Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0009142

Physical Location & Seq

Genomic Coordinates Reverse (-)

46433 .. 53372

Gene Structure 6940 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG000400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1611 bp

ATGGACGACCAACACCAGCTGATGGCGATGCAGATATCACCGGCCGATTCCAATGGTACCACTCCGGCCAAGGAGCAGCAGGCCGCCGGAGTTGGCATTCTTCTCCAGATCATGATGCTCGTCCTCTCTTTTGTCCTAGGTCATGTCCTCCGCCGCCACAAATTCTATTATCTCCCCGAGGCCAGCGCTTCGCTTTTGATAGGTTTAATTGTTGGTGGACTTGCTAACATCTCTGATACCGAAACTAGCATCAGGGCCTGGTTCAATTTTCACGAGGAGTTCTTCTTTCTCTTCCTTTTACCTCCCATCATATTTCAGTCTGGCTTCAGTCTTTCACCTAAACCTTTCTTCTCTAACTTTGGAGCCATTGTCACTTTCGCTATCCTTGGAACCTTTATAGCTTCTGTTGTCACTGGTGTTCTAGTTTACCTTGGCGGTCTGATGTACCTCACCTACAGACTTCCATTTGTGGAGTGCTTGATGTTTGGTGCTCTTATATCAGCGACCGATCCAGTCACTGTCTTGTCCATCTTTCAGGAACTTGGCACAGATATGAACTTGTATGCTCTGGTGTTTGGGGAATCTGTTTTGAATGATGCGATGGCAATTTCCTTGTACAGGACGATGTCCCTGGTCAGGAGTCATGCATCATCTGGAGAAAACTTCTTCATGGTTATCGTCAGGTTTCTTGAGACCTTTGTCGGTTCAATGTCTGCAGGCATCGGAGTTGGCTTTACTTCTGCTTTGCTTTTCAAGTATGCAGGGTTGGATATTGACAATCTTCAGAACTTGGAGTGCTGTCTTTTTGTCCTTTTCCCATATTTCTCGTACATGCTTGCAGAAGGTCTTGGGCTCTCTGGTATTGTGTCAATATTGTTCACAGGAATGGTCATGAAGCATTACACGTATTCAAATTTGTCAGAGAACTCTCAACGATTTGTTTCAGCCTTTTTCCATTTGATCTCATCACTAGCAGAGACATTTGTATTTATATACATGGGCTTTGATATCGCTATGGAAAAGCATAGCTGGTCACATGTTGGATTCATTTTTTTCTCAATTATATTTATTGGAGTAGCAAGGGCAGTTAATGTTTTTTCTTGTGCATATTTGGTCAACTTATCTCGACCTTCACATAGACAGATACCAGTAAAACATCAAAAAGCACTTTGGTACAGTGGACTTCGAGGGGCCATGGCTTTTGCCCTCGCTCTGCAATCAGTTCATGATCTTCCAGAAGGACATGGTCAGACTATATTCACTGCAACTACTGCGATAGTTGTTCTGACGGTATTATTAATTGGAGGTTCAACGGGTACAATGCTGGAAGCTTTACAAGTTGTAGGTGATGAGAGTACATTGGGTGAAAGCTTTGATGGTAACAATGGTTACGTGGCTCCTTCTTATGACGATGACGAGGAAGGATCATCAGGAAACAGGATCAAGATGAAACTGAAGGAATTCCACAAGAGTGCAGCTTCATTCACAGCTTTGGATCGAAACTATCTCACCCCGTTCTTTACAAGTCAGAATGGCGATGAAGCAGAAGAGTTTGATGAGCCTGTGTCTAGCTCTACAAGACCAGTTGGTGGTTTCCACGGTCATGGCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006873 GO:0006885 GO:0008150 GO:0008324 GO:0009987 GO:0012505 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015081 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015385 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0019725 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030641 GO:0031410 GO:0031982 GO:0034220 GO:0035725 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0044424 GO:0044444 GO:0044464 GO:0046873 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071944 GO:0097708 GO:0098655 GO:0098657 GO:0098659 GO:0098660 GO:0098662 GO:0098719 GO:0098739 GO:0098771 GO:0099516 GO:0099587 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Na_H_Exchanger

Protein Analysis

536

Amino Acids

58.79

Weight (kDa)

5.26

Isoelectric Point (pI)

41.5

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Na_H_Exchanger	PF00999	44 - 443	1.5e-64	Sodium/hydrogen exchanger, transmembrane

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G54370 AT1G79610
fragaria_vesca	FvH4_3g00030 FvH4_3g00030 FvH4_3g00030
malus_domestica	MD00G1208600.v1.1 MD10G1342600.v1.1
prunus_persica	Prupe.4G000200_v2.0.a1 Prupe.4G000200_v2.0.a1
pyrus_communis	pycom10g29190
rosa_chinensis	RchiOBHm_Chr5g0000031 RchiOBHm_Chr5g0000041
rosa_laevigata	RLG00000030836
rosa_multiflora	Rmu_ssc0000243.1_g000029
rosa_roxburghii	Rroxscaffold_1G00076030 Rroxscaffold_2G00107680
rosa_rugosa	Rorug04G0380800
rosa_samantha	Rh5AG000400 Rh5BG001600 Rh5CG000400 Rh5DG000400
rosa_wichuraiana	Rw5G000070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	56
AccB1I	GGYRCC	1 cut(s)	56
AccB7I	CCANNNNNTGG	2 cut(s)	22, 1589
AciI	CCGC	4 cut(s)	84, 151, 154, 435
AclWI	GGATC	4 cut(s)	503, 1432, 1448, 1503
AcoI	YGGCCR	2 cut(s)	42, 66
AcsI	RAATTY	3 cut(s)	161, 913, 1460
AcuI	CTGAAG	3 cut(s)	310, 767, 1475
AfaI	GTAC	7 cut(s)	58, 446, 617, 830, 1175, 1318, 1357
AfeI	AGCGCT	1 cut(s)	187
AfiI	CCNNNNNNNGG	4 cut(s)	22, 618, 636, 1589
AflIII	ACRYGT	2 cut(s)	903, 1036
AgsI	TTSAA	6 cut(s)	265, 592, 708, 754, 912, 1311
AjnI	CCWGG	2 cut(s)	257, 630
AleI	CACNNNNGTG	1 cut(s)	1470
AluBI	AGCT	8 cut(s)	19, 401, 1029, 1331, 1371, 1478, 1490, 1572
AluI	AGCT	8 cut(s)	19, 401, 1029, 1331, 1371, 1478, 1490, 1572
Alw21I	GWGCWC	1 cut(s)	493
Alw26I	GTCTC	2 cut(s)	686, 971
AlwI	GGATC	4 cut(s)	503, 1432, 1448, 1503
AlwNI	CAGNNNCTG	2 cut(s)	258, 518
Ama87I	CYCGRG	1 cut(s)	176
Aor51HI	AGCGCT	1 cut(s)	187
AoxI	GGCC	6 cut(s)	42, 66, 81, 180, 255, 1191
ApeKI	GCWGC	2 cut(s)	76, 1475
ApoI	RAATTY	3 cut(s)	161, 913, 1460
AseI	ATTAAT	1 cut(s)	1298
Asp700I	GAANNNNTTC	1 cut(s)	1460
Asp718I	GGTACC	1 cut(s)	56
AspA2I	CCTAGG	1 cut(s)	136
AspLEI	GCGC	1 cut(s)	188
AspS9I	GGNCC	2 cut(s)	255, 1191
AsuHPI	GGTGA	6 cut(s)	30, 327, 442, 1358, 1376, 1501
AvaI	CYCGRG	1 cut(s)	176
AvrII	CCTAGG	1 cut(s)	136
BanI	GGYRCC	1 cut(s)	56
BanII	GRGCYC	1 cut(s)	855
BauI	CACGAG	1 cut(s)	272
Bbv12I	GWGCWC	1 cut(s)	493
BbvI	GCAGC	2 cut(s)	88, 1487
BccI	CCATC	5 cut(s)	16, 314, 536, 595, 1370
BciT130I	CCWGG	2 cut(s)	259, 632
BcoDI	GTCTC	2 cut(s)	686, 971
BfaI	CTAG	5 cut(s)	137, 246, 422, 971, 1569
BfmI	CTRYAG	2 cut(s)	454, 714
BfoI	RGCGCY	1 cut(s)	189
BisI	GCNGC	4 cut(s)	77, 84, 154, 1476
BlnI	CCTAGG	1 cut(s)	136
BlsI	GCNGC	4 cut(s)	78, 85, 155, 1477
Bme1390I	CCNGG	2 cut(s)	259, 632
BmeT110I	CYCGRG	1 cut(s)	176
BmgT120I	GGNCC	2 cut(s)	255, 1191
BmiI	GGNNCC	5 cut(s)	58, 364, 391, 1192, 1398
BmrFI	CCNGG	2 cut(s)	259, 632
BmsI	GCATC	6 cut(s)	18, 105, 258, 586, 656, 729
BoxI	GACNNNNGTC	1 cut(s)	698
BpmI	CTGGAG	2 cut(s)	89, 675
BpuEI	CTTGAG	1 cut(s)	710
BsaAI	YACGTR	2 cut(s)	906, 1393
BsaI	GGTCTC	1 cut(s)	686
BsaJI	CCNNGG	8 cut(s)	69, 136, 177, 385, 430, 630, 1194, 1597
BsaXI	ACNNNNNCTCC	2 cut(s)	354, 384
Bsc4I	CCNNNNNNNGG	4 cut(s)	22, 618, 636, 1589
Bse118I	RCCGGY	1 cut(s)	40
Bse1I	ACTGG	4 cut(s)	418, 512, 1148, 1583
BseBI	CCWGG	2 cut(s)	259, 632
BseDI	CCNNGG	8 cut(s)	69, 136, 177, 385, 430, 630, 1194, 1597
BseLI	CCNNNNNNNGG	4 cut(s)	22, 618, 636, 1589
BseNI	ACTGG	4 cut(s)	418, 512, 1148, 1583
BseRI	GAGGAG	1 cut(s)	290
BseX3I	CGGCCG	1 cut(s)	42
BseXI	GCAGC	2 cut(s)	88, 1487
BsgI	GTGCAG	1 cut(s)	1494
Bsh1285I	CGRYCG	2 cut(s)	45, 507
BshFI	GGCC	6 cut(s)	44, 68, 83, 182, 257, 1193
BshNI	GGYRCC	1 cut(s)	56
BsiEI	CGRYCG	2 cut(s)	45, 507
BsiHKAI	GWGCWC	1 cut(s)	493
BsiHKCI	CYCGRG	1 cut(s)	176
BsiSI	CCGG	3 cut(s)	41, 65, 87
BslFI	GGGAC	1 cut(s)	613
BslI	CCNNNNNNNGG	4 cut(s)	22, 618, 636, 1589
BsmAI	GTCTC	2 cut(s)	686, 971
BsmFI	GGGAC	1 cut(s)	613
BsmI	GAATGC	1 cut(s)	96
BsnI	GGCC	6 cut(s)	44, 68, 83, 182, 257, 1193
Bso31I	GGTCTC	1 cut(s)	686
BsoBI	CYCGRG	1 cut(s)	176
Bsp1286I	GDGCHC	2 cut(s)	493, 855
Bsp1407I	TGTACA	1 cut(s)	615
Bsp143I	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
Bsp19I	CCATGG	1 cut(s)	1194
BspACI	CCGC	4 cut(s)	84, 151, 154, 435
BspANI	GGCC	6 cut(s)	44, 68, 83, 182, 257, 1193
BspHI	TCATGA	3 cut(s)	111, 891, 1225
BspLI	GGNNCC	5 cut(s)	58, 364, 391, 1192, 1398
BspMAI	CTGCAG	1 cut(s)	718
BspPI	GGATC	4 cut(s)	503, 1432, 1448, 1503
BspT107I	GGYRCC	1 cut(s)	56
BspTNI	GGTCTC	1 cut(s)	686
BsrFI	RCCGGY	1 cut(s)	40
BsrGI	TGTACA	1 cut(s)	615
BsrI	ACTGG	4 cut(s)	418, 512, 1148, 1583
BssAI	RCCGGY	1 cut(s)	40
BssECI	CCNNGG	8 cut(s)	69, 136, 177, 385, 430, 630, 1194, 1597
BssMI	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
BssSI	CACGAG	1 cut(s)	272
BssT1I	CCWWGG	5 cut(s)	69, 136, 385, 430, 1194
Bst2BI	CACGAG	1 cut(s)	272
Bst2UI	CCWGG	2 cut(s)	259, 632
Bst4CI	ACNGT	4 cut(s)	520, 1178, 1291, 1601
Bst6I	CTCTTC	2 cut(s)	296, 1542
BstAPI	GCANNNNNTGC	1 cut(s)	1271
BstAUI	TGTACA	1 cut(s)	615
BstBAI	YACGTR	2 cut(s)	906, 1393
BstC8I	GCNNGC	4 cut(s)	81, 184, 718, 837
BstDSI	CCRYGG	2 cut(s)	1194, 1597
BstENI	CCTNNNNNAGG	1 cut(s)	616
BstH2I	RGCGCY	1 cut(s)	189
BstHHI	GCGC	1 cut(s)	188
BstKTI	GATC	7 cut(s)	111, 511, 963, 1231, 1427, 1443, 1498
BstMAI	GTCTC	2 cut(s)	686, 971
BstMBI	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
BstMCI	CGRYCG	2 cut(s)	45, 507
BstMWI	GCNNNNNNNGC	1 cut(s)	1271
BstNI	CCWGG	2 cut(s)	259, 632
BstNSI	RCATGY	2 cut(s)	835, 1040
BstPAI	GACNNNNGTC	1 cut(s)	698
BstSCI	CCNGG	2 cut(s)	257, 630
BstSFI	CTRYAG	2 cut(s)	454, 714
BstV1I	GCAGC	2 cut(s)	88, 1487
BstXI	CCANNNNNNTGG	1 cut(s)	1604
BstZI	CGGCCG	1 cut(s)	42
BsuRI	GGCC	6 cut(s)	44, 68, 83, 182, 257, 1193
BtgI	CCRYGG	2 cut(s)	1194, 1597
BtgZI	GCGATG	3 cut(s)	41, 614, 1551
BtsI	GCAGTG	1 cut(s)	1260
BtsIMutI	CAGTG	4 cut(s)	411, 516, 1183, 1260
Cac8I	GCNNGC	4 cut(s)	81, 184, 718, 837
CaiI	CAGNNNCTG	2 cut(s)	258, 518
CciI	TCATGA	3 cut(s)	111, 891, 1225
CfoI	GCGC	1 cut(s)	188
Cfr10I	RCCGGY	1 cut(s)	40
Cfr13I	GGNCC	2 cut(s)	255, 1191
Csp6I	GTAC	7 cut(s)	57, 445, 616, 829, 1174, 1317, 1356
CviQI	GTAC	7 cut(s)	57, 445, 616, 829, 1174, 1317, 1356
DpnI	GATC	7 cut(s)	110, 510, 962, 1230, 1426, 1442, 1497
DpnII	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
EaeI	YGGCCR	2 cut(s)	42, 66
EagI	CGGCCG	1 cut(s)	42
Eam1104I	CTCTTC	2 cut(s)	296, 1542
EarI	CTCTTC	2 cut(s)	296, 1542
EciI	GGCGGA	1 cut(s)	140
EclXI	CGGCCG	1 cut(s)	42
Eco130I	CCWWGG	5 cut(s)	69, 136, 385, 430, 1194
Eco24I	GRGCYC	1 cut(s)	855
Eco31I	GGTCTC	1 cut(s)	686
Eco32I	GATATC	2 cut(s)	36, 1009
Eco47III	AGCGCT	1 cut(s)	187
Eco52I	CGGCCG	1 cut(s)	42
Eco57I	CTGAAG	3 cut(s)	310, 767, 1475
Eco88I	CYCGRG	1 cut(s)	176
EcoNI	CCTNNNNNAGG	1 cut(s)	616
EcoO109I	RGGNCCY	1 cut(s)	255
EcoRI	GAATTC	1 cut(s)	1460
EcoRII	CCWGG	2 cut(s)	257, 630
EcoRV	GATATC	2 cut(s)	36, 1009
EcoT14I	CCWWGG	5 cut(s)	69, 136, 385, 430, 1194
EcoT22I	ATGCAT	1 cut(s)	649
EcoT38I	GRGCYC	1 cut(s)	855
ErhI	CCWWGG	5 cut(s)	69, 136, 385, 430, 1194
FaqI	GGGAC	1 cut(s)	613
Fnu4HI	GCNGC	4 cut(s)	77, 84, 154, 1476
FriOI	GRGCYC	1 cut(s)	855
Fsp4HI	GCNGC	4 cut(s)	77, 84, 154, 1476
FspBI	CTAG	5 cut(s)	137, 246, 422, 971, 1569
GlaI	GCGC	1 cut(s)	187
GluI	GCNGC	4 cut(s)	77, 84, 154, 1476
GsuI	CTGGAG	2 cut(s)	89, 675
HaeII	RGCGCY	1 cut(s)	189
HaeIII	GGCC	6 cut(s)	44, 68, 83, 182, 257, 1193
HapII	CCGG	3 cut(s)	41, 65, 87
HhaI	GCGC	1 cut(s)	188
Hin6I	GCGC	1 cut(s)	186
HinP1I	GCGC	1 cut(s)	186
HincII	GTYRAC	1 cut(s)	1117
HindII	GTYRAC	1 cut(s)	1117
HindIII	AAGCTT	2 cut(s)	1329, 1369
HinfI	GANTC	4 cut(s)	47, 581, 640, 1044
HpaII	CCGG	3 cut(s)	41, 65, 87
HphI	GGTGA	6 cut(s)	30, 327, 442, 1358, 1376, 1501
Hpy166II	GTNNAC	5 cut(s)	218, 427, 879, 1117, 1181
Hpy188I	TCNGA	8 cut(s)	235, 441, 725, 786, 922, 1251, 1287, 1530
Hpy8I	GTNNAC	5 cut(s)	218, 427, 879, 1117, 1181
HpyAV	CCTTC	6 cut(s)	836, 1140, 1232, 1410, 1415, 1450
HpyCH4III	ACNGT	4 cut(s)	520, 1178, 1291, 1601
HpyCH4IV	ACGT	2 cut(s)	905, 1392
HpyCH4V	TGCA	9 cut(s)	31, 647, 716, 761, 839, 1106, 1216, 1265, 1475
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1271
HpySE526I	ACGT	2 cut(s)	905, 1392
HspAI	GCGC	1 cut(s)	186
KpnI	GGTACC	1 cut(s)	60
Kzo9I	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
LmnI	GCTCC	3 cut(s)	73, 362, 1402
Lsp1109I	GCAGC	2 cut(s)	88, 1487
LweI	GCATC	6 cut(s)	18, 105, 258, 586, 656, 729
MaeI	CTAG	5 cut(s)	137, 246, 422, 971, 1569
MaeII	ACGT	2 cut(s)	905, 1392
MaeIII	GTNAC	6 cut(s)	370, 409, 514, 1032, 1379, 1388
MalI	GATC	7 cut(s)	110, 510, 962, 1230, 1426, 1442, 1497
MboI	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
MboII	GAAGA	8 cut(s)	92, 274, 283, 340, 658, 773, 1223, 1559
MhlI	GDGCHC	2 cut(s)	493, 855
MluCI	AATT	8 cut(s)	161, 207, 265, 606, 913, 1059, 1299, 1460
MlyI	GAGTC	1 cut(s)	649
MmeI	TCCRAC	2 cut(s)	747, 1021
Mph1103I	ATGCAT	1 cut(s)	649
MroXI	GAANNNNTTC	1 cut(s)	1460
MseI	TTAA	3 cut(s)	206, 1089, 1298
MslI	CAYNNNNRTG	4 cut(s)	551, 884, 1470, 1602
MspA1I	CMGCKG	1 cut(s)	19
MspI	CCGG	3 cut(s)	41, 65, 87
MspR9I	CCNGG	2 cut(s)	259, 632
Mva1269I	GAATGC	1 cut(s)	96
MvaI	CCWGG	2 cut(s)	259, 632
MwoI	GCNNNNNNNGC	1 cut(s)	1271
NcoI	CCATGG	1 cut(s)	1194
NdeII	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
NlaIV	GGNNCC	5 cut(s)	58, 364, 391, 1192, 1398
NmuCI	GTSAC	4 cut(s)	370, 409, 514, 1032
NsiI	ATGCAT	1 cut(s)	649
NspI	RCATGY	2 cut(s)	835, 1040
OliI	CACNNNNGTG	1 cut(s)	1470
PagI	TCATGA	3 cut(s)	111, 891, 1225
PciI	ACATGT	1 cut(s)	1036
PctI	GAATGC	1 cut(s)	96
PdmI	GAANNNNTTC	1 cut(s)	1460
PfeI	GAWTC	3 cut(s)	47, 581, 1044
PflFI	GACNNNGTC	2 cut(s)	625, 1245
PflMI	CCANNNNNTGG	2 cut(s)	22, 1589
PkrI	GCNGC	4 cut(s)	78, 85, 155, 1477
PleI	GAGTC	1 cut(s)	648
PpsI	GAGTC	1 cut(s)	648
Ppu21I	YACGTR	2 cut(s)	906, 1393
PscI	ACATGT	1 cut(s)	1036
PshAI	GACNNNNGTC	1 cut(s)	698
PshBI	ATTAAT	1 cut(s)	1298
Psp6I	CCWGG	2 cut(s)	257, 630
PspGI	CCWGG	2 cut(s)	257, 630
PspN4I	GGNNCC	5 cut(s)	58, 364, 391, 1192, 1398
PspPI	GGNCC	2 cut(s)	255, 1191
PstI	CTGCAG	1 cut(s)	718
PstNI	CAGNNNCTG	2 cut(s)	258, 518
PsyI	GACNNNGTC	2 cut(s)	625, 1245
PvuII	CAGCTG	1 cut(s)	19
RsaI	GTAC	7 cut(s)	58, 446, 617, 830, 1175, 1318, 1357
RsaNI	GTAC	7 cut(s)	57, 445, 616, 829, 1174, 1317, 1356
RseI	CAYNNNNRTG	4 cut(s)	551, 884, 1470, 1602
SaqAI	TTAA	3 cut(s)	206, 1089, 1298
SatI	GCNGC	4 cut(s)	77, 84, 154, 1476
Sau3AI	GATC	7 cut(s)	108, 508, 960, 1228, 1424, 1440, 1495
Sau96I	GGNCC	2 cut(s)	255, 1191
SchI	GAGTC	1 cut(s)	649
ScrFI	CCNGG	2 cut(s)	259, 632
SduI	GDGCHC	2 cut(s)	493, 855
SfaNI	GCATC	6 cut(s)	18, 105, 258, 586, 656, 729
SfcI	CTRYAG	2 cut(s)	454, 714
SmiMI	CAYNNNNRTG	4 cut(s)	551, 884, 1470, 1602
SmlI	CTYRAG	1 cut(s)	689
SmoI	CTYRAG	1 cut(s)	689
Sse9I	AATT	8 cut(s)	161, 207, 265, 606, 913, 1059, 1299, 1460
SsiI	CCGC	4 cut(s)	84, 151, 154, 435
SspI	AATATT	1 cut(s)	873
SspMI	CTAG	5 cut(s)	137, 246, 422, 971, 1569
StyD4I	CCNGG	2 cut(s)	257, 630
StyI	CCWWGG	5 cut(s)	69, 136, 385, 430, 1194
TaaI	ACNGT	4 cut(s)	520, 1178, 1291, 1601
TaiI	ACGT	2 cut(s)	908, 1395
TaqI	TCGA	3 cut(s)	1126, 1186, 1498
TaqII	GACCGA	1 cut(s)	521
TasI	AATT	8 cut(s)	161, 207, 265, 606, 913, 1059, 1299, 1460
TatI	WGTACW	2 cut(s)	615, 1355
TauI	GCSGC	2 cut(s)	86, 156
TfiI	GAWTC	3 cut(s)	47, 581, 1044
Tru1I	TTAA	3 cut(s)	206, 1089, 1298
Tru9I	TTAA	3 cut(s)	206, 1089, 1298
TscAI	CASTG	4 cut(s)	418, 523, 1183, 1267
TseFI	GTSAC	4 cut(s)	370, 409, 514, 1032
TseI	GCWGC	2 cut(s)	76, 1475
Tsp45I	GTSAC	4 cut(s)	370, 409, 514, 1032
TspDTI	ATGAA	8 cut(s)	569, 658, 908, 1036, 1214, 1463, 1470, 1554
TspRI	CASTG	4 cut(s)	418, 523, 1183, 1267
Tth111I	GACNNNGTC	2 cut(s)	625, 1245
Van91I	CCANNNNNTGG	2 cut(s)	22, 1589
VspI	ATTAAT	1 cut(s)	1298
XagI	CCTNNNNNAGG	1 cut(s)	616
XapI	RAATTY	3 cut(s)	161, 913, 1460
XceI	RCATGY	2 cut(s)	835, 1040
XmaJI	CCTAGG	1 cut(s)	136
XmnI	GAANNNNTTC	1 cut(s)	1460
XspI	CTAG	5 cut(s)	137, 246, 422, 971, 1569
Zsp2I	ATGCAT	1 cut(s)	649

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.