Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0008723

Physical Location & Seq

Genomic Coordinates Forward (+)

21075486 .. 21078071

Gene Structure 2586 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g23960.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1863 bp

ATGGACTTTCAGAATTATTCTCAGCTAGAATCGGGGAAAATGGAACAGATAGTTTCCCAATTTCTGTTGAAGAGCTTGCATATTGTTTTGGACTCTAGGATTCCTTCTCTTCACCCGCATGATCGCAGCGGTGACCTGTCATCTGCAACTCGAGTGAGAAAGAGTGACAAGTGGTTTAACTTAATACTAGGGGACCGCCCTGCAGCTCTTGAGAATTTGAATTTTTGGCACAGAAATGTAATGGATCCGATGATAATTGACATAATACTTGTTCATGGAGGACCTAGTTCTTCTTCTATTGACAATCTGTATGTGAATTCTGTGGAGGGGACATCTGTTGAGACGATCATAGAGAGGTGGGTTGTCCAGTACGAAACTCCACGGGTTGTGGCTCCTCAAACTGGTGACACTTCGGCCTTTTACAAGAAAACATACAAGAAGTCCATCATACTTTTACGTACCCTTTATTCGTATATGAGGCTTCTTCCAGCTTATAGGATCTTTAGACAGCTAAGTACATCTAGTCAGACTTACAATTTTCATATCATCTACAAGGTGTCTTCACTTAGAGATCCATTCTCAAGGGCGGAGGAGGAACTAATGGAGGAGCACAGTTTTGCTCCCGTAGAGGCTCATCCTGGCCGCCTTTCTTTATCTGTGACTTACCGTTCAACACTAGCTGATTTCAATCTTGAGCCTTCAGTACCAATGCCACCAAGGATAATTACTGATTATGTTGGTAGTCCTGCCACTGACCCCCTGAGGTCTTTCCCCTCATCAGAGAAGGGTTTTAGTGCAACTTCCTTTACGTTGGGAGGAGCACGACCACCATCTGGTGCGCCACACCAACACCCACACAGCTGGACAAGTGGCTTCCACAGGTCACCTTCCTCTGTACACAATAAACCCTTAGTTGGATCTCCAACAGCATATCATGCATCTCCTATGTCATATGATGTTGGATCTCCTCCTATTGATACATTTGCTAACAGAGGTCAAAACTTTAGATCTCTAAGTCATCGAAGAAATGTGAGTTCTGATGAGTATCAGCTTTCACCTCCATTTTCGGCATCCCCATCGCCATCTCCCCCAACATACTTGTCCAGTGGTCATTTCAGTCCTATGCAAACTCGAATTCGTTCGGGAAGTTCCCCTGTAAGCATCCCCCTTCCAATGGGGGGCAGAAGCCCTAGATGCTTATCCCCCAATTTTTCTGATCCAAGTAGAAATTCTCTTCCTCCTTTATCATCCAGAAGCACAAGAAATGATCATTCCTGTCAAGAGTCTCCATCAGGAATCAGGGCAATCAGAAAATTGGAGGTTTCAAGGGCCGGAGAGACTCACCCTGGAAATTTGAATCATTACATTGGTCAGAAGGTGACGAAAGACAGCAAAGATGATTCAGGGCGTTTCTCAGGATTGTTGTCGTCTAGTGGCTCACCACGTGTTGGATTTTCTAGAAGCTCTAGTAGATTGTCTTTCCAGGACGATTTGGATGATTTTGATATCTCATGTCCTTTCGACGTGGATGATGTTGATACATCAGATTCTCAAACCAGTGACAGCAAAGGGCCTTCAGAGTTCATATCTCAGTCACTGCCAATGGGTAGAAAATCACAAGATGCTGCTGTCGGCGTTCTCGTTCAGATGCTGAAGACGGCTCCGCCTCTGCGCCAAGATTCAAGTTGTTACTCATCCCAGTCCGGAAAGAATGAGCATGAGGGAGGAGTTGCTACGGCTTCTGGTTTCCTTATGCCTCGGAAGACATCTGATGCACTGGAGGAGCTCAGAAGTTACCGAGAAATGAAAGACCTTCTTCTCTCTAAAAGCGGAATGGGGGTGCTTGCCAAAGATGAATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005776 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0061919

KEGG Pathways

Metabolic & Signaling

ko04136 ko04138 ko04140 ko04211 map04136 map04138 map04140 map04211

Pfam Domains

Protein Families

ATG13

Protein Analysis

621

Amino Acids

68.36

Weight (kDa)

8.19

Isoelectric Point (pI)

65.36

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ATG13	PF10033	18 - 225	3.9e-35	Autophagy-related protein 13

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008723)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G49590 AT3G49590 AT3G49590
fragaria_vesca	FvH4_7g33350 FvH4_7g33350 FvH4_7g33680
malus_domestica	MD01G1231700.v1.1 MD07G1303800.v1.1
prunus_persica	Prupe.2G322400_v2.0.a1 Prupe.2G322400_v2.0.a1
pyrus_communis	pycom01g23960 pycom07g27650 pycom07g27660
rosa_chinensis	RchiOBHm_Chr1g0383331
rosa_laevigata	RLG00000026112
rosa_multiflora	Rmu_sc0007173.1_g000015
rosa_roxburghii	Rroxscaffold_4G00277390
rosa_rugosa	Rorug01G0440500
rosa_samantha	Rh1AG466400 Rh1BG423700 Rh1CG436900 Rh1DG456400
rosa_wichuraiana	Rw1G040610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	833, 1448
AccIII	TCCGGA	1 cut(s)	1703
AciI	CCGC	7 cut(s)	116, 129, 196, 587, 643, 1664, 1830
AclWI	GGATC	7 cut(s)	239, 252, 506, 566, 925, 970, 1211
AcoI	YGGCCR	1 cut(s)	640
AcsI	RAATTY	6 cut(s)	214, 220, 316, 1134, 1228, 1351
AcuI	CTGAAG	3 cut(s)	684, 1560, 1673
AcvI	CACGTG	1 cut(s)	1445
AdeI	CACNNNGTG	1 cut(s)	1445
AfaI	GTAC	5 cut(s)	371, 460, 517, 705, 897
AfiI	CCNNNNNNNGG	6 cut(s)	401, 833, 914, 1174, 1178, 1448
AflIII	ACRYGT	1 cut(s)	1444
AgsI	TTSAA	7 cut(s)	70, 220, 672, 688, 1326, 1357, 1683
AjiI	CACGTC	1 cut(s)	1525
AjnI	CCWGG	3 cut(s)	637, 1345, 1482
AjuI	GAANNNNNNNTTGG	2 cut(s)	1213, 1245
Alw21I	GWGCWC	3 cut(s)	612, 823, 1788
Alw26I	GTCTC	3 cut(s)	335, 1290, 1331
AlwI	GGATC	7 cut(s)	239, 252, 506, 566, 925, 970, 1211
AlwNI	CAGNNNCTG	2 cut(s)	1597, 1651
Ama87I	CYCGRG	1 cut(s)	150
Aor13HI	TCCGGA	1 cut(s)	1703
AoxI	GGCC	4 cut(s)	414, 640, 1329, 1571
ApeKI	GCWGC	3 cut(s)	126, 203, 1625
ApoI	RAATTY	6 cut(s)	214, 220, 316, 1134, 1228, 1351
Asp700I	GAANNNNTTC	1 cut(s)	1138
AspLEI	GCGC	2 cut(s)	841, 1674
AspS9I	GGNCC	4 cut(s)	193, 281, 1329, 1571
AsuHPI	GGTGA	8 cut(s)	104, 143, 416, 876, 1047, 1334, 1390, 1431
AvaI	CYCGRG	1 cut(s)	150
AvaII	GGWCC	2 cut(s)	193, 281
AxyI	CCTNAGG	1 cut(s)	761
BamHI	GGATCC	1 cut(s)	244
BanII	GRGCYC	1 cut(s)	1788
BbrPI	CACGTG	1 cut(s)	1445
BbsI	GAAGAC	3 cut(s)	552, 1661, 1769
Bbv12I	GWGCWC	3 cut(s)	612, 823, 1788
BbvI	GCAGC	3 cut(s)	138, 215, 1612
BccI	CCATC	5 cut(s)	452, 838, 1084, 1090, 1297
BceAI	ACGGC	2 cut(s)	1674, 1752
BcgI	CGANNNNNNTGC	2 cut(s)	1059, 1093
BciT130I	CCWGG	3 cut(s)	639, 1347, 1484
BclI	TGATCA	1 cut(s)	1267
BcoDI	GTCTC	3 cut(s)	335, 1290, 1331
BfmI	CTRYAG	1 cut(s)	201
BglII	AGATCT	1 cut(s)	1007
BisI	GCNGC	4 cut(s)	127, 204, 643, 1626
BlsI	GCNGC	4 cut(s)	128, 205, 644, 1627
Bme1390I	CCNGG	3 cut(s)	639, 1347, 1484
Bme18I	GGWCC	2 cut(s)	193, 281
BmeT110I	CYCGRG	1 cut(s)	150
BmgBI	CACGTC	1 cut(s)	1525
BmgT120I	GGNCC	4 cut(s)	193, 281, 1329, 1571
BmiI	GGNNCC	4 cut(s)	194, 246, 393, 1662
BmrFI	CCNGG	3 cut(s)	639, 1347, 1484
BmrI	ACTGGG	1 cut(s)	1693
BmsI	GCATC	7 cut(s)	947, 1079, 1170, 1184, 1612, 1638, 1762
BmuI	ACTGGG	1 cut(s)	1693
BpiI	GAAGAC	3 cut(s)	552, 1661, 1769
BpmI	CTGGAG	1 cut(s)	1799
BpuEI	CTTGAG	3 cut(s)	230, 565, 713
BsaAI	YACGTR	2 cut(s)	458, 1445
BsaBI	GATNNNNATC	3 cut(s)	687, 1044, 1198
BsaJI	CCNNGG	4 cut(s)	380, 716, 1345, 1757
BsaWI	WCCGGW	1 cut(s)	1703
Bsc4I	CCNNNNNNNGG	6 cut(s)	401, 833, 914, 1174, 1178, 1448
Bse1I	ACTGG	6 cut(s)	367, 406, 1104, 1557, 1699, 1782
Bse21I	CCTNAGG	1 cut(s)	761
Bse8I	GATNNNNATC	3 cut(s)	687, 1044, 1198
BseAI	TCCGGA	1 cut(s)	1703
BseBI	CCWGG	3 cut(s)	639, 1347, 1484
BseDI	CCNNGG	4 cut(s)	380, 716, 1345, 1757
BseGI	GGATG	7 cut(s)	634, 1070, 1161, 1247, 1501, 1534, 1694
BseJI	GATNNNNATC	3 cut(s)	687, 1044, 1198
BseLI	CCNNNNNNNGG	6 cut(s)	401, 833, 914, 1174, 1178, 1448
BseMII	CTCAG	5 cut(s)	35, 752, 1428, 1604, 1801
BseNI	ACTGG	6 cut(s)	367, 406, 1104, 1557, 1699, 1782
BseRI	GAGGAG	7 cut(s)	384, 605, 620, 831, 957, 1740, 1796
BseXI	GCAGC	3 cut(s)	138, 215, 1612
BshFI	GGCC	4 cut(s)	416, 642, 1331, 1573
BsiHKAI	GWGCWC	3 cut(s)	612, 823, 1788
BsiHKCI	CYCGRG	1 cut(s)	150
BsiSI	CCGG	2 cut(s)	1332, 1704
BslFI	GGGAC	2 cut(s)	206, 343
BslI	CCNNNNNNNGG	6 cut(s)	401, 833, 914, 1174, 1178, 1448
BsmAI	GTCTC	3 cut(s)	335, 1290, 1331
BsmBI	CGTCTC	1 cut(s)	335
BsmFI	GGGAC	2 cut(s)	206, 343
BsnI	GGCC	4 cut(s)	416, 642, 1331, 1573
BsoBI	CYCGRG	1 cut(s)	150
Bsp1286I	GDGCHC	3 cut(s)	612, 823, 1788
Bsp13I	TCCGGA	1 cut(s)	1703
Bsp1407I	TGTACA	1 cut(s)	895
BspACI	CCGC	7 cut(s)	116, 129, 196, 587, 643, 1664, 1830
BspANI	GGCC	4 cut(s)	416, 642, 1331, 1573
BspCNI	CTCAG	5 cut(s)	34, 753, 1427, 1603, 1800
BspEI	TCCGGA	1 cut(s)	1703
BspLI	GGNNCC	4 cut(s)	194, 246, 393, 1662
BspMAI	CTGCAG	1 cut(s)	205
BspPI	GGATC	7 cut(s)	239, 252, 506, 566, 925, 970, 1211
BspQI	GCTCTTC	1 cut(s)	65
BsrGI	TGTACA	1 cut(s)	895
BsrI	ACTGG	6 cut(s)	367, 406, 1104, 1557, 1699, 1782
BssECI	CCNNGG	4 cut(s)	380, 716, 1345, 1757
BssT1I	CCWWGG	1 cut(s)	716
Bst2UI	CCWGG	3 cut(s)	639, 1347, 1484
Bst4CI	ACNGT	2 cut(s)	614, 668
Bst6I	CTCTTC	3 cut(s)	65, 114, 1239
BstAPI	GCANNNNNTGC	1 cut(s)	935
BstAUI	TGTACA	1 cut(s)	895
BstBAI	YACGTR	2 cut(s)	458, 1445
BstC8I	GCNNGC	2 cut(s)	77, 1845
BstDEI	CTNAG	9 cut(s)	21, 512, 566, 761, 910, 1013, 1414, 1590, 1787
BstDSI	CCRYGG	1 cut(s)	380
BstEII	GGTNACC	2 cut(s)	131, 882
BstF5I	GGATG	7 cut(s)	634, 1070, 1161, 1247, 1501, 1534, 1694
BstHHI	GCGC	2 cut(s)	841, 1674
BstMAI	GTCTC	3 cut(s)	335, 1290, 1331
BstMWI	GCNNNNNNNGC	2 cut(s)	935, 1194
BstNI	CCWGG	3 cut(s)	639, 1347, 1484
BstPI	GGTNACC	2 cut(s)	131, 882
BstSCI	CCNGG	3 cut(s)	637, 1345, 1482
BstSFI	CTRYAG	1 cut(s)	201
BstSNI	TACGTA	1 cut(s)	458
BstV1I	GCAGC	3 cut(s)	138, 215, 1612
BstV2I	GAAGAC	3 cut(s)	552, 1661, 1769
BstX2I	RGATCY	6 cut(s)	244, 498, 571, 917, 962, 1007
BstXI	CCANNNNNNTGG	1 cut(s)	861
BstYI	RGATCY	6 cut(s)	244, 498, 571, 917, 962, 1007
Bsu36I	CCTNAGG	1 cut(s)	761
BsuRI	GGCC	4 cut(s)	416, 642, 1331, 1573
BtgI	CCRYGG	1 cut(s)	380
BtgZI	GCGATG	1 cut(s)	1062
BtrI	CACGTC	1 cut(s)	1525
BtsCI	GGATG	7 cut(s)	634, 1070, 1161, 1247, 1501, 1534, 1694
BtsI	GCAGTG	1 cut(s)	1595
BtsIMutI	CAGTG	5 cut(s)	750, 1111, 1564, 1595, 1775
Cac8I	GCNNGC	2 cut(s)	77, 1845
CaiI	CAGNNNCTG	2 cut(s)	1597, 1651
CfoI	GCGC	2 cut(s)	841, 1674
Cfr13I	GGNCC	4 cut(s)	193, 281, 1329, 1571
Csp6I	GTAC	5 cut(s)	370, 459, 516, 704, 896
CviAII	CATG	5 cut(s)	119, 275, 935, 1512, 1718
CviQI	GTAC	5 cut(s)	370, 459, 516, 704, 896
DdeI	CTNAG	9 cut(s)	21, 512, 566, 761, 910, 1013, 1414, 1590, 1787
DraIII	CACNNNGTG	1 cut(s)	1445
EaeI	YGGCCR	1 cut(s)	640
Eam1104I	CTCTTC	3 cut(s)	65, 114, 1239
EarI	CTCTTC	3 cut(s)	65, 114, 1239
EciI	GGCGGA	2 cut(s)	602, 1653
Ecl136II	GAGCTC	1 cut(s)	1786
Eco105I	TACGTA	1 cut(s)	458
Eco130I	CCWWGG	1 cut(s)	716
Eco24I	GRGCYC	1 cut(s)	1788
Eco32I	GATATC	1 cut(s)	1507
Eco47I	GGWCC	2 cut(s)	193, 281
Eco53kI	GAGCTC	1 cut(s)	1786
Eco57I	CTGAAG	3 cut(s)	684, 1560, 1673
Eco72I	CACGTG	1 cut(s)	1445
Eco81I	CCTNAGG	1 cut(s)	761
Eco88I	CYCGRG	1 cut(s)	150
Eco91I	GGTNACC	2 cut(s)	131, 882
EcoICRI	GAGCTC	1 cut(s)	1786
EcoO109I	RGGNCCY	2 cut(s)	281, 1571
EcoO65I	GGTNACC	2 cut(s)	131, 882
EcoRI	GAATTC	2 cut(s)	316, 1134
EcoRII	CCWGG	3 cut(s)	637, 1345, 1482
EcoRV	GATATC	1 cut(s)	1507
EcoT14I	CCWWGG	1 cut(s)	716
EcoT22I	ATGCAT	1 cut(s)	940
EcoT38I	GRGCYC	1 cut(s)	1788
ErhI	CCWWGG	1 cut(s)	716
Esp3I	CGTCTC	1 cut(s)	335
FaeI	CATG	5 cut(s)	122, 278, 938, 1515, 1721
FalI	AAGNNNNNCTT	2 cut(s)	1800, 1832
FaqI	GGGAC	2 cut(s)	206, 343
FatI	CATG	5 cut(s)	118, 274, 934, 1511, 1717
FauI	CCCGC	1 cut(s)	123
FauNDI	CATATG	1 cut(s)	952
FbaI	TGATCA	1 cut(s)	1267
Fnu4HI	GCNGC	4 cut(s)	127, 204, 643, 1626
FokI	GGATG	7 cut(s)	621, 1057, 1148, 1234, 1508, 1541, 1681
FriOI	GRGCYC	1 cut(s)	1788
Fsp4HI	GCNGC	4 cut(s)	127, 204, 643, 1626
GlaI	GCGC	2 cut(s)	840, 1673
GluI	GCNGC	4 cut(s)	127, 204, 643, 1626
GsuI	CTGGAG	1 cut(s)	1799
HaeIII	GGCC	4 cut(s)	416, 642, 1331, 1573
HapII	CCGG	2 cut(s)	1332, 1704
HhaI	GCGC	2 cut(s)	841, 1674
Hin1II	CATG	5 cut(s)	122, 278, 938, 1515, 1721
Hin6I	GCGC	2 cut(s)	839, 1672
HinP1I	GCGC	2 cut(s)	839, 1672
HpaII	CCGG	2 cut(s)	1332, 1704
HphI	GGTGA	8 cut(s)	104, 143, 416, 876, 1047, 1334, 1390, 1431
Hpy166II	GTNNAC	1 cut(s)	898
Hpy188III	TCNNGA	9 cut(s)	209, 692, 1143, 1251, 1280, 1293, 1416, 1458, 1704
Hpy8I	GTNNAC	1 cut(s)	898
Hpy99I	CGWCG	1 cut(s)	1526
HpyAV	CCTTC	8 cut(s)	114, 708, 778, 897, 1178, 1369, 1584, 1823
HpyCH4III	ACNGT	2 cut(s)	614, 668
HpyCH4IV	ACGT	4 cut(s)	457, 809, 1444, 1524
HpyCH4V	TGCA	7 cut(s)	79, 146, 203, 797, 938, 1126, 1775
HpyF10VI	GCNNNNNNNGC	2 cut(s)	935, 1194
HpyF3I	CTNAG	9 cut(s)	21, 512, 566, 761, 910, 1013, 1414, 1590, 1787
HpySE526I	ACGT	4 cut(s)	457, 809, 1444, 1524
Hsp92II	CATG	5 cut(s)	122, 278, 938, 1515, 1721
HspAI	GCGC	2 cut(s)	839, 1672
Kpn2I	TCCGGA	1 cut(s)	1703
Ksp22I	TGATCA	1 cut(s)	1267
LguI	GCTCTTC	1 cut(s)	65
LmnI	GCTCC	6 cut(s)	397, 607, 625, 818, 1666, 1783
Lsp1109I	GCAGC	3 cut(s)	138, 215, 1612
LweI	GCATC	7 cut(s)	947, 1079, 1170, 1184, 1612, 1638, 1762
MaeII	ACGT	4 cut(s)	457, 809, 1444, 1524
MflI	RGATCY	6 cut(s)	244, 498, 571, 917, 962, 1007
MhlI	GDGCHC	3 cut(s)	612, 823, 1788
MlyI	GAGTC	3 cut(s)	86, 1292, 1333
MmeI	TCCRAC	4 cut(s)	895, 940, 947, 1429
Mph1103I	ATGCAT	1 cut(s)	940
MroI	TCCGGA	1 cut(s)	1703
MroXI	GAANNNNTTC	1 cut(s)	1138
MseI	TTAA	2 cut(s)	177, 182
MslI	CAYNNNNRTG	2 cut(s)	117, 234
MspA1I	CMGCKG	2 cut(s)	129, 861
MspI	CCGG	2 cut(s)	1332, 1704
MspR9I	CCNGG	3 cut(s)	639, 1347, 1484
MvaI	CCWGG	3 cut(s)	639, 1347, 1484
MwoI	GCNNNNNNNGC	2 cut(s)	935, 1194
NdeI	CATATG	1 cut(s)	952
NlaIII	CATG	5 cut(s)	122, 278, 938, 1515, 1721
NlaIV	GGNNCC	4 cut(s)	194, 246, 393, 1662
NmuCI	GTSAC	8 cut(s)	131, 164, 404, 658, 882, 1378, 1559, 1593
NsiI	ATGCAT	1 cut(s)	940
PaeR7I	CTCGAG	1 cut(s)	150
PciSI	GCTCTTC	1 cut(s)	65
PcsI	WCGNNNNNNNCGW	1 cut(s)	1638
PdmI	GAANNNNTTC	1 cut(s)	1138
PfeI	GAWTC	8 cut(s)	29, 100, 1296, 1357, 1400, 1547, 1679, 1856
PflMI	CCANNNNNTGG	2 cut(s)	833, 1448
PfoI	TCCNGGA	1 cut(s)	1482
PkrI	GCNGC	4 cut(s)	128, 205, 644, 1627
PleI	GAGTC	3 cut(s)	86, 1291, 1333
PmaCI	CACGTG	1 cut(s)	1445
PmlI	CACGTG	1 cut(s)	1445
PpsI	GAGTC	3 cut(s)	86, 1291, 1333
Ppu21I	YACGTR	2 cut(s)	458, 1445
PpuMI	RGGWCCY	1 cut(s)	281
Psp124BI	GAGCTC	1 cut(s)	1788
Psp5II	RGGWCCY	1 cut(s)	281
Psp6I	CCWGG	3 cut(s)	637, 1345, 1482
PspCI	CACGTG	1 cut(s)	1445
PspEI	GGTNACC	2 cut(s)	131, 882
PspGI	CCWGG	3 cut(s)	637, 1345, 1482
PspN4I	GGNNCC	4 cut(s)	194, 246, 393, 1662
PspPI	GGNCC	4 cut(s)	193, 281, 1329, 1571
PspPPI	RGGWCCY	1 cut(s)	281
PspXI	VCTCGAGB	1 cut(s)	150
PstI	CTGCAG	1 cut(s)	205
PstNI	CAGNNNCTG	2 cut(s)	1597, 1651
PsuI	RGATCY	6 cut(s)	244, 498, 571, 917, 962, 1007
PvuII	CAGCTG	1 cut(s)	861
RsaI	GTAC	5 cut(s)	371, 460, 517, 705, 897
RsaNI	GTAC	5 cut(s)	370, 459, 516, 704, 896
RseI	CAYNNNNRTG	2 cut(s)	117, 234
SacI	GAGCTC	1 cut(s)	1788
SapI	GCTCTTC	1 cut(s)	65
SaqAI	TTAA	2 cut(s)	177, 182
SatI	GCNGC	4 cut(s)	127, 204, 643, 1626
Sau96I	GGNCC	4 cut(s)	193, 281, 1329, 1571
SchI	GAGTC	3 cut(s)	86, 1292, 1333
ScrFI	CCNGG	3 cut(s)	639, 1347, 1484
SduI	GDGCHC	3 cut(s)	612, 823, 1788
SfaNI	GCATC	7 cut(s)	947, 1079, 1170, 1184, 1612, 1638, 1762
SfcI	CTRYAG	1 cut(s)	201
Sfr274I	CTCGAG	1 cut(s)	150
SinI	GGWCC	2 cut(s)	193, 281
SlaI	CTCGAG	1 cut(s)	150
SmiMI	CAYNNNNRTG	2 cut(s)	117, 234
SmlI	CTYRAG	4 cut(s)	150, 209, 580, 692
SmoI	CTYRAG	4 cut(s)	150, 209, 580, 692
SnaBI	TACGTA	1 cut(s)	458
SsiI	CCGC	7 cut(s)	116, 129, 196, 587, 643, 1664, 1830
SstI	GAGCTC	1 cut(s)	1788
StyD4I	CCNGG	3 cut(s)	637, 1345, 1482
StyI	CCWWGG	1 cut(s)	716
TaaI	ACNGT	2 cut(s)	614, 668
TaiI	ACGT	4 cut(s)	460, 812, 1447, 1527
TaqI	TCGA	4 cut(s)	151, 1021, 1132, 1521
TatI	WGTACW	2 cut(s)	515, 895
TauI	GCSGC	1 cut(s)	645
TfiI	GAWTC	8 cut(s)	29, 100, 1296, 1357, 1400, 1547, 1679, 1856
Tru1I	TTAA	2 cut(s)	177, 182
Tru9I	TTAA	2 cut(s)	177, 182
TscAI	CASTG	5 cut(s)	757, 1111, 1564, 1602, 1782
TseFI	GTSAC	8 cut(s)	131, 164, 404, 658, 882, 1378, 1559, 1593
TseI	GCWGC	3 cut(s)	126, 203, 1625
Tsp45I	GTSAC	8 cut(s)	131, 164, 404, 658, 882, 1378, 1559, 1593
TspDTI	ATGAA	4 cut(s)	263, 530, 1573, 1820
TspRI	CASTG	5 cut(s)	757, 1111, 1564, 1602, 1782
Van91I	CCANNNNNTGG	2 cut(s)	833, 1448
VpaK11BI	GGWCC	2 cut(s)	193, 281
XapI	RAATTY	6 cut(s)	214, 220, 316, 1134, 1228, 1351
XbaI	TCTAGA	1 cut(s)	1457
XhoI	CTCGAG	1 cut(s)	150
XmnI	GAANNNNTTC	1 cut(s)	1138
Zsp2I	ATGCAT	1 cut(s)	940

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.