Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr00

Orthogroup ID

OG0009142

Physical Location & Seq

Genomic Coordinates Reverse (-)

50801713 .. 50808375

Gene Structure 6663 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD00G1208600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

ATGGCGATGGAGGATGAACACCAACTAATGGCGATCCAGATATCTCCGGCGGATGCCAATGGGACCACTCCAGGGAAGGAGCAGCAGGCCGCTGGGGTTGGCATTCTTCTCCAGATCATGATGCTTGTCCTCTCTTTCGTCCTTGGCCATGTCCTTCGCCGCCACAAATTCTACTATCTTCCTGAGGCCAGCGCTTCTCTTTTAATTGGCTTAATTGTAGGTGGACTTGCTAGCATTTCTAATACGGAAAATAGCATCAGGGCCTGGTTTAACTTCCATGAGGAATTTTTCTTCCTATTCCTCTTACCTCCTATCATATTTCAGTCGGGCTTCAGTCTCTCACCTAAGCCTTTCTTCTCCAACTTTGGAGCCATTGTCACCTTTGCTATCCTAGGAACCTTTATAGCTTCCGTTGTTACTGGTATTCTAGTTTACCTTGGTGGTCTAATATACCTCACCTACAGACTTCCATTTGTGGAGTGCTTGATGTTTGGTGCACTTATATCAGCAACTGATCCAGTCACCGTCTTGTCCATCTTTCAGGAACTTGGCACAGATATGAACCTGTATGCTCTGGTGTTTGGAGAATCTGTTTTGAATGATGTCATTGACCTTGTGTACGTTATGAAATTGTTGGATTGTATGCCCGCCAATCAACAGATGGCAATTTCCTTGTACAGGACAATGTCCTTAGTAAGAAGTCACGCAACATCTGGAGAGAACTTCTTCATGGTTGTTGTCAGGTTTCTTGAGACCTTTGTGGGTTCCTTGTCTGCAGGGTTGGATATTGACAATCTACAAAACTTGGAGTGCTGTCTTTTTGTCCTCTTTCCATATTTCTCTTACATGCTTGCGGAAGGTCTTGGCCTGTCTGGTATTGTATCAATATTGTTCACAGGAATGCATTACACGTATTCAAATTTATCAGAAAACTCTCAAAGATTTGCTTCTTCCTTTTTCCATTTGATATCATCACTAGCGGAGACATTTGTGTTTATATACATGGGCTTTGATATTGCCATGGAACAACATAGCTGGTCGCATGTGGGGTTCATTTTTTTTTCAATTATATTTATTGTAGTTGCAAGGGCAGCTAATGTTTTTTCTTGTGTGTATTTGGTTAACTTGGTTCGACCTGCACACAGACAGATACCTTTAAAACACCAGAAGGCACTTTGGTACGGTGGACTTCGAGGGGCCATGGCATTTGCCCTCGCTCTGCAATCAGTTCATGATCTCCCAGAAGGACACGGCCAGACTATATTCACTGCAACCACTGCCATAGTGGTTCTGACGGTGTTATTAATTGGAGGTTCAACCGGTACCATGCTGGAAGCTTTACAAGTAGTAGGTGATGGCATTGAGGGTACTTTGGGTGAAAGTTTCGAAGGGAACAATGGCTATATTGCACCATCTTATAATGACGAAGGATCATCGGGGAACAGGATCAAGATGAAACTGAAGGAATTCCATCAGAGCACAGCGTCATTCACAGCTTTAGATCGAAACTACCTCACGCCATTCTTTACAAGTCAGAATGGTGATGAAGAGGATGAGCTTGATGAGCCAATGCCTGGCTCTACAAGAGGGGGTTTCCATGGCCATGGCCAACAGTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0008150 GO:0008324 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031410 GO:0031982 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0097708 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

540

Amino Acids

59.28

Weight (kDa)

5.08

Isoelectric Point (pI)

40.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	46 - 445	1.6e-53	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54370 AT1G79610
fragaria_vesca	FvH4_3g00030 FvH4_3g00030 FvH4_3g00030
malus_domestica	MD00G1208600.v1.1 MD10G1342600.v1.1
prunus_persica	Prupe.4G000200_v2.0.a1 Prupe.4G000200_v2.0.a1
pyrus_communis	pycom10g29190
rosa_chinensis	RchiOBHm_Chr5g0000031 RchiOBHm_Chr5g0000041
rosa_laevigata	RLG00000030836
rosa_multiflora	Rmu_ssc0000243.1_g000029
rosa_roxburghii	Rroxscaffold_1G00076030 Rroxscaffold_2G00107680
rosa_rugosa	Rorug04G0380800
rosa_samantha	Rh5AG000400 Rh5BG001600 Rh5CG000400 Rh5DG000400
rosa_wichuraiana	Rw5G000070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1419
Acc36I	ACCTGC	1 cut(s)	1144
Acc65I	GGTACC	1 cut(s)	1322
AccB1I	GGYRCC	1 cut(s)	1322
AccB7I	CCANNNNNTGG	2 cut(s)	28, 1574
AciI	CCGC	6 cut(s)	50, 90, 160, 648, 854, 980
AclWI	GGATC	4 cut(s)	28, 509, 1438, 1454
AcoI	YGGCCR	4 cut(s)	145, 1252, 1600, 1606
AcsI	RAATTY	4 cut(s)	167, 284, 919, 1466
AcuI	CTGAAG	2 cut(s)	316, 1481
AfaI	GTAC	5 cut(s)	620, 677, 1181, 1324, 1369
AfeI	AGCGCT	1 cut(s)	193
AfiI	CCNNNNNNNGG	4 cut(s)	28, 72, 678, 1574
AflIII	ACRYGT	1 cut(s)	909
AgeI	ACCGGT	1 cut(s)	1319
AgsI	TTSAA	4 cut(s)	598, 918, 1065, 1317
AjnI	CCWGG	3 cut(s)	70, 263, 1573
AluBI	AGCT	6 cut(s)	407, 1035, 1094, 1337, 1496, 1558
AluI	AGCT	6 cut(s)	407, 1035, 1094, 1337, 1496, 1558
Alw21I	GWGCWC	2 cut(s)	499, 1481
Alw26I	GTCTC	3 cut(s)	341, 746, 977
Alw44I	GTGCAC	1 cut(s)	495
AlwI	GGATC	4 cut(s)	28, 509, 1438, 1454
AlwNI	CAGNNNCTG	2 cut(s)	264, 512
Aor51HI	AGCGCT	1 cut(s)	193
AoxI	GGCC	9 cut(s)	87, 145, 186, 261, 865, 1197, 1252, 1600, 1606
ApaLI	GTGCAC	1 cut(s)	495
ApeKI	GCWGC	2 cut(s)	82, 1091
ApoI	RAATTY	4 cut(s)	167, 284, 919, 1466
AseI	ATTAAT	1 cut(s)	1304
AsiGI	ACCGGT	1 cut(s)	1319
Asp700I	GAANNNNTTC	2 cut(s)	725, 1466
Asp718I	GGTACC	1 cut(s)	1322
AspA2I	CCTAGG	1 cut(s)	391
AspLEI	GCGC	1 cut(s)	194
AspS9I	GGNCC	3 cut(s)	63, 261, 1197
AsuHPI	GGTGA	7 cut(s)	333, 370, 448, 514, 1364, 1388, 1553
AsuII	TTCGAA	1 cut(s)	1386
AsuNHI	GCTAGC	1 cut(s)	230
AvaII	GGWCC	1 cut(s)	63
AvrII	CCTAGG	1 cut(s)	391
AxyI	CCTNAGG	1 cut(s)	183
BaeGI	GKGCMC	1 cut(s)	499
BalI	TGGCCA	3 cut(s)	147, 1602, 1608
BanI	GGYRCC	1 cut(s)	1322
Bbv12I	GWGCWC	2 cut(s)	499, 1481
BbvI	GCAGC	2 cut(s)	94, 1103
BccI	CCATC	5 cut(s)	542, 655, 1349, 1420, 1479
BceAI	ACGGC	1 cut(s)	1267
BciT130I	CCWGG	3 cut(s)	72, 265, 1575
BcoDI	GTCTC	3 cut(s)	341, 746, 977
BfaI	CTAG	4 cut(s)	231, 392, 428, 977
BfmI	CTRYAG	2 cut(s)	460, 774
BfoI	RGCGCY	1 cut(s)	195
BfuAI	ACCTGC	1 cut(s)	1144
BisI	GCNGC	4 cut(s)	83, 90, 160, 1092
BlnI	CCTAGG	1 cut(s)	391
BlsI	GCNGC	4 cut(s)	84, 91, 161, 1093
Bme1390I	CCNGG	3 cut(s)	72, 265, 1575
Bme18I	GGWCC	1 cut(s)	63
BmgT120I	GGNCC	3 cut(s)	63, 261, 1197
BmiI	GGNNCC	6 cut(s)	64, 370, 397, 766, 1198, 1324
BmrFI	CCNGG	3 cut(s)	72, 265, 1575
BmsI	GCATC	3 cut(s)	43, 111, 264
BmtI	GCTAGC	1 cut(s)	234
BpmI	CTGGAG	3 cut(s)	54, 95, 735
Bpu10I	CCTNAGC	1 cut(s)	345
Bpu14I	TTCGAA	1 cut(s)	1386
BpuEI	CTTGAG	1 cut(s)	770
BsaAI	YACGTR	1 cut(s)	912
BsaI	GGTCTC	1 cut(s)	746
BsaJI	CCNNGG	8 cut(s)	71, 142, 391, 436, 1020, 1200, 1597, 1603
BsaWI	WCCGGW	1 cut(s)	1319
BsaXI	ACNNNNNCTCC	4 cut(s)	360, 390, 576, 606
Bsc4I	CCNNNNNNNGG	4 cut(s)	28, 72, 678, 1574
Bse118I	RCCGGY	1 cut(s)	1319
Bse1I	ACTGG	2 cut(s)	424, 518
Bse21I	CCTNAGG	1 cut(s)	183
BseBI	CCWGG	3 cut(s)	72, 265, 1575
BseDI	CCNNGG	8 cut(s)	71, 142, 391, 436, 1020, 1200, 1597, 1603
BseGI	GGATG	3 cut(s)	19, 58, 1558
BseLI	CCNNNNNNNGG	4 cut(s)	28, 72, 678, 1574
BseMII	CTCAG	1 cut(s)	174
BseNI	ACTGG	2 cut(s)	424, 518
BseSI	GKGCMC	1 cut(s)	499
BseXI	GCAGC	2 cut(s)	94, 1103
BseYI	CCCAGC	1 cut(s)	92
BsgI	GTGCAG	1 cut(s)	1122
BshFI	GGCC	9 cut(s)	89, 147, 188, 263, 867, 1199, 1254, 1602, 1608
BshNI	GGYRCC	1 cut(s)	1322
BshTI	ACCGGT	1 cut(s)	1319
BsiHKAI	GWGCWC	2 cut(s)	499, 1481
BsiSI	CCGG	2 cut(s)	47, 1320
BslFI	GGGAC	1 cut(s)	76
BslI	CCNNNNNNNGG	4 cut(s)	28, 72, 678, 1574
BsmAI	GTCTC	3 cut(s)	341, 746, 977
BsmFI	GGGAC	1 cut(s)	76
BsmI	GAATGC	2 cut(s)	102, 906
BsnI	GGCC	9 cut(s)	89, 147, 188, 263, 867, 1199, 1254, 1602, 1608
Bso31I	GGTCTC	1 cut(s)	746
Bsp119I	TTCGAA	1 cut(s)	1386
Bsp1286I	GDGCHC	2 cut(s)	499, 1481
Bsp1407I	TGTACA	1 cut(s)	675
Bsp143I	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
Bsp19I	CCATGG	4 cut(s)	1020, 1200, 1597, 1603
BspACI	CCGC	6 cut(s)	50, 90, 160, 648, 854, 980
BspANI	GGCC	9 cut(s)	89, 147, 188, 263, 867, 1199, 1254, 1602, 1608
BspCNI	CTCAG	1 cut(s)	175
BspHI	TCATGA	2 cut(s)	117, 1231
BspLI	GGNNCC	6 cut(s)	64, 370, 397, 766, 1198, 1324
BspMAI	CTGCAG	1 cut(s)	778
BspMI	ACCTGC	1 cut(s)	1144
BspOI	GCTAGC	1 cut(s)	234
BspPI	GGATC	4 cut(s)	28, 509, 1438, 1454
BspT104I	TTCGAA	1 cut(s)	1386
BspT107I	GGYRCC	1 cut(s)	1322
BspTNI	GGTCTC	1 cut(s)	746
BsrFI	RCCGGY	1 cut(s)	1319
BsrGI	TGTACA	1 cut(s)	675
BsrI	ACTGG	2 cut(s)	424, 518
BssAI	RCCGGY	1 cut(s)	1319
BssECI	CCNNGG	8 cut(s)	71, 142, 391, 436, 1020, 1200, 1597, 1603
BssMI	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
BssT1I	CCWWGG	7 cut(s)	142, 391, 436, 1020, 1200, 1597, 1603
Bst2UI	CCWGG	3 cut(s)	72, 265, 1575
Bst4CI	ACNGT	4 cut(s)	526, 1184, 1297, 1614
Bst6I	CTCTTC	1 cut(s)	1542
BstAPI	GCANNNNNTGC	1 cut(s)	1277
BstAUI	TGTACA	1 cut(s)	675
BstBAI	YACGTR	1 cut(s)	912
BstBI	TTCGAA	1 cut(s)	1386
BstC8I	GCNNGC	5 cut(s)	87, 190, 232, 648, 852
BstDEI	CTNAG	3 cut(s)	183, 345, 691
BstDSI	CCRYGG	4 cut(s)	1020, 1200, 1597, 1603
BstENI	CCTNNNNNAGG	1 cut(s)	676
BstF5I	GGATG	3 cut(s)	19, 58, 1558
BstH2I	RGCGCY	1 cut(s)	195
BstHHI	GCGC	1 cut(s)	194
BstKTI	GATC	7 cut(s)	36, 117, 517, 1237, 1433, 1449, 1504
BstMAI	GTCTC	3 cut(s)	341, 746, 977
BstMBI	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
BstMWI	GCNNNNNNNGC	3 cut(s)	1091, 1277, 1564
BstNI	CCWGG	3 cut(s)	72, 265, 1575
BstNSI	RCATGY	2 cut(s)	850, 1046
BstSCI	CCNGG	3 cut(s)	70, 263, 1573
BstSFI	CTRYAG	2 cut(s)	460, 774
BstSLI	GKGCMC	1 cut(s)	499
BstV1I	GCAGC	2 cut(s)	94, 1103
BstXI	CCANNNNNNTGG	1 cut(s)	1604
Bsu36I	CCTNAGG	1 cut(s)	183
BsuRI	GGCC	9 cut(s)	89, 147, 188, 263, 867, 1199, 1254, 1602, 1608
BtgI	CCRYGG	4 cut(s)	1020, 1200, 1597, 1603
BtgZI	GCGATG	1 cut(s)	20
BtsCI	GGATG	3 cut(s)	19, 58, 1558
BtsI	GCAGTG	2 cut(s)	1266, 1275
BtsIMutI	CAGTG	2 cut(s)	1266, 1275
BveI	ACCTGC	1 cut(s)	1144
Cac8I	GCNNGC	5 cut(s)	87, 190, 232, 648, 852
CaiI	CAGNNNCTG	2 cut(s)	264, 512
CciI	TCATGA	2 cut(s)	117, 1231
CfoI	GCGC	1 cut(s)	194
Cfr10I	RCCGGY	1 cut(s)	1319
Cfr13I	GGNCC	3 cut(s)	63, 261, 1197
CseI	GACGC	1 cut(s)	1473
Csp6I	GTAC	5 cut(s)	619, 676, 1180, 1323, 1368
CspAI	ACCGGT	1 cut(s)	1319
CviQI	GTAC	5 cut(s)	619, 676, 1180, 1323, 1368
DdeI	CTNAG	3 cut(s)	183, 345, 691
DpnI	GATC	7 cut(s)	35, 116, 516, 1236, 1432, 1448, 1503
DpnII	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
DraI	TTTAAA	1 cut(s)	1158
EaeI	YGGCCR	4 cut(s)	145, 1252, 1600, 1606
Eam1104I	CTCTTC	1 cut(s)	1542
EarI	CTCTTC	1 cut(s)	1542
EciI	GGCGGA	1 cut(s)	65
Eco130I	CCWWGG	7 cut(s)	142, 391, 436, 1020, 1200, 1597, 1603
Eco31I	GGTCTC	1 cut(s)	746
Eco32I	GATATC	2 cut(s)	42, 969
Eco47I	GGWCC	1 cut(s)	63
Eco47III	AGCGCT	1 cut(s)	193
Eco57I	CTGAAG	2 cut(s)	316, 1481
Eco81I	CCTNAGG	1 cut(s)	183
EcoNI	CCTNNNNNAGG	1 cut(s)	676
EcoO109I	RGGNCCY	1 cut(s)	261
EcoRI	GAATTC	1 cut(s)	1466
EcoRII	CCWGG	3 cut(s)	70, 263, 1573
EcoRV	GATATC	2 cut(s)	42, 969
EcoT14I	CCWWGG	7 cut(s)	142, 391, 436, 1020, 1200, 1597, 1603
EcoT22I	ATGCAT	1 cut(s)	906
ErhI	CCWWGG	7 cut(s)	142, 391, 436, 1020, 1200, 1597, 1603
FalI	AAGNNNNNCTT	4 cut(s)	338, 370, 931, 963
FaqI	GGGAC	1 cut(s)	76
FauI	CCCGC	1 cut(s)	655
Fnu4HI	GCNGC	4 cut(s)	83, 90, 160, 1092
FokI	GGATG	3 cut(s)	26, 65, 1565
Fsp4HI	GCNGC	4 cut(s)	83, 90, 160, 1092
FspBI	CTAG	4 cut(s)	231, 392, 428, 977
GlaI	GCGC	1 cut(s)	193
GluI	GCNGC	4 cut(s)	83, 90, 160, 1092
GsaI	CCCAGC	1 cut(s)	96
GsuI	CTGGAG	3 cut(s)	54, 95, 735
HaeII	RGCGCY	1 cut(s)	195
HaeIII	GGCC	9 cut(s)	89, 147, 188, 263, 867, 1199, 1254, 1602, 1608
HapII	CCGG	2 cut(s)	47, 1320
HgaI	GACGC	1 cut(s)	1473
HhaI	GCGC	1 cut(s)	194
Hin6I	GCGC	1 cut(s)	192
HinP1I	GCGC	1 cut(s)	192
HincII	GTYRAC	1 cut(s)	1123
HindII	GTYRAC	1 cut(s)	1123
HindIII	AAGCTT	1 cut(s)	1335
HinfI	GANTC	1 cut(s)	587
HpaI	GTTAAC	1 cut(s)	1123
HpaII	CCGG	2 cut(s)	47, 1320
HphI	GGTGA	7 cut(s)	333, 370, 448, 514, 1364, 1388, 1553
Hpy166II	GTNNAC	7 cut(s)	224, 433, 497, 619, 894, 1123, 1187
Hpy188I	TCNGA	4 cut(s)	928, 1293, 1476, 1536
Hpy8I	GTNNAC	7 cut(s)	224, 433, 497, 619, 894, 1123, 1187
HpyAV	CCTTC	8 cut(s)	70, 164, 851, 1162, 1238, 1382, 1421, 1456
HpyCH4III	ACNGT	4 cut(s)	526, 1184, 1297, 1614
HpyCH4IV	ACGT	2 cut(s)	621, 911
HpyCH4V	TGCA	8 cut(s)	497, 776, 904, 1085, 1139, 1222, 1271, 1409
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1091, 1277, 1564
HpyF3I	CTNAG	3 cut(s)	183, 345, 691
HpySE526I	ACGT	2 cut(s)	621, 911
HspAI	GCGC	1 cut(s)	192
KpnI	GGTACC	1 cut(s)	1326
KspAI	GTTAAC	1 cut(s)	1123
Kzo9I	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
LmnI	GCTCC	2 cut(s)	79, 368
Lsp1109I	GCAGC	2 cut(s)	94, 1103
LweI	GCATC	3 cut(s)	43, 111, 264
MaeI	CTAG	4 cut(s)	231, 392, 428, 977
MaeII	ACGT	2 cut(s)	621, 911
MaeIII	GTNAC	4 cut(s)	376, 415, 520, 701
MalI	GATC	7 cut(s)	35, 116, 516, 1236, 1432, 1448, 1503
MboI	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
MboII	GAAGA	7 cut(s)	98, 170, 283, 346, 718, 942, 1559
MhlI	GDGCHC	2 cut(s)	499, 1481
MlsI	TGGCCA	3 cut(s)	147, 1602, 1608
MluNI	TGGCCA	3 cut(s)	147, 1602, 1608
MmeI	TCCRAC	3 cut(s)	384, 615, 762
Mox20I	TGGCCA	3 cut(s)	147, 1602, 1608
Mph1103I	ATGCAT	1 cut(s)	906
MroXI	GAANNNNTTC	2 cut(s)	725, 1466
MscI	TGGCCA	3 cut(s)	147, 1602, 1608
MseI	TTAA	6 cut(s)	203, 212, 270, 1122, 1157, 1304
MslI	CAYNNNNRTG	3 cut(s)	557, 899, 1602
Msp20I	TGGCCA	3 cut(s)	147, 1602, 1608
MspA1I	CMGCKG	1 cut(s)	92
MspI	CCGG	2 cut(s)	47, 1320
MspR9I	CCNGG	3 cut(s)	72, 265, 1575
Mva1269I	GAATGC	2 cut(s)	102, 906
MvaI	CCWGG	3 cut(s)	72, 265, 1575
MwoI	GCNNNNNNNGC	3 cut(s)	1091, 1277, 1564
NcoI	CCATGG	4 cut(s)	1020, 1200, 1597, 1603
NdeII	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
NheI	GCTAGC	1 cut(s)	230
NlaIV	GGNNCC	6 cut(s)	64, 370, 397, 766, 1198, 1324
NmuCI	GTSAC	3 cut(s)	376, 520, 701
NsiI	ATGCAT	1 cut(s)	906
NspI	RCATGY	2 cut(s)	850, 1046
NspV	TTCGAA	1 cut(s)	1386
PagI	TCATGA	2 cut(s)	117, 1231
PctI	GAATGC	2 cut(s)	102, 906
PdmI	GAANNNNTTC	2 cut(s)	725, 1466
PfeI	GAWTC	1 cut(s)	587
PflFI	GACNNNGTC	1 cut(s)	685
PflMI	CCANNNNNTGG	2 cut(s)	28, 1574
PinAI	ACCGGT	1 cut(s)	1319
PkrI	GCNGC	4 cut(s)	84, 91, 161, 1093
Ppu21I	YACGTR	1 cut(s)	912
PshBI	ATTAAT	1 cut(s)	1304
PsiI	TTATAA	1 cut(s)	1419
Psp6I	CCWGG	3 cut(s)	70, 263, 1573
PspFI	CCCAGC	1 cut(s)	92
PspGI	CCWGG	3 cut(s)	70, 263, 1573
PspN4I	GGNNCC	6 cut(s)	64, 370, 397, 766, 1198, 1324
PspPI	GGNCC	3 cut(s)	63, 261, 1197
PstI	CTGCAG	1 cut(s)	778
PstNI	CAGNNNCTG	2 cut(s)	264, 512
PsyI	GACNNNGTC	1 cut(s)	685
RsaI	GTAC	5 cut(s)	620, 677, 1181, 1324, 1369
RsaNI	GTAC	5 cut(s)	619, 676, 1180, 1323, 1368
RseI	CAYNNNNRTG	3 cut(s)	557, 899, 1602
SaqAI	TTAA	6 cut(s)	203, 212, 270, 1122, 1157, 1304
SatI	GCNGC	4 cut(s)	83, 90, 160, 1092
Sau3AI	GATC	7 cut(s)	33, 114, 514, 1234, 1430, 1446, 1501
Sau96I	GGNCC	3 cut(s)	63, 261, 1197
ScrFI	CCNGG	3 cut(s)	72, 265, 1575
SduI	GDGCHC	2 cut(s)	499, 1481
SfaNI	GCATC	3 cut(s)	43, 111, 264
SfcI	CTRYAG	2 cut(s)	460, 774
SfuI	TTCGAA	1 cut(s)	1386
SinI	GGWCC	1 cut(s)	63
SmiMI	CAYNNNNRTG	3 cut(s)	557, 899, 1602
SmlI	CTYRAG	1 cut(s)	749
SmoI	CTYRAG	1 cut(s)	749
SsiI	CCGC	6 cut(s)	50, 90, 160, 648, 854, 980
SspI	AATATT	1 cut(s)	888
SspMI	CTAG	4 cut(s)	231, 392, 428, 977
StyD4I	CCNGG	3 cut(s)	70, 263, 1573
StyI	CCWWGG	7 cut(s)	142, 391, 436, 1020, 1200, 1597, 1603
TaaI	ACNGT	4 cut(s)	526, 1184, 1297, 1614
TaiI	ACGT	2 cut(s)	624, 914
TaqI	TCGA	4 cut(s)	1132, 1192, 1386, 1504
TatI	WGTACW	1 cut(s)	675
TauI	GCSGC	2 cut(s)	92, 162
TfiI	GAWTC	1 cut(s)	587
Tru1I	TTAA	6 cut(s)	203, 212, 270, 1122, 1157, 1304
Tru9I	TTAA	6 cut(s)	203, 212, 270, 1122, 1157, 1304
TscAI	CASTG	2 cut(s)	1273, 1282
TseFI	GTSAC	3 cut(s)	376, 520, 701
TseI	GCWGC	2 cut(s)	82, 1091
Tsp45I	GTSAC	3 cut(s)	376, 520, 701
TspDTI	ATGAA	8 cut(s)	30, 575, 641, 718, 1042, 1220, 1469, 1560
TspGWI	ACGGA	2 cut(s)	260, 400
TspRI	CASTG	2 cut(s)	1273, 1282
Tth111I	GACNNNGTC	1 cut(s)	685
Van91I	CCANNNNNTGG	2 cut(s)	28, 1574
VneI	GTGCAC	1 cut(s)	495
VpaK11BI	GGWCC	1 cut(s)	63
VspI	ATTAAT	1 cut(s)	1304
XagI	CCTNNNNNAGG	1 cut(s)	676
XapI	RAATTY	4 cut(s)	167, 284, 919, 1466
XceI	RCATGY	2 cut(s)	850, 1046
XcmI	CCANNNNNNNNNTGG	2 cut(s)	658, 1282
XmaJI	CCTAGG	1 cut(s)	391
XmnI	GAANNNNTTC	2 cut(s)	725, 1466
XspI	CTAG	4 cut(s)	231, 392, 428, 977
Zsp2I	ATGCAT	1 cut(s)	906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.