Rh5DG350700

Serrate RNA effector

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
OG0010205
Physical Location & Seq
Reverse (-)
48398794 .. 48407086
8293 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG350700.1

Sequence Viewer

Length: 1680 bp
ATGAATCAGAGAATCTCAGTATTTTCCTTCTTTCCAGACTGGGATTCAGGACGTGTTGGTTTTGGTGATGCTTCCAGCACTGGGACCACTCAAAGAGAAGGGCTGATGTCATACAAACAATTCATCCAAGAGTTGGAAGATGATATTTTGCCAGCTGAGGCTGAGCGCAGATATCAAGAATACAAGGCAGAGTATATTTCTACTCAGAAGCGAGCTTATTTTAATACTCATAAAGAAGAGGAATGGCTAAAAGACAAATATCATCCCACAAACCTACTCACTGTAATTGAAAGGAGAAATGAAATAGCACGGAAAACAGCAAAGGATTTCCTGCTTGAACTGCAAAGTGGATCCTTGGACTTAGGCCCAGGTGTCAATCCCTCAGCTCCAAATAAATCTGGACATACTAGTGAACCAAATTCTGATGATGAAGCTGATGCGGATGGCAAGAGAAGACGGCATGGCAGGGAACCAAATAAAGAAAATGATCTTATTTCTACTGCTCCTAAGGCTCACCCAGTCAGTTCTGATCCTAGACGTATACAAGTTGACATTGAACAAGCCCAAGCCCTTGTCCGCAAACTTGACTCGGAAAAAGGAATTGTGGAGAACATTTTATGTGGACCTGATAATGACAAAATGAACAGGGAAAAATCTCATGGTGGTTCCACTGGCCCTGTTGTTATCGTACGGGGTTTGACATCTGTCAAGGGCCTTGAGGGTGTTGAGCTACTGGACACCCTTATTACTTATCTTTGGCGCATACATGGTGTAGATTATTATGGGATGATTGAGTCAAACGACGCTAAAGGTCTCAGGCATGTGAGAGTAGAGGTAAAGGGTTCCGATATAGGTAGTAATGGAGCTGAGTGGGAAAAGAAATTAGACTTGCATTGGCAAGAGAGATTGCATAGTCAAGATCCCTTGGAAATAATGACTGCCAAGGAAAAGATAGAAGCTGCTGCTGTTCAAGGCCTAGATCCCTTTGTGCGGAAGATTAGGGATGAAAAGTATGGCTGGAAGTATGGTTGTGGTGCCAAGGGATGCACTAAGCTCTTTCATGCTGCTGAATTTGTACACAAACATCTCAAGTTAAAACACCCTGAGCTACTGGTGGATGCGACTTTGAAAATGCGCGAGGATTTATATTTCCAGAACTACATGAATGATGCAGAGGCGCCAGGTGGAACTCCTGTTATGCAGCAATCGATACTGAGGGACAAGCCACAGAGACGTAGGCCGGGTATGGAGAATAGATTGAAAGATGAGCGTGGTAATCGGAGAGAACGCGAAAACCGAGCTAATGGTGGTGAGAGGTATGATAGGTCTGAGAATATGCAAGGTGAATTCCAGTCCAACAATGATGGTCAAGATGGAGGAAATCATGATGAACCAATGTATGATAATTTTGGTGGACAAGGGATGCATGCTGGTCCTCCTTTCCCATCAGATATACCCCCACCACCTGTATTGATGCCTGTGCCTGGTGCTGGTCCTCTCGGGCCTTTTGTTCCTGCTCCACCTGAAGTTGCAATGCAGATGTTGCGAGAGCAAGGTGGTCCTCCACCCTTTGAAGGCAGTGGTAGAAATATGTGGCCTGGACCCCAAATGAGTGGGCCAGCCCCAATTCTTGCTTTGTCTCCAGCTTTTCGACAGGATCCTCGACGTTTAAGAAGGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000381 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005730 GO:0005737 GO:0005829 GO:0005846 GO:0006139 GO:0006355 GO:0006396 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009507 GO:0009536 GO:0009889 GO:0009892 GO:0009987 GO:0010033 GO:0010267 GO:0010445 GO:0010467 GO:0010468 GO:0010556 GO:0010605 GO:0010608 GO:0010629 GO:0014070 GO:0016070 GO:0016246 GO:0016441 GO:0016458 GO:0016604 GO:0016607 GO:0019219 GO:0019222 GO:0030422 GO:0031047 GO:0031050 GO:0031053 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0034470 GO:0034518 GO:0034641 GO:0034660 GO:0035194 GO:0035195 GO:0035196 GO:0040029 GO:0042221 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043331 GO:0043484 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044451 GO:0044464 GO:0046483 GO:0048024 GO:0048367 GO:0048509 GO:0048519 GO:0048731 GO:0048856 GO:0050684 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070887 GO:0070918 GO:0071310 GO:0071359 GO:0071407 GO:0071704 GO:0080090 GO:0090304 GO:0097159 GO:0140110 GO:1901360 GO:1901363 GO:1901698 GO:1901699 GO:1903311 GO:1903506 GO:2000011 GO:2000026 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ARS2 DUF3546

Protein Analysis

559

Amino Acids

62.9

Weight (kDa)

6.2

Isoelectric Point (pI)

55.63

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SERRATE_Ars2_N PF12066 39 - 120 2.1e-21 SERRATE/Ars2, N-terminal domain
ARS2 PF04959 276 - 483 2e-41 Arsenite-resistance protein 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1034, 1177
AccB7I CCANNNNNTGG 1 cut(s) 133
AccI GTMKAC 1 cut(s) 541
AccII CGCG 2 cut(s) 1137, 1290
AciI CCGC 3 cut(s) 440, 577, 991
AclWI GGATC 7 cut(s) 345, 358, 524, 914, 974, 1652, 1665
AcsI RAATTY 3 cut(s) 418, 1070, 1346
AcuI CTGAAG 1 cut(s) 1545
AcyI GRCGYC 1 cut(s) 1178
AfaI GTAC 2 cut(s) 690, 1077
AfiI CCNNNNNNNGG 6 cut(s) 81, 133, 990, 1484, 1490, 1574
AflIII ACRYGT 1 cut(s) 52
AgsI TTSAA 7 cut(s) 290, 338, 557, 971, 1129, 1261, 1574
AhlI ACTAGT 1 cut(s) 407
AjiI CACGTC 1 cut(s) 53
AjnI CCWGG 4 cut(s) 367, 1180, 1483, 1597
Alw26I GTCTC 3 cut(s) 818, 1225, 1644
AlwI GGATC 7 cut(s) 345, 358, 524, 914, 974, 1652, 1665
Ama87I CYCGRG 1 cut(s) 1499
AoxI GGCC 8 cut(s) 364, 673, 712, 973, 1238, 1502, 1595, 1616
ApeKI GCWGC 4 cut(s) 959, 962, 1064, 1201
ApoI RAATTY 3 cut(s) 418, 1070, 1346
AspLEI GCGC 4 cut(s) 168, 762, 1137, 1180
AsuC2I CCSGG 1 cut(s) 1242
AsuHPI GGTGA 4 cut(s) 77, 506, 1322, 1355
AvaI CYCGRG 1 cut(s) 1499
AvaII GGWCC 6 cut(s) 84, 623, 1433, 1493, 1559, 1601
AxyI CCTNAGG 1 cut(s) 507
BamHI GGATCC 2 cut(s) 350, 1657
BanI GGYRCC 2 cut(s) 1034, 1177
BbsI GAAGAC 1 cut(s) 460
BbvCI CCTCAGC 2 cut(s) 156, 382
BbvI GCAGC 4 cut(s) 946, 949, 1051, 1213
BccI CCATC 4 cut(s) 437, 1358, 1367, 1453
BceAI ACGGC 1 cut(s) 473
BciT130I CCWGG 4 cut(s) 369, 1182, 1485, 1599
BcnI CCSGG 1 cut(s) 1242
BcoDI GTCTC 3 cut(s) 818, 1225, 1644
BcuI ACTAGT 1 cut(s) 407
BfaI CTAG 3 cut(s) 408, 534, 977
BfoI RGCGCY 1 cut(s) 1181
BisI GCNGC 4 cut(s) 960, 963, 1065, 1202
BlpI GCTNAGC 1 cut(s) 162
BlsI GCNGC 4 cut(s) 961, 964, 1066, 1203
Bme1390I CCNGG 5 cut(s) 369, 1182, 1242, 1485, 1599
Bme18I GGWCC 6 cut(s) 84, 623, 1433, 1493, 1559, 1601
BmeT110I CYCGRG 1 cut(s) 1499
BmgBI CACGTC 1 cut(s) 53
BmiI GGNNCC 9 cut(s) 85, 352, 471, 667, 844, 1036, 1179, 1603, 1659
BmrFI CCNGG 5 cut(s) 369, 1182, 1242, 1485, 1599
BmrI ACTGGG 3 cut(s) 49, 90, 512
BmsI GCATC 7 cut(s) 58, 427, 1034, 1108, 1159, 1413, 1464
BmuI ACTGGG 3 cut(s) 49, 90, 512
BoxI GACNNNNGTC 1 cut(s) 704
BpiI GAAGAC 1 cut(s) 460
BpmI CTGGAG 1 cut(s) 1626
Bpu10I CCTNAGC 3 cut(s) 156, 382, 1104
Bpu1102I GCTNAGC 1 cut(s) 162
BpuEI CTTGAG 2 cut(s) 737, 1073
BpuMI CCSGG 1 cut(s) 1242
Bsa29I ATCGAT 1 cut(s) 1208
BsaHI GRCGYC 1 cut(s) 1178
BsaI GGTCTC 1 cut(s) 818
BsaJI CCNNGG 5 cut(s) 354, 367, 924, 942, 1038
Bsc4I CCNNNNNNNGG 6 cut(s) 81, 133, 990, 1484, 1490, 1574
Bse1I ACTGG 7 cut(s) 44, 85, 518, 676, 738, 1116, 1351
Bse21I CCTNAGG 1 cut(s) 507
Bse3DI GCAATG 1 cut(s) 1539
BseBI CCWGG 4 cut(s) 369, 1182, 1485, 1599
BseCI ATCGAT 1 cut(s) 1208
BseDI CCNNGG 5 cut(s) 354, 367, 924, 942, 1038
BseGI GGATG 8 cut(s) 123, 262, 448, 792, 1009, 1049, 1123, 1428
BseLI CCNNNNNNNGG 6 cut(s) 81, 133, 990, 1484, 1490, 1574
BseMI GCAATG 1 cut(s) 1539
BseNI ACTGG 7 cut(s) 44, 85, 518, 676, 738, 1116, 1351
BseXI GCAGC 4 cut(s) 946, 949, 1051, 1213
Bsh1236I CGCG 2 cut(s) 1137, 1290
BshFI GGCC 8 cut(s) 366, 675, 714, 975, 1240, 1504, 1597, 1618
BshNI GGYRCC 2 cut(s) 1034, 1177
BshVI ATCGAT 1 cut(s) 1208
BsiHKCI CYCGRG 1 cut(s) 1499
BsiSI CCGG 1 cut(s) 1241
BsiWI CGTACG 1 cut(s) 688
BslFI GGGAC 2 cut(s) 97, 1232
BslI CCNNNNNNNGG 6 cut(s) 81, 133, 990, 1484, 1490, 1574
BsmAI GTCTC 3 cut(s) 818, 1225, 1644
BsmBI CGTCTC 1 cut(s) 1225
BsmFI GGGAC 2 cut(s) 97, 1232
BsnI GGCC 8 cut(s) 366, 675, 714, 975, 1240, 1504, 1597, 1618
Bso31I GGTCTC 1 cut(s) 818
BsoBI CYCGRG 1 cut(s) 1499
Bsp1407I TGTACA 1 cut(s) 1075
Bsp143I GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
Bsp1720I GCTNAGC 1 cut(s) 162
BspACI CCGC 3 cut(s) 440, 577, 991
BspANI GGCC 8 cut(s) 366, 675, 714, 975, 1240, 1504, 1597, 1618
BspDI ATCGAT 1 cut(s) 1208
BspFNI CGCG 2 cut(s) 1137, 1290
BspHI TCATGA 1 cut(s) 1384
BspLI GGNNCC 9 cut(s) 85, 352, 471, 667, 844, 1036, 1179, 1603, 1659
BspPI GGATC 7 cut(s) 345, 358, 524, 914, 974, 1652, 1665
BspT107I GGYRCC 2 cut(s) 1034, 1177
BspTNI GGTCTC 1 cut(s) 818
BsrDI GCAATG 1 cut(s) 1539
BsrGI TGTACA 1 cut(s) 1075
BsrI ACTGG 7 cut(s) 44, 85, 518, 676, 738, 1116, 1351
BssECI CCNNGG 5 cut(s) 354, 367, 924, 942, 1038
BssMI GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
BssNAI GTATAC 1 cut(s) 542
BssNI GRCGYC 1 cut(s) 1178
BssT1I CCWWGG 4 cut(s) 354, 924, 942, 1038
Bst1107I GTATAC 1 cut(s) 542
Bst2UI CCWGG 4 cut(s) 369, 1182, 1485, 1599
Bst4CI ACNGT 1 cut(s) 283
Bst6I CTCTTC 1 cut(s) 231
BstACI GRCGYC 1 cut(s) 1178
BstAPI GCANNNNNTGC 1 cut(s) 1543
BstAUI TGTACA 1 cut(s) 1075
BstC8I GCNNGC 4 cut(s) 153, 213, 1428, 1620
BstF5I GGATG 8 cut(s) 123, 262, 448, 792, 1009, 1049, 1123, 1428
BstFNI CGCG 2 cut(s) 1137, 1290
BstH2I RGCGCY 1 cut(s) 1181
BstHHI GCGC 4 cut(s) 168, 762, 1137, 1180
BstKTI GATC 6 cut(s) 353, 490, 532, 922, 982, 1660
BstMAI GTCTC 3 cut(s) 818, 1225, 1644
BstMBI GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
BstMWI GCNNNNNNNGC 3 cut(s) 340, 509, 1543
BstNI CCWGG 4 cut(s) 369, 1182, 1485, 1599
BstNSI RCATGY 2 cut(s) 824, 1430
BstPAI GACNNNNGTC 1 cut(s) 704
BstSCI CCNGG 5 cut(s) 367, 1180, 1240, 1483, 1597
BstUI CGCG 2 cut(s) 1137, 1290
BstV1I GCAGC 4 cut(s) 946, 949, 1051, 1213
BstV2I GAAGAC 1 cut(s) 460
BstX2I RGATCY 4 cut(s) 350, 919, 979, 1657
BstXI CCANNNNNNTGG 1 cut(s) 1613
BstYI RGATCY 4 cut(s) 350, 919, 979, 1657
BstZ17I GTATAC 1 cut(s) 542
Bsu15I ATCGAT 1 cut(s) 1208
Bsu36I CCTNAGG 1 cut(s) 507
BsuRI GGCC 8 cut(s) 366, 675, 714, 975, 1240, 1504, 1597, 1618
BsuTUI ATCGAT 1 cut(s) 1208
BtrI CACGTC 1 cut(s) 53
BtsCI GGATG 8 cut(s) 123, 262, 448, 792, 1009, 1049, 1123, 1428
BtsI GCAGTG 1 cut(s) 1585
BtsIMutI CAGTG 4 cut(s) 78, 279, 669, 1585
Cac8I GCNNGC 4 cut(s) 153, 213, 1428, 1620
CciI TCATGA 1 cut(s) 1384
CfoI GCGC 4 cut(s) 168, 762, 1137, 1180
ClaI ATCGAT 1 cut(s) 1208
CseI GACGC 1 cut(s) 812
Csp6I GTAC 2 cut(s) 689, 1076
CspCI CAANNNNNGTGG 2 cut(s) 1452, 1487
CviAII CATG 8 cut(s) 461, 659, 767, 821, 1061, 1162, 1385, 1427
CviQI GTAC 2 cut(s) 689, 1076
DinI GGCGCC 1 cut(s) 1179
DpnI GATC 6 cut(s) 352, 489, 531, 921, 981, 1659
DpnII GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
Eam1104I CTCTTC 1 cut(s) 231
EarI CTCTTC 1 cut(s) 231
Eco130I CCWWGG 4 cut(s) 354, 924, 942, 1038
Eco147I AGGCCT 1 cut(s) 975
Eco31I GGTCTC 1 cut(s) 818
Eco32I GATATC 1 cut(s) 173
Eco47I GGWCC 6 cut(s) 84, 623, 1433, 1493, 1559, 1601
Eco57I CTGAAG 1 cut(s) 1545
Eco81I CCTNAGG 1 cut(s) 507
Eco88I CYCGRG 1 cut(s) 1499
EcoO109I RGGNCCY 1 cut(s) 712
EcoRI GAATTC 1 cut(s) 1346
EcoRII CCWGG 4 cut(s) 367, 1180, 1483, 1597
EcoRV GATATC 1 cut(s) 173
EcoT14I CCWWGG 4 cut(s) 354, 924, 942, 1038
EcoT22I ATGCAT 1 cut(s) 1428
EgeI GGCGCC 1 cut(s) 1179
EheI GGCGCC 1 cut(s) 1179
ErhI CCWWGG 4 cut(s) 354, 924, 942, 1038
Esp3I CGTCTC 1 cut(s) 1225
FaeI CATG 8 cut(s) 464, 662, 770, 824, 1064, 1165, 1388, 1430
FaqI GGGAC 2 cut(s) 97, 1232
FatI CATG 8 cut(s) 460, 658, 766, 820, 1060, 1161, 1384, 1426
FblI GTMKAC 1 cut(s) 541
Fnu4HI GCNGC 4 cut(s) 960, 963, 1065, 1202
FokI GGATG 8 cut(s) 110, 249, 455, 799, 1016, 1056, 1130, 1435
Fsp4HI GCNGC 4 cut(s) 960, 963, 1065, 1202
FspBI CTAG 3 cut(s) 408, 534, 977
GlaI GCGC 4 cut(s) 167, 761, 1136, 1179
GluI GCNGC 4 cut(s) 960, 963, 1065, 1202
GsuI CTGGAG 1 cut(s) 1626
HaeII RGCGCY 1 cut(s) 1181
HaeIII GGCC 8 cut(s) 366, 675, 714, 975, 1240, 1504, 1597, 1618
HapII CCGG 1 cut(s) 1241
HgaI GACGC 1 cut(s) 812
HhaI GCGC 4 cut(s) 168, 762, 1137, 1180
Hin1I GRCGYC 1 cut(s) 1178
Hin1II CATG 8 cut(s) 464, 662, 770, 824, 1064, 1165, 1388, 1430
Hin6I GCGC 4 cut(s) 166, 760, 1135, 1178
HinP1I GCGC 4 cut(s) 166, 760, 1135, 1178
HincII GTYRAC 1 cut(s) 550
HindII GTYRAC 1 cut(s) 550
HinfI GANTC 5 cut(s) 4, 12, 44, 587, 794
HpaII CCGG 1 cut(s) 1241
HphI GGTGA 4 cut(s) 77, 506, 1322, 1355
Hpy166II GTNNAC 6 cut(s) 413, 542, 550, 623, 1078, 1415
Hpy188I TCNGA 9 cut(s) 9, 207, 424, 529, 592, 847, 1281, 1330, 1450
Hpy188III TCNNGA 8 cut(s) 35, 48, 176, 399, 917, 1153, 1370, 1385
Hpy8I GTNNAC 6 cut(s) 413, 542, 550, 623, 1078, 1415
Hpy99I CGWCG 2 cut(s) 806, 1668
HpyAV CCTTC 4 cut(s) 37, 92, 1568, 1668
HpyCH4III ACNGT 1 cut(s) 283
HpyCH4IV ACGT 4 cut(s) 52, 538, 1234, 1666
HpyF10VI GCNNNNNNNGC 3 cut(s) 340, 509, 1543
HpySE526I ACGT 4 cut(s) 52, 538, 1234, 1666
Hsp92I GRCGYC 1 cut(s) 1178
Hsp92II CATG 8 cut(s) 464, 662, 770, 824, 1064, 1165, 1388, 1430
HspAI GCGC 4 cut(s) 166, 760, 1135, 1178
KasI GGCGCC 1 cut(s) 1177
Kzo9I GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
LmnI GCTCC 4 cut(s) 391, 508, 863, 1522
Lsp1109I GCAGC 4 cut(s) 946, 949, 1051, 1213
LweI GCATC 7 cut(s) 58, 427, 1034, 1108, 1159, 1413, 1464
MaeI CTAG 3 cut(s) 408, 534, 977
MaeII ACGT 4 cut(s) 52, 538, 1234, 1666
MalI GATC 6 cut(s) 352, 489, 531, 921, 981, 1659
MboI GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
MboII GAAGA 4 cut(s) 149, 248, 465, 1006
MflI RGATCY 4 cut(s) 350, 919, 979, 1657
MluCI AATT 9 cut(s) 119, 285, 418, 600, 881, 1070, 1346, 1405, 1626
Mly113I GGCGCC 1 cut(s) 1178
MlyI GAGTC 2 cut(s) 581, 803
MmeI TCCRAC 2 cut(s) 114, 1380
Mph1103I ATGCAT 1 cut(s) 1428
MseI TTAA 3 cut(s) 222, 1094, 1670
MslI CAYNNNNRTG 1 cut(s) 408
MspA1I CMGCKG 1 cut(s) 155
MspI CCGG 1 cut(s) 1241
MspR9I CCNGG 5 cut(s) 369, 1182, 1242, 1485, 1599
MvaI CCWGG 4 cut(s) 369, 1182, 1485, 1599
MvnI CGCG 2 cut(s) 1137, 1290
MwoI GCNNNNNNNGC 3 cut(s) 340, 509, 1543
NarI GGCGCC 1 cut(s) 1178
NciI CCSGG 1 cut(s) 1242
NdeII GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
NlaIII CATG 8 cut(s) 464, 662, 770, 824, 1064, 1165, 1388, 1430
NlaIV GGNNCC 9 cut(s) 85, 352, 471, 667, 844, 1036, 1179, 1603, 1659
NsiI ATGCAT 1 cut(s) 1428
NspI RCATGY 2 cut(s) 824, 1430
PaeI GCATGC 1 cut(s) 1430
PagI TCATGA 1 cut(s) 1384
PceI AGGCCT 1 cut(s) 975
PcsI WCGNNNNNNNCGW 1 cut(s) 1294
PfeI GAWTC 3 cut(s) 4, 12, 44
Pfl23II CGTACG 1 cut(s) 688
PflMI CCANNNNNTGG 1 cut(s) 133
PkrI GCNGC 4 cut(s) 961, 964, 1066, 1203
PleI GAGTC 2 cut(s) 581, 802
PluTI GGCGCC 1 cut(s) 1181
PpsI GAGTC 2 cut(s) 581, 802
PshAI GACNNNNGTC 1 cut(s) 704
Psp6I CCWGG 4 cut(s) 367, 1180, 1483, 1597
PspGI CCWGG 4 cut(s) 367, 1180, 1483, 1597
PspLI CGTACG 1 cut(s) 688
PspN4I GGNNCC 9 cut(s) 85, 352, 471, 667, 844, 1036, 1179, 1603, 1659
PsuI RGATCY 4 cut(s) 350, 919, 979, 1657
PvuII CAGCTG 1 cut(s) 155
RsaI GTAC 2 cut(s) 690, 1077
RsaNI GTAC 2 cut(s) 689, 1076
RseI CAYNNNNRTG 1 cut(s) 408
SaqAI TTAA 3 cut(s) 222, 1094, 1670
SatI GCNGC 4 cut(s) 960, 963, 1065, 1202
Sau3AI GATC 6 cut(s) 350, 487, 529, 919, 979, 1657
SchI GAGTC 2 cut(s) 581, 803
ScrFI CCNGG 5 cut(s) 369, 1182, 1242, 1485, 1599
SfaNI GCATC 7 cut(s) 58, 427, 1034, 1108, 1159, 1413, 1464
SfoI GGCGCC 1 cut(s) 1179
SinI GGWCC 6 cut(s) 84, 623, 1433, 1493, 1559, 1601
SmiMI CAYNNNNRTG 1 cut(s) 408
SmlI CTYRAG 2 cut(s) 716, 1088
SmoI CTYRAG 2 cut(s) 716, 1088
SpeI ACTAGT 1 cut(s) 407
SphI GCATGC 1 cut(s) 1430
Sse9I AATT 9 cut(s) 119, 285, 418, 600, 881, 1070, 1346, 1405, 1626
SseBI AGGCCT 1 cut(s) 975
SsiI CCGC 3 cut(s) 440, 577, 991
SspDI GGCGCC 1 cut(s) 1177
SspMI CTAG 3 cut(s) 408, 534, 977
StuI AGGCCT 1 cut(s) 975
StyD4I CCNGG 5 cut(s) 367, 1180, 1240, 1483, 1597
StyI CCWWGG 4 cut(s) 354, 924, 942, 1038
TaaI ACNGT 1 cut(s) 283
TaiI ACGT 4 cut(s) 55, 541, 1237, 1669
TaqI TCGA 3 cut(s) 1208, 1651, 1663
TasI AATT 9 cut(s) 119, 285, 418, 600, 881, 1070, 1346, 1405, 1626
TatI WGTACW 1 cut(s) 1075
TfiI GAWTC 3 cut(s) 4, 12, 44
Tru1I TTAA 3 cut(s) 222, 1094, 1670
Tru9I TTAA 3 cut(s) 222, 1094, 1670
TscAI CASTG 4 cut(s) 85, 286, 676, 1585
TseI GCWGC 4 cut(s) 959, 962, 1064, 1201
TspDTI ATGAA 9 cut(s) 17, 112, 315, 444, 656, 1020, 1049, 1178, 1404
TspGWI ACGGA 1 cut(s) 325
TspRI CASTG 4 cut(s) 85, 286, 676, 1585
Van91I CCANNNNNTGG 1 cut(s) 133
VpaK11BI GGWCC 6 cut(s) 84, 623, 1433, 1493, 1559, 1601
XapI RAATTY 3 cut(s) 418, 1070, 1346
XceI RCATGY 2 cut(s) 824, 1430
XmiI GTMKAC 1 cut(s) 541
XspI CTAG 3 cut(s) 408, 534, 977
Zsp2I ATGCAT 1 cut(s) 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.