FvH4_7g33390

Microtubule organization protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
23759031 .. 23773879
14849 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33390.t4

Sequence Viewer

Length: 6036 bp
ATGTCGTCGGAGGAAGAGAAGCTGTTGAAGGAGGCGAAGAAATTGCCGTGGGATGATCGGCTTTTTCATAAGAACTGGAAGGTGCGAAATGAAGCCAACATCGACTTGGCTGCCCTGTGCGACTCCATCACCGATCCGAAGGACGCTCGCCTTCGTGAATTTGGTTCGTTTTTTAGGAAGACGCTGGCGGATGCCAATTCGCCGGTGCAGGAGAAGGCGCTTGATGCATTGATTGCTTATTTACGTGCGGCGGATGCTGATGCTGCAAGGTATGGGAAGGAGGTTTGCGATACCATTGTTGCGAAATGCCTCACTGGCAGGCCGAAGACGGTGGAGAAGGCGCAGGCTTCCTTCATGCTTTGGGTGGAATTGGAGGCTGTGGATGCTTTCTTGGATGCCATGGAGAAAGCAATAAAAAACAAAGTCGCCAAAGCTGTTGTGCCTGCAATTGATGTCATGTTTCAAGCCTTAAGTGAATTTGGCTCAAAAATTATTCCTCCGAAAAGGGTTCTTAAGATGCTTCCTGAACTATTTGACCATCAAGATCAAAATGTTCGTGCATCTTCTAAAGGACTTACTCTTGAGCTTTGCCGTTGGATTGGAAAAGACCCTGTAAAATCAATATTGTTTGAGAAAATGAGGGATACGATGAAAAAAGAATTGGAGGCTGAGCTCGTCAATGTCACTGGGACGGCCAGACCATCTCGCAAAATCAGATCCGAGCAAGACAAGGAGCCAGAAAAGGAAGTTGTATCTGAAGTCGTTGGTCCTGGTCTTTCTGAGGAATCTACAGCGGATGCTCCTCAGGAAATAGATGAATACGAGCTTGTTGATCCTGTTGATATTTTGACTCCTCTGGATAAGTCTGGATTTTGGGACGGAGTGAAAGCATCCAAATGGTCAGAGCGAAAGGAGGCTGTTGCTGAACTCACCAAGCTTGCTTCAACCAAAAGAATAGCTCCTGGTGACTTCACCGAAATATGTAGGACATTGAAGAAGCTTATAACAGATGTGAACATAGCTGTTGCAGTTGAAGCTATCCAAGCTCTCGGCAATCTTGCCAAGGGCCTAAGAACTCACTTTTCTGGCAGTTCGCGTTTTCTATTGCCAGGGTTACTTGAGAAATTGAAAGAGAAGAAGCCAACTATGAGTGAGGCGCTGAACCAGACTCTTCAAGCTATGCATACAGCTGGCTGCTTAAATCTTGTTGACATTGTTGAAGATGTTAAGACATCAGTTAAAAATAAAGTACCTCTTGTGCGATCATCAACTTTGAACTGGGTGACATTTTGTATTGAAACAAGTAACAAGGCTGTTGTTCTAAAGTTACACAAGGACTATGTTCCTATATTTATGGAGTGCCTCAATGATGGAACCCCAGAAGTGAGAGATGCAGCATTTTCAGCTTTGACAGCAGTAGCTAAGTCAGTTGGTATGAGGCCTTTGGAGAGGTCCCTGGAGAAACTTGATGATGTCAGAAGAAAGAAGCTTTCTGAAATGATTATGGGTTCCGAAGGTGGTACATCCACTGCTTCAACCTCAGTTCAAAGCTCTGGTGTTACTGCATCCTCTCTGGAGAATTCAGACGGTTCATTTGTTCGAAAGTCGGCTGCAAGCATGCTTAGTGGGAAGAGGCCTGTTCAGGCAGTTCCTGCTAAACAAAAAGGGGGATCTGGAAAATCTGGTGGCAGTAAGAAAGAAGTAACTGCACAGCCGAAAGCTTCCAAGTCAGTTGAACCACCTGAAGACGTTGAGCCAGCAGAAATGAGTCTTGAAGAAATTGAGAGCAGATTAGGTTCTCTTATACAAGCGGATACCATCTCTCAATTGAAGAGCGCTGTGTGGAAAGAACGGCTTGAAGCCATATCCTCATTCAAACAACAAGTGGAAGCTTTACAGGACATTAACCAGTCAGTTGAGTTATTAATTCGTTTACTCTGTGCTGTCCCTGGCTGGAGTGAAAAAAATGTTCAGGTTCAACAACAGGTAATTGAAGTTATTACCTACATAGCCTCCACTGCGATGAAATTTCCGAAGAAATGTGTGGTACTGTGTCTTCTGGGTATAAGTGAGCGGGTAGCAGATATCAAGACTCGGACTCATGCGATGAAGTGCCTGACTTCTTTCTCCGAAGCCATAGGTCCAGGATTTATTTTTGAAAGACTTTACAAAATCATGAAAGAGCACAAGAATCCTAAGGTTCTTAGCGAGGGAATATTGTGGATGGTTTCAGCCGTCGAAGATTTTGGTGTCTCACATTTGAAGCTTAAGGATTTGATTGATTTTTGCAAAGATACTGGACTGCAGTCCAGTGCTGCTGCTACTAGGAATTCTACTATAAAACTTTTGGGTGTTACACATAAGTTTGTTGGTCCAGATATCAAAGGATTTCTTACGGATGTCAAACCTGCACTACTTAGTGCACTGGAAGCGGAGTATGAAAAAAATCCATATGAGGGTGCTGCTGTGGTCCTGAAAAGAAATGTTCGAGCAGCAGAATCTTCATCAGTTTCTGCTGGTGGGTTGGATAGTCTTCCACGTGAAGATATTAGTGGAAAAGTCACACCTACTCTGCTGAAGAATTTGGAGAGCCCTGATTGGAAGGTTCGCTTGGAGTCAATTGATGCTGTAAATAAAATTATAGAAGAGGCTAATAAGCGCATCCAGCCAACTGGAACTGTGGAGTTATTTGGTGCCTTAAGGGGGCGATTATATGACAGCAATAAGAACCTAGTTGCAGCAACCTTGACAGCTATTGGTAATGTTGCATCTGCAATGGGAGCACTGGTTGAAAAGGCGAGCAAGGGCATTCTGTCAGATATTTTGAAATGTATTGGAGACAATAAGAAGCATATGAGAGAATGCACTTTAGCTACTTTAGACTCATGGCTCTCTGCTGTGAATCTTGATAAAATGGTTCCTTATATCACGGCTGCTATAACAGAAACCAAGCTTGGTGCAGAAGGGCGCAAAGATCTCTTTGACTGGTTGACAAGGCAGCTTTCTGTGTTAAGTGAATATAATGACGCTGTATATCTTCTGAAACCAGCTTCCTCTGCTATGACGGATAAATCTTCAGATGTTCGTAAAGCAGCAGAGGCATGCATTGCTGAAATTTTGAGAGTTAGTGGACATGAAGCGGTTGAGAAAATTTTGAAAGATATCCAAGGGCCAGCTTTAGCTCTTGTTCTTGAACGGTTGAAGCCTTTCGGGTCTTCTCAAGCAATATCGACCGTACCAACATCCAAAAGCATCCCAAAGGTCGGAAAATCTGCTTCCAATGGAATTGTAAAGCCTGGAATGAAAGCCTTACCTTCAAGGACCAATGCAATGAAGGGATCAAGGCAAGGTTCAATACTGTCCGTCCAAGATATAGCTGTCCAGTCACAGGCCTTGATAAATGTTAAAGATTCAGTTAAGGTGGATAGGGAGAGAATAGTGGTTAAGAGGTTTAAGTTTGAAGAACCACGAATAGAACAGATTCAAGATCTTGAGAATGACATGATGAAGTACTTCAGAGAGGATCTGCATAGGCGGCTTCTTAGTACAGATTTTAAGAAGCAAGTTGATGGACTTGAGATGCTGCAGAAGGCACTTCCAACTATCAGAAAGGAAATGATTGAAGTTATGGATATAATGCTTAGATGGTTTGTTGTACAATTTTGTAAATCAAACACAACATCCTTGCTAAAGGTGCTGGAATTTCTTCATGACCTTTTTGACATGTTTAGGGATGAGGGATACATGTTGACCGAATCAGAAGCCGCAATTCTCCTTCCATGCCTAATGGAGAAGCTTGGGCATAATGGATCTGGAGTACGAAAAGAAATGAAGGAGCTAGCCAGACAAATTGTCGAGGCATATACTGCAGCAAAGAGTTTACCTTATATTTTGGAGGGATTGCGCTCTAAGAACTACCGGTCACGAATTGAGTGTGCTGAACTTGTCGGATATTTGATCGATCATCATGGAGCTGAGATCAGTGGACAATTAAAATCTTTGCAAATCGTTGCAAGCTTGACAGCAGAAAGAGAGAATGAAATTAGGAAGGCTGCTTTAAATACTCTAGCTTCTGGTTATAAGCTTCTTGGGGAGGACATATGGAGATATGTCGGGAAGCTAACAGGTGCTCAGAAAAGCTTGATAGAAGAGAGATTCAAGTATACGGTTAAAGATATGGAGAGAAATAAGGAAGGAAAGCCTGGCGAAGCTAGGGCTTCTTTGAGGCGTTCTGTTAGGGAAATTGGGTCTGATGTAGCAGAGCAGAGTGGAGAGCTTGCACGATCTATTGGTGCTCCAACACTTGCTAGGGGCAATTATGGTCATACTGAGATTCACAGGGAGAGACAGCTGATGCCTCGTGGATTTGCTGCTGTTAATGGCCCAACAGACTGGAATGAAGCTTTGGAGATCATTTCTTCTGAGGATCCTGATCAGTCGGTTGAAGGAATGAAAGTTGTGTGTCATGAGTTGGCACAGTCGTCCAATGATCCAGAAGGCAGTGCAATGGATGACCTAGTGAGGGATGCTGATAAACTCGTTTCATGCTTAGCAAAGAAGGCAACAACGACTTTTGACTTCAGTTTGACAGGAGCTTCATCTAGGTCCTGTAAATATGTACTGAACACTCTTATGCAGACATTTCAAAATAAAAGATTTGCACATGCTGTCAAGGAAAGTACTCTTGATAGTCTAATAACTGAGCTCCTGCTCTGGCTTTTGGATGAGAGGGTTCCCCATATGGATGATGGCAGCCAACTTCTGAAAGCCTTGAATGTCTTGATGCTAAAGATACTGGATAATGCAGACCGAACTTCATCCTTCGTGGTTCTTATCAATCTCTTACGTCCTTTAGATCCCTCAAGATGGCCTGCGCCTGCAGCGAATGAAACATTGGCTGCCAGAAACCAGAAGTTCTCTGATCTGGTTGTCAAATGTTTAATTAAACTTACAAAGGTTCTTCAAAGCACCATATATGATGTAGATTTGGACCACATCCTTCAAAGTATCCATTTATACCTTCAAGACTTGGGTATGGAAGAAATCCGGAGAAGAGCTGGTGCTGATGACAAACCATTGCGCATGGTGAAAACTGTTCTACATGAGCTTGTGAAGCTTCGGGGAGCTGCAATTAAAGGTCACCTTTCTATGGTTCCTATAGACATGAAGCCCCAGCCAATTATTCTTGCTTACATTGATCTTAATCTGGAGACTCTAGCGGCAGCAAGGATGTTGACGTCAACTGGGTCTGGGGGCCAAACTCATTGGGGTGATTCAGCAGCTAATAATCCTTCATCTGCTACACATTCTGCTGATGCACAATTAAAGCAAGAACTTGCTGCCATTTTCAAGAAGATTGGCGACAAGCAGACTTGCTCCATTGGTCTGTATGAACTATATCGTATAACCCAACTCTACCCTAAAGTTGATATATTCTCTCAGCTCCAAAATGCCAGTGAGGCTTTTCGGACTTATATTAGAGACGGTTTAACACAGATGGAGAAGAATGCAGCAGCTGGAAGGACACCTTCAAGTGTACCAATGCCTACTCCTCCCCCAGCTTCTCTGAGCGTTTCTTCGCCTGAATTTGCACCCCTTTCCCCTGTACACACAAATTCATTAATGGATTCAAAATCATTCAATGTGAAATCTGAACCAACTAGCTTTAACTTACCACCGGCATATGCTGAAGACAACAGGCTTCACAATGCCAATACTCCTAGAGGCCTGGTCGAAAACTCAATGGTCGACCCAAGGAATGAGAGATATATGGGTGGAGTGACTAGTGGGACACTAGATGCAATAAGAGAAAGGATGAAAAGCATGCAACTAGCGGCAGCTTCTGGAAACCTGGATTCAGAAGCTAGGCCATTAATGTATGTAAATGACAACCAGAATCTGGGACTCTCTGATCAGATAAATCGGGTATCAGAGAATACCCTCCAAAGTGGGGTTCTCCCTATGGATGAAAAGGCATTATCTGGGCTTCAAGCTCGGATGGAGAGACTAAAGAGTGGGACAATTGAACCCCTTTAA

Protein Analysis

2012

Amino Acids

221.74

Weight (kDa)

8.03

Isoelectric Point (pI)

42.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XMAP215_CLASP_TOG PF21041 157 - 362 4.8e-11 XMAP215/Dis1/CLASP, TOG domain
XMAP215_CLASP_TOG PF21041 725 - 935 4.6e-06 XMAP215/Dis1/CLASP, TOG domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1004, 4080
AatII GACGTC 1 cut(s) 5240
Acc16I TGCGCA 1 cut(s) 5081
Acc36I ACCTGC 1 cut(s) 2416
AccB1I GGYRCC 1 cut(s) 2693
AccB7I CCANNNNNTGG 1 cut(s) 5899
AccBSI CCGCTC 1 cut(s) 2074
AccI GTMKAC 2 cut(s) 4163, 5748
AccII CGCG 1 cut(s) 1096
AccIII TCCGGA 1 cut(s) 5046
AcoI YGGCCR 1 cut(s) 693
AcuI CTGAAG 7 cut(s) 777, 1764, 2597, 3060, 3499, 4564, 5709
AcvI CACGTG 1 cut(s) 2540
AcyI GRCGYC 1 cut(s) 5237
AfeI AGCGCT 1 cut(s) 1837
AfiI CCNNNNNNNGG 9 cut(s) 2456, 2703, 3263, 3388, 4522, 4866, 5149, 5899, 5950
AflII CTTAAG 4 cut(s) 469, 512, 2267, 2698
AflIII ACRYGT 2 cut(s) 3723, 3744
AgeI ACCGGT 1 cut(s) 3918
AhdI GACNNNNNGTC 1 cut(s) 3851
AhlI ACTAGT 1 cut(s) 5783
Alw21I GWGCWC 7 cut(s) 675, 2187, 2425, 2785, 4132, 4297, 4707
Alw26I GTCTC 6 cut(s) 2257, 2832, 4339, 5204, 5475, 5998
Alw44I GTGCAC 1 cut(s) 2421
AlwNI CAGNNNCTG 5 cut(s) 1652, 2513, 5516, 5843, 5899
Aor13HI TCCGGA 1 cut(s) 5046
Aor51HI AGCGCT 1 cut(s) 1837
ApaLI GTGCAC 1 cut(s) 2421
ArsI GACNNNNNNTTYG 2 cut(s) 1577, 1609
AseI ATTAAT 3 cut(s) 1925, 5621, 5873
AsiGI ACCGGT 1 cut(s) 3918
Asp700I GAANNNNTTC 4 cut(s) 3206, 3480, 3512, 3705
AspLEI GCGC 9 cut(s) 220, 343, 1159, 1838, 2661, 2970, 3906, 4876, 5082
AsuHPI GGTGA 8 cut(s) 121, 922, 964, 977, 1294, 5098, 5132, 5282
AsuII TTCGAA 1 cut(s) 1600
AsuNHI GCTAGC 1 cut(s) 3838
AvaII GGWCC 8 cut(s) 767, 1452, 2141, 2372, 2470, 3321, 4605, 4990
AxyI CCTNAGG 2 cut(s) 804, 2196
BaeGI GKGCMC 1 cut(s) 2425
BaeI ACNNNNGTAYC 2 cut(s) 282, 315
BamHI GGATCC 1 cut(s) 4426
BanI GGYRCC 1 cut(s) 2693
BanII GRGCYC 3 cut(s) 675, 2594, 4707
BarI GAAGNNNNNNTAC 2 cut(s) 2040, 2072
BauI CACGAG 1 cut(s) 4359
BbrPI CACGTG 1 cut(s) 2540
BbsI GAAGAC 7 cut(s) 185, 332, 1752, 2048, 2525, 3207, 5697
Bbv12I GWGCWC 7 cut(s) 675, 2187, 2425, 2785, 4132, 4297, 4707
BceAI ACGGC 6 cut(s) 31, 576, 708, 1868, 2219, 2946
BcgI CGANNNNNNTGC 4 cut(s) 25, 59, 92, 126
BciVI GTATCC 4 cut(s) 637, 1807, 3734, 5018
BclI TGATCA 2 cut(s) 4432, 5911
BcoDI GTCTC 6 cut(s) 2257, 2832, 4339, 5204, 5475, 5998
BcuI ACTAGT 1 cut(s) 5783
BfmI CTRYAG 6 cut(s) 789, 2303, 3584, 3867, 4878, 5157
BfoI RGCGCY 3 cut(s) 221, 1160, 1839
BfrI CTTAAG 4 cut(s) 469, 512, 2267, 2698
BfuAI ACCTGC 1 cut(s) 2416
BfuI GTATCC 4 cut(s) 637, 1807, 3734, 5018
BglI GCCNNNNNGGC 2 cut(s) 315, 5459
BglII AGATCT 2 cut(s) 2974, 3487
BlpI GCTNAGC 2 cut(s) 669, 4549
BmcAI AGTACT 2 cut(s) 3512, 4681
Bme18I GGWCC 8 cut(s) 767, 1452, 2141, 2372, 2470, 3321, 4605, 4990
BmeRI GACNNNNNGTC 1 cut(s) 3851
BmrI ACTGGG 3 cut(s) 696, 1288, 5253
BmtI GCTAGC 1 cut(s) 3842
BmuI ACTGGG 3 cut(s) 696, 1288, 5253
BoxI GACNNNNGTC 1 cut(s) 2305
BpiI GAAGAC 7 cut(s) 185, 332, 1752, 2048, 2525, 3207, 5697
BpmI CTGGAG 5 cut(s) 1478, 1595, 1975, 3834, 5228
Bpu1102I GCTNAGC 2 cut(s) 669, 4549
Bpu14I TTCGAA 1 cut(s) 1600
BpuEI CTTGAG 6 cut(s) 602, 1139, 3204, 3512, 3596, 4846
Bsa29I ATCGAT 1 cut(s) 3960
BsaAI YACGTR 2 cut(s) 245, 2540
BsaBI GATNNNNATC 2 cut(s) 4431, 5202
BsaHI GRCGYC 1 cut(s) 5237
BsaJI CCNNGG 8 cut(s) 47, 399, 1062, 1109, 1455, 1948, 3166, 5753
BsaWI WCCGGW 2 cut(s) 3918, 5046
BsaXI ACNNNNNCTCC 4 cut(s) 1997, 2027, 2772, 2802
Bsc4I CCNNNNNNNGG 9 cut(s) 2456, 2703, 3263, 3388, 4522, 4866, 5149, 5899, 5950
Bse118I RCCGGY 3 cut(s) 202, 3918, 5677
Bse21I CCTNAGG 2 cut(s) 804, 2196
Bse3DI GCAATG 5 cut(s) 2781, 3105, 3336, 4512, 5075
Bse8I GATNNNNATC 2 cut(s) 4431, 5202
BseAI TCCGGA 1 cut(s) 5046
BseCI ATCGAT 1 cut(s) 3960
BseDI CCNNGG 8 cut(s) 47, 399, 1062, 1109, 1455, 1948, 3166, 5753
BseJI GATNNNNATC 2 cut(s) 4431, 5202
BseLI CCNNNNNNNGG 9 cut(s) 2456, 2703, 3263, 3388, 4522, 4866, 5149, 5899, 5950
BseMI GCAATG 5 cut(s) 2781, 3105, 3336, 4512, 5075
BseRI GAGGAG 3 cut(s) 792, 843, 5541
BseSI GKGCMC 1 cut(s) 2425
BseYI CCCAGC 2 cut(s) 5172, 5557
BsgI GTGCAG 4 cut(s) 227, 1692, 2394, 2979
Bsh1236I CGCG 1 cut(s) 1096
Bsh1285I CGRYCG 1 cut(s) 3234
BshNI GGYRCC 1 cut(s) 2693
BshTI ACCGGT 1 cut(s) 3918
BshVI ATCGAT 1 cut(s) 3960
BsiEI CGRYCG 1 cut(s) 3234
BsiHKAI GWGCWC 7 cut(s) 675, 2187, 2425, 2785, 4132, 4297, 4707
BsiSI CCGG 4 cut(s) 203, 3919, 5047, 5678
BslFI GGGAC 7 cut(s) 703, 890, 1438, 1931, 5803, 5916, 6031
BslI CCNNNNNNNGG 9 cut(s) 2456, 2703, 3263, 3388, 4522, 4866, 5149, 5899, 5950
BsmAI GTCTC 6 cut(s) 2257, 2832, 4339, 5204, 5475, 5998
BsmBI CGTCTC 1 cut(s) 5475
BsmFI GGGAC 7 cut(s) 703, 890, 1438, 1931, 5803, 5916, 6031
BsmI GAATGC 3 cut(s) 2808, 2867, 5512
Bsp119I TTCGAA 1 cut(s) 1600
Bsp1286I GDGCHC 8 cut(s) 675, 2187, 2425, 2594, 2785, 4132, 4297, 4707
Bsp13I TCCGGA 1 cut(s) 5046
Bsp1407I TGTACA 2 cut(s) 3655, 5605
Bsp1720I GCTNAGC 2 cut(s) 669, 4549
Bsp19I CCATGG 1 cut(s) 399
BspDI ATCGAT 1 cut(s) 3960
BspEI TCCGGA 1 cut(s) 5046
BspFNI CGCG 1 cut(s) 1096
BspHI TCATGA 3 cut(s) 2175, 3709, 4465
BspMAI CTGCAG 4 cut(s) 2307, 3588, 3871, 4882
BspMI ACCTGC 1 cut(s) 2416
BspOI GCTAGC 1 cut(s) 3842
BspQI GCTCTTC 2 cut(s) 1826, 5047
BspT104I TTCGAA 1 cut(s) 1600
BspT107I GGYRCC 1 cut(s) 2693
BspTI CTTAAG 4 cut(s) 469, 512, 2267, 2698
BsrBI CCGCTC 1 cut(s) 2074
BsrDI GCAATG 5 cut(s) 2781, 3105, 3336, 4512, 5075
BsrFI RCCGGY 3 cut(s) 202, 3918, 5677
BsrGI TGTACA 2 cut(s) 3655, 5605
BssAI RCCGGY 3 cut(s) 202, 3918, 5677
BssECI CCNNGG 8 cut(s) 47, 399, 1062, 1109, 1455, 1948, 3166, 5753
BssNAI GTATAC 1 cut(s) 4164
BssNI GRCGYC 1 cut(s) 5237
BssSI CACGAG 1 cut(s) 4359
BssT1I CCWWGG 4 cut(s) 399, 1062, 3166, 5753
Bst1107I GTATAC 1 cut(s) 4164
Bst2BI CACGAG 1 cut(s) 4359
Bst6I CTCTTC 7 cut(s) 9, 1176, 1625, 1826, 2640, 4143, 5047
BstACI GRCGYC 1 cut(s) 5237
BstAFI CTTAAG 4 cut(s) 469, 512, 2267, 2698
BstAPI GCANNNNNTGC 4 cut(s) 233, 1652, 3107, 3866
BstAUI TGTACA 2 cut(s) 3655, 5605
BstBAI YACGTR 2 cut(s) 245, 2540
BstBI TTCGAA 1 cut(s) 1600
BstDSI CCRYGG 2 cut(s) 47, 399
BstEII GGTNACC 1 cut(s) 5138
BstFNI CGCG 1 cut(s) 1096
BstH2I RGCGCY 3 cut(s) 221, 1160, 1839
BstHHI GCGC 9 cut(s) 220, 343, 1159, 1838, 2661, 2970, 3906, 4876, 5082
BstMAI GTCTC 6 cut(s) 2257, 2832, 4339, 5204, 5475, 5998
BstMCI CGRYCG 1 cut(s) 3234
BstNSI RCATGY 6 cut(s) 1621, 3105, 3727, 3748, 4667, 5827
BstPAI GACNNNNGTC 1 cut(s) 2305
BstPI GGTNACC 1 cut(s) 5138
BstSFI CTRYAG 6 cut(s) 789, 2303, 3584, 3867, 4878, 5157
BstSLI GKGCMC 1 cut(s) 2425
BstUI CGCG 1 cut(s) 1096
BstV2I GAAGAC 7 cut(s) 185, 332, 1752, 2048, 2525, 3207, 5697
BstX2I RGATCY 8 cut(s) 716, 1670, 2974, 3487, 3523, 3809, 4426, 4855
BstXI CCANNNNNNTGG 2 cut(s) 2672, 4392
BstYI RGATCY 8 cut(s) 716, 1670, 2974, 3487, 3523, 3809, 4426, 4855
BstZ17I GTATAC 1 cut(s) 4164
Bsu15I ATCGAT 1 cut(s) 3960
Bsu36I CCTNAGG 2 cut(s) 804, 2196
BsuI GTATCC 4 cut(s) 637, 1807, 3734, 5018
BsuTUI ATCGAT 1 cut(s) 3960
BtgI CCRYGG 2 cut(s) 47, 399
BtgZI GCGATG 2 cut(s) 2036, 2120
BtsI GCAGTG 3 cut(s) 1527, 2016, 4507
BveI ACCTGC 1 cut(s) 2416
CaiI CAGNNNCTG 5 cut(s) 1652, 2513, 5516, 5843, 5899
CciI TCATGA 3 cut(s) 2175, 3709, 4465
CfoI GCGC 9 cut(s) 220, 343, 1159, 1838, 2661, 2970, 3906, 4876, 5082
Cfr10I RCCGGY 3 cut(s) 202, 3918, 5677
ClaI ATCGAT 1 cut(s) 3960
CseI GACGC 3 cut(s) 152, 190, 3035
CspAI ACCGGT 1 cut(s) 3918
DraI TTTAAA 1 cut(s) 4059
DriI GACNNNNNGTC 1 cut(s) 3851
EaeI YGGCCR 1 cut(s) 693
Eam1104I CTCTTC 7 cut(s) 9, 1176, 1625, 1826, 2640, 4143, 5047
Eam1105I GACNNNNNGTC 1 cut(s) 3851
EarI CTCTTC 7 cut(s) 9, 1176, 1625, 1826, 2640, 4143, 5047
EciI GGCGGA 2 cut(s) 203, 266
Ecl136II GAGCTC 2 cut(s) 673, 4705
Eco130I CCWWGG 4 cut(s) 399, 1062, 3166, 5753
Eco147I AGGCCT 4 cut(s) 1441, 1636, 3392, 5727
Eco24I GRGCYC 3 cut(s) 675, 2594, 4707
Eco32I GATATC 3 cut(s) 2086, 2380, 3163
Eco47I GGWCC 8 cut(s) 767, 1452, 2141, 2372, 2470, 3321, 4605, 4990
Eco47III AGCGCT 1 cut(s) 1837
Eco53kI GAGCTC 2 cut(s) 673, 4705
Eco57I CTGAAG 7 cut(s) 777, 1764, 2597, 3060, 3499, 4564, 5709
Eco72I CACGTG 1 cut(s) 2540
Eco81I CCTNAGG 2 cut(s) 804, 2196
Eco91I GGTNACC 1 cut(s) 5138
EcoICRI GAGCTC 2 cut(s) 673, 4705
EcoO109I RGGNCCY 3 cut(s) 1066, 1452, 4605
EcoO65I GGTNACC 1 cut(s) 5138
EcoRI GAATTC 2 cut(s) 1579, 2329
EcoRV GATATC 3 cut(s) 2086, 2380, 3163
EcoT14I CCWWGG 4 cut(s) 399, 1062, 3166, 5753
EcoT22I ATGCAT 3 cut(s) 229, 1185, 3107
EcoT38I GRGCYC 3 cut(s) 675, 2594, 4707
ErhI CCWWGG 4 cut(s) 399, 1062, 3166, 5753
Esp3I CGTCTC 1 cut(s) 5475
FaqI GGGAC 7 cut(s) 703, 890, 1438, 1931, 5803, 5916, 6031
FauI CCCGC 1 cut(s) 2067
FauNDI CATATG 5 cut(s) 2452, 2853, 4100, 4740, 5683
FbaI TGATCA 2 cut(s) 4432, 5911
FblI GTMKAC 2 cut(s) 4163, 5748
FriOI GRGCYC 3 cut(s) 675, 2594, 4707
FspI TGCGCA 1 cut(s) 5081
GlaI GCGC 9 cut(s) 219, 342, 1158, 1837, 2660, 2969, 3905, 4875, 5081
GsaI CCCAGC 2 cut(s) 5176, 5561
GsuI CTGGAG 5 cut(s) 1478, 1595, 1975, 3834, 5228
HaeII RGCGCY 3 cut(s) 221, 1160, 1839
HapII CCGG 4 cut(s) 203, 3919, 5047, 5678
HgaI GACGC 3 cut(s) 152, 190, 3035
HhaI GCGC 9 cut(s) 220, 343, 1159, 1838, 2661, 2970, 3906, 4876, 5082
Hin1I GRCGYC 1 cut(s) 5237
Hin6I GCGC 9 cut(s) 218, 341, 1157, 1836, 2659, 2968, 3904, 4874, 5080
HinP1I GCGC 9 cut(s) 218, 341, 1157, 1836, 2659, 2968, 3904, 4874, 5080
HincII GTYRAC 6 cut(s) 1210, 2991, 3750, 5235, 5241, 5749
HindII GTYRAC 6 cut(s) 1210, 2991, 3750, 5235, 5241, 5749
HpaII CCGG 4 cut(s) 203, 3919, 5047, 5678
HphI GGTGA 8 cut(s) 121, 922, 964, 977, 1294, 5098, 5132, 5282
Hpy99I CGWCG 2 cut(s) 10, 2240
HpyCH4IV ACGT 5 cut(s) 244, 1749, 2539, 4846, 5237
HpySE526I ACGT 5 cut(s) 244, 1749, 2539, 4846, 5237
Hsp92I GRCGYC 1 cut(s) 5237
HspAI GCGC 9 cut(s) 218, 341, 1157, 1836, 2659, 2968, 3904, 4874, 5080
Kpn2I TCCGGA 1 cut(s) 5046
Ksp22I TGATCA 2 cut(s) 4432, 5911
LguI GCTCTTC 2 cut(s) 1826, 5047
MaeII ACGT 5 cut(s) 244, 1749, 2539, 4846, 5237
MbiI CCGCTC 1 cut(s) 2074
MfeI CAATTG 4 cut(s) 447, 1826, 2619, 6021
MflI RGATCY 8 cut(s) 716, 1670, 2974, 3487, 3523, 3809, 4426, 4855
MhlI GDGCHC 8 cut(s) 675, 2187, 2425, 2594, 2785, 4132, 4297, 4707
MmeI TCCRAC 6 cut(s) 575, 2505, 3244, 3623, 3928, 4322
Mph1103I ATGCAT 3 cut(s) 229, 1185, 3107
MroI TCCGGA 1 cut(s) 5046
MroXI GAANNNNTTC 4 cut(s) 3206, 3480, 3512, 3705
MslI CAYNNNNRTG 5 cut(s) 895, 2021, 4631, 4743, 5268
MspA1I CMGCKG 4 cut(s) 794, 1190, 4351, 5516
MspCI CTTAAG 4 cut(s) 469, 512, 2267, 2698
MspI CCGG 4 cut(s) 203, 3919, 5047, 5678
MunI CAATTG 4 cut(s) 447, 1826, 2619, 6021
Mva1269I GAATGC 3 cut(s) 2808, 2867, 5512
MvnI CGCG 1 cut(s) 1096
NcoI CCATGG 1 cut(s) 399
NdeI CATATG 5 cut(s) 2452, 2853, 4100, 4740, 5683
NheI GCTAGC 1 cut(s) 3838
NmeAIII GCCGAG 1 cut(s) 1029
NmuCI GTSAC 8 cut(s) 682, 965, 1282, 2560, 3384, 3921, 5138, 5779
NsbI TGCGCA 1 cut(s) 5081
NsiI ATGCAT 3 cut(s) 229, 1185, 3107
NspI RCATGY 6 cut(s) 1621, 3105, 3727, 3748, 4667, 5827
NspV TTCGAA 1 cut(s) 1600
PacI TTAATTAA 1 cut(s) 4944
PaeI GCATGC 3 cut(s) 1621, 3105, 5827
PagI TCATGA 3 cut(s) 2175, 3709, 4465
PceI AGGCCT 4 cut(s) 1441, 1636, 3392, 5727
PciI ACATGT 2 cut(s) 3723, 3744
PciSI GCTCTTC 2 cut(s) 1826, 5047
PctI GAATGC 3 cut(s) 2808, 2867, 5512
PdmI GAANNNNTTC 4 cut(s) 3206, 3480, 3512, 3705
PflMI CCANNNNNTGG 1 cut(s) 5899
PfoI TCCNGGA 1 cut(s) 2143
PinAI ACCGGT 1 cut(s) 3918
PmaCI CACGTG 1 cut(s) 2540
PmlI CACGTG 1 cut(s) 2540
Ppu21I YACGTR 2 cut(s) 245, 2540
PpuMI RGGWCCY 2 cut(s) 1452, 4605
PscI ACATGT 2 cut(s) 3723, 3744
PshAI GACNNNNGTC 1 cut(s) 2305
PshBI ATTAAT 3 cut(s) 1925, 5621, 5873
PsiI TTATAA 2 cut(s) 1004, 4080
Psp124BI GAGCTC 2 cut(s) 675, 4707
Psp5II RGGWCCY 2 cut(s) 1452, 4605
PspCI CACGTG 1 cut(s) 2540
PspEI GGTNACC 1 cut(s) 5138
PspFI CCCAGC 2 cut(s) 5172, 5557
PspPPI RGGWCCY 2 cut(s) 1452, 4605
PstI CTGCAG 4 cut(s) 2307, 3588, 3871, 4882
PstNI CAGNNNCTG 5 cut(s) 1652, 2513, 5516, 5843, 5899
PsuI RGATCY 8 cut(s) 716, 1670, 2974, 3487, 3523, 3809, 4426, 4855
PvuII CAGCTG 3 cut(s) 1190, 4351, 5516
RseI CAYNNNNRTG 5 cut(s) 895, 2021, 4631, 4743, 5268
SacI GAGCTC 2 cut(s) 675, 4707
SalI GTCGAC 1 cut(s) 5747
SapI GCTCTTC 2 cut(s) 1826, 5047
ScaI AGTACT 2 cut(s) 3512, 4681
SduI GDGCHC 8 cut(s) 675, 2187, 2425, 2594, 2785, 4132, 4297, 4707
SfcI CTRYAG 6 cut(s) 789, 2303, 3584, 3867, 4878, 5157
SfuI TTCGAA 1 cut(s) 1600
SgrAI CRCCGGYG 1 cut(s) 202
SinI GGWCC 8 cut(s) 767, 1452, 2141, 2372, 2470, 3321, 4605, 4990
SmiMI CAYNNNNRTG 5 cut(s) 895, 2021, 4631, 4743, 5268
SpeI ACTAGT 1 cut(s) 5783
SphI GCATGC 3 cut(s) 1621, 3105, 5827
SseBI AGGCCT 4 cut(s) 1441, 1636, 3392, 5727
SspI AATATT 2 cut(s) 624, 2217
SstI GAGCTC 2 cut(s) 675, 4707
StuI AGGCCT 4 cut(s) 1441, 1636, 3392, 5727
StyI CCWWGG 4 cut(s) 399, 1062, 3166, 5753
TaiI ACGT 5 cut(s) 247, 1752, 2542, 4849, 5240
TaqI TCGA 9 cut(s) 102, 1600, 2238, 2488, 3230, 3855, 3960, 5733, 5748
TaqII GACCGA 2 cut(s) 3767, 4824
TatI WGTACW 6 cut(s) 3510, 3545, 3655, 4618, 4679, 5605
TauI GCSGC 5 cut(s) 251, 3538, 3767, 5222, 5837
TseFI GTSAC 8 cut(s) 682, 965, 1282, 2560, 3384, 3921, 5138, 5779
Tsp45I GTSAC 8 cut(s) 682, 965, 1282, 2560, 3384, 3921, 5138, 5779
TspGWI ACGGA 4 cut(s) 894, 2411, 3080, 3352
Van91I CCANNNNNTGG 1 cut(s) 5899
Vha464I CTTAAG 4 cut(s) 469, 512, 2267, 2698
VneI GTGCAC 1 cut(s) 2421
VpaK11BI GGWCC 8 cut(s) 767, 1452, 2141, 2372, 2470, 3321, 4605, 4990
VspI ATTAAT 3 cut(s) 1925, 5621, 5873
XceI RCATGY 6 cut(s) 1621, 3105, 3727, 3748, 4667, 5827
XcmI CCANNNNNNNNNTGG 2 cut(s) 103, 4745
XmiI GTMKAC 2 cut(s) 4163, 5748
XmnI GAANNNNTTC 4 cut(s) 3206, 3480, 3512, 3705
ZraI GACGTC 1 cut(s) 5238
ZrmI AGTACT 2 cut(s) 3512, 4681
Zsp2I ATGCAT 3 cut(s) 229, 1185, 3107
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.