 1229
RsaI GTAC 6 cut(s) 458, 560, 894, 965, 1153, 1302
RsaNI GTAC 6 cut(s) 457, 559, 893, 964, 1152, 1301
RseI CAYNNNNRTG 2 cut(s) 954, 1193
SacII CCGCGG 1 cut(s) 350
SaqAI TTAA 3 cut(s) 678, 1206, 1309
Sau3AI GATC 4 cut(s) 30, 51, 327, 653
Sau96I GGNCC 3 cut(s) 46, 538, 1094
ScaI AGTACT 1 cut(s) 1302
SchI GAGTC 2 cut(s) 162, 685
ScrFI CCNGG 5 cut(s) 182, 469, 535, 536, 838
SduI GDGCHC 1 cut(s) 664
SfaNI GCATC 3 cut(s) 814, 1162, 1185
SfcI CTRYAG 2 cut(s) 1059, 1224
Sfr303I CCGCGG 1 cut(s) 350
SgrAI CRCCGGYG 1 cut(s) 218
SgrBI CCGCGG 1 cut(s) 350
SinI GGWCC 1 cut(s) 538
SmaI CCCGGG 1 cut(s) 536
SmiMI CAYNNNNRTG 2 cut(s) 954, 1193
SmlI CTYRAG 1 cut(s) 791
SmoI CTYRAG 1 cut(s) 791
SseBI AGGCCT 2 cut(s) 797, 841
StuI AGGCCT 2 cut(s) 797, 841
StyD4I CCNGG 5 cut(s) 180, 467, 533, 534, 836
StyI CCWWGG 2 cut(s) 297, 672
TaaI ACNGT 1 cut(s) 1156
TaiI ACGT 2 cut(s) 458, 901
TaqI TCGA 3 cut(s) 330, 432, 705
TatI WGTACW 5 cut(s) 558, 892, 963, 1151, 1300
TauI GCSGC 3 cut(s) 141, 144, 352
TfiI GAWTC 3 cut(s) 60, 1005, 1266
Tru1I TTAA 3 cut(s) 678, 1206, 1309
Tru9I TTAA 3 cut(s) 678, 1206, 1309
TscAI CASTG 1 cut(s) 40
TseI GCWGC 7 cut(s) 519, 603, 1058, 1223, 1226, 1229, 1286
TspDTI ATGAA 4 cut(s) 565, 938, 1038, 1287
TspGWI ACGGA 2 cut(s) 745, 1034
TspMI CCCGGG 1 cut(s) 534
TspRI CASTG 1 cut(s) 40
Tth111I GACNNNGTC 1 cut(s) 694
VpaK11BI GGWCC 1 cut(s) 538
XapI RAATTY 1 cut(s) 944
XceI RCATGY 1 cut(s) 529
XmaI CCCGGG 1 cut(s) 534
XmiI GTMKAC 4 cut(s) 213, 384, 615, 744
XmnI GAANNNNTTC 1 cut(s) 1009
ZrmI AGTACT 1 cut(s) 1302
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.