MD01G1154800.v1.1
NAC Family

GDP-Man Man(3)GlcNAc(2)-PP-Dol

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
Physical Location & Seq
Forward (+)
26305594 .. 26308493
2900 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1154800.v1.1.491

Sequence Viewer

Length: 1398 bp
ATGCAAATGGCGTACCATCTCGTGATTTGGGGTCTGATCACTGCTCTCTCGGCCCTGATCCTGAGAATCTCCCTCCAAATATCCGCCGCCAGAAGCAACAGAAAACGCGCCGTCGCCTTCTTCCACCCCTACACCAACGACGGCGGCGGCGGAGAAAGAGTCCTCTGGTGCGCCGTTAAAGCCATCCAGGACGAAAACCCCTCCCTCGACTGCCTCGTCTACACCGGCGACCACGACGCCTCTCCTCACTCCTTGACCGCCCGTGCCGTCGACCGCTTCGGCGTCAAACTCGTTCACCAACCCAAGGTGGTGCATTTGAGCAAGAGGAAATGGGTCGAGGAGGCCACCTACCCCCGGCTGACCATGATCGGGCAGAGCCTCGGTTCTGTCTACCTCTCATGGGAGGCGTTGACGAAGTTCACTCCTACTTTTTACTTCGACACCGCTGGCTATGCCTTCACGTACCCAATGGCCCGGCTGTTTGGTTGCAGGGTTATCTGCTACACCCATTACCCCACAATCAGCTGCGACATGCTCTCCCGGGTCCGCCGGCGGAGCTCCATGTACAACAACGACGACTTCATTGCTCGGAGCAATTGGTTGTCCAGCTGCAAAGTCGTATACTACAATATATTTAGCCGGATGTATGGGATTGTGGGCTCTTGTGCTCATCTTGTTATGGTTAATTCGTCCTGGACTCAGTCCCATATCGAAAAGCTCTGGAACATTCCCACACGGACTAAGCGGGTCTACCCTCCTTGTGACACTTCTGGACTTCAGGCACTTCCGTTGGAAAGGCCAGCTGAACCGGCAAAATTTATATCTGTTGCTCAGTTTCGGCCAGAGAAGGCACATGGGCTCCAACTTGAGGCGTTCGCAGTTGCCATAGGAAAATTAGATGCACACTTGCCCAGACCTAAGCTTCAGTTTGTGGGTAGCTGTCGGAATAAGGCAGATGAGGAAAGATTGCAACATTTGAAAGATAAAGCAGTTGAACTGAAGGTTGACGGGGACGTTGAATTTCATAAAAATGTATTATACAGGGACTTGGTGCAACTTCTGGGAGGGGCCATCGCAGGAATCCATTCAATGACGGATGAACACTTTGGAATAAGTGTTGTGGAGTATATGGCTGCAGGAGCCATCCCAATTGCACATAACTCTGCTGGCCCGAAAATGGACATTGTTTTAGCAGAGGATGGATTGCAAACAGGATTTCTTGCCCGCACAGTGGACGAATATGCAGTCGCCATCCTCAATGTCATAAAGATGCCAGAAAGCGAGAGGCTGAAGATGGCTTCAGCTGCGAGGAAGCGGGGTGGCAGATACTCGGAGCAAAGATTCTATGAAGATTTCAAAGCTGCAATCTCCCCAGTGCTCACCCATTCTTCTAGTTAA

Protein Analysis

466

Amino Acids

52.13

Weight (kDa)

9.1

Isoelectric Point (pI)

50.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ALG11_N PF15924 36 - 241 3.2e-89 ALG11 mannosyltransferase N-terminus
Glycos_transf_1 PF00534 266 - 439 1e-20 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 273 - 422 9.4e-11 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011501)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 215
AccI GTMKAC 5 cut(s) 219, 270, 390, 621, 750
AccII CGCG 1 cut(s) 108
AclWI GGATC 1 cut(s) 52
AcoI YGGCCR 1 cut(s) 839
AcsI RAATTY 2 cut(s) 815, 1019
AcuI CTGAAG 5 cut(s) 761, 908, 1019, 1284, 1310
AcyI GRCGYC 2 cut(s) 237, 282
AfaI GTAC 3 cut(s) 14, 464, 566
AfiI CCNNNNNNNGG 7 cut(s) 304, 354, 369, 400, 868, 1177, 1231
AgsI TTSAA 5 cut(s) 979, 995, 1019, 1089, 1357
AjnI CCWGG 2 cut(s) 186, 692
AluBI AGCT 9 cut(s) 525, 558, 609, 718, 803, 922, 939, 1304, 1361
AluI AGCT 9 cut(s) 525, 558, 609, 718, 803, 922, 939, 1304, 1361
Alw21I GWGCWC 3 cut(s) 560, 670, 1380
AlwI GGATC 1 cut(s) 52
Ama87I CYCGRG 1 cut(s) 540
AoxI GGCC 7 cut(s) 51, 342, 471, 797, 839, 1068, 1168
ApeKI GCWGC 5 cut(s) 525, 609, 1133, 1304, 1361
ApoI RAATTY 2 cut(s) 815, 1019
ArsI GACNNNNNNTTYG 2 cut(s) 1230, 1262
Asp700I GAANNNNTTC 1 cut(s) 1084
AspLEI GCGC 2 cut(s) 110, 173
AspS9I GGNCC 5 cut(s) 52, 472, 544, 1068, 1169
AsuC2I CCSGG 4 cut(s) 355, 475, 541, 542
AsuHPI GGTGA 2 cut(s) 287, 1372
AvaI CYCGRG 1 cut(s) 540
AvaII GGWCC 1 cut(s) 544
BanII GRGCYC 3 cut(s) 560, 662, 861
BauI CACGAG 1 cut(s) 20
Bbv12I GWGCWC 3 cut(s) 560, 670, 1380
BbvI GCAGC 5 cut(s) 512, 596, 1120, 1291, 1348
BccI CCATC 7 cut(s) 24, 191, 1079, 1151, 1193, 1259, 1288
BceAI ACGGC 4 cut(s) 95, 157, 158, 251
BcgI CGANNNNNNTGC 2 cut(s) 566, 600
BciT130I CCWGG 2 cut(s) 188, 694
BclI TGATCA 1 cut(s) 36
BcnI CCSGG 4 cut(s) 355, 475, 541, 542
BfaI CTAG 1 cut(s) 1392
BfmI CTRYAG 1 cut(s) 1134
BisI GCNGC 8 cut(s) 87, 145, 148, 526, 610, 1134, 1305, 1362
BlsI GCNGC 8 cut(s) 88, 146, 149, 527, 611, 1135, 1306, 1363
Bme1390I CCNGG 6 cut(s) 188, 355, 475, 541, 542, 694
Bme18I GGWCC 1 cut(s) 544
BmeT110I CYCGRG 1 cut(s) 540
BmgT120I GGNCC 5 cut(s) 52, 472, 544, 1068, 1169
BmiI GGNNCC 4 cut(s) 545, 860, 1069, 1141
BmrFI CCNGG 6 cut(s) 188, 355, 475, 541, 542, 694
BmrI ACTGGG 1 cut(s) 1367
BmsI GCATC 2 cut(s) 889, 1260
BmuI ACTGGG 1 cut(s) 1367
Bpu10I CCTNAGC 1 cut(s) 918
BpuEI CTTGAG 1 cut(s) 887
BpuMI CCSGG 4 cut(s) 355, 475, 541, 542
BsaAI YACGTR 1 cut(s) 462
BsaHI GRCGYC 2 cut(s) 237, 282
BsaJI CCNNGG 4 cut(s) 303, 353, 379, 540
BsaXI ACNNNNNCTCC 6 cut(s) 144, 174, 521, 551, 843, 873
Bsc4I CCNNNNNNNGG 7 cut(s) 304, 354, 369, 400, 868, 1177, 1231
Bse118I RCCGGY 3 cut(s) 224, 549, 808
Bse1I ACTGG 1 cut(s) 1373
Bse3DI GCAATG 1 cut(s) 582
BseBI CCWGG 2 cut(s) 188, 694
BseDI CCNNGG 4 cut(s) 303, 353, 379, 540
BseGI GGATG 6 cut(s) 183, 648, 1102, 1143, 1204, 1251
BseLI CCNNNNNNNGG 7 cut(s) 304, 354, 369, 400, 868, 1177, 1231
BseMI GCAATG 1 cut(s) 582
BseMII CTCAG 3 cut(s) 53, 713, 845
BseNI ACTGG 1 cut(s) 1373
BseRI GAGGAG 2 cut(s) 234, 353
BseXI GCAGC 5 cut(s) 512, 596, 1120, 1291, 1348
Bsh1236I CGCG 1 cut(s) 108
Bsh1285I CGRYCG 1 cut(s) 274
BshFI GGCC 7 cut(s) 53, 344, 473, 799, 841, 1070, 1170
BsiEI CGRYCG 1 cut(s) 274
BsiHKAI GWGCWC 3 cut(s) 560, 670, 1380
BsiHKCI CYCGRG 1 cut(s) 540
BsiSI CCGG 7 cut(s) 225, 355, 475, 541, 550, 640, 809
BslFI GGGAC 3 cut(s) 688, 1025, 1058
BslI CCNNNNNNNGG 7 cut(s) 304, 354, 369, 400, 868, 1177, 1231
BsmFI GGGAC 3 cut(s) 688, 1025, 1058
BsnI GGCC 7 cut(s) 53, 344, 473, 799, 841, 1070, 1170
BsoBI CYCGRG 1 cut(s) 540
Bsp1286I GDGCHC 5 cut(s) 560, 662, 670, 861, 1380
Bsp1407I TGTACA 1 cut(s) 564
Bsp143I GATC 3 cut(s) 36, 57, 366
BspANI GGCC 7 cut(s) 53, 344, 473, 799, 841, 1070, 1170
BspCNI CTCAG 3 cut(s) 54, 712, 844
BspFNI CGCG 1 cut(s) 108
BspLI GGNNCC 4 cut(s) 545, 860, 1069, 1141
BspMAI CTGCAG 1 cut(s) 1138
BspPI GGATC 1 cut(s) 52
BsrDI GCAATG 1 cut(s) 582
BsrFI RCCGGY 3 cut(s) 224, 549, 808
BsrGI TGTACA 1 cut(s) 564
BsrI ACTGG 1 cut(s) 1373
BssAI RCCGGY 3 cut(s) 224, 549, 808
BssECI CCNNGG 4 cut(s) 303, 353, 379, 540
BssMI GATC 3 cut(s) 36, 57, 366
BssNAI GTATAC 1 cut(s) 622
BssNI GRCGYC 2 cut(s) 237, 282
BssSI CACGAG 1 cut(s) 20
BssT1I CCWWGG 1 cut(s) 303
Bst1107I GTATAC 1 cut(s) 622
Bst2BI CACGAG 1 cut(s) 20
Bst2UI CCWGG 2 cut(s) 188, 694
Bst4CI ACNGT 1 cut(s) 1231
BstACI GRCGYC 2 cut(s) 237, 282
BstAUI TGTACA 1 cut(s) 564
BstBAI YACGTR 1 cut(s) 462
BstC8I GCNNGC 5 cut(s) 448, 551, 801, 1168, 1225
BstDEI CTNAG 5 cut(s) 62, 699, 741, 831, 918
BstF5I GGATG 6 cut(s) 183, 648, 1102, 1143, 1204, 1251
BstFNI CGCG 1 cut(s) 108
BstHHI GCGC 2 cut(s) 110, 173
BstKTI GATC 3 cut(s) 39, 60, 369
BstMBI GATC 3 cut(s) 36, 57, 366
BstMCI CGRYCG 1 cut(s) 274
BstMWI GCNNNNNNNGC 7 cut(s) 50, 179, 452, 555, 809, 1139, 1304
BstNI CCWGG 2 cut(s) 188, 694
BstNSI RCATGY 1 cut(s) 535
BstSCI CCNGG 6 cut(s) 186, 353, 473, 539, 540, 692
BstSFI CTRYAG 1 cut(s) 1134
BstUI CGCG 1 cut(s) 108
BstV1I GCAGC 5 cut(s) 512, 596, 1120, 1291, 1348
BstZ17I GTATAC 1 cut(s) 622
BsuRI GGCC 7 cut(s) 53, 344, 473, 799, 841, 1070, 1170
BtgZI GCGATG 1 cut(s) 1057
BtsCI GGATG 6 cut(s) 183, 648, 1102, 1143, 1204, 1251
BtsI GCAGTG 1 cut(s) 39
BtsIMutI CAGTG 3 cut(s) 39, 1236, 1380
Cac8I GCNNGC 5 cut(s) 448, 551, 801, 1168, 1225
CfoI GCGC 2 cut(s) 110, 173
Cfr10I RCCGGY 3 cut(s) 224, 549, 808
Cfr13I GGNCC 5 cut(s) 52, 472, 544, 1068, 1169
Cfr9I CCCGGG 1 cut(s) 540
CseI GACGC 2 cut(s) 245, 271
Csp6I GTAC 3 cut(s) 13, 463, 565
CviAII CATG 5 cut(s) 364, 399, 532, 562, 854
CviQI GTAC 3 cut(s) 13, 463, 565
DdeI CTNAG 5 cut(s) 62, 699, 741, 831, 918
DpnI GATC 3 cut(s) 38, 59, 368
DpnII GATC 3 cut(s) 36, 57, 366
DrdI GACNNNNNNGTC 1 cut(s) 215
DseDI GACNNNNNNGTC 1 cut(s) 215
EaeI YGGCCR 1 cut(s) 839
EciI GGCGGA 4 cut(s) 73, 165, 536, 568
Ecl136II GAGCTC 1 cut(s) 558
Eco130I CCWWGG 1 cut(s) 303
Eco24I GRGCYC 3 cut(s) 560, 662, 861
Eco47I GGWCC 1 cut(s) 544
Eco53kI GAGCTC 1 cut(s) 558
Eco57I CTGAAG 5 cut(s) 761, 908, 1019, 1284, 1310
Eco88I CYCGRG 1 cut(s) 540
EcoICRI GAGCTC 1 cut(s) 558
EcoRII CCWGG 2 cut(s) 186, 692
EcoT14I CCWWGG 1 cut(s) 303
EcoT38I GRGCYC 3 cut(s) 560, 662, 861
ErhI CCWWGG 1 cut(s) 303
FaeI CATG 5 cut(s) 367, 402, 535, 565, 857
FaqI GGGAC 3 cut(s) 688, 1025, 1058
FatI CATG 5 cut(s) 363, 398, 531, 561, 853
FauI CCCGC 3 cut(s) 738, 1232, 1308
FbaI TGATCA 1 cut(s) 36
FblI GTMKAC 5 cut(s) 219, 270, 390, 621, 750
Fnu4HI GCNGC 8 cut(s) 87, 145, 148, 526, 610, 1134, 1305, 1362
FokI GGATG 6 cut(s) 170, 655, 1109, 1130, 1211, 1238
FriOI GRGCYC 3 cut(s) 560, 662, 861
Fsp4HI GCNGC 8 cut(s) 87, 145, 148, 526, 610, 1134, 1305, 1362
FspBI CTAG 1 cut(s) 1392
GlaI GCGC 2 cut(s) 109, 172
GluI GCNGC 8 cut(s) 87, 145, 148, 526, 610, 1134, 1305, 1362
HaeIII GGCC 7 cut(s) 53, 344, 473, 799, 841, 1070, 1170
HapII CCGG 7 cut(s) 225, 355, 475, 541, 550, 640, 809
HgaI GACGC 2 cut(s) 245, 271
HhaI GCGC 2 cut(s) 110, 173
Hin1I GRCGYC 2 cut(s) 237, 282
Hin1II CATG 5 cut(s) 367, 402, 535, 565, 857
Hin6I GCGC 2 cut(s) 108, 171
HinP1I GCGC 2 cut(s) 108, 171
HincII GTYRAC 3 cut(s) 271, 411, 1006
HindII GTYRAC 3 cut(s) 271, 411, 1006
HindIII AAGCTT 1 cut(s) 920
HinfI GANTC 5 cut(s) 66, 159, 697, 1080, 1341
HpaII CCGG 7 cut(s) 225, 355, 475, 541, 550, 640, 809
HphI GGTGA 2 cut(s) 287, 1372
Hpy188I TCNGA 4 cut(s) 36, 591, 945, 1333
Hpy188III TCNNGA 4 cut(s) 22, 61, 721, 771
Hpy99I CGWCG 5 cut(s) 116, 143, 239, 272, 578
HpyAV CCTTC 4 cut(s) 127, 466, 841, 994
HpyCH4III ACNGT 1 cut(s) 1231
HpyCH4IV ACGT 2 cut(s) 461, 1014
HpyF10VI GCNNNNNNNGC 7 cut(s) 50, 179, 452, 555, 809, 1139, 1304
HpyF3I CTNAG 5 cut(s) 62, 699, 741, 831, 918
HpySE526I ACGT 2 cut(s) 461, 1014
Hsp92I GRCGYC 2 cut(s) 237, 282
Hsp92II CATG 5 cut(s) 367, 402, 535, 565, 857
HspAI GCGC 2 cut(s) 108, 171
KroI GCCGGC 1 cut(s) 549
KroNI GCCGGC 1 cut(s) 551
Ksp22I TGATCA 1 cut(s) 36
Kzo9I GATC 3 cut(s) 36, 57, 366
LmnI GCTCC 6 cut(s) 555, 563, 591, 864, 1139, 1333
Lsp1109I GCAGC 5 cut(s) 512, 596, 1120, 1291, 1348
LweI GCATC 2 cut(s) 889, 1260
MaeI CTAG 1 cut(s) 1392
MaeII ACGT 2 cut(s) 461, 1014
MaeIII GTNAC 1 cut(s) 761
MalI GATC 3 cut(s) 38, 59, 368
MboI GATC 3 cut(s) 36, 57, 366
MboII GAAGA 4 cut(s) 112, 1303, 1361, 1380
MfeI CAATTG 2 cut(s) 595, 1149
MhlI GDGCHC 5 cut(s) 560, 662, 670, 861, 1380
MluCI AATT 6 cut(s) 595, 685, 815, 893, 1019, 1149
MlyI GAGTC 2 cut(s) 168, 691
MmeI TCCRAC 3 cut(s) 771, 886, 923
MreI CGCCGGCG 1 cut(s) 549
MroNI GCCGGC 1 cut(s) 549
MroXI GAANNNNTTC 1 cut(s) 1084
MseI TTAA 3 cut(s) 177, 684, 1396
MslI CAYNNNNRTG 2 cut(s) 1029, 1268
MspA1I CMGCKG 5 cut(s) 446, 525, 609, 803, 1304
MspI CCGG 7 cut(s) 225, 355, 475, 541, 550, 640, 809
MspR9I CCNGG 6 cut(s) 188, 355, 475, 541, 542, 694
MunI CAATTG 2 cut(s) 595, 1149
MvaI CCWGG 2 cut(s) 188, 694
MvnI CGCG 1 cut(s) 108
MwoI GCNNNNNNNGC 7 cut(s) 50, 179, 452, 555, 809, 1139, 1304
NaeI GCCGGC 1 cut(s) 551
NciI CCSGG 4 cut(s) 355, 475, 541, 542
NdeII GATC 3 cut(s) 36, 57, 366
NgoMIV GCCGGC 1 cut(s) 549
NlaIII CATG 5 cut(s) 367, 402, 535, 565, 857
NlaIV GGNNCC 4 cut(s) 545, 860, 1069, 1141
NmeAIII GCCGAG 1 cut(s) 29
NmuCI GTSAC 1 cut(s) 761
NspI RCATGY 1 cut(s) 535
PcsI WCGNNNNNNNCGW 1 cut(s) 213
PdiI GCCGGC 1 cut(s) 551
PdmI GAANNNNTTC 1 cut(s) 1084
PfeI GAWTC 3 cut(s) 66, 1080, 1341
PflFI GACNNNGTC 1 cut(s) 700
PfoI TCCNGGA 2 cut(s) 186, 692
PkrI GCNGC 8 cut(s) 88, 146, 149, 527, 611, 1135, 1306, 1363
PleI GAGTC 2 cut(s) 167, 691
PpsI GAGTC 2 cut(s) 167, 691
Ppu21I YACGTR 1 cut(s) 462
Psp124BI GAGCTC 1 cut(s) 560
Psp6I CCWGG 2 cut(s) 186, 692
PspGI CCWGG 2 cut(s) 186, 692
PspN4I GGNNCC 4 cut(s) 545, 860, 1069, 1141
PspPI GGNCC 5 cut(s) 52, 472, 544, 1068, 1169
PstI CTGCAG 1 cut(s) 1138
PsyI GACNNNGTC 1 cut(s) 700
PvuII CAGCTG 4 cut(s) 525, 609, 803, 1304
RsaI GTAC 3 cut(s) 14, 464, 566
RsaNI GTAC 3 cut(s) 13, 463, 565
RseI CAYNNNNRTG 2 cut(s) 1029, 1268
SacI GAGCTC 1 cut(s) 560
SalI GTCGAC 1 cut(s) 269
SaqAI TTAA 3 cut(s) 177, 684, 1396
SatI GCNGC 8 cut(s) 87, 145, 148, 526, 610, 1134, 1305, 1362
Sau3AI GATC 3 cut(s) 36, 57, 366
Sau96I GGNCC 5 cut(s) 52, 472, 544, 1068, 1169
SchI GAGTC 2 cut(s) 168, 691
ScrFI CCNGG 6 cut(s) 188, 355, 475, 541, 542, 694
SduI GDGCHC 5 cut(s) 560, 662, 670, 861, 1380
SfaNI GCATC 2 cut(s) 889, 1260
SfcI CTRYAG 1 cut(s) 1134
SgrAI CRCCGGYG 2 cut(s) 224, 549
SinI GGWCC 1 cut(s) 544
SmaI CCCGGG 1 cut(s) 542
SmiMI CAYNNNNRTG 2 cut(s) 1029, 1268
SmlI CTYRAG 1 cut(s) 866
SmoI CTYRAG 1 cut(s) 866
Sse9I AATT 6 cut(s) 595, 685, 815, 893, 1019, 1149
SspMI CTAG 1 cut(s) 1392
SstI GAGCTC 1 cut(s) 560
StyD4I CCNGG 6 cut(s) 186, 353, 473, 539, 540, 692
StyI CCWWGG 1 cut(s) 303
TaaI ACNGT 1 cut(s) 1231
TaiI ACGT 2 cut(s) 464, 1017
TaqI TCGA 5 cut(s) 207, 270, 336, 438, 711
TasI AATT 6 cut(s) 595, 685, 815, 893, 1019, 1149
TatI WGTACW 1 cut(s) 564
TauI GCSGC 3 cut(s) 89, 147, 150
TfiI GAWTC 3 cut(s) 66, 1080, 1341
Tru1I TTAA 3 cut(s) 177, 684, 1396
Tru9I TTAA 3 cut(s) 177, 684, 1396
TscAI CASTG 3 cut(s) 46, 1236, 1380
TseFI GTSAC 1 cut(s) 761
TseI GCWGC 5 cut(s) 525, 609, 1133, 1304, 1361
Tsp45I GTSAC 1 cut(s) 761
TspDTI ATGAA 4 cut(s) 571, 1013, 1113, 1362
TspGWI ACGGA 3 cut(s) 751, 777, 1109
TspMI CCCGGG 1 cut(s) 540
TspRI CASTG 3 cut(s) 46, 1236, 1380
Tth111I GACNNNGTC 1 cut(s) 700
VpaK11BI GGWCC 1 cut(s) 544
XapI RAATTY 2 cut(s) 815, 1019
XceI RCATGY 1 cut(s) 535
XmaI CCCGGG 1 cut(s) 540
XmiI GTMKAC 5 cut(s) 219, 270, 390, 621, 750
XmnI GAANNNNTTC 1 cut(s) 1084
XspI CTAG 1 cut(s) 1392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.