MD01G1108700.v1.1

Caffeoylshikimate esterase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0014337
Physical Location & Seq
Forward (+)
22157195 .. 22160070
2876 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1108700.v1.1.491

Sequence Viewer

Length: 1143 bp
ATGGCGCACCCGATTGCGGAGGCGAACGAGGAAAGCCCCTACGGCGCGTTAACTCCGGAGGCCTTCTATTCCCGCCACAACGTCTCCCACGCATCCGAGTACACCACAAACCCCCGAGGCCTCAAGCTCTTCACCCAGTGGTGGACCCCACTGCCTCCGACTGAGATCGTCGGGACCCTCGCCATCGTCCACGGCTTCACCGGCGAGACCAGCTGGTTCGTCCAGCTCACCGCCGTCCACTTCGCCAAGTCCGGCTTCGCCGTCTGCGCCATCGACCACCAGGGCCATGGATTCTCTGATGGACTCATCGCTCACATCCCCGACATCAACCTCGTAGTCGACGACTGCATCTCTTTCTTCGACTCGTTTCGTGCCAACCACGCGCCGAAGAACCGCCCCTCGTTCCTCTACTCTGAGTCCCTCGGCGGCGCGATCGCCCTTCTCGTCACGCTCCGGCAAGGAAGCGGCGCGTGGGACGGTCTCATCCTCAACGGCGCCATGTGCGGGATCAGCCCCAAGTTCAAGCCGCCGTGGCCGCTCGAGCACCTGCTCTTCCTCGTGGCCGCGGTGATCCCGACATGGAGGGTGGTTCCCACGCGTGGGTCGCTCCCGGACGTGTCGTTCAAGGAGGAGTGGAAGCGGAAGCTGGCGCTGGCGAGTCCGAGGAGGACGGTGGCGAGGCCACGCGCTGCGACGGCGCTTGAGCTGCTGAGAGTGTGCAAGGAGCTGCAGGGGAAATTCGAGGAGGTGGAGGTGCCGCTGTTGATAGTCCATGGGGGCGACGACGTCGTCTGCGACCCCGCATGCGCGGAGGAGCTGTACAGGCGCGCGTCTAGCAAGGACAAAACGCTCAGGATCCACGAGGGCTTGTGGCACCAGCTGGTTGGCGAGCCCCAGGAGAAAGTGGACTTGGTGTTCGGTGAAATGGTGGAGTGGCTTCGTACTCGAGCTCAACGCGCCGCCGCCGCGAATGGAGGTGTTCATGTGGTTATGAGCACGTGGCATGTGATGTGCATGTATCTGAGGTTGATCTTCTTGGTGATCAAGTGGATGACATTATGTGATCACTCACCAGTTCTGCGGCACTATTCCGAGGTGAGCAATGTTTTCGTTTCCCCATTTCTTGCGTCGCAAGGTCGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko01100 ko04714 ko04723 ko04923 map00561 map01100 map04714 map04723 map04923
Pfam Domains
Protein Families
Hydrolase_4

Protein Analysis

381

Amino Acids

42.31

Weight (kDa)

6.78

Isoelectric Point (pI)

41.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hydrolase_4 PF12146 57 - 299 1.1e-57 Serine aminopeptidase, S33
Abhydrolase_1 PF00561 60 - 176 2.5e-06 alpha/beta hydrolase fold
Abhydrolase_6 PF12697 62 - 292 9.7e-11 Alpha/beta hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014337)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G14980 AT5G19290
fragaria_vesca FvH4_7g19610
malus_domestica MD01G1108700.v1.1 MD07G1174800.v1.1
prunus_persica Prupe.2G213900_v2.0.a1
pyrus_communis pycom01g13570 pycom07g16920
rosa_chinensis RchiOBHm_Chr1g0363421
rosa_laevigata RLG00000027569
rosa_multiflora Rmu_sc0000339.1_g000010 Rmu_sc0004458.1_g000006
rosa_rugosa Rorug01G0306600
rosa_samantha Rh1AG315700 Rh1CG295400 Rh1DG310100
rosa_wichuraiana Rw1G027960

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 555
AasI GACNNNNNNGTC 1 cut(s) 788
AatII GACGTC 1 cut(s) 789
Acc36I ACCTGC 1 cut(s) 555
AccB1I GGYRCC 3 cut(s) 494, 754, 873
AccBSI CCGCTC 1 cut(s) 538
AccI GTMKAC 1 cut(s) 339
AccIII TCCGGA 1 cut(s) 55
AclWI GGATC 4 cut(s) 515, 565, 850, 863
AcoI YGGCCR 2 cut(s) 533, 561
AcsI RAATTY 1 cut(s) 737
AcvI CACGTG 1 cut(s) 999
AcyI GRCGYC 2 cut(s) 495, 786
AdeI CACNNNGTG 1 cut(s) 138
AfaI GTAC 3 cut(s) 101, 821, 943
AfiI CCNNNNNNNGG 5 cut(s) 16, 141, 504, 599, 600
AflIII ACRYGT 2 cut(s) 596, 615
AgsI TTSAA 2 cut(s) 523, 625
AjiI CACGTC 1 cut(s) 616
AjnI CCWGG 2 cut(s) 279, 894
AjuI GAANNNNNNNTTGG 4 cut(s) 239, 271, 893, 925
AloI GAACNNNNNNTCC 4 cut(s) 605, 637, 899, 931
AluBI AGCT 9 cut(s) 127, 213, 226, 646, 706, 727, 817, 880, 950
AluI AGCT 9 cut(s) 127, 213, 226, 646, 706, 727, 817, 880, 950
Alw21I GWGCWC 3 cut(s) 546, 952, 998
Alw26I GTCTC 3 cut(s) 88, 200, 485
AlwI GGATC 4 cut(s) 515, 565, 850, 863
Ama87I CYCGRG 3 cut(s) 114, 539, 945
Aor13HI TCCGGA 1 cut(s) 55
AoxI GGCC 6 cut(s) 60, 118, 283, 533, 561, 680
ApeKI GCWGC 3 cut(s) 689, 706, 727
ApoI RAATTY 1 cut(s) 737
ArsI GACNNNNNNTTYG 2 cut(s) 899, 931
AsiSI GCGATCGC 1 cut(s) 435
AspS9I GGNCC 3 cut(s) 144, 174, 283
AsuC2I CCSGG 1 cut(s) 611
AsuHPI GGTGA 8 cut(s) 124, 190, 220, 580, 932, 1051, 1062, 1108
AvaI CYCGRG 3 cut(s) 114, 539, 945
AvaII GGWCC 2 cut(s) 144, 174
BamHI GGATCC 1 cut(s) 855
BanI GGYRCC 3 cut(s) 494, 754, 873
BanII GRGCYC 2 cut(s) 894, 952
BauI CACGAG 2 cut(s) 557, 860
BbrPI CACGTG 1 cut(s) 999
Bbv12I GWGCWC 3 cut(s) 546, 952, 998
BbvI GCAGC 3 cut(s) 676, 693, 714
BccI CCATC 3 cut(s) 191, 278, 293
BceAI ACGGC 7 cut(s) 58, 208, 218, 245, 508, 514, 711
BcgI CGANNNNNNTGC 2 cut(s) 1090, 1124
BciT130I CCWGG 2 cut(s) 281, 896
BclI TGATCA 2 cut(s) 1041, 1063
BcnI CCSGG 1 cut(s) 611
BcoDI GTCTC 3 cut(s) 88, 200, 485
BfaI CTAG 1 cut(s) 834
BfmI CTRYAG 1 cut(s) 728
BfoI RGCGCY 3 cut(s) 498, 653, 701
BfuAI ACCTGC 1 cut(s) 555
BglI GCCNNNNNGGC 2 cut(s) 42, 532
Bme1390I CCNGG 3 cut(s) 281, 611, 896
Bme18I GGWCC 2 cut(s) 144, 174
BmeT110I CYCGRG 3 cut(s) 114, 539, 945
BmgBI CACGTC 1 cut(s) 616
BmgT120I GGNCC 3 cut(s) 144, 174, 283
BmiI GGNNCC 8 cut(s) 146, 175, 176, 496, 591, 756, 857, 875
BmrFI CCNGG 3 cut(s) 281, 611, 896
BmrI ACTGGG 1 cut(s) 130
BmsI GCATC 2 cut(s) 101, 357
BmuI ACTGGG 1 cut(s) 130
Bpu10I CCTNAGC 1 cut(s) 851
BpuEI CTTGAG 2 cut(s) 107, 722
BpuMI CCSGG 1 cut(s) 611
BsaAI YACGTR 1 cut(s) 999
BsaHI GRCGYC 2 cut(s) 495, 786
BsaI GGTCTC 2 cut(s) 200, 485
BsaWI WCCGGW 1 cut(s) 55
BsaXI ACNNNNNCTCC 4 cut(s) 68, 98, 803, 833
Bsc4I CCNNNNNNNGG 5 cut(s) 16, 141, 504, 599, 600
Bse118I RCCGGY 1 cut(s) 200
Bse1I ACTGG 2 cut(s) 136, 1073
Bse3DI GCAATG 1 cut(s) 1108
BseAI TCCGGA 1 cut(s) 55
BseBI CCWGG 2 cut(s) 281, 896
BseGI GGATG 4 cut(s) 92, 315, 483, 1056
BseLI CCNNNNNNNGG 5 cut(s) 16, 141, 504, 599, 600
BseMI GCAATG 1 cut(s) 1108
BseMII CTCAG 5 cut(s) 153, 405, 701, 865, 1013
BseNI ACTGG 2 cut(s) 136, 1073
BsePI GCGCGC 1 cut(s) 826
BseRI GAGGAG 4 cut(s) 644, 679, 758, 827
BseXI GCAGC 3 cut(s) 676, 693, 714
Bsh1285I CGRYCG 1 cut(s) 435
BshFI GGCC 6 cut(s) 62, 120, 285, 535, 563, 682
BshNI GGYRCC 3 cut(s) 494, 754, 873
BsiEI CGRYCG 1 cut(s) 435
BsiHKAI GWGCWC 3 cut(s) 546, 952, 998
BsiHKCI CYCGRG 3 cut(s) 114, 539, 945
BsiSI CCGG 5 cut(s) 56, 201, 252, 454, 611
BslFI GGGAC 3 cut(s) 187, 403, 488
BslI CCNNNNNNNGG 5 cut(s) 16, 141, 504, 599, 600
BsmAI GTCTC 3 cut(s) 88, 200, 485
BsmBI CGTCTC 1 cut(s) 88
BsmFI GGGAC 3 cut(s) 187, 403, 488
BsnI GGCC 6 cut(s) 62, 120, 285, 535, 563, 682
Bso31I GGTCTC 2 cut(s) 200, 485
BsoBI CYCGRG 3 cut(s) 114, 539, 945
Bsp1286I GDGCHC 4 cut(s) 546, 894, 952, 998
Bsp13I TCCGGA 1 cut(s) 55
Bsp1407I TGTACA 1 cut(s) 819
Bsp143I GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
Bsp19I CCATGG 2 cut(s) 286, 772
BspANI GGCC 6 cut(s) 62, 120, 285, 535, 563, 682
BspCNI CTCAG 5 cut(s) 154, 406, 702, 864, 1014
BspEI TCCGGA 1 cut(s) 55
BspLI GGNNCC 8 cut(s) 146, 175, 176, 496, 591, 756, 857, 875
BspMAI CTGCAG 1 cut(s) 732
BspMI ACCTGC 1 cut(s) 555
BspPI GGATC 4 cut(s) 515, 565, 850, 863
BspQI GCTCTTC 2 cut(s) 134, 557
BspT107I GGYRCC 3 cut(s) 494, 754, 873
BspTNI GGTCTC 2 cut(s) 200, 485
BsrBI CCGCTC 1 cut(s) 538
BsrDI GCAATG 1 cut(s) 1108
BsrFI RCCGGY 1 cut(s) 200
BsrGI TGTACA 1 cut(s) 819
BsrI ACTGG 2 cut(s) 136, 1073
BssAI RCCGGY 1 cut(s) 200
BssHII GCGCGC 1 cut(s) 826
BssMI GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
BssNI GRCGYC 2 cut(s) 495, 786
BssSI CACGAG 2 cut(s) 557, 860
BssT1I CCWWGG 2 cut(s) 286, 772
Bst2BI CACGAG 2 cut(s) 557, 860
Bst2UI CCWGG 2 cut(s) 281, 896
Bst4CI ACNGT 2 cut(s) 479, 673
Bst6I CTCTTC 2 cut(s) 134, 557
BstACI GRCGYC 2 cut(s) 495, 786
BstAUI TGTACA 1 cut(s) 819
BstBAI YACGTR 1 cut(s) 999
BstC8I GCNNGC 5 cut(s) 648, 654, 805, 828, 890
BstDEI CTNAG 5 cut(s) 162, 414, 710, 851, 1022
BstDSI CCRYGG 5 cut(s) 190, 286, 530, 564, 772
BstF5I GGATG 4 cut(s) 92, 315, 483, 1056
BstH2I RGCGCY 3 cut(s) 498, 653, 701
BstKTI GATC 8 cut(s) 168, 435, 510, 573, 858, 1032, 1044, 1066
BstMAI GTCTC 3 cut(s) 88, 200, 485
BstMBI GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
BstMCI CGRYCG 1 cut(s) 435
BstNI CCWGG 2 cut(s) 281, 896
BstNSI RCATGY 3 cut(s) 807, 1007, 1018
BstSCI CCNGG 3 cut(s) 279, 609, 894
BstSFI CTRYAG 1 cut(s) 728
BstV1I GCAGC 3 cut(s) 676, 693, 714
BstX2I RGATCY 1 cut(s) 855
BstXI CCANNNNNNTGG 2 cut(s) 287, 884
BstYI RGATCY 1 cut(s) 855
BsuRI GGCC 6 cut(s) 62, 120, 285, 535, 563, 682
BtgI CCRYGG 5 cut(s) 190, 286, 530, 564, 772
BtgZI GCGATG 1 cut(s) 292
BtrI CACGTC 1 cut(s) 616
BtsCI GGATG 4 cut(s) 92, 315, 483, 1056
BtsI GCAGTG 1 cut(s) 149
BtsIMutI CAGTG 2 cut(s) 143, 149
BveI ACCTGC 1 cut(s) 555
Cac8I GCNNGC 5 cut(s) 648, 654, 805, 828, 890
Cfr10I RCCGGY 1 cut(s) 200
Cfr13I GGNCC 3 cut(s) 144, 174, 283
Cfr42I CCGCGG 1 cut(s) 567
CseI GACGC 2 cut(s) 819, 1116
Csp6I GTAC 3 cut(s) 100, 820, 942
CviAII CATG 8 cut(s) 287, 499, 579, 773, 804, 983, 1004, 1015
CviQI GTAC 3 cut(s) 100, 820, 942
DdeI CTNAG 5 cut(s) 162, 414, 710, 851, 1022
DinI GGCGCC 1 cut(s) 496
DpnI GATC 8 cut(s) 167, 434, 509, 572, 857, 1031, 1043, 1065
DpnII GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
DraIII CACNNNGTG 1 cut(s) 138
DrdI GACNNNNNNGTC 1 cut(s) 788
DseDI GACNNNNNNGTC 1 cut(s) 788
EaeI YGGCCR 2 cut(s) 533, 561
Eam1104I CTCTTC 2 cut(s) 134, 557
EarI CTCTTC 2 cut(s) 134, 557
Ecl136II GAGCTC 1 cut(s) 950
Eco130I CCWWGG 2 cut(s) 286, 772
Eco147I AGGCCT 2 cut(s) 62, 120
Eco24I GRGCYC 2 cut(s) 894, 952
Eco31I GGTCTC 2 cut(s) 200, 485
Eco47I GGWCC 2 cut(s) 144, 174
Eco53kI GAGCTC 1 cut(s) 950
Eco72I CACGTG 1 cut(s) 999
Eco88I CYCGRG 3 cut(s) 114, 539, 945
EcoICRI GAGCTC 1 cut(s) 950
EcoO109I RGGNCCY 1 cut(s) 174
EcoRII CCWGG 2 cut(s) 279, 894
EcoT14I CCWWGG 2 cut(s) 286, 772
EcoT38I GRGCYC 2 cut(s) 894, 952
EgeI GGCGCC 1 cut(s) 496
EheI GGCGCC 1 cut(s) 496
ErhI CCWWGG 2 cut(s) 286, 772
Esp3I CGTCTC 1 cut(s) 88
FaeI CATG 8 cut(s) 290, 502, 582, 776, 807, 986, 1007, 1018
FalI AAGNNNNNCTT 2 cut(s) 239, 271
FaqI GGGAC 3 cut(s) 187, 403, 488
FatI CATG 8 cut(s) 286, 498, 578, 772, 803, 982, 1003, 1014
FauI CCCGC 3 cut(s) 80, 497, 808
FbaI TGATCA 2 cut(s) 1041, 1063
FblI GTMKAC 1 cut(s) 339
FokI GGATG 4 cut(s) 79, 302, 470, 1063
FriOI GRGCYC 2 cut(s) 894, 952
FspBI CTAG 1 cut(s) 834
HaeII RGCGCY 3 cut(s) 498, 653, 701
HaeIII GGCC 6 cut(s) 62, 120, 285, 535, 563, 682
HapII CCGG 5 cut(s) 56, 201, 252, 454, 611
HgaI GACGC 2 cut(s) 819, 1116
Hin1I GRCGYC 2 cut(s) 495, 786
Hin1II CATG 8 cut(s) 290, 502, 582, 776, 807, 986, 1007, 1018
HincII GTYRAC 2 cut(s) 51, 340
HindII GTYRAC 2 cut(s) 51, 340
HinfI GANTC 5 cut(s) 291, 303, 362, 416, 658
HpaI GTTAAC 1 cut(s) 51
HpaII CCGG 5 cut(s) 56, 201, 252, 454, 611
HphI GGTGA 8 cut(s) 124, 190, 220, 580, 932, 1051, 1062, 1108
Hpy166II GTNNAC 7 cut(s) 51, 102, 144, 190, 238, 340, 907
Hpy188I TCNGA 7 cut(s) 97, 159, 298, 415, 663, 1023, 1093
Hpy188III TCNNGA 4 cut(s) 56, 172, 574, 853
Hpy8I GTNNAC 7 cut(s) 51, 102, 144, 190, 238, 340, 907
Hpy99I CGWCG 7 cut(s) 173, 344, 697, 785, 788, 791, 1132
HpyAV CCTTC 2 cut(s) 73, 449
HpyCH4III ACNGT 2 cut(s) 479, 673
HpyCH4IV ACGT 4 cut(s) 81, 615, 786, 998
HpyCH4V TGCA 4 cut(s) 348, 720, 730, 1014
HpyF3I CTNAG 5 cut(s) 162, 414, 710, 851, 1022
HpySE526I ACGT 4 cut(s) 81, 615, 786, 998
Hsp92I GRCGYC 2 cut(s) 495, 786
Hsp92II CATG 8 cut(s) 290, 502, 582, 776, 807, 986, 1007, 1018
KasI GGCGCC 1 cut(s) 494
KflI GGGWCCC 1 cut(s) 174
Kpn2I TCCGGA 1 cut(s) 55
Ksp22I TGATCA 2 cut(s) 1041, 1063
KspAI GTTAAC 1 cut(s) 51
KspI CCGCGG 1 cut(s) 567
Kzo9I GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
LguI GCTCTTC 2 cut(s) 134, 557
LmnI GCTCC 4 cut(s) 456, 612, 724, 814
Lsp1109I GCAGC 3 cut(s) 676, 693, 714
LweI GCATC 2 cut(s) 101, 357
MaeI CTAG 1 cut(s) 834
MaeII ACGT 4 cut(s) 81, 615, 786, 998
MaeIII GTNAC 1 cut(s) 445
MalI GATC 8 cut(s) 167, 434, 509, 572, 857, 1031, 1043, 1065
MbiI CCGCTC 1 cut(s) 538
MboI GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
MboII GAAGA 5 cut(s) 121, 349, 400, 544, 1024
MflI RGATCY 1 cut(s) 855
MhlI GDGCHC 4 cut(s) 546, 894, 952, 998
MluCI AATT 1 cut(s) 737
MluI ACGCGT 1 cut(s) 596
Mly113I GGCGCC 1 cut(s) 495
MlyI GAGTC 4 cut(s) 297, 356, 425, 667
MmeI TCCRAC 1 cut(s) 182
MroI TCCGGA 1 cut(s) 55
MseI TTAA 1 cut(s) 50
MspA1I CMGCKG 4 cut(s) 213, 566, 760, 880
MspI CCGG 5 cut(s) 56, 201, 252, 454, 611
MspR9I CCNGG 3 cut(s) 281, 611, 896
MvaI CCWGG 2 cut(s) 281, 896
NarI GGCGCC 1 cut(s) 495
NciI CCSGG 1 cut(s) 611
NcoI CCATGG 2 cut(s) 286, 772
NdeII GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
NlaIII CATG 8 cut(s) 290, 502, 582, 776, 807, 986, 1007, 1018
NlaIV GGNNCC 8 cut(s) 146, 175, 176, 496, 591, 756, 857, 875
NmeAIII GCCGAG 1 cut(s) 402
NmuCI GTSAC 1 cut(s) 445
NspI RCATGY 3 cut(s) 807, 1007, 1018
PaeI GCATGC 1 cut(s) 807
PaeR7I CTCGAG 2 cut(s) 539, 945
PaqCI CACCTGC 1 cut(s) 555
PauI GCGCGC 1 cut(s) 826
PceI AGGCCT 2 cut(s) 62, 120
PciSI GCTCTTC 2 cut(s) 134, 557
PcsI WCGNNNNNNNCGW 3 cut(s) 339, 441, 792
PfeI GAWTC 1 cut(s) 291
PflFI GACNNNGTC 2 cut(s) 785, 788
PfoI TCCNGGA 1 cut(s) 609
Ple19I CGATCG 1 cut(s) 435
PleI GAGTC 4 cut(s) 297, 356, 424, 666
PluTI GGCGCC 1 cut(s) 498
PmaCI CACGTG 1 cut(s) 999
PmlI CACGTG 1 cut(s) 999
PpsI GAGTC 4 cut(s) 297, 356, 424, 666
Ppu21I YACGTR 1 cut(s) 999
PpuMI RGGWCCY 1 cut(s) 174
Psp124BI GAGCTC 1 cut(s) 952
Psp5II RGGWCCY 1 cut(s) 174
Psp6I CCWGG 2 cut(s) 279, 894
PspCI CACGTG 1 cut(s) 999
PspGI CCWGG 2 cut(s) 279, 894
PspN4I GGNNCC 8 cut(s) 146, 175, 176, 496, 591, 756, 857, 875
PspPI GGNCC 3 cut(s) 144, 174, 283
PspPPI RGGWCCY 1 cut(s) 174
PspXI VCTCGAGB 2 cut(s) 539, 945
PstI CTGCAG 1 cut(s) 732
PsuI RGATCY 1 cut(s) 855
PsyI GACNNNGTC 2 cut(s) 785, 788
PteI GCGCGC 1 cut(s) 826
PvuI CGATCG 1 cut(s) 435
PvuII CAGCTG 2 cut(s) 213, 880
RgaI GCGATCGC 1 cut(s) 435
RsaI GTAC 3 cut(s) 101, 821, 943
RsaNI GTAC 3 cut(s) 100, 820, 942
SacI GAGCTC 1 cut(s) 952
SacII CCGCGG 1 cut(s) 567
SalI GTCGAC 1 cut(s) 338
SapI GCTCTTC 2 cut(s) 134, 557
SaqAI TTAA 1 cut(s) 50
Sau3AI GATC 8 cut(s) 165, 432, 507, 570, 855, 1029, 1041, 1063
Sau96I GGNCC 3 cut(s) 144, 174, 283
SchI GAGTC 4 cut(s) 297, 356, 425, 667
ScrFI CCNGG 3 cut(s) 281, 611, 896
SduI GDGCHC 4 cut(s) 546, 894, 952, 998
SfaAI GCGATCGC 1 cut(s) 435
SfaNI GCATC 2 cut(s) 101, 357
SfcI CTRYAG 1 cut(s) 728
SfoI GGCGCC 1 cut(s) 496
Sfr274I CTCGAG 2 cut(s) 539, 945
Sfr303I CCGCGG 1 cut(s) 567
SgfI GCGATCGC 1 cut(s) 435
SgrAI CRCCGGYG 1 cut(s) 200
SgrBI CCGCGG 1 cut(s) 567
SinI GGWCC 2 cut(s) 144, 174
SlaI CTCGAG 2 cut(s) 539, 945
SmlI CTYRAG 4 cut(s) 122, 539, 701, 945
SmoI CTYRAG 4 cut(s) 122, 539, 701, 945
SphI GCATGC 1 cut(s) 807
Sse9I AATT 1 cut(s) 737
SseBI AGGCCT 2 cut(s) 62, 120
SspDI GGCGCC 1 cut(s) 494
SspMI CTAG 1 cut(s) 834
SstI GAGCTC 1 cut(s) 952
StuI AGGCCT 2 cut(s) 62, 120
StyD4I CCNGG 3 cut(s) 279, 609, 894
StyI CCWWGG 2 cut(s) 286, 772
TaaI ACNGT 2 cut(s) 479, 673
TaiI ACGT 4 cut(s) 84, 618, 789, 1001
TaqI TCGA 6 cut(s) 273, 339, 360, 540, 741, 946
TasI AATT 1 cut(s) 737
TatI WGTACW 2 cut(s) 99, 819
TfiI GAWTC 1 cut(s) 291
Tru1I TTAA 1 cut(s) 50
Tru9I TTAA 1 cut(s) 50
TscAI CASTG 2 cut(s) 143, 156
TseFI GTSAC 1 cut(s) 445
TseI GCWGC 3 cut(s) 689, 706, 727
Tsp45I GTSAC 1 cut(s) 445
TspDTI ATGAA 1 cut(s) 971
TspRI CASTG 2 cut(s) 143, 156
Tth111I GACNNNGTC 2 cut(s) 785, 788
VpaK11BI GGWCC 2 cut(s) 144, 174
XapI RAATTY 1 cut(s) 737
XceI RCATGY 3 cut(s) 807, 1007, 1018
XcmI CCANNNNNNNNNTGG 1 cut(s) 284
XhoI CTCGAG 2 cut(s) 539, 945
XmiI GTMKAC 1 cut(s) 339
XspI CTAG 1 cut(s) 834
ZraI GACGTC 1 cut(s) 787
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.