FvH4_7g33680

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Forward (+)
23908137 .. 23908508
372 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g33680.t1

Sequence Viewer

Length: 372 bp
ATGCCTCAAGCTCTATGTTACTTATGGTGTGTTATCCACATTTTGGTGAGCAGTCAAAATCTCGATGGCAAAAGAGCTTTGGATTTTACTTCCCAGTCATTGCCAATAGGTAGAAAGTCACCAGGTGTTGTTGTCGGAGTTCTTGTTCACATGCTGAGAACAGCTCCGCCCCTGCGCCAAAATTCAAGTTGTTACTCTTCTCACTCCATGAAGCCTGAGCATGAGGAAGGAGTGTCCACAGCTTCCGGTTTCTTTATGCCTCGAAAGACATCTGATGCCCTGGAAGAGCTTAGAAGTTACAGAGAAATGAAAGACCTAGCCCTTCTAATCTCAAAGAGTGGAATGAGGGTGCTCACCAAAGAGGAGGCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000166 GO:0000278 GO:0000280 GO:0000281 GO:0000910 GO:0000911 GO:0001101 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005856 GO:0005874 GO:0005881 GO:0006355 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006935 GO:0006996 GO:0007049 GO:0007112 GO:0007140 GO:0007154 GO:0007163 GO:0007165 GO:0007166 GO:0007224 GO:0007227 GO:0007228 GO:0007275 GO:0007276 GO:0007349 GO:0007584 GO:0008064 GO:0008092 GO:0008134 GO:0008144 GO:0008150 GO:0008152 GO:0008589 GO:0009524 GO:0009553 GO:0009558 GO:0009561 GO:0009605 GO:0009653 GO:0009791 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0009991 GO:0010033 GO:0010243 GO:0010468 GO:0010556 GO:0010639 GO:0010646 GO:0010647 GO:0014070 GO:0015630 GO:0016043 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017076 GO:0019219 GO:0019222 GO:0019538 GO:0019894 GO:0019953 GO:0022402 GO:0022412 GO:0022414 GO:0022607 GO:0023051 GO:0023052 GO:0023056 GO:0030010 GO:0030030 GO:0030031 GO:0030554 GO:0030832 GO:0030833 GO:0030837 GO:0031156 GO:0031272 GO:0031323 GO:0031326 GO:0031333 GO:0031344 GO:0031667 GO:0032101 GO:0032104 GO:0032107 GO:0032271 GO:0032272 GO:0032501 GO:0032502 GO:0032504 GO:0032506 GO:0032535 GO:0032553 GO:0032555 GO:0032559 GO:0032956 GO:0032970 GO:0033043 GO:0033206 GO:0033273 GO:0035556 GO:0035639 GO:0036094 GO:0036211 GO:0040011 GO:0042221 GO:0042330 GO:0042493 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043254 GO:0043326 GO:0043327 GO:0043412 GO:0043900 GO:0044085 GO:0044087 GO:0044093 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0044703 GO:0044782 GO:0045880 GO:0048229 GO:0048232 GO:0048285 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0048609 GO:0048646 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051090 GO:0051091 GO:0051128 GO:0051129 GO:0051171 GO:0051252 GO:0051301 GO:0051321 GO:0051493 GO:0051494 GO:0051593 GO:0051704 GO:0051716 GO:0060176 GO:0060255 GO:0060271 GO:0060491 GO:0061640 GO:0065007 GO:0065008 GO:0065009 GO:0070925 GO:0071704 GO:0071840 GO:0080090 GO:0080134 GO:0080135 GO:0090066 GO:0097159 GO:0097367 GO:0099080 GO:0099081 GO:0099512 GO:0099513 GO:0110053 GO:0120031 GO:0120032 GO:0120035 GO:0120036 GO:0140013 GO:0140096 GO:1901265 GO:1901363 GO:1901564 GO:1901698 GO:1901700 GO:1902410 GO:1902903 GO:1902904 GO:1903046 GO:1903047 GO:1903506 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

124

Amino Acids

13.68

Weight (kDa)

8.88

Isoelectric Point (pI)

64.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 43
AciI CCGC 1 cut(s) 167
AcsI RAATTY 1 cut(s) 181
AdeI CACNNNGTG 1 cut(s) 125
AfiI CCNNNNNNNGG 1 cut(s) 43
AgsI TTSAA 1 cut(s) 186
AjnI CCWGG 2 cut(s) 121, 279
AloI GAACNNNNNNTCC 2 cut(s) 129, 161
AluBI AGCT 5 cut(s) 11, 77, 164, 242, 289
AluI AGCT 5 cut(s) 11, 77, 164, 242, 289
Alw21I GWGCWC 1 cut(s) 354
ApoI RAATTY 1 cut(s) 181
AspLEI GCGC 1 cut(s) 177
AsuHPI GGTGA 3 cut(s) 58, 111, 346
Bbv12I GWGCWC 1 cut(s) 354
BccI CCATC 1 cut(s) 59
BciT130I CCWGG 2 cut(s) 123, 281
BfaI CTAG 1 cut(s) 317
Bme1390I CCNGG 2 cut(s) 123, 281
BmrFI CCNGG 2 cut(s) 123, 281
BmrI ACTGGG 1 cut(s) 88
BmsI GCATC 1 cut(s) 265
BmuI ACTGGG 1 cut(s) 88
BplI GAGNNNNNCTC 2 cut(s) 148, 180
Bpu10I CCTNAGC 1 cut(s) 216
BsaJI CCNNGG 1 cut(s) 279
BsaWI WCCGGW 1 cut(s) 245
BsaXI ACNNNNNCTCC 2 cut(s) 129, 159
Bsc4I CCNNNNNNNGG 1 cut(s) 43
Bse1I ACTGG 1 cut(s) 94
Bse3DI GCAATG 1 cut(s) 98
BseBI CCWGG 2 cut(s) 123, 281
BseDI CCNNGG 1 cut(s) 279
BseLI CCNNNNNNNGG 1 cut(s) 43
BseMI GCAATG 1 cut(s) 98
BseMII CTCAG 2 cut(s) 146, 207
BseNI ACTGG 1 cut(s) 94
BsiHKAI GWGCWC 1 cut(s) 354
BsiSI CCGG 1 cut(s) 246
BslI CCNNNNNNNGG 1 cut(s) 43
Bsp1286I GDGCHC 1 cut(s) 354
BspACI CCGC 1 cut(s) 167
BspCNI CTCAG 2 cut(s) 147, 208
BspQI GCTCTTC 1 cut(s) 279
BsrDI GCAATG 1 cut(s) 98
BsrI ACTGG 1 cut(s) 94
BssECI CCNNGG 1 cut(s) 279
Bst2UI CCWGG 2 cut(s) 123, 281
Bst6I CTCTTC 2 cut(s) 202, 279
BstDEI CTNAG 3 cut(s) 155, 216, 290
BstHHI GCGC 1 cut(s) 177
BstNI CCWGG 2 cut(s) 123, 281
BstNSI RCATGY 1 cut(s) 154
BstSCI CCNGG 2 cut(s) 121, 279
CfoI GCGC 1 cut(s) 177
CsiI ACCWGGT 1 cut(s) 121
CviAII CATG 3 cut(s) 151, 208, 221
CviJI RGCY 7 cut(s) 11, 77, 164, 214, 242, 289, 320
CviKI_1 RGCY 7 cut(s) 11, 77, 164, 214, 242, 289, 320
DdeI CTNAG 3 cut(s) 155, 216, 290
DraIII CACNNNGTG 1 cut(s) 125
Eam1104I CTCTTC 2 cut(s) 202, 279
EarI CTCTTC 2 cut(s) 202, 279
EciI GGCGGA 1 cut(s) 156
EcoRII CCWGG 2 cut(s) 121, 279
FaeI CATG 3 cut(s) 154, 211, 224
FaiI YATR 7 cut(s) 16, 25, 152, 209, 222, 257, 370
FatI CATG 3 cut(s) 150, 207, 220
FspBI CTAG 1 cut(s) 317
GlaI GCGC 1 cut(s) 176
HapII CCGG 1 cut(s) 246
HhaI GCGC 1 cut(s) 177
Hin1II CATG 3 cut(s) 154, 211, 224
Hin6I GCGC 1 cut(s) 175
HinP1I GCGC 1 cut(s) 175
HpaII CCGG 1 cut(s) 246
HphI GGTGA 3 cut(s) 58, 111, 346
Hpy166II GTNNAC 2 cut(s) 148, 237
Hpy188I TCNGA 2 cut(s) 137, 274
Hpy188III TCNNGA 1 cut(s) 62
Hpy8I GTNNAC 2 cut(s) 148, 237
HpyAV CCTTC 2 cut(s) 221, 332
HpyF3I CTNAG 3 cut(s) 155, 216, 290
Hsp92II CATG 3 cut(s) 154, 211, 224
HspAI GCGC 1 cut(s) 175
LguI GCTCTTC 1 cut(s) 279
LmnI GCTCC 1 cut(s) 169
LpnPI CCDG 8 cut(s) 107, 108, 135, 185, 228, 259, 266, 293
LweI GCATC 1 cut(s) 265
MabI ACCWGGT 1 cut(s) 121
MaeI CTAG 1 cut(s) 317
MaeIII GTNAC 4 cut(s) 17, 117, 191, 296
MboII GAAGA 2 cut(s) 189, 296
MhlI GDGCHC 1 cut(s) 354
MluCI AATT 1 cut(s) 181
MmeI TCCRAC 1 cut(s) 115
MnlI CCTC 6 cut(s) 15, 217, 270, 339, 355, 358
MslI CAYNNNNRTG 1 cut(s) 44
MspI CCGG 1 cut(s) 246
MspR9I CCNGG 2 cut(s) 123, 281
MvaI CCWGG 2 cut(s) 123, 281
NlaIII CATG 3 cut(s) 154, 211, 224
NmuCI GTSAC 1 cut(s) 117
NspI RCATGY 1 cut(s) 154
PciSI GCTCTTC 1 cut(s) 279
PflMI CCANNNNNTGG 1 cut(s) 43
Psp6I CCWGG 2 cut(s) 121, 279
PspGI CCWGG 2 cut(s) 121, 279
RseI CAYNNNNRTG 1 cut(s) 44
SapI GCTCTTC 1 cut(s) 279
ScrFI CCNGG 2 cut(s) 123, 281
SduI GDGCHC 1 cut(s) 354
SetI ASST 8 cut(s) 13, 79, 112, 127, 166, 244, 291, 318
SexAI ACCWGGT 1 cut(s) 121
SfaNI GCATC 1 cut(s) 265
SmiMI CAYNNNNRTG 1 cut(s) 44
SmlI CTYRAG 1 cut(s) 6
SmoI CTYRAG 1 cut(s) 6
Sse9I AATT 1 cut(s) 181
SsiI CCGC 1 cut(s) 167
SspMI CTAG 1 cut(s) 317
StyD4I CCNGG 2 cut(s) 121, 279
TaqI TCGA 2 cut(s) 63, 262
TasI AATT 1 cut(s) 181
TseFI GTSAC 1 cut(s) 117
Tsp45I GTSAC 1 cut(s) 117
TspDTI ATGAA 2 cut(s) 224, 323
Van91I CCANNNNNTGG 1 cut(s) 43
XapI RAATTY 1 cut(s) 181
XceI RCATGY 1 cut(s) 154
XspI CTAG 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.