pycom07g27660

Autophagy-related protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
27294180 .. 27296633
2454 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g27660.3

Sequence Viewer

Length: 1185 bp
ATGCTAGCTGATTTCAATCTTGAGCCTTCAGCACCAATGCCACCGAGGATAATTACTGATTATGTTGGTAGTCCTGCCGCTGACCCCCTGAGGTCTTTCCCCTCATCAGGGAAGGGTTTTAGTGCAACTTCCTTTCTGTCGAGAGGAGCACGACCGCCATCCAGTGTGCCACACCAACGCCCACACAGCTGGACAAGTGGCTTCCACAGGCCACCTCCTTTTATTCACAATAGACCCTTAGTTGGATCTCCACCTGCATATCGTGCATCTCCTATGTCACATGATGTTGGATCTCCTCCTATTGATACATTTGCCAACAGAGGTCAAAACTATAGACCTCTAAGTCATAAAAGAAATATGAGTTCAGATGAGTATCAGCTTTCACCTCCATTTTCGCCATCCCCGTCGCCATCACCCCCAGCATACTTGTCCGGTGGTAATTTCAATCCTATGCAAACTCGAATTCGTTCAGGAACTGCCCCTGTAAGCATCCCCCTTCCAATGGGGGGCCCTAGATACTTATCCCCCAATTTTTCTGATCCAAGTAGAAATCCTCTTCCTCCTTTATCACCCAGAAGCACAAGAAATGATCATTCCTCTCAAGAGTCTCCATCTGGAATCAGGGCAATCAGAAAGTTGGATGTTTCAAGGGCCGGAGAGACTCACCCTGGAAGTTCAAATCATTACATTGGTCAGAAGGTGATGAAAGACAGCAAAGATGATTCAGGGCGTTTCTCAGGATTGTTGTCATCTAGTGGCTCACCACGTGTTGGATTTTCTAGAAGCTCGAGTAGATTGTCTTTCCAGGATGATTTGGATGATTTTGAGTTCTCATGTCCGTTTGACGTGGATGATGTTGATACACCAGATTCTCAAGCCAGTGATGGCAAAAGGCCTTCAGAGTTCATATCTCAGTCACTGCCAATGGGTAGAAAATCACAAGATGCTGCTGTCGGCGTTCTGGTTCAGATGCTGAGGACAGCTCCGCCTCTGCGCCAAGATTCAAGTTGTTACTCATCCCAGTCTGGGAAGAATGAGCATGAGGGAGGAGTTGCTACGGCTTCTGGTTTCTTTATGCCGCGGAAGACATCCGATGCACTGGAGGAGCTCAGAAGCTACCGAGATATGAAAGACCTTCTACTCTCCAAGAGCGGAACGCGGGTGCTTGCCAAAGACGAATCATAA

Protein Analysis

395

Amino Acids

42.73

Weight (kDa)

9.29

Isoelectric Point (pI)

72.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 262
AasI GACNNNNNNGTC 1 cut(s) 342
Acc36I ACCTGC 1 cut(s) 262
AccB7I CCANNNNNTGG 1 cut(s) 770
AccBSI CCGCTC 1 cut(s) 1152
AccII CGCG 2 cut(s) 1081, 1159
AciI CCGC 7 cut(s) 78, 155, 986, 1079, 1081, 1152, 1159
AclWI GGATC 3 cut(s) 253, 298, 533
AcsI RAATTY 1 cut(s) 462
AcuI CTGAAG 2 cut(s) 12, 882
AcvI CACGTG 1 cut(s) 767
AdeI CACNNNGTG 1 cut(s) 767
AfiI CCNNNNNNNGG 7 cut(s) 107, 108, 242, 502, 506, 770, 1026
AflIII ACRYGT 1 cut(s) 766
AgsI TTSAA 5 cut(s) 16, 445, 648, 678, 1005
AjiI CACGTC 1 cut(s) 847
AjnI CCWGG 2 cut(s) 667, 804
AluBI AGCT 7 cut(s) 8, 189, 379, 786, 983, 1108, 1116
AluI AGCT 7 cut(s) 8, 189, 379, 786, 983, 1108, 1116
Alw21I GWGCWC 2 cut(s) 151, 1110
Alw26I GTCTC 2 cut(s) 612, 653
AlwI GGATC 3 cut(s) 253, 298, 533
AlwNI CAGNNNCTG 3 cut(s) 476, 919, 973
Ama87I CYCGRG 1 cut(s) 787
AoxI GGCC 4 cut(s) 209, 508, 651, 893
ApaI GGGCCC 1 cut(s) 512
ApeKI GCWGC 1 cut(s) 947
ApoI RAATTY 1 cut(s) 462
Asp700I GAANNNNTTC 1 cut(s) 466
AspLEI GCGC 1 cut(s) 996
AspS9I GGNCC 3 cut(s) 508, 509, 651
AsuHPI GGTGA 6 cut(s) 375, 405, 561, 656, 712, 753
AsuNHI GCTAGC 1 cut(s) 4
AvaI CYCGRG 1 cut(s) 787
AxyI CCTNAGG 1 cut(s) 89
BaeGI GKGCMC 1 cut(s) 512
BanII GRGCYC 2 cut(s) 512, 1110
BbrPI CACGTG 1 cut(s) 767
BbsI GAAGAC 1 cut(s) 1091
Bbv12I GWGCWC 2 cut(s) 151, 1110
BbvCI CCTCAGC 1 cut(s) 974
BbvI GCAGC 1 cut(s) 934
BccI CCATC 5 cut(s) 166, 406, 418, 619, 878
BceAI ACGGC 1 cut(s) 1074
BciT130I CCWGG 2 cut(s) 669, 806
BclI TGATCA 1 cut(s) 589
BcoDI GTCTC 2 cut(s) 612, 653
BfaI CTAG 4 cut(s) 5, 513, 753, 780
BfmI CTRYAG 1 cut(s) 331
BfuAI ACCTGC 1 cut(s) 262
BisI GCNGC 3 cut(s) 78, 948, 1079
BlsI GCNGC 3 cut(s) 79, 949, 1080
Bme1390I CCNGG 2 cut(s) 669, 806
BmeT110I CYCGRG 1 cut(s) 787
BmgBI CACGTC 1 cut(s) 847
BmgT120I GGNCC 3 cut(s) 508, 509, 651
BmiI GGNNCC 2 cut(s) 509, 510
BmrFI CCNGG 2 cut(s) 669, 806
BmrI ACTGGG 1 cut(s) 1015
BmsI GCATC 5 cut(s) 275, 498, 934, 960, 1084
BmtI GCTAGC 1 cut(s) 8
BmuI ACTGGG 1 cut(s) 1015
BpiI GAAGAC 1 cut(s) 1091
BplI GAGNNNNNCTC 2 cut(s) 967, 999
BpmI CTGGAG 1 cut(s) 1121
Bpu10I CCTNAGC 1 cut(s) 974
BpuEI CTTGAG 3 cut(s) 41, 585, 858
BsaAI YACGTR 1 cut(s) 767
BsaBI GATNNNNATC 3 cut(s) 15, 372, 520
BsaJI CCNNGG 3 cut(s) 44, 667, 1079
BsaWI WCCGGW 1 cut(s) 431
Bsc4I CCNNNNNNNGG 7 cut(s) 107, 108, 242, 502, 506, 770, 1026
Bse1I ACTGG 4 cut(s) 162, 879, 1021, 1104
Bse21I CCTNAGG 1 cut(s) 89
Bse8I GATNNNNATC 3 cut(s) 15, 372, 520
BseBI CCWGG 2 cut(s) 669, 806
BseDI CCNNGG 3 cut(s) 44, 667, 1079
BseGI GGATG 9 cut(s) 158, 398, 489, 646, 814, 823, 856, 1016, 1088
BseJI GATNNNNATC 3 cut(s) 15, 372, 520
BseLI CCNNNNNNNGG 7 cut(s) 107, 108, 242, 502, 506, 770, 1026
BseMII CTCAG 5 cut(s) 80, 750, 926, 965, 1123
BseNI ACTGG 4 cut(s) 162, 879, 1021, 1104
BseRI GAGGAG 4 cut(s) 159, 285, 1062, 1118
BseSI GKGCMC 1 cut(s) 512
BseXI GCAGC 1 cut(s) 934
BseYI CCCAGC 1 cut(s) 418
Bsh1236I CGCG 2 cut(s) 1081, 1159
Bsh1285I CGRYCG 1 cut(s) 155
BshFI GGCC 4 cut(s) 211, 510, 653, 895
BsiEI CGRYCG 1 cut(s) 155
BsiHKAI GWGCWC 2 cut(s) 151, 1110
BsiHKCI CYCGRG 1 cut(s) 787
BsiSI CCGG 2 cut(s) 432, 654
BslI CCNNNNNNNGG 7 cut(s) 107, 108, 242, 502, 506, 770, 1026
BsmAI GTCTC 2 cut(s) 612, 653
BsnI GGCC 4 cut(s) 211, 510, 653, 895
BsoBI CYCGRG 1 cut(s) 787
Bsp120I GGGCCC 1 cut(s) 508
Bsp1286I GDGCHC 3 cut(s) 151, 512, 1110
Bsp143I GATC 4 cut(s) 245, 290, 538, 589
BspACI CCGC 7 cut(s) 78, 155, 986, 1079, 1081, 1152, 1159
BspANI GGCC 4 cut(s) 211, 510, 653, 895
BspCNI CTCAG 5 cut(s) 81, 749, 925, 966, 1122
BspFNI CGCG 2 cut(s) 1081, 1159
BspLI GGNNCC 2 cut(s) 509, 510
BspMI ACCTGC 1 cut(s) 262
BspOI GCTAGC 1 cut(s) 8
BspPI GGATC 3 cut(s) 253, 298, 533
BsrBI CCGCTC 1 cut(s) 1152
BsrI ACTGG 4 cut(s) 162, 879, 1021, 1104
BssECI CCNNGG 3 cut(s) 44, 667, 1079
BssMI GATC 4 cut(s) 245, 290, 538, 589
Bst2UI CCWGG 2 cut(s) 669, 806
Bst6I CTCTTC 1 cut(s) 561
BstAPI GCANNNNNTGC 1 cut(s) 263
BstBAI YACGTR 1 cut(s) 767
BstC8I GCNNGC 2 cut(s) 6, 1167
BstDEI CTNAG 7 cut(s) 89, 238, 341, 736, 912, 974, 1109
BstDSI CCRYGG 1 cut(s) 1079
BstF5I GGATG 9 cut(s) 158, 398, 489, 646, 814, 823, 856, 1016, 1088
BstFNI CGCG 2 cut(s) 1081, 1159
BstHHI GCGC 1 cut(s) 996
BstKTI GATC 4 cut(s) 248, 293, 541, 592
BstMAI GTCTC 2 cut(s) 612, 653
BstMBI GATC 4 cut(s) 245, 290, 538, 589
BstMCI CGRYCG 1 cut(s) 155
BstMWI GCNNNNNNNGC 2 cut(s) 186, 263
BstNI CCWGG 2 cut(s) 669, 806
BstSCI CCNGG 2 cut(s) 667, 804
BstSFI CTRYAG 1 cut(s) 331
BstSLI GKGCMC 1 cut(s) 512
BstUI CGCG 2 cut(s) 1081, 1159
BstV1I GCAGC 1 cut(s) 934
BstV2I GAAGAC 1 cut(s) 1091
BstX2I RGATCY 2 cut(s) 245, 290
BstXI CCANNNNNNTGG 1 cut(s) 189
BstYI RGATCY 2 cut(s) 245, 290
Bsu36I CCTNAGG 1 cut(s) 89
BsuRI GGCC 4 cut(s) 211, 510, 653, 895
BtgI CCRYGG 1 cut(s) 1079
BtrI CACGTC 1 cut(s) 847
BtsCI GGATG 9 cut(s) 158, 398, 489, 646, 814, 823, 856, 1016, 1088
BtsI GCAGTG 1 cut(s) 917
BtsIMutI CAGTG 4 cut(s) 169, 886, 917, 1097
BveI ACCTGC 1 cut(s) 262
Cac8I GCNNGC 2 cut(s) 6, 1167
CaiI CAGNNNCTG 3 cut(s) 476, 919, 973
CfoI GCGC 1 cut(s) 996
Cfr13I GGNCC 3 cut(s) 508, 509, 651
Cfr42I CCGCGG 1 cut(s) 1082
CviAII CATG 3 cut(s) 281, 834, 1040
DdeI CTNAG 7 cut(s) 89, 238, 341, 736, 912, 974, 1109
DpnI GATC 4 cut(s) 247, 292, 540, 591
DpnII GATC 4 cut(s) 245, 290, 538, 589
DraIII CACNNNGTG 1 cut(s) 767
DrdI GACNNNNNNGTC 1 cut(s) 342
DseDI GACNNNNNNGTC 1 cut(s) 342
Eam1104I CTCTTC 1 cut(s) 561
EarI CTCTTC 1 cut(s) 561
EciI GGCGGA 1 cut(s) 975
Ecl136II GAGCTC 1 cut(s) 1108
Eco147I AGGCCT 1 cut(s) 895
Eco24I GRGCYC 2 cut(s) 512, 1110
Eco53kI GAGCTC 1 cut(s) 1108
Eco57I CTGAAG 2 cut(s) 12, 882
Eco72I CACGTG 1 cut(s) 767
Eco81I CCTNAGG 1 cut(s) 89
Eco88I CYCGRG 1 cut(s) 787
EcoICRI GAGCTC 1 cut(s) 1108
EcoO109I RGGNCCY 2 cut(s) 508, 509
EcoRI GAATTC 1 cut(s) 462
EcoRII CCWGG 2 cut(s) 667, 804
EcoT38I GRGCYC 2 cut(s) 512, 1110
FaeI CATG 3 cut(s) 284, 837, 1043
FatI CATG 3 cut(s) 280, 833, 1039
FauI CCCGC 1 cut(s) 1152
FbaI TGATCA 1 cut(s) 589
Fnu4HI GCNGC 3 cut(s) 78, 948, 1079
FokI GGATG 9 cut(s) 145, 385, 476, 653, 821, 830, 863, 1003, 1075
FriOI GRGCYC 2 cut(s) 512, 1110
Fsp4HI GCNGC 3 cut(s) 78, 948, 1079
FspBI CTAG 4 cut(s) 5, 513, 753, 780
GlaI GCGC 1 cut(s) 995
GluI GCNGC 3 cut(s) 78, 948, 1079
GsaI CCCAGC 1 cut(s) 422
GsuI CTGGAG 1 cut(s) 1121
HaeIII GGCC 4 cut(s) 211, 510, 653, 895
HapII CCGG 2 cut(s) 432, 654
HhaI GCGC 1 cut(s) 996
Hin1II CATG 3 cut(s) 284, 837, 1043
Hin6I GCGC 1 cut(s) 994
HinP1I GCGC 1 cut(s) 994
HinfI GANTC 7 cut(s) 605, 618, 661, 722, 869, 1001, 1178
HpaII CCGG 2 cut(s) 432, 654
HphI GGTGA 6 cut(s) 375, 405, 561, 656, 712, 753
Hpy188I TCNGA 8 cut(s) 367, 538, 632, 696, 901, 969, 1093, 1112
Hpy188III TCNNGA 7 cut(s) 20, 141, 471, 602, 615, 738, 780
Hpy99I CGWCG 1 cut(s) 409
HpyAV CCTTC 6 cut(s) 36, 106, 506, 691, 906, 1145
HpyCH4IV ACGT 2 cut(s) 766, 846
HpyCH4V TGCA 5 cut(s) 125, 257, 266, 454, 1097
HpyF10VI GCNNNNNNNGC 2 cut(s) 186, 263
HpyF3I CTNAG 7 cut(s) 89, 238, 341, 736, 912, 974, 1109
HpySE526I ACGT 2 cut(s) 766, 846
Hsp92II CATG 3 cut(s) 284, 837, 1043
HspAI GCGC 1 cut(s) 994
Ksp22I TGATCA 1 cut(s) 589
KspI CCGCGG 1 cut(s) 1082
Kzo9I GATC 4 cut(s) 245, 290, 538, 589
LmnI GCTCC 3 cut(s) 146, 988, 1105
Lsp1109I GCAGC 1 cut(s) 934
LweI GCATC 5 cut(s) 275, 498, 934, 960, 1084
MaeI CTAG 4 cut(s) 5, 513, 753, 780
MaeII ACGT 2 cut(s) 766, 846
MaeIII GTNAC 3 cut(s) 276, 915, 1010
MalI GATC 4 cut(s) 247, 292, 540, 591
MbiI CCGCTC 1 cut(s) 1152
MboI GATC 4 cut(s) 245, 290, 538, 589
MboII GAAGA 3 cut(s) 548, 1042, 1096
MflI RGATCY 2 cut(s) 245, 290
MhlI GDGCHC 3 cut(s) 151, 512, 1110
MluCI AATT 4 cut(s) 51, 439, 462, 529
MlyI GAGTC 2 cut(s) 614, 655
MmeI TCCRAC 4 cut(s) 223, 268, 618, 751
MroXI GAANNNNTTC 1 cut(s) 466
MspA1I CMGCKG 3 cut(s) 80, 189, 1081
MspI CCGG 2 cut(s) 432, 654
MspR9I CCNGG 2 cut(s) 669, 806
MvaI CCWGG 2 cut(s) 669, 806
MvnI CGCG 2 cut(s) 1081, 1159
MwoI GCNNNNNNNGC 2 cut(s) 186, 263
NdeII GATC 4 cut(s) 245, 290, 538, 589
NheI GCTAGC 1 cut(s) 4
NlaIII CATG 3 cut(s) 284, 837, 1043
NlaIV GGNNCC 2 cut(s) 509, 510
NmuCI GTSAC 2 cut(s) 276, 915
PaeR7I CTCGAG 1 cut(s) 787
PaqCI CACCTGC 1 cut(s) 262
PceI AGGCCT 1 cut(s) 895
PcsI WCGNNNNNNNCGW 1 cut(s) 401
PdmI GAANNNNTTC 1 cut(s) 466
PfeI GAWTC 5 cut(s) 618, 722, 869, 1001, 1178
PflMI CCANNNNNTGG 1 cut(s) 770
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 3 cut(s) 79, 949, 1080
PleI GAGTC 2 cut(s) 613, 655
PmaCI CACGTG 1 cut(s) 767
PmlI CACGTG 1 cut(s) 767
PpsI GAGTC 2 cut(s) 613, 655
Ppu21I YACGTR 1 cut(s) 767
Psp124BI GAGCTC 1 cut(s) 1110
Psp6I CCWGG 2 cut(s) 667, 804
PspCI CACGTG 1 cut(s) 767
PspFI CCCAGC 1 cut(s) 418
PspGI CCWGG 2 cut(s) 667, 804
PspN4I GGNNCC 2 cut(s) 509, 510
PspOMI GGGCCC 1 cut(s) 508
PspPI GGNCC 3 cut(s) 508, 509, 651
PspXI VCTCGAGB 1 cut(s) 787
PstNI CAGNNNCTG 3 cut(s) 476, 919, 973
PsuI RGATCY 2 cut(s) 245, 290
PvuII CAGCTG 1 cut(s) 189
SacI GAGCTC 1 cut(s) 1110
SacII CCGCGG 1 cut(s) 1082
SatI GCNGC 3 cut(s) 78, 948, 1079
Sau3AI GATC 4 cut(s) 245, 290, 538, 589
Sau96I GGNCC 3 cut(s) 508, 509, 651
SchI GAGTC 2 cut(s) 614, 655
ScrFI CCNGG 2 cut(s) 669, 806
SduI GDGCHC 3 cut(s) 151, 512, 1110
SfaNI GCATC 5 cut(s) 275, 498, 934, 960, 1084
SfcI CTRYAG 1 cut(s) 331
Sfr274I CTCGAG 1 cut(s) 787
Sfr303I CCGCGG 1 cut(s) 1082
SgrBI CCGCGG 1 cut(s) 1082
SlaI CTCGAG 1 cut(s) 787
SmlI CTYRAG 4 cut(s) 20, 600, 787, 873
SmoI CTYRAG 4 cut(s) 20, 600, 787, 873
Sse9I AATT 4 cut(s) 51, 439, 462, 529
SseBI AGGCCT 1 cut(s) 895
SsiI CCGC 7 cut(s) 78, 155, 986, 1079, 1081, 1152, 1159
SspMI CTAG 4 cut(s) 5, 513, 753, 780
SstI GAGCTC 1 cut(s) 1110
StuI AGGCCT 1 cut(s) 895
StyD4I CCNGG 2 cut(s) 667, 804
TaiI ACGT 2 cut(s) 769, 849
TaqI TCGA 3 cut(s) 140, 460, 788
TasI AATT 4 cut(s) 51, 439, 462, 529
TauI GCSGC 2 cut(s) 80, 1081
TfiI GAWTC 5 cut(s) 618, 722, 869, 1001, 1178
TscAI CASTG 4 cut(s) 169, 886, 924, 1104
TseFI GTSAC 2 cut(s) 276, 915
TseI GCWGC 1 cut(s) 947
Tsp45I GTSAC 2 cut(s) 276, 915
TspDTI ATGAA 3 cut(s) 719, 895, 1142
TspGWI ACGGA 1 cut(s) 828
TspRI CASTG 4 cut(s) 169, 886, 924, 1104
Van91I CCANNNNNTGG 1 cut(s) 770
XapI RAATTY 1 cut(s) 462
XbaI TCTAGA 1 cut(s) 779
XhoI CTCGAG 1 cut(s) 787
XmnI GAANNNNTTC 1 cut(s) 466
XspI CTAG 4 cut(s) 5, 513, 753, 780
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.