Autophagy-related protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G49590 AT3G49590 AT3G49590 |
| fragaria_vesca | FvH4_7g33350 FvH4_7g33350 FvH4_7g33680 |
| malus_domestica | MD01G1231700.v1.1 MD07G1303800.v1.1 |
| prunus_persica | Prupe.2G322400_v2.0.a1 Prupe.2G322400_v2.0.a1 |
| pyrus_communis | pycom01g23960 pycom07g27650 pycom07g27660 |
| rosa_chinensis | RchiOBHm_Chr1g0383331 |
| rosa_laevigata | RLG00000026112 |
| rosa_multiflora | Rmu_sc0007173.1_g000015 |
| rosa_roxburghii | Rroxscaffold_4G00277390 |
| rosa_rugosa | Rorug01G0440500 |
| rosa_samantha | Rh1AG466400 Rh1BG423700 Rh1CG436900 Rh1DG456400 |
| rosa_wichuraiana | Rw1G040610 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 262 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 342 |
| Acc36I | ACCTGC | 1 cut(s) | 262 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 770 |
| AccBSI | CCGCTC | 1 cut(s) | 1152 |
| AccII | CGCG | 2 cut(s) | 1081, 1159 |
| AciI | CCGC | 7 cut(s) | 78, 155, 986, 1079, 1081, 1152, 1159 |
| AclWI | GGATC | 3 cut(s) | 253, 298, 533 |
| AcsI | RAATTY | 1 cut(s) | 462 |
| AcuI | CTGAAG | 2 cut(s) | 12, 882 |
| AcvI | CACGTG | 1 cut(s) | 767 |
| AdeI | CACNNNGTG | 1 cut(s) | 767 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 107, 108, 242, 502, 506, 770, 1026 |
| AflIII | ACRYGT | 1 cut(s) | 766 |
| AgsI | TTSAA | 5 cut(s) | 16, 445, 648, 678, 1005 |
| AjiI | CACGTC | 1 cut(s) | 847 |
| AjnI | CCWGG | 2 cut(s) | 667, 804 |
| AluBI | AGCT | 7 cut(s) | 8, 189, 379, 786, 983, 1108, 1116 |
| AluI | AGCT | 7 cut(s) | 8, 189, 379, 786, 983, 1108, 1116 |
| Alw21I | GWGCWC | 2 cut(s) | 151, 1110 |
| Alw26I | GTCTC | 2 cut(s) | 612, 653 |
| AlwI | GGATC | 3 cut(s) | 253, 298, 533 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 476, 919, 973 |
| Ama87I | CYCGRG | 1 cut(s) | 787 |
| AoxI | GGCC | 4 cut(s) | 209, 508, 651, 893 |
| ApaI | GGGCCC | 1 cut(s) | 512 |
| ApeKI | GCWGC | 1 cut(s) | 947 |
| ApoI | RAATTY | 1 cut(s) | 462 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 466 |
| AspLEI | GCGC | 1 cut(s) | 996 |
| AspS9I | GGNCC | 3 cut(s) | 508, 509, 651 |
| AsuHPI | GGTGA | 6 cut(s) | 375, 405, 561, 656, 712, 753 |
| AsuNHI | GCTAGC | 1 cut(s) | 4 |
| AvaI | CYCGRG | 1 cut(s) | 787 |
| AxyI | CCTNAGG | 1 cut(s) | 89 |
| BaeGI | GKGCMC | 1 cut(s) | 512 |
| BanII | GRGCYC | 2 cut(s) | 512, 1110 |
| BbrPI | CACGTG | 1 cut(s) | 767 |
| BbsI | GAAGAC | 1 cut(s) | 1091 |
| Bbv12I | GWGCWC | 2 cut(s) | 151, 1110 |
| BbvCI | CCTCAGC | 1 cut(s) | 974 |
| BbvI | GCAGC | 1 cut(s) | 934 |
| BccI | CCATC | 5 cut(s) | 166, 406, 418, 619, 878 |
| BceAI | ACGGC | 1 cut(s) | 1074 |
| BciT130I | CCWGG | 2 cut(s) | 669, 806 |
| BclI | TGATCA | 1 cut(s) | 589 |
| BcoDI | GTCTC | 2 cut(s) | 612, 653 |
| BfaI | CTAG | 4 cut(s) | 5, 513, 753, 780 |
| BfmI | CTRYAG | 1 cut(s) | 331 |
| BfuAI | ACCTGC | 1 cut(s) | 262 |
| BisI | GCNGC | 3 cut(s) | 78, 948, 1079 |
| BlsI | GCNGC | 3 cut(s) | 79, 949, 1080 |
| Bme1390I | CCNGG | 2 cut(s) | 669, 806 |
| BmeT110I | CYCGRG | 1 cut(s) | 787 |
| BmgBI | CACGTC | 1 cut(s) | 847 |
| BmgT120I | GGNCC | 3 cut(s) | 508, 509, 651 |
| BmiI | GGNNCC | 2 cut(s) | 509, 510 |
| BmrFI | CCNGG | 2 cut(s) | 669, 806 |
| BmrI | ACTGGG | 1 cut(s) | 1015 |
| BmsI | GCATC | 5 cut(s) | 275, 498, 934, 960, 1084 |
| BmtI | GCTAGC | 1 cut(s) | 8 |
| BmuI | ACTGGG | 1 cut(s) | 1015 |
| BpiI | GAAGAC | 1 cut(s) | 1091 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 967, 999 |
| BpmI | CTGGAG | 1 cut(s) | 1121 |
| Bpu10I | CCTNAGC | 1 cut(s) | 974 |
| BpuEI | CTTGAG | 3 cut(s) | 41, 585, 858 |
| BsaAI | YACGTR | 1 cut(s) | 767 |
| BsaBI | GATNNNNATC | 3 cut(s) | 15, 372, 520 |
| BsaJI | CCNNGG | 3 cut(s) | 44, 667, 1079 |
| BsaWI | WCCGGW | 1 cut(s) | 431 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 107, 108, 242, 502, 506, 770, 1026 |
| Bse1I | ACTGG | 4 cut(s) | 162, 879, 1021, 1104 |
| Bse21I | CCTNAGG | 1 cut(s) | 89 |
| Bse8I | GATNNNNATC | 3 cut(s) | 15, 372, 520 |
| BseBI | CCWGG | 2 cut(s) | 669, 806 |
| BseDI | CCNNGG | 3 cut(s) | 44, 667, 1079 |
| BseGI | GGATG | 9 cut(s) | 158, 398, 489, 646, 814, 823, 856, 1016, 1088 |
| BseJI | GATNNNNATC | 3 cut(s) | 15, 372, 520 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 107, 108, 242, 502, 506, 770, 1026 |
| BseMII | CTCAG | 5 cut(s) | 80, 750, 926, 965, 1123 |
| BseNI | ACTGG | 4 cut(s) | 162, 879, 1021, 1104 |
| BseRI | GAGGAG | 4 cut(s) | 159, 285, 1062, 1118 |
| BseSI | GKGCMC | 1 cut(s) | 512 |
| BseXI | GCAGC | 1 cut(s) | 934 |
| BseYI | CCCAGC | 1 cut(s) | 418 |
| Bsh1236I | CGCG | 2 cut(s) | 1081, 1159 |
| Bsh1285I | CGRYCG | 1 cut(s) | 155 |
| BshFI | GGCC | 4 cut(s) | 211, 510, 653, 895 |
| BsiEI | CGRYCG | 1 cut(s) | 155 |
| BsiHKAI | GWGCWC | 2 cut(s) | 151, 1110 |
| BsiHKCI | CYCGRG | 1 cut(s) | 787 |
| BsiSI | CCGG | 2 cut(s) | 432, 654 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 107, 108, 242, 502, 506, 770, 1026 |
| BsmAI | GTCTC | 2 cut(s) | 612, 653 |
| BsnI | GGCC | 4 cut(s) | 211, 510, 653, 895 |
| BsoBI | CYCGRG | 1 cut(s) | 787 |
| Bsp120I | GGGCCC | 1 cut(s) | 508 |
| Bsp1286I | GDGCHC | 3 cut(s) | 151, 512, 1110 |
| Bsp143I | GATC | 4 cut(s) | 245, 290, 538, 589 |
| BspACI | CCGC | 7 cut(s) | 78, 155, 986, 1079, 1081, 1152, 1159 |
| BspANI | GGCC | 4 cut(s) | 211, 510, 653, 895 |
| BspCNI | CTCAG | 5 cut(s) | 81, 749, 925, 966, 1122 |
| BspFNI | CGCG | 2 cut(s) | 1081, 1159 |
| BspLI | GGNNCC | 2 cut(s) | 509, 510 |
| BspMI | ACCTGC | 1 cut(s) | 262 |
| BspOI | GCTAGC | 1 cut(s) | 8 |
| BspPI | GGATC | 3 cut(s) | 253, 298, 533 |
| BsrBI | CCGCTC | 1 cut(s) | 1152 |
| BsrI | ACTGG | 4 cut(s) | 162, 879, 1021, 1104 |
| BssECI | CCNNGG | 3 cut(s) | 44, 667, 1079 |
| BssMI | GATC | 4 cut(s) | 245, 290, 538, 589 |
| Bst2UI | CCWGG | 2 cut(s) | 669, 806 |
| Bst6I | CTCTTC | 1 cut(s) | 561 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 263 |
| BstBAI | YACGTR | 1 cut(s) | 767 |
| BstC8I | GCNNGC | 2 cut(s) | 6, 1167 |
| BstDEI | CTNAG | 7 cut(s) | 89, 238, 341, 736, 912, 974, 1109 |
| BstDSI | CCRYGG | 1 cut(s) | 1079 |
| BstF5I | GGATG | 9 cut(s) | 158, 398, 489, 646, 814, 823, 856, 1016, 1088 |
| BstFNI | CGCG | 2 cut(s) | 1081, 1159 |
| BstHHI | GCGC | 1 cut(s) | 996 |
| BstKTI | GATC | 4 cut(s) | 248, 293, 541, 592 |
| BstMAI | GTCTC | 2 cut(s) | 612, 653 |
| BstMBI | GATC | 4 cut(s) | 245, 290, 538, 589 |
| BstMCI | CGRYCG | 1 cut(s) | 155 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 186, 263 |
| BstNI | CCWGG | 2 cut(s) | 669, 806 |
| BstSCI | CCNGG | 2 cut(s) | 667, 804 |
| BstSFI | CTRYAG | 1 cut(s) | 331 |
| BstSLI | GKGCMC | 1 cut(s) | 512 |
| BstUI | CGCG | 2 cut(s) | 1081, 1159 |
| BstV1I | GCAGC | 1 cut(s) | 934 |
| BstV2I | GAAGAC | 1 cut(s) | 1091 |
| BstX2I | RGATCY | 2 cut(s) | 245, 290 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 189 |
| BstYI | RGATCY | 2 cut(s) | 245, 290 |
| Bsu36I | CCTNAGG | 1 cut(s) | 89 |
| BsuRI | GGCC | 4 cut(s) | 211, 510, 653, 895 |
| BtgI | CCRYGG | 1 cut(s) | 1079 |
| BtrI | CACGTC | 1 cut(s) | 847 |
| BtsCI | GGATG | 9 cut(s) | 158, 398, 489, 646, 814, 823, 856, 1016, 1088 |
| BtsI | GCAGTG | 1 cut(s) | 917 |
| BtsIMutI | CAGTG | 4 cut(s) | 169, 886, 917, 1097 |
| BveI | ACCTGC | 1 cut(s) | 262 |
| Cac8I | GCNNGC | 2 cut(s) | 6, 1167 |
| CaiI | CAGNNNCTG | 3 cut(s) | 476, 919, 973 |
| CfoI | GCGC | 1 cut(s) | 996 |
| Cfr13I | GGNCC | 3 cut(s) | 508, 509, 651 |
| Cfr42I | CCGCGG | 1 cut(s) | 1082 |
| CviAII | CATG | 3 cut(s) | 281, 834, 1040 |
| DdeI | CTNAG | 7 cut(s) | 89, 238, 341, 736, 912, 974, 1109 |
| DpnI | GATC | 4 cut(s) | 247, 292, 540, 591 |
| DpnII | GATC | 4 cut(s) | 245, 290, 538, 589 |
| DraIII | CACNNNGTG | 1 cut(s) | 767 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 342 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 342 |
| Eam1104I | CTCTTC | 1 cut(s) | 561 |
| EarI | CTCTTC | 1 cut(s) | 561 |
| EciI | GGCGGA | 1 cut(s) | 975 |
| Ecl136II | GAGCTC | 1 cut(s) | 1108 |
| Eco147I | AGGCCT | 1 cut(s) | 895 |
| Eco24I | GRGCYC | 2 cut(s) | 512, 1110 |
| Eco53kI | GAGCTC | 1 cut(s) | 1108 |
| Eco57I | CTGAAG | 2 cut(s) | 12, 882 |
| Eco72I | CACGTG | 1 cut(s) | 767 |
| Eco81I | CCTNAGG | 1 cut(s) | 89 |
| Eco88I | CYCGRG | 1 cut(s) | 787 |
| EcoICRI | GAGCTC | 1 cut(s) | 1108 |
| EcoO109I | RGGNCCY | 2 cut(s) | 508, 509 |
| EcoRI | GAATTC | 1 cut(s) | 462 |
| EcoRII | CCWGG | 2 cut(s) | 667, 804 |
| EcoT38I | GRGCYC | 2 cut(s) | 512, 1110 |
| FaeI | CATG | 3 cut(s) | 284, 837, 1043 |
| FatI | CATG | 3 cut(s) | 280, 833, 1039 |
| FauI | CCCGC | 1 cut(s) | 1152 |
| FbaI | TGATCA | 1 cut(s) | 589 |
| Fnu4HI | GCNGC | 3 cut(s) | 78, 948, 1079 |
| FokI | GGATG | 9 cut(s) | 145, 385, 476, 653, 821, 830, 863, 1003, 1075 |
| FriOI | GRGCYC | 2 cut(s) | 512, 1110 |
| Fsp4HI | GCNGC | 3 cut(s) | 78, 948, 1079 |
| FspBI | CTAG | 4 cut(s) | 5, 513, 753, 780 |
| GlaI | GCGC | 1 cut(s) | 995 |
| GluI | GCNGC | 3 cut(s) | 78, 948, 1079 |
| GsaI | CCCAGC | 1 cut(s) | 422 |
| GsuI | CTGGAG | 1 cut(s) | 1121 |
| HaeIII | GGCC | 4 cut(s) | 211, 510, 653, 895 |
| HapII | CCGG | 2 cut(s) | 432, 654 |
| HhaI | GCGC | 1 cut(s) | 996 |
| Hin1II | CATG | 3 cut(s) | 284, 837, 1043 |
| Hin6I | GCGC | 1 cut(s) | 994 |
| HinP1I | GCGC | 1 cut(s) | 994 |
| HinfI | GANTC | 7 cut(s) | 605, 618, 661, 722, 869, 1001, 1178 |
| HpaII | CCGG | 2 cut(s) | 432, 654 |
| HphI | GGTGA | 6 cut(s) | 375, 405, 561, 656, 712, 753 |
| Hpy188I | TCNGA | 8 cut(s) | 367, 538, 632, 696, 901, 969, 1093, 1112 |
| Hpy188III | TCNNGA | 7 cut(s) | 20, 141, 471, 602, 615, 738, 780 |
| Hpy99I | CGWCG | 1 cut(s) | 409 |
| HpyAV | CCTTC | 6 cut(s) | 36, 106, 506, 691, 906, 1145 |
| HpyCH4IV | ACGT | 2 cut(s) | 766, 846 |
| HpyCH4V | TGCA | 5 cut(s) | 125, 257, 266, 454, 1097 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 186, 263 |
| HpyF3I | CTNAG | 7 cut(s) | 89, 238, 341, 736, 912, 974, 1109 |
| HpySE526I | ACGT | 2 cut(s) | 766, 846 |
| Hsp92II | CATG | 3 cut(s) | 284, 837, 1043 |
| HspAI | GCGC | 1 cut(s) | 994 |
| Ksp22I | TGATCA | 1 cut(s) | 589 |
| KspI | CCGCGG | 1 cut(s) | 1082 |
| Kzo9I | GATC | 4 cut(s) | 245, 290, 538, 589 |
| LmnI | GCTCC | 3 cut(s) | 146, 988, 1105 |
| Lsp1109I | GCAGC | 1 cut(s) | 934 |
| LweI | GCATC | 5 cut(s) | 275, 498, 934, 960, 1084 |
| MaeI | CTAG | 4 cut(s) | 5, 513, 753, 780 |
| MaeII | ACGT | 2 cut(s) | 766, 846 |
| MaeIII | GTNAC | 3 cut(s) | 276, 915, 1010 |
| MalI | GATC | 4 cut(s) | 247, 292, 540, 591 |
| MbiI | CCGCTC | 1 cut(s) | 1152 |
| MboI | GATC | 4 cut(s) | 245, 290, 538, 589 |
| MboII | GAAGA | 3 cut(s) | 548, 1042, 1096 |
| MflI | RGATCY | 2 cut(s) | 245, 290 |
| MhlI | GDGCHC | 3 cut(s) | 151, 512, 1110 |
| MluCI | AATT | 4 cut(s) | 51, 439, 462, 529 |
| MlyI | GAGTC | 2 cut(s) | 614, 655 |
| MmeI | TCCRAC | 4 cut(s) | 223, 268, 618, 751 |
| MroXI | GAANNNNTTC | 1 cut(s) | 466 |
| MspA1I | CMGCKG | 3 cut(s) | 80, 189, 1081 |
| MspI | CCGG | 2 cut(s) | 432, 654 |
| MspR9I | CCNGG | 2 cut(s) | 669, 806 |
| MvaI | CCWGG | 2 cut(s) | 669, 806 |
| MvnI | CGCG | 2 cut(s) | 1081, 1159 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 186, 263 |
| NdeII | GATC | 4 cut(s) | 245, 290, 538, 589 |
| NheI | GCTAGC | 1 cut(s) | 4 |
| NlaIII | CATG | 3 cut(s) | 284, 837, 1043 |
| NlaIV | GGNNCC | 2 cut(s) | 509, 510 |
| NmuCI | GTSAC | 2 cut(s) | 276, 915 |
| PaeR7I | CTCGAG | 1 cut(s) | 787 |
| PaqCI | CACCTGC | 1 cut(s) | 262 |
| PceI | AGGCCT | 1 cut(s) | 895 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 401 |
| PdmI | GAANNNNTTC | 1 cut(s) | 466 |
| PfeI | GAWTC | 5 cut(s) | 618, 722, 869, 1001, 1178 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 770 |
| PfoI | TCCNGGA | 1 cut(s) | 804 |
| PkrI | GCNGC | 3 cut(s) | 79, 949, 1080 |
| PleI | GAGTC | 2 cut(s) | 613, 655 |
| PmaCI | CACGTG | 1 cut(s) | 767 |
| PmlI | CACGTG | 1 cut(s) | 767 |
| PpsI | GAGTC | 2 cut(s) | 613, 655 |
| Ppu21I | YACGTR | 1 cut(s) | 767 |
| Psp124BI | GAGCTC | 1 cut(s) | 1110 |
| Psp6I | CCWGG | 2 cut(s) | 667, 804 |
| PspCI | CACGTG | 1 cut(s) | 767 |
| PspFI | CCCAGC | 1 cut(s) | 418 |
| PspGI | CCWGG | 2 cut(s) | 667, 804 |
| PspN4I | GGNNCC | 2 cut(s) | 509, 510 |
| PspOMI | GGGCCC | 1 cut(s) | 508 |
| PspPI | GGNCC | 3 cut(s) | 508, 509, 651 |
| PspXI | VCTCGAGB | 1 cut(s) | 787 |
| PstNI | CAGNNNCTG | 3 cut(s) | 476, 919, 973 |
| PsuI | RGATCY | 2 cut(s) | 245, 290 |
| PvuII | CAGCTG | 1 cut(s) | 189 |
| SacI | GAGCTC | 1 cut(s) | 1110 |
| SacII | CCGCGG | 1 cut(s) | 1082 |
| SatI | GCNGC | 3 cut(s) | 78, 948, 1079 |
| Sau3AI | GATC | 4 cut(s) | 245, 290, 538, 589 |
| Sau96I | GGNCC | 3 cut(s) | 508, 509, 651 |
| SchI | GAGTC | 2 cut(s) | 614, 655 |
| ScrFI | CCNGG | 2 cut(s) | 669, 806 |
| SduI | GDGCHC | 3 cut(s) | 151, 512, 1110 |
| SfaNI | GCATC | 5 cut(s) | 275, 498, 934, 960, 1084 |
| SfcI | CTRYAG | 1 cut(s) | 331 |
| Sfr274I | CTCGAG | 1 cut(s) | 787 |
| Sfr303I | CCGCGG | 1 cut(s) | 1082 |
| SgrBI | CCGCGG | 1 cut(s) | 1082 |
| SlaI | CTCGAG | 1 cut(s) | 787 |
| SmlI | CTYRAG | 4 cut(s) | 20, 600, 787, 873 |
| SmoI | CTYRAG | 4 cut(s) | 20, 600, 787, 873 |
| Sse9I | AATT | 4 cut(s) | 51, 439, 462, 529 |
| SseBI | AGGCCT | 1 cut(s) | 895 |
| SsiI | CCGC | 7 cut(s) | 78, 155, 986, 1079, 1081, 1152, 1159 |
| SspMI | CTAG | 4 cut(s) | 5, 513, 753, 780 |
| SstI | GAGCTC | 1 cut(s) | 1110 |
| StuI | AGGCCT | 1 cut(s) | 895 |
| StyD4I | CCNGG | 2 cut(s) | 667, 804 |
| TaiI | ACGT | 2 cut(s) | 769, 849 |
| TaqI | TCGA | 3 cut(s) | 140, 460, 788 |
| TasI | AATT | 4 cut(s) | 51, 439, 462, 529 |
| TauI | GCSGC | 2 cut(s) | 80, 1081 |
| TfiI | GAWTC | 5 cut(s) | 618, 722, 869, 1001, 1178 |
| TscAI | CASTG | 4 cut(s) | 169, 886, 924, 1104 |
| TseFI | GTSAC | 2 cut(s) | 276, 915 |
| TseI | GCWGC | 1 cut(s) | 947 |
| Tsp45I | GTSAC | 2 cut(s) | 276, 915 |
| TspDTI | ATGAA | 3 cut(s) | 719, 895, 1142 |
| TspGWI | ACGGA | 1 cut(s) | 828 |
| TspRI | CASTG | 4 cut(s) | 169, 886, 924, 1104 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 770 |
| XapI | RAATTY | 1 cut(s) | 462 |
| XbaI | TCTAGA | 1 cut(s) | 779 |
| XhoI | CTCGAG | 1 cut(s) | 787 |
| XmnI | GAANNNNTTC | 1 cut(s) | 466 |
| XspI | CTAG | 4 cut(s) | 5, 513, 753, 780 |