Prupe.6G153800_v2.0.a1

Serrate RNA effector

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp06
OG0010205
Physical Location & Seq
Forward (+)
13385276 .. 13395041
9766 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.6G153800.1

Sequence Viewer

Length: 2253 bp
ATGGCCGAGATCATGAACATGCCGGTCGAGTCCTTGGACCGCCGTCGCGACCGCAAAGAGAAGTCCTCCGAAGACCCCCAATCGTCGCCGCAGCAAGAAGCACCGCCTCCGCCCCCGCCCCCTCCACCCACGCGAAGGCGCGACAGGGACGAAGGTCGAGACGATAGGGACCTCGACCGCCCTCCGAGTCGCCGGCCTGACTACTACGATCGAAATCGTTCTCCTCCGCCTCCGCCTATTCGAGAGAGGGAGAGAGATAGAGAGAGGGGCTATAAGCGCCGGAGCAGCCTCAGTCCTCCTCCTCCGTACAGGGACCGAAGGCACTCGCCAACTCGGAGGTCTCCACCGCCGCCGTTCAAGAGGTCCAGGAGGGAAGATGGAGGGTATGAGGGCAGGAGAGGGAGTCCCAGAGGAGGGTTTGGTCCTGGGGATAGGAGGTTTGGATATGATTATACTGGATATGACCGTGAGATGGGGGGTAGACCTGGTTATGCTGACGAAAGACCTCATGGTCGGTATGCTGGACGGTCATCTGGTGGCTATGGTCCTCCTGACTGGGATTCAGGACGTGGTGGTTTTGGTGATGCTTCCAGCACTGGGACTACCCAAAGAGAAGGGTTAATGTCATACAAACAGTTCATTCAGGAGCTTGAAGACGACATTCTGCCAGCTGAAGCTGAGCGCAGATATCAAGAATACAGGACGGAGTATATTACTACTCAGAAACGAGCTTATTTTAATGCGCATAAAGATGAGGACTGGCTCAAAGACAAATATCATCCCACAAATCTACTCACTGTCATTGAAAGGAGGAATGAACATGCACGAAAAGTAGCAAAAGATTTCCTGCTTGAACTGCAAAGTGGGACCTTGGACTTAGGCCCAGGTGTCAATTCTGTGGCTCCAAATAAATCAGGACATACTAGTGAACCAAATTCTGATGATGAAGCTGACGTGGGTGGCAAGCGGAGAAGGCATGTCAGGGAACCAAATAAAGAAAATGATCTTCTTTCAGCTGCTCCTAAGGCTCACCCAGTCAGTTCTGAGCCCAGACGTATACAAGTTGACATTGAACAAGCCCAGGCCCTTGTTCGCAAACTTGACTCTGAAAAAGGAATTGTGGAAAACATTTTAGCTGGACCTGATAATGACAAAAATAGAGAAAAATTGCATGGTGGCTCCACTGGCCCTGTTATTATTGTACGGGGTTTGACATCTGTCAAGGGCCTGGAGGGCATTGAGCTACTAGACACCCTTATTACTTATCTTTGGCGTATCCATGGTTTAGATTATTATGGAATGAGTGAGTCAAACGAAGCTAAGGGTCTCCGGCATGTAAGAGCAGAGGGGAAGAGTTCCGACATAATAAGTAATGGAGCTGAGTGGGAAAAGAAAATGGACTTGCGTTGGCAAGAAAGGTTGCAGAGTCAAGATCCCTTGGAAATAATGACTGCTAAGGAAAAGATAGATGCCACTGCTTCTGAGTCCTTAGATCCTTATGTTCGGAAGATCAGGGATGAAAAGTATGGCTGGAAGTATGGTTGTGGAGCCAAGGGTTGCACAAAGCTCTTTCATGCTGCTGAATTTGTGCACAAACATCTTAAACTGAAACACCCTGAACTCGTGATTGAGGTGACTTCCAAACTGCGGGAGGAGCTGTATTTCCAGAATTATATGAATGATGCAGATGCACCAGGTGGAACTCCTATTATGCAGCAACCTGTACTGAGGGAAAAACCACAGAGACGTAGGCCAGGTGTAGAGAATAGATTGAAAGACGAACGTGGTAATCGTAGAGAACGAGAAAATCGAGTCAATGGTGGTGAGAGATATGATAGGTCTGATAACATGCAATCAAGTGAATTTCAGTCCAACAATGATGGTCCAGAAGGAGGAAATCTCGACGAACCAATGTTTGATAATTTTGGTGGACAAGGAGTACGTGTTGGTCCTCCTTTTCCGTCAGATATACCCCCACCACCTGTATTGATGCCTGTGCCTGGTGCTGGTCCACTAGGACCTTTTGTTCCTGCTCCACCTGAAGTTGCAATGCAAATGTTGCGAGAACAAGGTGGTCCTCCACCTTTTGAAGGCAGTGGTAGAAATGTGTGGTCTGGACCCCAAATGAGTGGGCCAGCCCCAATTCTTGCTTTGTCTCCAGCTTTTCGACAGGATCCTCGTCGTTTAAGAAGTTATCAAGATCTAGATGCCCCAGAAGATGAAGTCACAGTGATAGACTACAGGAGCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000381 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0005846 GO:0006139 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010445 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034518 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048024 GO:0048367 GO:0048509 GO:0048519 GO:0048731 GO:0048856 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1903311 GO:1903506 GO:2000011 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARS2 DUF3546

Protein Analysis

751

Amino Acids

84.97

Weight (kDa)

7.74

Isoelectric Point (pI)

74.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 510
Acc16I TGCGCA 1 cut(s) 744
AccI GTMKAC 2 cut(s) 481, 1057
AccII CGCG 3 cut(s) 48, 133, 141
AclWI GGATC 4 cut(s) 1427, 1487, 2168, 2181
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 3 cut(s) 934, 1583, 1862
AcuI CTGAAG 2 cut(s) 693, 2061
AdeI CACNNNGTG 1 cut(s) 1697
AfaI GTAC 4 cut(s) 308, 1203, 1725, 1941
AflIII ACRYGT 1 cut(s) 1942
AgsI TTSAA 7 cut(s) 358, 653, 806, 854, 1073, 1774, 2090
AhlI ACTAGT 1 cut(s) 923
AjiI CACGTC 2 cut(s) 569, 955
AjnI CCWGG 9 cut(s) 365, 424, 484, 883, 1080, 1227, 1693, 1753, 1999
AloI GAACNNNNNNTCC 2 cut(s) 2010, 2042
Alw21I GWGCWC 1 cut(s) 1593
Alw26I GTCTC 5 cut(s) 153, 345, 1331, 1738, 2160
Alw44I GTGCAC 1 cut(s) 1589
AlwI GGATC 4 cut(s) 1427, 1487, 2168, 2181
AoxI GGCC 8 cut(s) 3, 194, 880, 1083, 1186, 1225, 1751, 2132
ApaLI GTGCAC 1 cut(s) 1589
ApeKI GCWGC 5 cut(s) 91, 285, 1016, 1577, 1714
ApoI RAATTY 3 cut(s) 934, 1583, 1862
Asp700I GAANNNNTTC 1 cut(s) 217
AspLEI GCGC 4 cut(s) 141, 279, 684, 745
AsuHPI GGTGA 4 cut(s) 593, 1022, 1645, 1835
AxyI CCTNAGG 1 cut(s) 1023
BaeGI GKGCMC 1 cut(s) 1593
BamHI GGATCC 1 cut(s) 2173
BanII GRGCYC 1 cut(s) 1050
BauI CACGAG 1 cut(s) 1622
BbsI GAAGAC 2 cut(s) 78, 660
Bbv12I GWGCWC 1 cut(s) 1593
BbvI GCAGC 5 cut(s) 103, 297, 1003, 1564, 1726
BccI CCATC 3 cut(s) 371, 466, 1874
BceAI ACGGC 2 cut(s) 27, 337
BciT130I CCWGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
BciVI GTATCC 1 cut(s) 1286
BcoDI GTCTC 5 cut(s) 153, 345, 1331, 1738, 2160
BcuI ACTAGT 1 cut(s) 923
BfaI CTAG 4 cut(s) 924, 1247, 2015, 2204
BfmI CTRYAG 1 cut(s) 2239
BfoI RGCGCY 1 cut(s) 280
BfuI GTATCC 1 cut(s) 1286
BglI GCCNNNNNGGC 1 cut(s) 1233
BglII AGATCT 1 cut(s) 2200
BisI GCNGC 7 cut(s) 89, 92, 286, 350, 1017, 1578, 1715
BlpI GCTNAGC 1 cut(s) 678
BlsI GCNGC 7 cut(s) 90, 93, 287, 351, 1018, 1579, 1716
Bme1390I CCNGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
BmgBI CACGTC 2 cut(s) 569, 955
BmiI GGNNCC 9 cut(s) 170, 314, 868, 903, 987, 1180, 1549, 2119, 2175
BmrFI CCNGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
BmrI ACTGGG 3 cut(s) 565, 606, 1028
BmsI GCATC 6 cut(s) 574, 1459, 1672, 1678, 1980, 2197
BmuI ACTGGG 3 cut(s) 565, 606, 1028
BoxI GACNNNNGTC 3 cut(s) 42, 153, 1217
BpiI GAAGAC 2 cut(s) 78, 660
BplI GAGNNNNNCTC 4 cut(s) 50, 82, 1884, 1916
BpmI CTGGAG 2 cut(s) 1250, 2142
Bpu10I CCTNAGC 2 cut(s) 1320, 1455
Bpu1102I GCTNAGC 1 cut(s) 678
BsaAI YACGTR 1 cut(s) 1943
BsaBI GATNNNNATC 1 cut(s) 213
BsaI GGTCTC 2 cut(s) 345, 1331
BsaJI CCNNGG 8 cut(s) 33, 425, 870, 883, 1080, 1279, 1437, 1551
BsaXI ACNNNNNCTCC 6 cut(s) 388, 418, 1643, 1673, 1929, 1959
Bse118I RCCGGY 2 cut(s) 22, 192
Bse1I ACTGG 6 cut(s) 460, 560, 601, 764, 1034, 1189
Bse21I CCTNAGG 1 cut(s) 1023
Bse3DI GCAATG 1 cut(s) 2055
Bse8I GATNNNNATC 1 cut(s) 213
BseBI CCWGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
BseDI CCNNGG 8 cut(s) 33, 425, 870, 883, 1080, 1279, 1437, 1551
BseGI GGATG 2 cut(s) 778, 1522
BseJI GATNNNNATC 1 cut(s) 213
BseMI GCAATG 1 cut(s) 2055
BseMII CTCAG 7 cut(s) 304, 669, 734, 1035, 1371, 1473, 1718
BseNI ACTGG 6 cut(s) 460, 560, 601, 764, 1034, 1189
BseRI GAGGAG 5 cut(s) 213, 288, 291, 426, 1667
BseSI GKGCMC 1 cut(s) 1593
BseXI GCAGC 5 cut(s) 103, 297, 1003, 1564, 1726
Bsh1236I CGCG 3 cut(s) 48, 133, 141
Bsh1285I CGRYCG 4 cut(s) 27, 52, 178, 211
BshFI GGCC 8 cut(s) 5, 196, 882, 1085, 1188, 1227, 1753, 2134
BsiEI CGRYCG 4 cut(s) 27, 52, 178, 211
BsiHKAI GWGCWC 1 cut(s) 1593
BsiSI CCGG 4 cut(s) 23, 193, 280, 1330
BslFI GGGAC 6 cut(s) 161, 182, 326, 390, 613, 880
BsmAI GTCTC 5 cut(s) 153, 345, 1331, 1738, 2160
BsmBI CGTCTC 2 cut(s) 153, 1738
BsmFI GGGAC 6 cut(s) 161, 182, 326, 390, 613, 880
BsnI GGCC 8 cut(s) 5, 196, 882, 1085, 1188, 1227, 1753, 2134
Bso31I GGTCTC 2 cut(s) 345, 1331
Bsp1286I GDGCHC 2 cut(s) 1050, 1593
Bsp143I GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
Bsp1720I GCTNAGC 1 cut(s) 678
Bsp19I CCATGG 1 cut(s) 1279
Bsp68I TCGCGA 1 cut(s) 48
BspANI GGCC 8 cut(s) 5, 196, 882, 1085, 1188, 1227, 1753, 2134
BspCNI CTCAG 7 cut(s) 303, 670, 733, 1036, 1372, 1474, 1719
BspFNI CGCG 3 cut(s) 48, 133, 141
BspHI TCATGA 1 cut(s) 12
BspLI GGNNCC 9 cut(s) 170, 314, 868, 903, 987, 1180, 1549, 2119, 2175
BspPI GGATC 4 cut(s) 1427, 1487, 2168, 2181
BspTNI GGTCTC 2 cut(s) 345, 1331
BsrDI GCAATG 1 cut(s) 2055
BsrFI RCCGGY 2 cut(s) 22, 192
BsrI ACTGG 6 cut(s) 460, 560, 601, 764, 1034, 1189
BssAI RCCGGY 2 cut(s) 22, 192
BssECI CCNNGG 8 cut(s) 33, 425, 870, 883, 1080, 1279, 1437, 1551
BssMI GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
BssNAI GTATAC 1 cut(s) 1058
BssSI CACGAG 1 cut(s) 1622
BssT1I CCWWGG 5 cut(s) 33, 870, 1279, 1437, 1551
Bst1107I GTATAC 1 cut(s) 1058
Bst2BI CACGAG 1 cut(s) 1622
Bst2UI CCWGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
Bst4CI ACNGT 5 cut(s) 467, 528, 636, 799, 2230
Bst6I CTCTTC 1 cut(s) 1346
BstAPI GCANNNNNTGC 1 cut(s) 2059
BstBAI YACGTR 1 cut(s) 1943
BstC8I GCNNGC 4 cut(s) 194, 669, 965, 2136
BstDSI CCRYGG 1 cut(s) 1279
BstENI CCTNNNNNAGG 1 cut(s) 2088
BstF5I GGATG 2 cut(s) 778, 1522
BstFNI CGCG 3 cut(s) 48, 133, 141
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 4 cut(s) 141, 279, 684, 745
BstKTI GATC 8 cut(s) 12, 211, 1006, 1435, 1495, 1512, 2176, 2203
BstMAI GTCTC 5 cut(s) 153, 345, 1331, 1738, 2160
BstMBI GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
BstMCI CGRYCG 4 cut(s) 27, 52, 178, 211
BstMWI GCNNNNNNNGC 9 cut(s) 276, 285, 856, 973, 1025, 1185, 1233, 1654, 2059
BstNI CCWGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
BstNSI RCATGY 5 cut(s) 22, 824, 980, 1337, 1852
BstPAI GACNNNNGTC 3 cut(s) 42, 153, 1217
BstSCI CCNGG 9 cut(s) 365, 424, 484, 883, 1080, 1227, 1693, 1753, 1999
BstSFI CTRYAG 1 cut(s) 2239
BstSLI GKGCMC 1 cut(s) 1593
BstUI CGCG 3 cut(s) 48, 133, 141
BstV1I GCAGC 5 cut(s) 103, 297, 1003, 1564, 1726
BstV2I GAAGAC 2 cut(s) 78, 660
BstX2I RGATCY 4 cut(s) 1432, 1492, 2173, 2200
BstXI CCANNNNNNTGG 1 cut(s) 2129
BstYI RGATCY 4 cut(s) 1432, 1492, 2173, 2200
BstZ17I GTATAC 1 cut(s) 1058
Bsu36I CCTNAGG 1 cut(s) 1023
BsuI GTATCC 1 cut(s) 1286
BsuRI GGCC 8 cut(s) 5, 196, 882, 1085, 1188, 1227, 1753, 2134
BtgI CCRYGG 1 cut(s) 1279
BtrI CACGTC 2 cut(s) 569, 955
BtsCI GGATG 2 cut(s) 778, 1522
BtsI GCAGTG 2 cut(s) 1473, 2101
BtsIMutI CAGTG 6 cut(s) 594, 795, 1182, 1473, 2101, 2235
BtuMI TCGCGA 1 cut(s) 48
Cac8I GCNNGC 4 cut(s) 194, 669, 965, 2136
CciI TCATGA 1 cut(s) 12
CfoI GCGC 4 cut(s) 141, 279, 684, 745
Cfr10I RCCGGY 2 cut(s) 22, 192
CsiI ACCWGGT 2 cut(s) 484, 1693
Csp6I GTAC 4 cut(s) 307, 1202, 1724, 1940
CspCI CAANNNNNGTGG 2 cut(s) 1968, 2003
CviQI GTAC 4 cut(s) 307, 1202, 1724, 1940
DpnI GATC 8 cut(s) 11, 210, 1005, 1434, 1494, 1511, 2175, 2202
DpnII GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
DraIII CACNNNGTG 1 cut(s) 1697
DrdI GACNNNNNNGTC 1 cut(s) 510
DseDI GACNNNNNNGTC 1 cut(s) 510
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 1346
EarI CTCTTC 1 cut(s) 1346
EciI GGCGGA 3 cut(s) 99, 216, 222
Eco130I CCWWGG 5 cut(s) 33, 870, 1279, 1437, 1551
Eco24I GRGCYC 1 cut(s) 1050
Eco31I GGTCTC 2 cut(s) 345, 1331
Eco32I GATATC 1 cut(s) 689
Eco57I CTGAAG 2 cut(s) 693, 2061
Eco81I CCTNAGG 1 cut(s) 1023
EcoNI CCTNNNNNAGG 1 cut(s) 2088
EcoO109I RGGNCCY 5 cut(s) 169, 867, 1084, 1225, 2018
EcoRII CCWGG 9 cut(s) 365, 424, 484, 883, 1080, 1227, 1693, 1753, 1999
EcoRV GATATC 1 cut(s) 689
EcoT14I CCWWGG 5 cut(s) 33, 870, 1279, 1437, 1551
EcoT38I GRGCYC 1 cut(s) 1050
ErhI CCWWGG 5 cut(s) 33, 870, 1279, 1437, 1551
Esp3I CGTCTC 2 cut(s) 153, 1738
FaqI GGGAC 6 cut(s) 161, 182, 326, 390, 613, 880
FauI CCCGC 2 cut(s) 123, 1641
FblI GTMKAC 2 cut(s) 481, 1057
Fnu4HI GCNGC 7 cut(s) 89, 92, 286, 350, 1017, 1578, 1715
FokI GGATG 2 cut(s) 765, 1529
FriOI GRGCYC 1 cut(s) 1050
Fsp4HI GCNGC 7 cut(s) 89, 92, 286, 350, 1017, 1578, 1715
FspAI RTGCGCAY 1 cut(s) 744
FspBI CTAG 4 cut(s) 924, 1247, 2015, 2204
FspI TGCGCA 1 cut(s) 744
GlaI GCGC 4 cut(s) 140, 278, 683, 744
GluI GCNGC 7 cut(s) 89, 92, 286, 350, 1017, 1578, 1715
GsuI CTGGAG 2 cut(s) 1250, 2142
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 8 cut(s) 5, 196, 882, 1085, 1188, 1227, 1753, 2134
HapII CCGG 4 cut(s) 23, 193, 280, 1330
HhaI GCGC 4 cut(s) 141, 279, 684, 745
Hin6I GCGC 4 cut(s) 139, 277, 682, 743
HinP1I GCGC 4 cut(s) 139, 277, 682, 743
HincII GTYRAC 1 cut(s) 1066
HindII GTYRAC 1 cut(s) 1066
HinfI GANTC 9 cut(s) 29, 187, 403, 560, 1103, 1307, 1426, 1484, 1812
HpaII CCGG 4 cut(s) 23, 193, 280, 1330
HphI GGTGA 4 cut(s) 593, 1022, 1645, 1835
Hpy166II GTNNAC 7 cut(s) 482, 929, 1058, 1066, 1591, 1931, 2012
Hpy8I GTNNAC 7 cut(s) 482, 929, 1058, 1066, 1591, 1931, 2012
Hpy99I CGWCG 4 cut(s) 48, 88, 1907, 2184
HpyAV CCTTC 7 cut(s) 129, 146, 312, 608, 966, 1883, 2084
HpyCH4III ACNGT 5 cut(s) 467, 528, 636, 799, 2230
HpyCH4IV ACGT 6 cut(s) 568, 954, 1054, 1747, 1783, 1942
HpyF10VI GCNNNNNNNGC 9 cut(s) 276, 285, 856, 973, 1025, 1185, 1233, 1654, 2059
HpySE526I ACGT 6 cut(s) 568, 954, 1054, 1747, 1783, 1942
HspAI GCGC 4 cut(s) 139, 277, 682, 743
KroI GCCGGC 1 cut(s) 192
KroNI GCCGGC 1 cut(s) 194
Kzo9I GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
Lsp1109I GCAGC 5 cut(s) 103, 297, 1003, 1564, 1726
LweI GCATC 6 cut(s) 574, 1459, 1672, 1678, 1980, 2197
MabI ACCWGGT 2 cut(s) 484, 1693
MaeI CTAG 4 cut(s) 924, 1247, 2015, 2204
MaeII ACGT 6 cut(s) 568, 954, 1054, 1747, 1783, 1942
MaeIII GTNAC 2 cut(s) 1633, 2224
MalI GATC 8 cut(s) 11, 210, 1005, 1434, 1494, 1511, 2175, 2202
MboI GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
MboII GAAGA 7 cut(s) 83, 386, 665, 998, 1363, 1519, 2228
MflI RGATCY 4 cut(s) 1432, 1492, 2173, 2200
MhlI GDGCHC 2 cut(s) 1050, 1593
MluCI AATT 9 cut(s) 892, 934, 1116, 1166, 1583, 1669, 1862, 1921, 2142
MlyI GAGTC 8 cut(s) 38, 196, 412, 1097, 1316, 1435, 1493, 1821
MmeI TCCRAC 2 cut(s) 1383, 1896
MroNI GCCGGC 1 cut(s) 192
MroXI GAANNNNTTC 1 cut(s) 217
MseI TTAA 4 cut(s) 620, 738, 1602, 2186
MslI CAYNNNNRTG 3 cut(s) 17, 750, 924
MspA1I CMGCKG 2 cut(s) 671, 1016
MspI CCGG 4 cut(s) 23, 193, 280, 1330
MspR9I CCNGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
MvaI CCWGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
MvnI CGCG 3 cut(s) 48, 133, 141
MwoI GCNNNNNNNGC 9 cut(s) 276, 285, 856, 973, 1025, 1185, 1233, 1654, 2059
NaeI GCCGGC 1 cut(s) 194
NcoI CCATGG 1 cut(s) 1279
NdeII GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
NgoMIV GCCGGC 1 cut(s) 192
NlaIV GGNNCC 9 cut(s) 170, 314, 868, 903, 987, 1180, 1549, 2119, 2175
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 2 cut(s) 1633, 2224
NruI TCGCGA 1 cut(s) 48
NsbI TGCGCA 1 cut(s) 744
NspI RCATGY 5 cut(s) 22, 824, 980, 1337, 1852
PagI TCATGA 1 cut(s) 12
PcsI WCGNNNNNNNCGW 3 cut(s) 1789, 1798, 1807
PdiI GCCGGC 1 cut(s) 194
PdmI GAANNNNTTC 1 cut(s) 217
PfeI GAWTC 1 cut(s) 560
PfoI TCCNGGA 1 cut(s) 365
PkrI GCNGC 7 cut(s) 90, 93, 287, 351, 1018, 1579, 1716
Ple19I CGATCG 1 cut(s) 211
PleI GAGTC 8 cut(s) 37, 195, 411, 1097, 1315, 1434, 1492, 1820
PpsI GAGTC 8 cut(s) 37, 195, 411, 1097, 1315, 1434, 1492, 1820
Ppu21I YACGTR 1 cut(s) 1943
PpuMI RGGWCCY 3 cut(s) 169, 867, 2018
PshAI GACNNNNGTC 3 cut(s) 42, 153, 1217
Psp5II RGGWCCY 3 cut(s) 169, 867, 2018
Psp6I CCWGG 9 cut(s) 365, 424, 484, 883, 1080, 1227, 1693, 1753, 1999
PspGI CCWGG 9 cut(s) 365, 424, 484, 883, 1080, 1227, 1693, 1753, 1999
PspN4I GGNNCC 9 cut(s) 170, 314, 868, 903, 987, 1180, 1549, 2119, 2175
PspPPI RGGWCCY 3 cut(s) 169, 867, 2018
PsuI RGATCY 4 cut(s) 1432, 1492, 2173, 2200
PvuI CGATCG 1 cut(s) 211
PvuII CAGCTG 2 cut(s) 671, 1016
RruI TCGCGA 1 cut(s) 48
RsaI GTAC 4 cut(s) 308, 1203, 1725, 1941
RsaNI GTAC 4 cut(s) 307, 1202, 1724, 1940
RseI CAYNNNNRTG 3 cut(s) 17, 750, 924
SaqAI TTAA 4 cut(s) 620, 738, 1602, 2186
SatI GCNGC 7 cut(s) 89, 92, 286, 350, 1017, 1578, 1715
Sau3AI GATC 8 cut(s) 9, 208, 1003, 1432, 1492, 1509, 2173, 2200
SchI GAGTC 8 cut(s) 38, 196, 412, 1097, 1316, 1435, 1493, 1821
ScrFI CCNGG 9 cut(s) 367, 426, 486, 885, 1082, 1229, 1695, 1755, 2001
SduI GDGCHC 2 cut(s) 1050, 1593
SexAI ACCWGGT 2 cut(s) 484, 1693
SfaNI GCATC 6 cut(s) 574, 1459, 1672, 1678, 1980, 2197
SfcI CTRYAG 1 cut(s) 2239
SmiMI CAYNNNNRTG 3 cut(s) 17, 750, 924
SpeI ACTAGT 1 cut(s) 923
Sse9I AATT 9 cut(s) 892, 934, 1116, 1166, 1583, 1669, 1862, 1921, 2142
SspMI CTAG 4 cut(s) 924, 1247, 2015, 2204
StyD4I CCNGG 9 cut(s) 365, 424, 484, 883, 1080, 1227, 1693, 1753, 1999
StyI CCWWGG 5 cut(s) 33, 870, 1279, 1437, 1551
TaaI ACNGT 5 cut(s) 467, 528, 636, 799, 2230
TaiI ACGT 6 cut(s) 571, 957, 1057, 1750, 1786, 1945
TaqI TCGA 8 cut(s) 27, 157, 174, 211, 241, 1810, 1902, 2167
TaqII GACCGA 1 cut(s) 330
TasI AATT 9 cut(s) 892, 934, 1116, 1166, 1583, 1669, 1862, 1921, 2142
TatI WGTACW 1 cut(s) 1723
TauI GCSGC 2 cut(s) 91, 352
TfiI GAWTC 1 cut(s) 560
Tru1I TTAA 4 cut(s) 620, 738, 1602, 2186
Tru9I TTAA 4 cut(s) 620, 738, 1602, 2186
TscAI CASTG 6 cut(s) 601, 802, 1189, 1480, 2101, 2235
TseFI GTSAC 2 cut(s) 1633, 2224
TseI GCWGC 5 cut(s) 91, 285, 1016, 1577, 1714
Tsp45I GTSAC 2 cut(s) 1633, 2224
TspDTI ATGAA 8 cut(s) 29, 628, 831, 960, 1533, 1562, 1691, 2235
TspGWI ACGGA 3 cut(s) 294, 719, 1950
TspRI CASTG 6 cut(s) 601, 802, 1189, 1480, 2101, 2235
VneI GTGCAC 1 cut(s) 1589
XagI CCTNNNNNAGG 1 cut(s) 2088
XapI RAATTY 3 cut(s) 934, 1583, 1862
XbaI TCTAGA 1 cut(s) 2203
XceI RCATGY 5 cut(s) 22, 824, 980, 1337, 1852
XmiI GTMKAC 2 cut(s) 481, 1057
XmnI GAANNNNTTC 1 cut(s) 217
XspI CTAG 4 cut(s) 924, 1247, 2015, 2204
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.