Rw5G030960

Serrate RNA effector

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
OG0010205
Physical Location & Seq
Reverse (-)
49952816 .. 49960899
8084 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G030960.1

Sequence Viewer

Length: 2268 bp
ATGGCCGAGATCATGAACATGCCCGTCGACTCCTTGGACCGCCGTCGCGACCGCAAAGACAAGTCTTCCGAAGAGCCTCCTCAATCCTCGCCTCCGCCTCAACAACAACCACCACCACAGCAACAGCCGCCGCCGCCTCCTCCGCCATCGCGAAGACGCGACCGCGACGAAAAGGAGAGAGGAGATAGGGACCTCGACCGCCAGCCTCGCCGCCCGGACTACTACGACCGAGGAAATCGCTCCCCTCCGCCTCCGAGGGAGAGAGATAGGGACAGGGAATACAAGCGGCGGGGCAGCCTTAGTCCACCGCCTCCGTATAGGGACCGCAGGCACTCGCCGCCTCGGAGGTCGCCGCCGCCGCCCTTTAAGCGGTCGAGGAGGGAAGATGGAGGGTACGACGGCCGGAGAGGGAGTCCCAGAGGTGCCTTTGGACCTGGAGGTGATAGGAGGTCTGGATATGATTATGCAAGTGGATATGAGCGGGAGGTGGGGGCTAGACCTGCTTATGGTGATGACAGGCCTCATGGTCGTTATGCTGGACGCTCATCTGGTGGCTATGGCCCTTCTGACTGGGATTCAGGACGTGTTGGTTTTGGTGATGCTTCCAGCACTGGGACCACTCAAAGAGAAGGGCTGATGTCATACAAACAATTCATCCAAGAGTTGGAAGATGATATTTTGCCAGCTGAGGCTGAGCGCAGATATCAAGAATACAAGGCTGAGTATATTTCTACTCAGAAGCGAGCTTATTTTAATGCTCATAAAGAAGAGGAATGGCTAAAAGACAAATATCATCCCACAAACCTACTCACTGTAATTGAAAGGAGAAATGAAATAGCACGGAAAACAGCAAAGGATTTCCTGCTTGAACTGCAAAGTGGATCCTTGGACTTAGGCCCAGGTGTCAATCCCTCAGCTCCAAATAAATCTGGACATACTAGTGAACCAAATTCTGATGATGAAGCTGATGCGGATGGCAAGAGAAGACGGCATGGCAGGGAACCAAATAAAGAAAATGATCTTATTTCTACTGCTCCTAAGGCTCACCCAGTCAGTTCTGATCCTAGACGTATACAAGTTGACATTGAACAAGCCCAAGCCCTTGTCCGCAAACTTGACTCGGAAAAGGGAATTGTGGAGAACATTTTATGTGGACCTGATAATGACAAAATGAACAGGGAAAAATCTCATGGTGGTTCCACTGGCCCTGTTGTTATCGTACGGGGTTTGACATCTGTCAAGGGCCTTGAGGGTGTTGAGCTACTGGACACCCTTATTACTTATCTTTGGCGCATACATGGTGTAGATTATTATGGGATGATTGAGTCAAACGACGCTAAAGGTCTCAGGCATGTGAGAGTAGAGGTAAAGGGTTCTGATATAGGTAGTAATGGAGTTGAGTGGGAAAAGAAATTAGACTTGCATTGGCAAGAGAGATTGCATAGTCAAGATCCCTTGGAAATAATGACTGCCAAGGAAAAGATAGAAGCTGCTGCTGTTCAAGGCCTAGATCCCTTTGTGCGGAAGATTAGGGATGAAAAGTATGGCTGGAAGTATGGTTGTGGTGCCAAGGGATGCACTAAGCTCTTTCATGCTGCTGAATTTGTACATAAACATCTCAAGTTAAAACACCCTGAGCTACTGGTGGATGCGACTTTGAAAATGCGCGAGGATTTATATTTCCAGAACTACATGAATGATGCAGAGGCGCCAGGTGGAACTCCTGTTATGCAGCAATCGATACTGAGGGACAAGCCACAGAGACGTAGGCCGGGTATGGAGAATAGATTGAAAGATGAGCGTGGTAATCGGAGAGAACGCGAAAACCGAGCTAATGGTGGTGAGAGGTATGATAGGTCTGAGAATATGCAAGGTGAATTCCAGTCCAACAATGATGGTCAAGATGGAGGAAATCATGATGAACCAATGTATGATAATTTTGGTGGACAAGGGATGCATGCTGGTCCTCCTTTCCCATCAGATATACCCCCACCACCTGTATTGATGCCTGTGCCTGGTGCTGGTCCTCTTGGGCCTTTTGTTCCTGCTCCACCTGAAGTTGCGATGCAGATGTTGCGAGAGCAAGGTGGTCCTCCACCCTTTGAAGGCAGTGGTAGAAATATGTGGCCTGGACCCCAAATGAGTGGGCCAGCCCCAATTCTTGCTTTGTCTCCAGCTTTTCGACAGGATCCTCGACGTTTAAGAAGTTATCAAGATCTAGATGCACCGGAGGATGAAGTCACAGTGATAGACTACAGGAGCTTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000381 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0005846 GO:0006139 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010445 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034518 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048024 GO:0048367 GO:0048509 GO:0048519 GO:0048731 GO:0048856 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1903311 GO:1903506 GO:2000011 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARS2 DUF3546

Protein Analysis

755

Amino Acids

85.31

Weight (kDa)

7.33

Isoelectric Point (pI)

73.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SERRATE_Ars2_N PF12066 216 - 297 2.3e-21 SERRATE/Ars2, N-terminal domain
ARS2 PF04959 453 - 660 2.4e-41 Arsenite-resistance protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 508
AccB1I GGYRCC 3 cut(s) 422, 1565, 1708
AccB7I CCANNNNNTGG 1 cut(s) 664
AccBSI CCGCTC 1 cut(s) 481
AccI GTMKAC 2 cut(s) 27, 1072
AccII CGCG 6 cut(s) 48, 151, 159, 165, 1668, 1821
AclWI GGATC 7 cut(s) 876, 889, 1055, 1445, 1505, 2183, 2196
AcoI YGGCCR 2 cut(s) 3, 400
AcsI RAATTY 3 cut(s) 949, 1601, 1877
AcuI CTGAAG 1 cut(s) 2076
AcyI GRCGYC 1 cut(s) 1709
AfaI GTAC 3 cut(s) 395, 1221, 1608
AfiI CCNNNNNNNGG 8 cut(s) 369, 506, 612, 664, 1521, 2015, 2021, 2105
AflIII ACRYGT 1 cut(s) 583
AgsI TTSAA 7 cut(s) 821, 869, 1088, 1502, 1660, 1792, 2105
AhlI ACTAGT 1 cut(s) 938
AjiI CACGTC 1 cut(s) 584
AjnI CCWGG 5 cut(s) 433, 898, 1711, 2014, 2128
Alw26I GTCTC 3 cut(s) 1349, 1756, 2175
AlwI GGATC 7 cut(s) 876, 889, 1055, 1445, 1505, 2183, 2196
ApeKI GCWGC 5 cut(s) 294, 1490, 1493, 1595, 1732
ApoI RAATTY 3 cut(s) 949, 1601, 1877
AspLEI GCGC 4 cut(s) 699, 1293, 1668, 1711
AsuC2I CCSGG 2 cut(s) 215, 1773
AsuHPI GGTGA 6 cut(s) 452, 521, 608, 1037, 1853, 1886
AxyI CCTNAGG 1 cut(s) 1038
BamHI GGATCC 2 cut(s) 881, 2188
BanI GGYRCC 3 cut(s) 422, 1565, 1708
BbsI GAAGAC 3 cut(s) 57, 160, 991
BbvCI CCTCAGC 2 cut(s) 687, 913
BbvI GCAGC 5 cut(s) 306, 1477, 1480, 1582, 1744
BccI CCATC 6 cut(s) 154, 380, 968, 1889, 1898, 1984
BceAI ACGGC 3 cut(s) 27, 415, 1004
BciT130I CCWGG 5 cut(s) 435, 900, 1713, 2016, 2130
BcnI CCSGG 2 cut(s) 215, 1773
BcoDI GTCTC 3 cut(s) 1349, 1756, 2175
BcuI ACTAGT 1 cut(s) 938
BfaI CTAG 5 cut(s) 495, 939, 1065, 1508, 2219
BfmI CTRYAG 1 cut(s) 2254
BfoI RGCGCY 1 cut(s) 1712
BfuAI ACCTGC 1 cut(s) 508
BglII AGATCT 1 cut(s) 2215
BlpI GCTNAGC 1 cut(s) 693
Bme1390I CCNGG 7 cut(s) 215, 435, 900, 1713, 1773, 2016, 2130
BmgBI CACGTC 1 cut(s) 584
BmrFI CCNGG 7 cut(s) 215, 435, 900, 1713, 1773, 2016, 2130
BmrI ACTGGG 3 cut(s) 580, 621, 1043
BmsI GCATC 9 cut(s) 589, 958, 1565, 1639, 1690, 1944, 1995, 2055, 2212
BmuI ACTGGG 3 cut(s) 580, 621, 1043
BoxI GACNNNNGTC 2 cut(s) 42, 1235
BpiI GAAGAC 3 cut(s) 57, 160, 991
BpmI CTGGAG 2 cut(s) 456, 2157
Bpu10I CCTNAGC 3 cut(s) 687, 913, 1635
Bpu1102I GCTNAGC 1 cut(s) 693
BpuEI CTTGAG 2 cut(s) 1268, 1604
BpuMI CCSGG 2 cut(s) 215, 1773
Bsa29I ATCGAT 1 cut(s) 1739
BsaHI GRCGYC 1 cut(s) 1709
BsaI GGTCTC 1 cut(s) 1349
BsaJI CCNNGG 9 cut(s) 33, 229, 254, 341, 885, 898, 1455, 1473, 1569
BsaWI WCCGGW 1 cut(s) 2227
BsaXI ACNNNNNCTCC 2 cut(s) 397, 427
Bsc4I CCNNNNNNNGG 8 cut(s) 369, 506, 612, 664, 1521, 2015, 2021, 2105
Bse1I ACTGG 7 cut(s) 575, 616, 1049, 1207, 1269, 1647, 1882
Bse21I CCTNAGG 1 cut(s) 1038
BseBI CCWGG 5 cut(s) 435, 900, 1713, 2016, 2130
BseCI ATCGAT 1 cut(s) 1739
BseDI CCNNGG 9 cut(s) 33, 229, 254, 341, 885, 898, 1455, 1473, 1569
BseGI GGATG 9 cut(s) 654, 793, 979, 1323, 1540, 1580, 1654, 1959, 2239
BseLI CCNNNNNNNGG 8 cut(s) 369, 506, 612, 664, 1521, 2015, 2021, 2105
BseMII CTCAG 9 cut(s) 678, 684, 711, 749, 927, 1360, 1626, 1736, 1851
BseNI ACTGG 7 cut(s) 575, 616, 1049, 1207, 1269, 1647, 1882
BseRI GAGGAG 4 cut(s) 69, 129, 195, 391
BseX3I CGGCCG 1 cut(s) 400
BseXI GCAGC 5 cut(s) 306, 1477, 1480, 1582, 1744
Bsh1236I CGCG 6 cut(s) 48, 151, 159, 165, 1668, 1821
Bsh1285I CGRYCG 6 cut(s) 52, 163, 199, 229, 374, 403
BshNI GGYRCC 3 cut(s) 422, 1565, 1708
BshVI ATCGAT 1 cut(s) 1739
BsiEI CGRYCG 6 cut(s) 52, 163, 199, 229, 374, 403
BsiSI CCGG 4 cut(s) 215, 403, 1772, 2228
BsiWI CGTACG 1 cut(s) 1219
BslFI GGGAC 6 cut(s) 203, 284, 335, 399, 628, 1763
BslI CCNNNNNNNGG 8 cut(s) 369, 506, 612, 664, 1521, 2015, 2021, 2105
BsmAI GTCTC 3 cut(s) 1349, 1756, 2175
BsmBI CGTCTC 1 cut(s) 1756
BsmFI GGGAC 6 cut(s) 203, 284, 335, 399, 628, 1763
Bso31I GGTCTC 1 cut(s) 1349
Bsp1407I TGTACA 1 cut(s) 1606
Bsp143I GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
Bsp1720I GCTNAGC 1 cut(s) 693
Bsp68I TCGCGA 2 cut(s) 48, 151
BspCNI CTCAG 9 cut(s) 679, 685, 712, 748, 926, 1359, 1627, 1737, 1852
BspDI ATCGAT 1 cut(s) 1739
BspFNI CGCG 6 cut(s) 48, 151, 159, 165, 1668, 1821
BspHI TCATGA 2 cut(s) 12, 1915
BspMI ACCTGC 1 cut(s) 508
BspPI GGATC 7 cut(s) 876, 889, 1055, 1445, 1505, 2183, 2196
BspQI GCTCTTC 1 cut(s) 66
BspT107I GGYRCC 3 cut(s) 422, 1565, 1708
BspTNI GGTCTC 1 cut(s) 1349
BsrBI CCGCTC 1 cut(s) 481
BsrGI TGTACA 1 cut(s) 1606
BsrI ACTGG 7 cut(s) 575, 616, 1049, 1207, 1269, 1647, 1882
BssECI CCNNGG 9 cut(s) 33, 229, 254, 341, 885, 898, 1455, 1473, 1569
BssMI GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
BssNAI GTATAC 1 cut(s) 1073
BssNI GRCGYC 1 cut(s) 1709
BssT1I CCWWGG 5 cut(s) 33, 885, 1455, 1473, 1569
Bst1107I GTATAC 1 cut(s) 1073
Bst2UI CCWGG 5 cut(s) 435, 900, 1713, 2016, 2130
Bst4CI ACNGT 2 cut(s) 814, 2245
Bst6I CTCTTC 2 cut(s) 66, 762
BstACI GRCGYC 1 cut(s) 1709
BstAPI GCANNNNNTGC 1 cut(s) 2074
BstAUI TGTACA 1 cut(s) 1606
BstC8I GCNNGC 6 cut(s) 203, 329, 684, 744, 1959, 2151
BstF5I GGATG 9 cut(s) 654, 793, 979, 1323, 1540, 1580, 1654, 1959, 2239
BstFNI CGCG 6 cut(s) 48, 151, 159, 165, 1668, 1821
BstH2I RGCGCY 1 cut(s) 1712
BstHHI GCGC 4 cut(s) 699, 1293, 1668, 1711
BstKTI GATC 8 cut(s) 12, 884, 1021, 1063, 1453, 1513, 2191, 2218
BstMAI GTCTC 3 cut(s) 1349, 1756, 2175
BstMBI GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
BstMCI CGRYCG 6 cut(s) 52, 163, 199, 229, 374, 403
BstNI CCWGG 5 cut(s) 435, 900, 1713, 2016, 2130
BstNSI RCATGY 3 cut(s) 22, 1355, 1961
BstPAI GACNNNNGTC 2 cut(s) 42, 1235
BstSCI CCNGG 7 cut(s) 213, 433, 898, 1711, 1771, 2014, 2128
BstSFI CTRYAG 1 cut(s) 2254
BstUI CGCG 6 cut(s) 48, 151, 159, 165, 1668, 1821
BstV1I GCAGC 5 cut(s) 306, 1477, 1480, 1582, 1744
BstV2I GAAGAC 3 cut(s) 57, 160, 991
BstX2I RGATCY 5 cut(s) 881, 1450, 1510, 2188, 2215
BstXI CCANNNNNNTGG 1 cut(s) 2144
BstYI RGATCY 5 cut(s) 881, 1450, 1510, 2188, 2215
BstZ17I GTATAC 1 cut(s) 1073
BstZI CGGCCG 1 cut(s) 400
Bsu15I ATCGAT 1 cut(s) 1739
Bsu36I CCTNAGG 1 cut(s) 1038
BsuTUI ATCGAT 1 cut(s) 1739
BtgZI GCGATG 2 cut(s) 132, 2078
BtrI CACGTC 1 cut(s) 584
BtsCI GGATG 9 cut(s) 654, 793, 979, 1323, 1540, 1580, 1654, 1959, 2239
BtsI GCAGTG 1 cut(s) 2116
BtsIMutI CAGTG 5 cut(s) 609, 810, 1200, 2116, 2250
BtuMI TCGCGA 2 cut(s) 48, 151
BveI ACCTGC 1 cut(s) 508
Cac8I GCNNGC 6 cut(s) 203, 329, 684, 744, 1959, 2151
CciI TCATGA 2 cut(s) 12, 1915
CfoI GCGC 4 cut(s) 699, 1293, 1668, 1711
ClaI ATCGAT 1 cut(s) 1739
CseI GACGC 3 cut(s) 165, 549, 1343
Csp6I GTAC 3 cut(s) 394, 1220, 1607
CspCI CAANNNNNGTGG 2 cut(s) 1983, 2018
CviQI GTAC 3 cut(s) 394, 1220, 1607
DinI GGCGCC 1 cut(s) 1710
DpnI GATC 8 cut(s) 11, 883, 1020, 1062, 1452, 1512, 2190, 2217
DpnII GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
EaeI YGGCCR 2 cut(s) 3, 400
EagI CGGCCG 1 cut(s) 400
Eam1104I CTCTTC 2 cut(s) 66, 762
EarI CTCTTC 2 cut(s) 66, 762
EciI GGCGGA 3 cut(s) 84, 132, 237
EclXI CGGCCG 1 cut(s) 400
Eco130I CCWWGG 5 cut(s) 33, 885, 1455, 1473, 1569
Eco147I AGGCCT 2 cut(s) 520, 1506
Eco31I GGTCTC 1 cut(s) 1349
Eco32I GATATC 1 cut(s) 704
Eco52I CGGCCG 1 cut(s) 400
Eco57I CTGAAG 1 cut(s) 2076
Eco81I CCTNAGG 1 cut(s) 1038
EcoO109I RGGNCCY 2 cut(s) 190, 1243
EcoRI GAATTC 1 cut(s) 1877
EcoRII CCWGG 5 cut(s) 433, 898, 1711, 2014, 2128
EcoRV GATATC 1 cut(s) 704
EcoT14I CCWWGG 5 cut(s) 33, 885, 1455, 1473, 1569
EcoT22I ATGCAT 1 cut(s) 1959
EgeI GGCGCC 1 cut(s) 1710
EheI GGCGCC 1 cut(s) 1710
ErhI CCWWGG 5 cut(s) 33, 885, 1455, 1473, 1569
Esp3I CGTCTC 1 cut(s) 1756
FaqI GGGAC 6 cut(s) 203, 284, 335, 399, 628, 1763
FauI CCCGC 2 cut(s) 282, 474
FblI GTMKAC 2 cut(s) 27, 1072
FokI GGATG 9 cut(s) 641, 780, 986, 1330, 1547, 1587, 1661, 1966, 2246
FspBI CTAG 5 cut(s) 495, 939, 1065, 1508, 2219
GlaI GCGC 4 cut(s) 698, 1292, 1667, 1710
GsuI CTGGAG 2 cut(s) 456, 2157
HaeII RGCGCY 1 cut(s) 1712
HapII CCGG 4 cut(s) 215, 403, 1772, 2228
HgaI GACGC 3 cut(s) 165, 549, 1343
HhaI GCGC 4 cut(s) 699, 1293, 1668, 1711
Hin1I GRCGYC 1 cut(s) 1709
Hin6I GCGC 4 cut(s) 697, 1291, 1666, 1709
HinP1I GCGC 4 cut(s) 697, 1291, 1666, 1709
HincII GTYRAC 2 cut(s) 28, 1081
HindII GTYRAC 2 cut(s) 28, 1081
HinfI GANTC 5 cut(s) 29, 412, 575, 1118, 1325
HpaII CCGG 4 cut(s) 215, 403, 1772, 2228
HphI GGTGA 6 cut(s) 452, 521, 608, 1037, 1853, 1886
Hpy166II GTNNAC 7 cut(s) 28, 305, 944, 1073, 1081, 1154, 1946
Hpy8I GTNNAC 7 cut(s) 28, 305, 944, 1073, 1081, 1154, 1946
Hpy99I CGWCG 6 cut(s) 29, 48, 170, 401, 1337, 2199
HpyAV CCTTC 3 cut(s) 573, 623, 2099
HpyCH4III ACNGT 2 cut(s) 814, 2245
HpyCH4IV ACGT 4 cut(s) 583, 1069, 1765, 2197
HpySE526I ACGT 4 cut(s) 583, 1069, 1765, 2197
Hsp92I GRCGYC 1 cut(s) 1709
HspAI GCGC 4 cut(s) 697, 1291, 1666, 1709
KasI GGCGCC 1 cut(s) 1708
Kzo9I GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
LguI GCTCTTC 1 cut(s) 66
LmnI GCTCC 5 cut(s) 245, 922, 1039, 2053, 2259
Lsp1109I GCAGC 5 cut(s) 306, 1477, 1480, 1582, 1744
LweI GCATC 9 cut(s) 589, 958, 1565, 1639, 1690, 1944, 1995, 2055, 2212
MaeI CTAG 5 cut(s) 495, 939, 1065, 1508, 2219
MaeII ACGT 4 cut(s) 583, 1069, 1765, 2197
MaeIII GTNAC 1 cut(s) 2239
MalI GATC 8 cut(s) 11, 883, 1020, 1062, 1452, 1512, 2190, 2217
MbiI CCGCTC 1 cut(s) 481
MboI GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
MboII GAAGA 8 cut(s) 57, 83, 165, 395, 680, 779, 996, 1537
MflI RGATCY 5 cut(s) 881, 1450, 1510, 2188, 2215
MluCI AATT 9 cut(s) 650, 816, 949, 1131, 1412, 1601, 1877, 1936, 2157
Mly113I GGCGCC 1 cut(s) 1709
MlyI GAGTC 4 cut(s) 23, 421, 1112, 1334
MmeI TCCRAC 2 cut(s) 645, 1911
Mph1103I ATGCAT 1 cut(s) 1959
MseI TTAA 4 cut(s) 366, 753, 1625, 2201
MslI CAYNNNNRTG 2 cut(s) 17, 939
MspA1I CMGCKG 1 cut(s) 686
MspI CCGG 4 cut(s) 215, 403, 1772, 2228
MspR9I CCNGG 7 cut(s) 215, 435, 900, 1713, 1773, 2016, 2130
MvaI CCWGG 5 cut(s) 435, 900, 1713, 2016, 2130
MvnI CGCG 6 cut(s) 48, 151, 159, 165, 1668, 1821
NarI GGCGCC 1 cut(s) 1709
NciI CCSGG 2 cut(s) 215, 1773
NdeII GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
NmeAIII GCCGAG 1 cut(s) 31
NmuCI GTSAC 1 cut(s) 2239
NruI TCGCGA 2 cut(s) 48, 151
NsiI ATGCAT 1 cut(s) 1959
NspI RCATGY 3 cut(s) 22, 1355, 1961
PaeI GCATGC 1 cut(s) 1961
PagI TCATGA 2 cut(s) 12, 1915
PceI AGGCCT 2 cut(s) 520, 1506
PciSI GCTCTTC 1 cut(s) 66
PcsI WCGNNNNNNNCGW 1 cut(s) 1825
PfeI GAWTC 1 cut(s) 575
Pfl23II CGTACG 1 cut(s) 1219
PflMI CCANNNNNTGG 1 cut(s) 664
PleI GAGTC 4 cut(s) 23, 420, 1112, 1333
PluTI GGCGCC 1 cut(s) 1712
PpsI GAGTC 4 cut(s) 23, 420, 1112, 1333
PpuMI RGGWCCY 1 cut(s) 190
PshAI GACNNNNGTC 2 cut(s) 42, 1235
Psp5II RGGWCCY 1 cut(s) 190
Psp6I CCWGG 5 cut(s) 433, 898, 1711, 2014, 2128
PspGI CCWGG 5 cut(s) 433, 898, 1711, 2014, 2128
PspLI CGTACG 1 cut(s) 1219
PspPPI RGGWCCY 1 cut(s) 190
PsuI RGATCY 5 cut(s) 881, 1450, 1510, 2188, 2215
PvuII CAGCTG 1 cut(s) 686
RruI TCGCGA 2 cut(s) 48, 151
RsaI GTAC 3 cut(s) 395, 1221, 1608
RsaNI GTAC 3 cut(s) 394, 1220, 1607
RseI CAYNNNNRTG 2 cut(s) 17, 939
SalI GTCGAC 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 66
SaqAI TTAA 4 cut(s) 366, 753, 1625, 2201
Sau3AI GATC 8 cut(s) 9, 881, 1018, 1060, 1450, 1510, 2188, 2215
SchI GAGTC 4 cut(s) 23, 421, 1112, 1334
ScrFI CCNGG 7 cut(s) 215, 435, 900, 1713, 1773, 2016, 2130
SfaNI GCATC 9 cut(s) 589, 958, 1565, 1639, 1690, 1944, 1995, 2055, 2212
SfcI CTRYAG 1 cut(s) 2254
SfoI GGCGCC 1 cut(s) 1710
SmiMI CAYNNNNRTG 2 cut(s) 17, 939
SmlI CTYRAG 2 cut(s) 1247, 1619
SmoI CTYRAG 2 cut(s) 1247, 1619
SpeI ACTAGT 1 cut(s) 938
SphI GCATGC 1 cut(s) 1961
Sse9I AATT 9 cut(s) 650, 816, 949, 1131, 1412, 1601, 1877, 1936, 2157
SseBI AGGCCT 2 cut(s) 520, 1506
SspDI GGCGCC 1 cut(s) 1708
SspMI CTAG 5 cut(s) 495, 939, 1065, 1508, 2219
StuI AGGCCT 2 cut(s) 520, 1506
StyD4I CCNGG 7 cut(s) 213, 433, 898, 1711, 1771, 2014, 2128
StyI CCWWGG 5 cut(s) 33, 885, 1455, 1473, 1569
TaaI ACNGT 2 cut(s) 814, 2245
TaiI ACGT 4 cut(s) 586, 1072, 1768, 2200
TaqI TCGA 6 cut(s) 27, 195, 374, 1739, 2182, 2194
TaqII GACCGA 1 cut(s) 243
TasI AATT 9 cut(s) 650, 816, 949, 1131, 1412, 1601, 1877, 1936, 2157
TatI WGTACW 1 cut(s) 1606
TauI GCSGC 9 cut(s) 130, 133, 136, 213, 289, 340, 355, 358, 361
TfiI GAWTC 1 cut(s) 575
Tru1I TTAA 4 cut(s) 366, 753, 1625, 2201
Tru9I TTAA 4 cut(s) 366, 753, 1625, 2201
TscAI CASTG 5 cut(s) 616, 817, 1207, 2116, 2250
TseFI GTSAC 1 cut(s) 2239
TseI GCWGC 5 cut(s) 294, 1490, 1493, 1595, 1732
Tsp45I GTSAC 1 cut(s) 2239
TspGWI ACGGA 2 cut(s) 303, 856
TspRI CASTG 5 cut(s) 616, 817, 1207, 2116, 2250
Van91I CCANNNNNTGG 1 cut(s) 664
XapI RAATTY 3 cut(s) 949, 1601, 1877
XbaI TCTAGA 1 cut(s) 2218
XceI RCATGY 3 cut(s) 22, 1355, 1961
XmiI GTMKAC 2 cut(s) 27, 1072
XspI CTAG 5 cut(s) 495, 939, 1065, 1508, 2219
Zsp2I ATGCAT 1 cut(s) 1959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.