Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr01

Orthogroup ID

OG0008413

Physical Location & Seq

Genomic Coordinates Reverse (-)

22184961 .. 22190545

Gene Structure 5585 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD01G1108900.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1329 bp

ATGGCTTCCTCTCTCGCTTCCAAACCATTCCTCGGAGCTCCAACGACCGATGGGCTTTCTGGGTTGTGCTCCTCCTCCGATCTTCGGACCCTCTCGTCCTCCTCCGTTCAATTTGTGATCCGCCCGAGAAACCCCAAGAAACTCCAGGTGCAGGCAGCTGGGAATACTACCGGGAATCATTTTCGTGTTACAACTTTTGGGGAATCTCATGGTGGTGGTGTTGGTTGTGTAATTGATGGATGCCCTCCTCGTATGCCGCTCTCCGTAGAAGATTTGCAAGGTGACCTTGACAGAAGGAGGCCAGGTCAGAGTCGAATTACTACCCCTAGGAAGGAAACTGACACATGCCGAATACTTTCAGGAGTTCATGAAGGAGTGACAACTGGGACACCAATTCTTGTGCTTGTACCCAATACTGATCAGAGAGGACGTGATTATGACGAAATGTCAGTAGCTTATAGGCCTTCACATGCAGATCGAACTTATGACCAAAAGTATGGTATCAGATCAGTGCAGGGTGGTGGTAGATCTTCTGCTAGAGAAACAATTGGAAGAGTTGCAGCTGGAGCCCTTGCCAAGAAAATCCTTAAGGCTTTCTCAGGAACTGAGATCCTAGCTTATGTTTCACAAGTTCATAAGGTTGTGCTTCCCGAGGAATTGGTTGATCATCACACTTTGACACTTGATCAGATAGAGAGTAATATCGTTAGGTGCCCAGATCCTGAATATGCAGAGAAGATGATCGCAGCCATTGATGCTGTCAGGGTGAAGGGGCAATCCATTGGTGGTGTTGTCACATGCATTGTTAGAAATTGCCCGCCAGGGCTTGGTTCACCAGTCTTTGATAAACTTGAAGCTGAATGTGCTAAAGCTGTTATGTCATTACCTGCAACAAAGGGATTTGAATTTGGAAGTGGATTTGCAGGTACCTTTTTAACTGGGAGTGAACATAATGATGAGTTCTATTTGGATGATCAAGGAAAAATCAGGACAAGAACAAATCGCTCTGGCGGGACACAGGGAGGACTATCCAATGGGGAAATCATAAACATGAGAATAGCTTTCAAGCCAACAGCTACAATTGGAAAGAAACAGAATACAGTGACTAGAGATAAAAAGGAGATAGAACTTATAGCCCGTGGTCGCCATGATCCTTGTGTTGTTCCGCGAGCTGTGCCGATGGTGGAAGCTGTAATAGCGCTTGCGCTCGTGGACCAACTAATGGCAGATTTTGCTCAGTGTCATATGTTTCCTATCAATCCCGACCTGCAAGACCCTGTGCCGCAGCCGTTGGTTGATGCAGCAGAGGCAGCAACTCTGCACATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0003824 GO:0004107 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005829 GO:0006082 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0008652 GO:0009058 GO:0009072 GO:0009073 GO:0009423 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009987 GO:0010181 GO:0016053 GO:0016829 GO:0016835 GO:0016838 GO:0019438 GO:0019752 GO:0031974 GO:0031981 GO:0032553 GO:0036094 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043436 GO:0043648 GO:0043650 GO:0044237 GO:0044238 GO:0044249 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044428 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046417 GO:0048037 GO:0050662 GO:0070013 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901360 GO:1901362 GO:1901363 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00400 ko01100 ko01110 ko01130 ko01230 map00400 map01100 map01110 map01130 map01230

Pfam Domains

Protein Families

Chorismate_synt

Protein Analysis

443

Amino Acids

47.47

Weight (kDa)

7.6

Isoelectric Point (pI)

44.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Chorismate_synt	PF01264	61 - 408	2e-134	Chorismate synthase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008413)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48850 AT1G48850 AT1G48850
fragaria_vesca	FvH4_7g19670 FvH4_7g19670
malus_domestica	MD01G1108900.v1.1 MD07G1175200.v1.1
prunus_persica	Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1 Prupe.2G214400_v2.0.a1
pyrus_communis	pycom07g16960
rosa_chinensis	RchiOBHm_Chr1g0363491
rosa_laevigata	RLG00000027561
rosa_multiflora	Rmu_sc0008820.1_g000005
rosa_roxburghii	Rroxscaffold_4G00293120
rosa_rugosa	Rorug01G0307400 Rorug01G0307500 Rorug01G0307600
rosa_samantha	Rh1AG316600 Rh1BG279900 Rh1CG296100 Rh1DG311200
rosa_wichuraiana	Rw1G028050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	94
Acc36I	ACCTGC	3 cut(s)	895, 914, 1275
Acc65I	GGTACC	1 cut(s)	926
AccB1I	GGYRCC	2 cut(s)	711, 926
AccB7I	CCANNNNNTGG	2 cut(s)	827, 1222
AccBSI	CCGCTC	1 cut(s)	259
AccII	CGCG	1 cut(s)	1168
AciI	CCGC	6 cut(s)	121, 257, 818, 1011, 1166, 1283
AclWI	GGATC	4 cut(s)	112, 604, 713, 1145
AcsI	RAATTY	1 cut(s)	905
AfaI	GTAC	2 cut(s)	408, 928
AfeI	AGCGCT	1 cut(s)	1200
AfiI	CCNNNNNNNGG	6 cut(s)	32, 84, 151, 331, 827, 1222
AflII	CTTAAG	1 cut(s)	587
AgsI	TTSAA	4 cut(s)	110, 854, 905, 1066
AhdI	GACNNNNNGTC	1 cut(s)	445
AjiI	CACGTC	1 cut(s)	431
AjnI	CCWGG	3 cut(s)	144, 301, 820
Alw21I	GWGCWC	2 cut(s)	40, 71
AlwI	GGATC	4 cut(s)	112, 604, 713, 1145
AlwNI	CAGNNNCTG	2 cut(s)	605, 722
Ama87I	CYCGRG	2 cut(s)	124, 650
Aor51HI	AGCGCT	1 cut(s)	1200
AoxI	GGCC	2 cut(s)	299, 461
ApeKI	GCWGC	6 cut(s)	155, 560, 746, 1285, 1301, 1310
ApoI	RAATTY	1 cut(s)	905
Asp700I	GAANNNNTTC	1 cut(s)	355
Asp718I	GGTACC	1 cut(s)	926
AspA2I	CCTAGG	1 cut(s)	326
AspLEI	GCGC	2 cut(s)	1201, 1207
AspS9I	GGNCC	2 cut(s)	87, 1213
AsuC2I	CCSGG	1 cut(s)	172
AsuHPI	GGTGA	3 cut(s)	293, 778, 825
AvaI	CYCGRG	2 cut(s)	124, 650
AvaII	GGWCC	2 cut(s)	87, 1213
AvrII	CCTAGG	1 cut(s)	326
BaeGI	GKGCMC	1 cut(s)	716
BanI	GGYRCC	2 cut(s)	711, 926
BanII	GRGCYC	2 cut(s)	40, 571
BauI	CACGAG	1 cut(s)	1208
Bbv12I	GWGCWC	2 cut(s)	40, 71
BbvI	GCAGC	6 cut(s)	167, 572, 758, 1297, 1313, 1322
BccI	CCATC	3 cut(s)	44, 230, 1174
BceAI	ACGGC	1 cut(s)	1273
BciT130I	CCWGG	3 cut(s)	146, 303, 822
BclI	TGATCA	4 cut(s)	418, 664, 685, 973
BcnI	CCSGG	1 cut(s)	172
BfaI	CTAG	4 cut(s)	327, 537, 614, 1107
BfoI	RGCGCY	1 cut(s)	1202
BfrI	CTTAAG	1 cut(s)	587
BfuAI	ACCTGC	3 cut(s)	895, 914, 1275
BglII	AGATCT	1 cut(s)	527
BisI	GCNGC	8 cut(s)	156, 257, 561, 747, 1283, 1286, 1302, 1311
BlnI	CCTAGG	1 cut(s)	326
BlsI	GCNGC	8 cut(s)	157, 258, 562, 748, 1284, 1287, 1303, 1312
Bme1390I	CCNGG	4 cut(s)	146, 172, 303, 822
Bme18I	GGWCC	2 cut(s)	87, 1213
BmeRI	GACNNNNNGTC	1 cut(s)	445
BmeT110I	CYCGRG	2 cut(s)	124, 650
BmgBI	CACGTC	1 cut(s)	431
BmgT120I	GGNCC	2 cut(s)	87, 1213
BmiI	GGNNCC	4 cut(s)	89, 568, 713, 928
BmrFI	CCNGG	4 cut(s)	146, 172, 303, 822
BmrI	ACTGGG	2 cut(s)	393, 948
BmsI	GCATC	3 cut(s)	230, 745, 1288
BmuI	ACTGGG	2 cut(s)	393, 948
BpmI	CTGGAG	2 cut(s)	128, 585
BpuMI	CCSGG	1 cut(s)	172
BsaJI	CCNNGG	5 cut(s)	31, 326, 651, 821, 1138
BsaXI	ACNNNNNCTCC	2 cut(s)	289, 319
Bsc4I	CCNNNNNNNGG	6 cut(s)	32, 84, 151, 331, 827, 1222
Bse1I	ACTGG	3 cut(s)	388, 836, 943
BseBI	CCWGG	3 cut(s)	146, 303, 822
BseDI	CCNNGG	5 cut(s)	31, 326, 651, 821, 1138
BseGI	GGATG	2 cut(s)	245, 976
BseLI	CCNNNNNNNGG	6 cut(s)	32, 84, 151, 331, 827, 1222
BseMII	CTCAG	3 cut(s)	597, 612, 1250
BseNI	ACTGG	3 cut(s)	388, 836, 943
BseRI	GAGGAG	4 cut(s)	61, 64, 91, 237
BseSI	GKGCMC	1 cut(s)	716
BseXI	GCAGC	6 cut(s)	167, 572, 758, 1297, 1313, 1322
BseYI	CCCAGC	1 cut(s)	158
BsgI	GTGCAG	3 cut(s)	170, 533, 1304
Bsh1236I	CGCG	1 cut(s)	1168
Bsh1285I	CGRYCG	1 cut(s)	48
BshFI	GGCC	2 cut(s)	301, 463
BshNI	GGYRCC	2 cut(s)	711, 926
BsiEI	CGRYCG	1 cut(s)	48
BsiHKAI	GWGCWC	2 cut(s)	40, 71
BsiHKCI	CYCGRG	2 cut(s)	124, 650
BsiSI	CCGG	1 cut(s)	171
BslFI	GGGAC	2 cut(s)	400, 1027
BslI	CCNNNNNNNGG	6 cut(s)	32, 84, 151, 331, 827, 1222
BsmFI	GGGAC	2 cut(s)	400, 1027
BsnI	GGCC	2 cut(s)	301, 463
BsoBI	CYCGRG	2 cut(s)	124, 650
Bsp1286I	GDGCHC	4 cut(s)	40, 71, 571, 716
BspACI	CCGC	6 cut(s)	121, 257, 818, 1011, 1166, 1283
BspANI	GGCC	2 cut(s)	301, 463
BspCNI	CTCAG	3 cut(s)	598, 611, 1249
BspFNI	CGCG	1 cut(s)	1168
BspHI	TCATGA	1 cut(s)	367
BspLI	GGNNCC	4 cut(s)	89, 568, 713, 928
BspMI	ACCTGC	3 cut(s)	895, 914, 1275
BspPI	GGATC	4 cut(s)	112, 604, 713, 1145
BspT107I	GGYRCC	2 cut(s)	711, 926
BspTI	CTTAAG	1 cut(s)	587
BsrBI	CCGCTC	1 cut(s)	259
BsrI	ACTGG	3 cut(s)	388, 836, 943
BssECI	CCNNGG	5 cut(s)	31, 326, 651, 821, 1138
BssSI	CACGAG	1 cut(s)	1208
BssT1I	CCWWGG	1 cut(s)	326
Bst2BI	CACGAG	1 cut(s)	1208
Bst2UI	CCWGG	3 cut(s)	146, 303, 822
Bst4CI	ACNGT	1 cut(s)	1102
Bst6I	CTCTTC	1 cut(s)	547
BstAFI	CTTAAG	1 cut(s)	587
BstAPI	GCANNNNNTGC	1 cut(s)	1232
BstC8I	GCNNGC	4 cut(s)	153, 818, 1170, 1203
BstDEI	CTNAG	3 cut(s)	598, 606, 1236
BstDSI	CCRYGG	1 cut(s)	1138
BstEII	GGTNACC	1 cut(s)	281
BstF5I	GGATG	2 cut(s)	245, 976
BstFNI	CGCG	1 cut(s)	1168
BstH2I	RGCGCY	1 cut(s)	1202
BstHHI	GCGC	2 cut(s)	1201, 1207
BstMCI	CGRYCG	1 cut(s)	48
BstMWI	GCNNNNNNNGC	8 cut(s)	566, 755, 863, 1174, 1196, 1232, 1307, 1310
BstNI	CCWGG	3 cut(s)	146, 303, 822
BstNSI	RCATGY	3 cut(s)	348, 473, 801
BstPI	GGTNACC	1 cut(s)	281
BstSCI	CCNGG	4 cut(s)	144, 170, 301, 820
BstSLI	GKGCMC	1 cut(s)	716
BstUI	CGCG	1 cut(s)	1168
BstV1I	GCAGC	6 cut(s)	167, 572, 758, 1297, 1313, 1322
BstX2I	RGATCY	3 cut(s)	527, 609, 718
BstXI	CCANNNNNNTGG	1 cut(s)	497
BstYI	RGATCY	3 cut(s)	527, 609, 718
BsuRI	GGCC	2 cut(s)	301, 463
BtgI	CCRYGG	1 cut(s)	1138
BtrI	CACGTC	1 cut(s)	431
BtsCI	GGATG	2 cut(s)	245, 976
BtsIMutI	CAGTG	3 cut(s)	516, 1107, 1244
BveI	ACCTGC	3 cut(s)	895, 914, 1275
Cac8I	GCNNGC	4 cut(s)	153, 818, 1170, 1203
CaiI	CAGNNNCTG	2 cut(s)	605, 722
CciI	TCATGA	1 cut(s)	367
CfoI	GCGC	2 cut(s)	1201, 1207
Cfr13I	GGNCC	2 cut(s)	87, 1213
Csp6I	GTAC	2 cut(s)	407, 927
CviAII	CATG	7 cut(s)	209, 345, 368, 470, 798, 1051, 1148
CviQI	GTAC	2 cut(s)	407, 927
DdeI	CTNAG	3 cut(s)	598, 606, 1236
DrdI	GACNNNNNNGTC	1 cut(s)	94
DriI	GACNNNNNGTC	1 cut(s)	445
DseDI	GACNNNNNNGTC	1 cut(s)	94
Eam1104I	CTCTTC	1 cut(s)	547
Eam1105I	GACNNNNNGTC	1 cut(s)	445
EarI	CTCTTC	1 cut(s)	547
EciI	GGCGGA	1 cut(s)	110
Ecl136II	GAGCTC	1 cut(s)	38
Eco130I	CCWWGG	1 cut(s)	326
Eco147I	AGGCCT	1 cut(s)	463
Eco24I	GRGCYC	2 cut(s)	40, 571
Eco47I	GGWCC	2 cut(s)	87, 1213
Eco47III	AGCGCT	1 cut(s)	1200
Eco53kI	GAGCTC	1 cut(s)	38
Eco88I	CYCGRG	2 cut(s)	124, 650
Eco91I	GGTNACC	1 cut(s)	281
EcoICRI	GAGCTC	1 cut(s)	38
EcoO65I	GGTNACC	1 cut(s)	281
EcoRII	CCWGG	3 cut(s)	144, 301, 820
EcoT14I	CCWWGG	1 cut(s)	326
EcoT22I	ATGCAT	1 cut(s)	803
EcoT38I	GRGCYC	2 cut(s)	40, 571
ErhI	CCWWGG	1 cut(s)	326
FaeI	CATG	7 cut(s)	212, 348, 371, 473, 801, 1054, 1151
FalI	AAGNNNNNCTT	2 cut(s)	270, 302
FaqI	GGGAC	2 cut(s)	400, 1027
FatI	CATG	7 cut(s)	208, 344, 367, 469, 797, 1050, 1147
FauI	CCCGC	2 cut(s)	825, 1004
FauNDI	CATATG	1 cut(s)	1245
FbaI	TGATCA	4 cut(s)	418, 664, 685, 973
Fnu4HI	GCNGC	8 cut(s)	156, 257, 561, 747, 1283, 1286, 1302, 1311
FokI	GGATG	2 cut(s)	252, 983
FriOI	GRGCYC	2 cut(s)	40, 571
Fsp4HI	GCNGC	8 cut(s)	156, 257, 561, 747, 1283, 1286, 1302, 1311
FspBI	CTAG	4 cut(s)	327, 537, 614, 1107
GlaI	GCGC	2 cut(s)	1200, 1206
GluI	GCNGC	8 cut(s)	156, 257, 561, 747, 1283, 1286, 1302, 1311
GsaI	CCCAGC	1 cut(s)	162
GsuI	CTGGAG	2 cut(s)	128, 585
HaeII	RGCGCY	1 cut(s)	1202
HaeIII	GGCC	2 cut(s)	301, 463
HapII	CCGG	1 cut(s)	171
HhaI	GCGC	2 cut(s)	1201, 1207
Hin1II	CATG	7 cut(s)	212, 348, 371, 473, 801, 1054, 1151
Hin6I	GCGC	2 cut(s)	1199, 1205
HinP1I	GCGC	2 cut(s)	1199, 1205
HinfI	GANTC	3 cut(s)	175, 203, 310
HpaII	CCGG	1 cut(s)	171
HphI	GGTGA	3 cut(s)	293, 778, 825
Hpy166II	GTNNAC	3 cut(s)	833, 947, 1213
Hpy188I	TCNGA	7 cut(s)	35, 79, 87, 309, 423, 506, 690
Hpy188III	TCNNGA	7 cut(s)	360, 368, 600, 650, 722, 988, 1262
Hpy8I	GTNNAC	3 cut(s)	833, 947, 1213
HpyAV	CCTTC	5 cut(s)	288, 325, 365, 474, 763
HpyCH4III	ACNGT	1 cut(s)	1102
HpyCH4IV	ACGT	1 cut(s)	430
HpyF10VI	GCNNNNNNNGC	8 cut(s)	566, 755, 863, 1174, 1196, 1232, 1307, 1310
HpyF3I	CTNAG	3 cut(s)	598, 606, 1236
HpySE526I	ACGT	1 cut(s)	430
Hsp92II	CATG	7 cut(s)	212, 348, 371, 473, 801, 1054, 1151
HspAI	GCGC	2 cut(s)	1199, 1205
KpnI	GGTACC	1 cut(s)	930
Ksp22I	TGATCA	4 cut(s)	418, 664, 685, 973
LmnI	GCTCC	4 cut(s)	35, 43, 74, 566
Lsp1109I	GCAGC	6 cut(s)	167, 572, 758, 1297, 1313, 1322
LweI	GCATC	3 cut(s)	230, 745, 1288
MaeI	CTAG	4 cut(s)	327, 537, 614, 1107
MaeII	ACGT	1 cut(s)	430
MaeIII	GTNAC	5 cut(s)	187, 281, 376, 793, 1102
MbiI	CCGCTC	1 cut(s)	259
MboII	GAAGA	5 cut(s)	74, 281, 522, 564, 748
MfeI	CAATTG	2 cut(s)	546, 1080
MflI	RGATCY	3 cut(s)	527, 609, 718
MhlI	GDGCHC	4 cut(s)	40, 71, 571, 716
MluCI	AATT	9 cut(s)	110, 231, 315, 393, 546, 656, 811, 905, 1080
MlyI	GAGTC	1 cut(s)	319
MmeI	TCCRAC	1 cut(s)	65
Mph1103I	ATGCAT	1 cut(s)	803
MroXI	GAANNNNTTC	1 cut(s)	355
MseI	TTAA	2 cut(s)	588, 935
MslI	CAYNNNNRTG	4 cut(s)	183, 213, 954, 1049
MspA1I	CMGCKG	2 cut(s)	158, 563
MspCI	CTTAAG	1 cut(s)	587
MspI	CCGG	1 cut(s)	171
MspR9I	CCNGG	4 cut(s)	146, 172, 303, 822
MunI	CAATTG	2 cut(s)	546, 1080
MvaI	CCWGG	3 cut(s)	146, 303, 822
MvnI	CGCG	1 cut(s)	1168
MwoI	GCNNNNNNNGC	8 cut(s)	566, 755, 863, 1174, 1196, 1232, 1307, 1310
NciI	CCSGG	1 cut(s)	172
NdeI	CATATG	1 cut(s)	1245
NlaIII	CATG	7 cut(s)	212, 348, 371, 473, 801, 1054, 1151
NlaIV	GGNNCC	4 cut(s)	89, 568, 713, 928
NmuCI	GTSAC	4 cut(s)	281, 376, 793, 1102
NsiI	ATGCAT	1 cut(s)	803
NspI	RCATGY	3 cut(s)	348, 473, 801
PagI	TCATGA	1 cut(s)	367
PceI	AGGCCT	1 cut(s)	463
PdmI	GAANNNNTTC	1 cut(s)	355
PfeI	GAWTC	2 cut(s)	175, 203
PflMI	CCANNNNNTGG	2 cut(s)	827, 1222
PkrI	GCNGC	8 cut(s)	157, 258, 562, 748, 1284, 1287, 1303, 1312
PleI	GAGTC	1 cut(s)	318
PpsI	GAGTC	1 cut(s)	318
Psp124BI	GAGCTC	1 cut(s)	40
Psp6I	CCWGG	3 cut(s)	144, 301, 820
PspEI	GGTNACC	1 cut(s)	281
PspFI	CCCAGC	1 cut(s)	158
PspGI	CCWGG	3 cut(s)	144, 301, 820
PspN4I	GGNNCC	4 cut(s)	89, 568, 713, 928
PspPI	GGNCC	2 cut(s)	87, 1213
PstNI	CAGNNNCTG	2 cut(s)	605, 722
PsuI	RGATCY	3 cut(s)	527, 609, 718
PvuII	CAGCTG	2 cut(s)	158, 563
RsaI	GTAC	2 cut(s)	408, 928
RsaNI	GTAC	2 cut(s)	407, 927
RseI	CAYNNNNRTG	4 cut(s)	183, 213, 954, 1049
SacI	GAGCTC	1 cut(s)	40
SaqAI	TTAA	2 cut(s)	588, 935
SatI	GCNGC	8 cut(s)	156, 257, 561, 747, 1283, 1286, 1302, 1311
Sau96I	GGNCC	2 cut(s)	87, 1213
SchI	GAGTC	1 cut(s)	319
ScrFI	CCNGG	4 cut(s)	146, 172, 303, 822
SduI	GDGCHC	4 cut(s)	40, 71, 571, 716
SfaNI	GCATC	3 cut(s)	230, 745, 1288
SinI	GGWCC	2 cut(s)	87, 1213
SmiMI	CAYNNNNRTG	4 cut(s)	183, 213, 954, 1049
SmlI	CTYRAG	1 cut(s)	587
SmoI	CTYRAG	1 cut(s)	587
Sse9I	AATT	9 cut(s)	110, 231, 315, 393, 546, 656, 811, 905, 1080
SseBI	AGGCCT	1 cut(s)	463
SsiI	CCGC	6 cut(s)	121, 257, 818, 1011, 1166, 1283
SspMI	CTAG	4 cut(s)	327, 537, 614, 1107
SstI	GAGCTC	1 cut(s)	40
StuI	AGGCCT	1 cut(s)	463
StyD4I	CCNGG	4 cut(s)	144, 170, 301, 820
StyI	CCWWGG	1 cut(s)	326
TaaI	ACNGT	1 cut(s)	1102
TaiI	ACGT	1 cut(s)	433
TaqI	TCGA	2 cut(s)	313, 478
TaqII	GACCGA	1 cut(s)	62
TasI	AATT	9 cut(s)	110, 231, 315, 393, 546, 656, 811, 905, 1080
TauI	GCSGC	2 cut(s)	259, 1285
TfiI	GAWTC	2 cut(s)	175, 203
Tru1I	TTAA	2 cut(s)	588, 935
Tru9I	TTAA	2 cut(s)	588, 935
TscAI	CASTG	3 cut(s)	516, 1107, 1244
TseFI	GTSAC	4 cut(s)	281, 376, 793, 1102
TseI	GCWGC	6 cut(s)	155, 560, 746, 1285, 1301, 1310
Tsp45I	GTSAC	4 cut(s)	281, 376, 793, 1102
TspDTI	ATGAA	3 cut(s)	356, 384, 623
TspGWI	ACGGA	2 cut(s)	94, 253
TspRI	CASTG	3 cut(s)	516, 1107, 1244
Van91I	CCANNNNNTGG	2 cut(s)	827, 1222
Vha464I	CTTAAG	1 cut(s)	587
VpaK11BI	GGWCC	2 cut(s)	87, 1213
XapI	RAATTY	1 cut(s)	905
XceI	RCATGY	3 cut(s)	348, 473, 801
XmaJI	CCTAGG	1 cut(s)	326
XmnI	GAANNNNTTC	1 cut(s)	355
XspI	CTAG	4 cut(s)	327, 537, 614, 1107
Zsp2I	ATGCAT	1 cut(s)	803

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.