MD00G1031700.v1.1

Serrate RNA effector

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr00
OG0010205
Physical Location & Seq
Reverse (-)
5522631 .. 5530405
7775 bp
Loading structure...
UTR
Exon/CDS
Intron
MD00G1031700.v1.1.491

Sequence Viewer

Length: 2250 bp
ATGGCCGAGATCATTAACATGCCTGTCGAGTCCTTGGACCGCCGTCGTGATCGCAAAGAGAAGTCCTCCGATGACCCCCAATCCCCGCCGCAAGAAGCACCAGCTCCACCCCCACCAGCTGCACCATCGCGAAGACGCGACAGGGACGAAAGGGACAGAGGCAGAGACGATAGGGACCTCGACCGCCCTCTCAGTCGCCGCCCCGATTACTACGATCGAAATCGCTCACCTCCGCCTCCTGCTATTCGAGAGAGAGATAGAGAGAGGGACTATAAGCGCCGGAGCAGCCTCAGTCCTCCACCCCCGTTTAGGGACCGAAGACACTCCCCACCGCGGAGGTCTCCACCCCCTCCGTTCAAGCGGTCTAGGAGGGAAGATGGAGGGTATGATGGCAGGAGAGGGAGCCCCAGAGGAGGGTTTGGACCTGGGGATAGGAGGTTTGGATATGATTATCCAAGTGGATATGATCGTGAGATGGGGGGTAGAGCTGGTTATGGTGACGAAAGACCTCATGGTCGGTATGTTGGACGCCCATCTGGTGGCTATGGTCCTGGTGACTGGGATTCAGGAAGGGGTGGTTTTGGTGATGCTTCCAACACTGGGACTACTCAAAGAGAAGGGTTGATGTCATACAAACAATTCATTCAGGAGCTTGAAGATGACATTCTTCCATCTGAAGCTGAGCGCAGATATCAAGAATACAAGACAGAGTATATATCTACCCAGAAGCGAGCTTATTTTAATGCTCATAAAGATGAGGACTGGCTGAAAGACAAATATCATCCCACAAATCTGCTGACTGTTATCGAAAGGAGGAACGAACTTGCACGAAAAGTAGCAAAAGATTTTCTGCTTGATCTACAAAGTGGGACCTTGGACTTAGGCCCAGGTGTCAATCCTGCAGCTCCAAATAAGCCAGGACACAATAGTGAACCAAATTCTGAAGATGAAACTGACGTGGGTGACAAGCGGAGACGGTCTGGCAGGGAACCAAATAAAGATAATGATCTTCTTTCAGTTGCTCCTAAGGCTCACCCAGTCAGTTCTGAGCCCAGACGTATACAAGTAGACATTGAACAAGCGCAGGCCCTTGTTCGCAAGCTTGACTCTGAAAAAGGAATTGTGGAAAACATTTTATATGGACCTGATAATGACAAAAATAGAGAAAAATTGCATGGTGGCTCCAGTGGCCCTGTTATTATAATACGGGGTTTGACATCTGTAAAGGGCTTGGAGGGCATTGAGCTACTAGACACTCTTAATACTTATCTCTGGCGCATCCATGGTTTAGATTATTATGGAATGAGTGAATCAAACGAAGCAAAGGGTCTACGGCATGTGAGAGCAGTGGGGAAGAGTTCCGATCTGACTAGTAATGGAAATGAGTGGGAAAAGAAGTTAGACTTGTGTTGGAAAGAAAGGTTGCAGAGTCAAGATCCTTTGGAAATAAGGACTGCTAGGGAAAAGATAGATACTACTGCTTCTGAGTCCTTGGATCCCTATGTTCGCAAGATTAGGGATGAAAAGTATGGCTGGAAGTATGGTTGTGGAGCCAAGGGCTGCACGAAGCTCTTTCATGCTTCTGAATTTGTGCACAAACATCTGAAATTGAAACACCCTGAACTTGTGATGGAGGTGACTTCCAAACTGCGCGAGGAGCTGTATTTTCAGAATTATATGAATGATGTGGATGCACCTGGTGGAACTCCTATTATGCAGCAACCTGTACTGAGGGACAAACCCCAGAGGCGTAGGCCTTTAGAGAATAGATTGAAAGACGAACGGGGTAATCGTAGAGAACGAGAAAATCGAGTCAATGGTGAAAGATTTGATAGGTCTGATAACATGCAATCAAGTGAGTTCCAGCCCAATAATGATGGTCCAGATGGAGGAAATCCTGATGACCCGATGTTTGAAAATTTTGGTGGGCAAGGAATGCGCGTTGGTCCTCCTTTCCCATCAGATATACCGCCACCACCTGTATTGATGCCTGTGCCTGGTGCTGGTCCGTTAGGACCTTTTGTTCCTGCTCCCCCTGAAGTTGCAATGCAGATGTTGCGAGATCAAGGTGGTCCTCCACCTTTTGAAGGCAGTGGTAGAAATGTGTGGCCTGGACCCCAAATGAGTGGGCCAGCCCCAATTCTTGCTTTATCACCAGCTTTTCGACAGGATCCTCGACGTTTAAGAAGTTATCAAGATCTAGATGCCCCAGAAGATGAAGTGACGGTGATAGACTACAGGAGCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000381 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0005846 GO:0006139 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010445 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034518 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048024 GO:0048367 GO:0048509 GO:0048519 GO:0048731 GO:0048856 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1903311 GO:1903506 GO:2000011 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARS2 DUF3546

Protein Analysis

750

Amino Acids

84.97

Weight (kDa)

8.11

Isoelectric Point (pI)

71.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SERRATE_Ars2_N PF12066 212 - 293 1.4e-21 SERRATE/Ars2, N-terminal domain
ARS2 PF04959 448 - 654 2e-40 Arsenite-resistance protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1202
AasI GACNNNNNNGTC 1 cut(s) 513
AccB7I CCANNNNNTGG 1 cut(s) 539
AccI GTMKAC 3 cut(s) 1060, 1068, 1330
AccII CGCG 5 cut(s) 130, 138, 334, 1653, 1941
AclWI GGATC 5 cut(s) 1430, 1490, 1503, 2165, 2178
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 937, 1586, 1918
AcuI CTGAAG 3 cut(s) 696, 963, 2058
AcyI GRCGYC 1 cut(s) 529
AdeI CACNNNGTG 1 cut(s) 1700
AfaI GTAC 1 cut(s) 1728
AgsI TTSAA 7 cut(s) 358, 656, 1076, 1612, 1774, 1916, 2087
AhlI ACTAGT 1 cut(s) 1370
AjiI CACGTC 1 cut(s) 958
AjnI CCWGG 7 cut(s) 424, 550, 886, 916, 1696, 1996, 2110
AleI CACNNNNGTG 1 cut(s) 927
AloI GAACNNNNNNTCC 2 cut(s) 2007, 2039
Alw21I GWGCWC 1 cut(s) 1596
Alw26I GTCTC 3 cut(s) 159, 345, 967
Alw44I GTGCAC 1 cut(s) 1592
AlwI GGATC 5 cut(s) 1430, 1490, 1503, 2165, 2178
AoxI GGCC 7 cut(s) 3, 883, 1086, 1189, 1754, 2108, 2129
ApaLI GTGCAC 1 cut(s) 1592
ApeKI GCWGC 5 cut(s) 119, 285, 902, 1560, 1717
ApoI RAATTY 3 cut(s) 937, 1586, 1918
ArsI GACNNNNNNTTYG 2 cut(s) 1895, 1927
AspLEI GCGC 6 cut(s) 279, 687, 1084, 1278, 1653, 1941
AxyI CCTNAGG 1 cut(s) 1026
BaeGI GKGCMC 1 cut(s) 1596
BamHI GGATCC 2 cut(s) 1495, 2170
BanII GRGCYC 2 cut(s) 407, 1053
BbsI GAAGAC 2 cut(s) 139, 325
Bbv12I GWGCWC 1 cut(s) 1596
BbvI GCAGC 5 cut(s) 106, 297, 914, 1547, 1729
BceAI ACGGC 2 cut(s) 27, 1349
BciT130I CCWGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
BcoDI GTCTC 3 cut(s) 159, 345, 967
BcuI ACTAGT 1 cut(s) 1370
BfaI CTAG 5 cut(s) 366, 1250, 1371, 1458, 2201
BfmI CTRYAG 2 cut(s) 900, 2236
BfoI RGCGCY 1 cut(s) 280
BglII AGATCT 1 cut(s) 2197
BisI GCNGC 7 cut(s) 89, 120, 199, 286, 903, 1561, 1718
BlpI GCTNAGC 1 cut(s) 681
BlsI GCNGC 7 cut(s) 90, 121, 200, 287, 904, 1562, 1719
Bme1390I CCNGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
BmgBI CACGTC 1 cut(s) 958
BmrFI CCNGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
BmrI ACTGGG 3 cut(s) 568, 609, 1031
BmsI GCATC 5 cut(s) 577, 1287, 1681, 1977, 2194
BmuI ACTGGG 3 cut(s) 568, 609, 1031
BoxI GACNNNNGTC 1 cut(s) 42
BpiI GAAGAC 2 cut(s) 139, 325
BplI GAGNNNNNCTC 2 cut(s) 50, 82
BpmI CTGGAG 1 cut(s) 1168
Bpu1102I GCTNAGC 1 cut(s) 681
BsaBI GATNNNNATC 2 cut(s) 219, 1005
BsaHI GRCGYC 1 cut(s) 529
BsaI GGTCTC 1 cut(s) 345
BsaJI CCNNGG 8 cut(s) 33, 332, 425, 873, 886, 1282, 1491, 1554
Bse1I ACTGG 5 cut(s) 563, 604, 767, 1037, 1185
Bse21I CCTNAGG 1 cut(s) 1026
Bse3DI GCAATG 1 cut(s) 2052
Bse8I GATNNNNATC 2 cut(s) 219, 1005
BseBI CCWGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
BseDI CCNNGG 8 cut(s) 33, 332, 425, 873, 886, 1282, 1491, 1554
BseGI GGATG 4 cut(s) 781, 1278, 1525, 1696
BseJI GATNNNNATC 2 cut(s) 219, 1005
BseMI GCAATG 1 cut(s) 2052
BseMII CTCAG 6 cut(s) 205, 304, 672, 1038, 1476, 1721
BseNI ACTGG 5 cut(s) 563, 604, 767, 1037, 1185
BseRI GAGGAG 2 cut(s) 426, 1670
BseSI GKGCMC 1 cut(s) 1596
BseXI GCAGC 5 cut(s) 106, 297, 914, 1547, 1729
BsgI GTGCAG 2 cut(s) 105, 1546
Bsh1236I CGCG 5 cut(s) 130, 138, 334, 1653, 1941
Bsh1285I CGRYCG 2 cut(s) 184, 217
BshFI GGCC 7 cut(s) 5, 885, 1088, 1191, 1756, 2110, 2131
BsiEI CGRYCG 2 cut(s) 184, 217
BsiHKAI GWGCWC 1 cut(s) 1596
BsiSI CCGG 1 cut(s) 280
BslFI GGGAC 8 cut(s) 158, 167, 188, 281, 326, 616, 883, 1748
BsmAI GTCTC 3 cut(s) 159, 345, 967
BsmBI CGTCTC 2 cut(s) 159, 967
BsmFI GGGAC 8 cut(s) 158, 167, 188, 281, 326, 616, 883, 1748
BsmI GAATGC 1 cut(s) 1941
BsnI GGCC 7 cut(s) 5, 885, 1088, 1191, 1756, 2110, 2131
Bso31I GGTCTC 1 cut(s) 345
Bsp1286I GDGCHC 3 cut(s) 407, 1053, 1596
Bsp1720I GCTNAGC 1 cut(s) 681
Bsp19I CCATGG 1 cut(s) 1282
Bsp68I TCGCGA 1 cut(s) 130
BspANI GGCC 7 cut(s) 5, 885, 1088, 1191, 1756, 2110, 2131
BspCNI CTCAG 6 cut(s) 204, 303, 673, 1039, 1477, 1722
BspFNI CGCG 5 cut(s) 130, 138, 334, 1653, 1941
BspMAI CTGCAG 1 cut(s) 904
BspPI GGATC 5 cut(s) 1430, 1490, 1503, 2165, 2178
BspTNI GGTCTC 1 cut(s) 345
BsrDI GCAATG 1 cut(s) 2052
BsrI ACTGG 5 cut(s) 563, 604, 767, 1037, 1185
BssECI CCNNGG 8 cut(s) 33, 332, 425, 873, 886, 1282, 1491, 1554
BssNAI GTATAC 1 cut(s) 1061
BssNI GRCGYC 1 cut(s) 529
BssT1I CCWWGG 5 cut(s) 33, 873, 1282, 1491, 1554
Bst1107I GTATAC 1 cut(s) 1061
Bst2UI CCWGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
Bst4CI ACNGT 3 cut(s) 802, 978, 2227
Bst6I CTCTTC 1 cut(s) 1349
BstACI GRCGYC 1 cut(s) 529
BstAPI GCANNNNNTGC 2 cut(s) 1936, 2056
BstC8I GCNNGC 4 cut(s) 732, 1086, 1100, 2133
BstDEI CTNAG 8 cut(s) 191, 290, 681, 880, 1026, 1047, 1485, 1730
BstDSI CCRYGG 2 cut(s) 332, 1282
BstENI CCTNNNNNAGG 1 cut(s) 2085
BstF5I GGATG 4 cut(s) 781, 1278, 1525, 1696
BstFNI CGCG 5 cut(s) 130, 138, 334, 1653, 1941
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 6 cut(s) 279, 687, 1084, 1278, 1653, 1941
BstMAI GTCTC 3 cut(s) 159, 345, 967
BstMCI CGRYCG 2 cut(s) 184, 217
BstMWI GCNNNNNNNGC 7 cut(s) 285, 1028, 1188, 1236, 1657, 1936, 2056
BstNI CCWGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
BstNSI RCATGY 3 cut(s) 22, 1340, 1849
BstPAI GACNNNNGTC 1 cut(s) 42
BstSCI CCNGG 7 cut(s) 424, 550, 886, 916, 1696, 1996, 2110
BstSFI CTRYAG 2 cut(s) 900, 2236
BstSLI GKGCMC 1 cut(s) 1596
BstUI CGCG 5 cut(s) 130, 138, 334, 1653, 1941
BstV1I GCAGC 5 cut(s) 106, 297, 914, 1547, 1729
BstV2I GAAGAC 2 cut(s) 139, 325
BstX2I RGATCY 4 cut(s) 1435, 1495, 2170, 2197
BstXI CCANNNNNNTGG 1 cut(s) 2126
BstYI RGATCY 4 cut(s) 1435, 1495, 2170, 2197
BstZ17I GTATAC 1 cut(s) 1061
Bsu36I CCTNAGG 1 cut(s) 1026
BsuRI GGCC 7 cut(s) 5, 885, 1088, 1191, 1756, 2110, 2131
BtgI CCRYGG 2 cut(s) 332, 1282
BtgZI GCGATG 1 cut(s) 111
BtrI CACGTC 1 cut(s) 958
BtsCI GGATG 4 cut(s) 781, 1278, 1525, 1696
BtsI GCAGTG 2 cut(s) 1353, 2098
BtsIMutI CAGTG 4 cut(s) 597, 1192, 1353, 2098
BtuMI TCGCGA 1 cut(s) 130
Cac8I GCNNGC 4 cut(s) 732, 1086, 1100, 2133
CfoI GCGC 6 cut(s) 279, 687, 1084, 1278, 1653, 1941
Cfr42I CCGCGG 1 cut(s) 335
CseI GACGC 2 cut(s) 144, 537
CsiI ACCWGGT 1 cut(s) 1696
Csp6I GTAC 1 cut(s) 1727
CspCI CAANNNNNGTGG 2 cut(s) 1965, 2000
CviAII CATG 7 cut(s) 19, 512, 1175, 1283, 1337, 1577, 1846
CviQI GTAC 1 cut(s) 1727
DdeI CTNAG 8 cut(s) 191, 290, 681, 880, 1026, 1047, 1485, 1730
DraIII CACNNNGTG 1 cut(s) 1700
DrdI GACNNNNNNGTC 1 cut(s) 513
DseDI GACNNNNNNGTC 1 cut(s) 513
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1349
EarI CTCTTC 1 cut(s) 1349
EciI GGCGGA 1 cut(s) 222
Eco130I CCWWGG 5 cut(s) 33, 873, 1282, 1491, 1554
Eco147I AGGCCT 1 cut(s) 1756
Eco24I GRGCYC 2 cut(s) 407, 1053
Eco31I GGTCTC 1 cut(s) 345
Eco32I GATATC 1 cut(s) 692
Eco57I CTGAAG 3 cut(s) 696, 963, 2058
Eco81I CCTNAGG 1 cut(s) 1026
EcoNI CCTNNNNNAGG 1 cut(s) 2085
EcoO109I RGGNCCY 4 cut(s) 175, 870, 1087, 2015
EcoRII CCWGG 7 cut(s) 424, 550, 886, 916, 1696, 1996, 2110
EcoRV GATATC 1 cut(s) 692
EcoT14I CCWWGG 5 cut(s) 33, 873, 1282, 1491, 1554
EcoT38I GRGCYC 2 cut(s) 407, 1053
ErhI CCWWGG 5 cut(s) 33, 873, 1282, 1491, 1554
Esp3I CGTCTC 2 cut(s) 159, 967
FaeI CATG 7 cut(s) 22, 515, 1178, 1286, 1340, 1580, 1849
FalI AAGNNNNNCTT 2 cut(s) 1388, 1420
FaqI GGGAC 8 cut(s) 158, 167, 188, 281, 326, 616, 883, 1748
FatI CATG 7 cut(s) 18, 511, 1174, 1282, 1336, 1576, 1845
FauI CCCGC 1 cut(s) 93
FblI GTMKAC 3 cut(s) 1060, 1068, 1330
Fnu4HI GCNGC 7 cut(s) 89, 120, 199, 286, 903, 1561, 1718
FokI GGATG 4 cut(s) 768, 1265, 1532, 1703
FriOI GRGCYC 2 cut(s) 407, 1053
Fsp4HI GCNGC 7 cut(s) 89, 120, 199, 286, 903, 1561, 1718
FspBI CTAG 5 cut(s) 366, 1250, 1371, 1458, 2201
GlaI GCGC 6 cut(s) 278, 686, 1083, 1277, 1652, 1940
GluI GCNGC 7 cut(s) 89, 120, 199, 286, 903, 1561, 1718
GsuI CTGGAG 1 cut(s) 1168
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 7 cut(s) 5, 885, 1088, 1191, 1756, 2110, 2131
HapII CCGG 1 cut(s) 280
HgaI GACGC 2 cut(s) 144, 537
HhaI GCGC 6 cut(s) 279, 687, 1084, 1278, 1653, 1941
Hin1I GRCGYC 1 cut(s) 529
Hin1II CATG 7 cut(s) 22, 515, 1178, 1286, 1340, 1580, 1849
Hin6I GCGC 6 cut(s) 277, 685, 1082, 1276, 1651, 1939
HinP1I GCGC 6 cut(s) 277, 685, 1082, 1276, 1651, 1939
HindIII AAGCTT 1 cut(s) 1100
HinfI GANTC 7 cut(s) 29, 563, 1106, 1310, 1429, 1487, 1812
HpaII CCGG 1 cut(s) 280
Hpy166II GTNNAC 5 cut(s) 932, 1061, 1069, 1331, 1594
Hpy8I GTNNAC 5 cut(s) 932, 1061, 1069, 1331, 1594
Hpy99I CGWCG 2 cut(s) 48, 2181
HpyAV CCTTC 3 cut(s) 564, 611, 2081
HpyCH4III ACNGT 3 cut(s) 802, 978, 2227
HpyCH4IV ACGT 3 cut(s) 957, 1057, 2179
HpyF10VI GCNNNNNNNGC 7 cut(s) 285, 1028, 1188, 1236, 1657, 1936, 2056
HpyF3I CTNAG 8 cut(s) 191, 290, 681, 880, 1026, 1047, 1485, 1730
HpySE526I ACGT 3 cut(s) 957, 1057, 2179
Hsp92I GRCGYC 1 cut(s) 529
Hsp92II CATG 7 cut(s) 22, 515, 1178, 1286, 1340, 1580, 1849
HspAI GCGC 6 cut(s) 277, 685, 1082, 1276, 1651, 1939
KspI CCGCGG 1 cut(s) 335
Lsp1109I GCAGC 5 cut(s) 106, 297, 914, 1547, 1729
LweI GCATC 5 cut(s) 577, 1287, 1681, 1977, 2194
MabI ACCWGGT 1 cut(s) 1696
MaeI CTAG 5 cut(s) 366, 1250, 1371, 1458, 2201
MaeII ACGT 3 cut(s) 957, 1057, 2179
MaeIII GTNAC 5 cut(s) 497, 554, 962, 1636, 2221
MboII GAAGA 9 cut(s) 144, 330, 386, 659, 668, 956, 1001, 1366, 2225
MflI RGATCY 4 cut(s) 1435, 1495, 2170, 2197
MhlI GDGCHC 3 cut(s) 407, 1053, 1596
MluCI AATT 9 cut(s) 638, 937, 1119, 1169, 1586, 1607, 1672, 1918, 2139
MlyI GAGTC 5 cut(s) 38, 1100, 1438, 1496, 1821
MmeI TCCRAC 3 cut(s) 505, 618, 1391
MseI TTAA 4 cut(s) 15, 741, 1260, 2183
MslI CAYNNNNRTG 3 cut(s) 17, 753, 927
MspA1I CMGCKG 2 cut(s) 119, 334
MspI CCGG 1 cut(s) 280
MspR9I CCNGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
Mva1269I GAATGC 1 cut(s) 1941
MvaI CCWGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
MvnI CGCG 5 cut(s) 130, 138, 334, 1653, 1941
MwoI GCNNNNNNNGC 7 cut(s) 285, 1028, 1188, 1236, 1657, 1936, 2056
NcoI CCATGG 1 cut(s) 1282
NlaIII CATG 7 cut(s) 22, 515, 1178, 1286, 1340, 1580, 1849
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 5 cut(s) 497, 554, 962, 1636, 2221
NruI TCGCGA 1 cut(s) 130
NspI RCATGY 3 cut(s) 22, 1340, 1849
OliI CACNNNNGTG 1 cut(s) 927
PceI AGGCCT 1 cut(s) 1756
PcsI WCGNNNNNNNCGW 3 cut(s) 1789, 1798, 1807
PctI GAATGC 1 cut(s) 1941
PfeI GAWTC 2 cut(s) 563, 1310
PflMI CCANNNNNTGG 1 cut(s) 539
PkrI GCNGC 7 cut(s) 90, 121, 200, 287, 904, 1562, 1719
Ple19I CGATCG 1 cut(s) 217
PleI GAGTC 5 cut(s) 37, 1100, 1437, 1495, 1820
PpsI GAGTC 5 cut(s) 37, 1100, 1437, 1495, 1820
PpuMI RGGWCCY 3 cut(s) 175, 870, 2015
PshAI GACNNNNGTC 1 cut(s) 42
PsiI TTATAA 1 cut(s) 1202
Psp5II RGGWCCY 3 cut(s) 175, 870, 2015
Psp6I CCWGG 7 cut(s) 424, 550, 886, 916, 1696, 1996, 2110
PspGI CCWGG 7 cut(s) 424, 550, 886, 916, 1696, 1996, 2110
PspPPI RGGWCCY 3 cut(s) 175, 870, 2015
PstI CTGCAG 1 cut(s) 904
PsuI RGATCY 4 cut(s) 1435, 1495, 2170, 2197
PvuI CGATCG 1 cut(s) 217
PvuII CAGCTG 1 cut(s) 119
RruI TCGCGA 1 cut(s) 130
RsaI GTAC 1 cut(s) 1728
RsaNI GTAC 1 cut(s) 1727
RseI CAYNNNNRTG 3 cut(s) 17, 753, 927
SacII CCGCGG 1 cut(s) 335
SaqAI TTAA 4 cut(s) 15, 741, 1260, 2183
SatI GCNGC 7 cut(s) 89, 120, 199, 286, 903, 1561, 1718
SchI GAGTC 5 cut(s) 38, 1100, 1438, 1496, 1821
ScrFI CCNGG 7 cut(s) 426, 552, 888, 918, 1698, 1998, 2112
SduI GDGCHC 3 cut(s) 407, 1053, 1596
SexAI ACCWGGT 1 cut(s) 1696
SfaNI GCATC 5 cut(s) 577, 1287, 1681, 1977, 2194
SfcI CTRYAG 2 cut(s) 900, 2236
Sfr303I CCGCGG 1 cut(s) 335
SgrBI CCGCGG 1 cut(s) 335
SmiMI CAYNNNNRTG 3 cut(s) 17, 753, 927
SpeI ACTAGT 1 cut(s) 1370
Sse9I AATT 9 cut(s) 638, 937, 1119, 1169, 1586, 1607, 1672, 1918, 2139
SseBI AGGCCT 1 cut(s) 1756
SspMI CTAG 5 cut(s) 366, 1250, 1371, 1458, 2201
StuI AGGCCT 1 cut(s) 1756
StyD4I CCNGG 7 cut(s) 424, 550, 886, 916, 1696, 1996, 2110
StyI CCWWGG 5 cut(s) 33, 873, 1282, 1491, 1554
TaaI ACNGT 3 cut(s) 802, 978, 2227
TaiI ACGT 3 cut(s) 960, 1060, 2182
TaqI TCGA 8 cut(s) 27, 180, 217, 247, 807, 1810, 2164, 2176
TaqII GACCGA 1 cut(s) 330
TasI AATT 9 cut(s) 638, 937, 1119, 1169, 1586, 1607, 1672, 1918, 2139
TatI WGTACW 1 cut(s) 1726
TauI GCSGC 2 cut(s) 91, 201
TfiI GAWTC 2 cut(s) 563, 1310
Tru1I TTAA 4 cut(s) 15, 741, 1260, 2183
Tru9I TTAA 4 cut(s) 15, 741, 1260, 2183
TscAI CASTG 4 cut(s) 604, 1192, 1353, 2098
TseFI GTSAC 5 cut(s) 497, 554, 962, 1636, 2221
TseI GCWGC 5 cut(s) 119, 285, 902, 1560, 1717
Tsp45I GTSAC 5 cut(s) 497, 554, 962, 1636, 2221
TspDTI ATGAA 6 cut(s) 631, 963, 1536, 1565, 1694, 2232
TspGWI ACGGA 2 cut(s) 342, 1998
TspRI CASTG 4 cut(s) 604, 1192, 1353, 2098
Van91I CCANNNNNTGG 1 cut(s) 539
VneI GTGCAC 1 cut(s) 1592
XagI CCTNNNNNAGG 1 cut(s) 2085
XapI RAATTY 3 cut(s) 937, 1586, 1918
XbaI TCTAGA 1 cut(s) 2200
XceI RCATGY 3 cut(s) 22, 1340, 1849
XmiI GTMKAC 3 cut(s) 1060, 1068, 1330
XspI CTAG 5 cut(s) 366, 1250, 1371, 1458, 2201
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.